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The data in this dataset has the promoter sequences and the corresponding gene expression data as TPM values for **26 Maize NAM lines** and has been used for the finetuning step *(for the downstream task of gene expression prediction)* of [`Florabert`](https://huggingface.co/Gurveer05/FloraBERT).
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The data has been split into train, test and eval data (70-20-10 split). In all, there are ~ 7,00,000 entries across the files. The steps followed to obtain this data are available in this [`Github Repository`](https://github.com/gurveervirk/florabert).
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The data in this dataset has the promoter sequences and the corresponding gene expression data as TPM values for **26 Maize NAM lines** and has been used for the finetuning step *(for the downstream task of gene expression prediction)* of [`Florabert`](https://huggingface.co/Gurveer05/FloraBERT).
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The data has been split into train, test and eval data (70-20-10 split). In all, there are ~ 7,00,000 entries across the files. The steps followed to obtain this data are available in this [`Github Repository`](https://github.com/gurveervirk/florabert).
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The labels correspond to the TPM values for the various tissues in the order: [
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'tassel',
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'base',
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'anther',
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'middle',
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'ear',
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'shoot',
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'tip',
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'root'
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]. The sequences that have been used are the promoter sequences for genes of Maize NAM lines that have at least 1 TPM value for a tissue > 1.
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