tjaffri commited on
Commit
9b07480
•
1 Parent(s): fbab5ad

Initial explore notebook

Browse files
Files changed (3) hide show
  1. .gitignore +1 -0
  2. README.md +5 -0
  3. explore.ipynb +316 -0
.gitignore ADDED
@@ -0,0 +1 @@
 
 
1
+ temp/
README.md CHANGED
@@ -1,3 +1,8 @@
1
  ---
2
  license: mit
3
  ---
 
 
 
 
 
 
1
  ---
2
  license: mit
3
  ---
4
+
5
+ # Contextual Semantic Labels (Large) Benchmark Dataset
6
+
7
+ Please see https://github.com/docugami/DFM-benchmarks for more details, eval code, and current scores for different models.
8
+
explore.ipynb ADDED
@@ -0,0 +1,316 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "cells": [
3
+ {
4
+ "attachments": {},
5
+ "cell_type": "markdown",
6
+ "metadata": {},
7
+ "source": [
8
+ "# Explore Dataset: docugami/dfm-csl-large-benchmark\n",
9
+ "\n",
10
+ "See [README](./README.md) for more information"
11
+ ]
12
+ },
13
+ {
14
+ "cell_type": "code",
15
+ "execution_count": 8,
16
+ "metadata": {},
17
+ "outputs": [],
18
+ "source": [
19
+ "DATASET_NAME=\"Docugami/dfm-csl-large-benchmark\""
20
+ ]
21
+ },
22
+ {
23
+ "cell_type": "code",
24
+ "execution_count": 7,
25
+ "metadata": {},
26
+ "outputs": [
27
+ {
28
+ "name": "stdout",
29
+ "output_type": "stream",
30
+ "text": [
31
+ "Requirement already satisfied: datasets in /usr/local/lib/python3.9/dist-packages (2.12.0)\n",
32
+ "Requirement already satisfied: huggingface_hub in /usr/local/lib/python3.9/dist-packages (0.14.1)\n",
33
+ "Requirement already satisfied: ipywidgets in /usr/local/lib/python3.9/dist-packages (8.0.6)\n",
34
+ "Requirement already satisfied: pyarrow>=8.0.0 in /usr/local/lib/python3.9/dist-packages (from datasets) (12.0.0)\n",
35
+ "Requirement already satisfied: xxhash in /usr/local/lib/python3.9/dist-packages (from datasets) (3.2.0)\n",
36
+ "Requirement already satisfied: packaging in /root/.local/lib/python3.9/site-packages (from datasets) (23.1)\n",
37
+ "Requirement already satisfied: dill<0.3.7,>=0.3.0 in /usr/local/lib/python3.9/dist-packages (from datasets) (0.3.6)\n",
38
+ "Requirement already satisfied: tqdm>=4.62.1 in /usr/local/lib/python3.9/dist-packages (from datasets) (4.65.0)\n",
39
+ "Requirement already satisfied: aiohttp in /usr/local/lib/python3.9/dist-packages (from datasets) (3.8.4)\n",
40
+ "Requirement already satisfied: fsspec[http]>=2021.11.1 in /usr/local/lib/python3.9/dist-packages (from datasets) (2023.5.0)\n",
41
+ "Requirement already satisfied: responses<0.19 in /usr/local/lib/python3.9/dist-packages (from datasets) (0.18.0)\n",
42
+ "Requirement already satisfied: pyyaml>=5.1 in /usr/local/lib/python3.9/dist-packages (from datasets) (6.0)\n",
43
+ "Requirement already satisfied: requests>=2.19.0 in /usr/local/lib/python3.9/dist-packages (from datasets) (2.31.0)\n",
44
+ "Requirement already satisfied: multiprocess in /usr/local/lib/python3.9/dist-packages (from datasets) (0.70.14)\n",
45
+ "Requirement already satisfied: numpy>=1.17 in /usr/local/lib/python3.9/dist-packages (from datasets) (1.24.3)\n",
46
+ "Requirement already satisfied: pandas in /usr/local/lib/python3.9/dist-packages (from datasets) (2.0.1)\n",
47
+ "Requirement already satisfied: filelock in /usr/local/lib/python3.9/dist-packages (from huggingface_hub) (3.12.0)\n",
48
+ "Requirement already satisfied: typing-extensions>=3.7.4.3 in /root/.local/lib/python3.9/site-packages (from huggingface_hub) (4.6.2)\n",
49
+ "Requirement already satisfied: ipykernel>=4.5.1 in /root/.local/lib/python3.9/site-packages (from ipywidgets) (6.23.1)\n",
50
+ "Requirement already satisfied: widgetsnbextension~=4.0.7 in /usr/local/lib/python3.9/dist-packages (from ipywidgets) (4.0.7)\n",
51
+ "Requirement already satisfied: traitlets>=4.3.1 in /root/.local/lib/python3.9/site-packages (from ipywidgets) (5.9.0)\n",
52
+ "Requirement already satisfied: jupyterlab-widgets~=3.0.7 in /usr/local/lib/python3.9/dist-packages (from ipywidgets) (3.0.7)\n",
53
+ "Requirement already satisfied: ipython>=6.1.0 in /root/.local/lib/python3.9/site-packages (from ipywidgets) (8.13.2)\n",
54
+ "Requirement already satisfied: frozenlist>=1.1.1 in /usr/local/lib/python3.9/dist-packages (from aiohttp->datasets) (1.3.3)\n",
55
+ "Requirement already satisfied: attrs>=17.3.0 in /usr/local/lib/python3.9/dist-packages (from aiohttp->datasets) (23.1.0)\n",
56
+ "Requirement already satisfied: charset-normalizer<4.0,>=2.0 in /usr/local/lib/python3.9/dist-packages (from aiohttp->datasets) (3.1.0)\n",
57
+ "Requirement already satisfied: yarl<2.0,>=1.0 in /usr/local/lib/python3.9/dist-packages (from aiohttp->datasets) (1.9.2)\n",
58
+ "Requirement already satisfied: aiosignal>=1.1.2 in /usr/local/lib/python3.9/dist-packages (from aiohttp->datasets) (1.3.1)\n",
59
+ "Requirement already satisfied: async-timeout<5.0,>=4.0.0a3 in /usr/local/lib/python3.9/dist-packages (from aiohttp->datasets) (4.0.2)\n",
60
+ "Requirement already satisfied: multidict<7.0,>=4.5 in /usr/local/lib/python3.9/dist-packages (from aiohttp->datasets) (6.0.4)\n",
61
+ "Requirement already satisfied: psutil in /root/.local/lib/python3.9/site-packages (from ipykernel>=4.5.1->ipywidgets) (5.9.5)\n",
62
+ "Requirement already satisfied: jupyter-core!=5.0.*,>=4.12 in /root/.local/lib/python3.9/site-packages (from ipykernel>=4.5.1->ipywidgets) (5.3.0)\n",
63
+ "Requirement already satisfied: jupyter-client>=6.1.12 in /root/.local/lib/python3.9/site-packages (from ipykernel>=4.5.1->ipywidgets) (8.2.0)\n",
64
+ "Requirement already satisfied: matplotlib-inline>=0.1 in /root/.local/lib/python3.9/site-packages (from ipykernel>=4.5.1->ipywidgets) (0.1.6)\n",
65
+ "Requirement already satisfied: tornado>=6.1 in /root/.local/lib/python3.9/site-packages (from ipykernel>=4.5.1->ipywidgets) (6.3.2)\n",
66
+ "Requirement already satisfied: comm>=0.1.1 in /root/.local/lib/python3.9/site-packages (from ipykernel>=4.5.1->ipywidgets) (0.1.3)\n",
67
+ "Requirement already satisfied: nest-asyncio in /root/.local/lib/python3.9/site-packages (from ipykernel>=4.5.1->ipywidgets) (1.5.6)\n",
68
+ "Requirement already satisfied: debugpy>=1.6.5 in /root/.local/lib/python3.9/site-packages (from ipykernel>=4.5.1->ipywidgets) (1.6.7)\n",
69
+ "Requirement already satisfied: pyzmq>=20 in /root/.local/lib/python3.9/site-packages (from ipykernel>=4.5.1->ipywidgets) (25.1.0)\n",
70
+ "Requirement already satisfied: stack-data in /root/.local/lib/python3.9/site-packages (from ipython>=6.1.0->ipywidgets) (0.6.2)\n",
71
+ "Requirement already satisfied: backcall in /root/.local/lib/python3.9/site-packages (from ipython>=6.1.0->ipywidgets) (0.2.0)\n",
72
+ "Requirement already satisfied: prompt-toolkit!=3.0.37,<3.1.0,>=3.0.30 in /root/.local/lib/python3.9/site-packages (from ipython>=6.1.0->ipywidgets) (3.0.38)\n",
73
+ "Requirement already satisfied: pickleshare in /root/.local/lib/python3.9/site-packages (from ipython>=6.1.0->ipywidgets) (0.7.5)\n",
74
+ "Requirement already satisfied: pexpect>4.3 in /root/.local/lib/python3.9/site-packages (from ipython>=6.1.0->ipywidgets) (4.8.0)\n",
75
+ "Requirement already satisfied: jedi>=0.16 in /root/.local/lib/python3.9/site-packages (from ipython>=6.1.0->ipywidgets) (0.18.2)\n",
76
+ "Requirement already satisfied: pygments>=2.4.0 in /root/.local/lib/python3.9/site-packages (from ipython>=6.1.0->ipywidgets) (2.15.1)\n",
77
+ "Requirement already satisfied: decorator in /root/.local/lib/python3.9/site-packages (from ipython>=6.1.0->ipywidgets) (5.1.1)\n",
78
+ "Requirement already satisfied: urllib3<3,>=1.21.1 in /usr/local/lib/python3.9/dist-packages (from requests>=2.19.0->datasets) (2.0.2)\n",
79
+ "Requirement already satisfied: idna<4,>=2.5 in /usr/local/lib/python3.9/dist-packages (from requests>=2.19.0->datasets) (3.4)\n",
80
+ "Requirement already satisfied: certifi>=2017.4.17 in /usr/local/lib/python3.9/dist-packages (from requests>=2.19.0->datasets) (2023.5.7)\n",
81
+ "Requirement already satisfied: tzdata>=2022.1 in /usr/local/lib/python3.9/dist-packages (from pandas->datasets) (2023.3)\n",
82
+ "Requirement already satisfied: python-dateutil>=2.8.2 in /root/.local/lib/python3.9/site-packages (from pandas->datasets) (2.8.2)\n",
83
+ "Requirement already satisfied: pytz>=2020.1 in /usr/local/lib/python3.9/dist-packages (from pandas->datasets) (2023.3)\n",
84
+ "Requirement already satisfied: parso<0.9.0,>=0.8.0 in /root/.local/lib/python3.9/site-packages (from jedi>=0.16->ipython>=6.1.0->ipywidgets) (0.8.3)\n",
85
+ "Requirement already satisfied: importlib-metadata>=4.8.3 in /root/.local/lib/python3.9/site-packages (from jupyter-client>=6.1.12->ipykernel>=4.5.1->ipywidgets) (6.6.0)\n",
86
+ "Requirement already satisfied: platformdirs>=2.5 in /root/.local/lib/python3.9/site-packages (from jupyter-core!=5.0.*,>=4.12->ipykernel>=4.5.1->ipywidgets) (3.5.1)\n",
87
+ "Requirement already satisfied: ptyprocess>=0.5 in /root/.local/lib/python3.9/site-packages (from pexpect>4.3->ipython>=6.1.0->ipywidgets) (0.7.0)\n",
88
+ "Requirement already satisfied: wcwidth in /root/.local/lib/python3.9/site-packages (from prompt-toolkit!=3.0.37,<3.1.0,>=3.0.30->ipython>=6.1.0->ipywidgets) (0.2.6)\n",
89
+ "Requirement already satisfied: six>=1.5 in /root/.local/lib/python3.9/site-packages (from python-dateutil>=2.8.2->pandas->datasets) (1.16.0)\n",
90
+ "Requirement already satisfied: pure-eval in /root/.local/lib/python3.9/site-packages (from stack-data->ipython>=6.1.0->ipywidgets) (0.2.2)\n",
91
+ "Requirement already satisfied: executing>=1.2.0 in /root/.local/lib/python3.9/site-packages (from stack-data->ipython>=6.1.0->ipywidgets) (1.2.0)\n",
92
+ "Requirement already satisfied: asttokens>=2.1.0 in /root/.local/lib/python3.9/site-packages (from stack-data->ipython>=6.1.0->ipywidgets) (2.2.1)\n",
93
+ "Requirement already satisfied: zipp>=0.5 in /root/.local/lib/python3.9/site-packages (from importlib-metadata>=4.8.3->jupyter-client>=6.1.12->ipykernel>=4.5.1->ipywidgets) (3.15.0)\n",
94
+ "\u001b[33mWARNING: Running pip as the 'root' user can result in broken permissions and conflicting behaviour with the system package manager. It is recommended to use a virtual environment instead: https://pip.pypa.io/warnings/venv\u001b[0m\u001b[33m\n",
95
+ "\u001b[0m"
96
+ ]
97
+ },
98
+ {
99
+ "data": {
100
+ "application/vnd.jupyter.widget-view+json": {
101
+ "model_id": "c5591c50842d4a6f99800ce774776236",
102
+ "version_major": 2,
103
+ "version_minor": 0
104
+ },
105
+ "text/plain": [
106
+ "VBox(children=(HTML(value='<center> <img\\nsrc=https://huggingface.co/front/assets/huggingface_logo-noborder.sv…"
107
+ ]
108
+ },
109
+ "metadata": {},
110
+ "output_type": "display_data"
111
+ }
112
+ ],
113
+ "source": [
114
+ "# install dependencies and get a token\n",
115
+ "!pip install datasets huggingface_hub ipywidgets\n",
116
+ "\n",
117
+ "from huggingface_hub import notebook_login\n",
118
+ "notebook_login()\n"
119
+ ]
120
+ },
121
+ {
122
+ "attachments": {},
123
+ "cell_type": "markdown",
124
+ "metadata": {},
125
+ "source": [
126
+ "# Update Dataset from Github\n",
127
+ "Note: this requires write access to the dataset."
128
+ ]
129
+ },
130
+ {
131
+ "cell_type": "code",
132
+ "execution_count": 9,
133
+ "metadata": {},
134
+ "outputs": [
135
+ {
136
+ "name": "stdout",
137
+ "output_type": "stream",
138
+ "text": [
139
+ "--2023-05-29 19:03:22-- https://raw.githubusercontent.com/docugami/DFM-benchmarks/main/data/annotations/CSL-Large.csv\n",
140
+ "Resolving raw.githubusercontent.com (raw.githubusercontent.com)... 185.199.111.133, 185.199.110.133, 185.199.108.133, ...\n",
141
+ "Connecting to raw.githubusercontent.com (raw.githubusercontent.com)|185.199.111.133|:443... connected.\n",
142
+ "HTTP request sent, awaiting response... 200 OK\n",
143
+ "Length: 1130946 (1.1M) [text/plain]\n",
144
+ "Saving to: ‘./temp/CSL-Large.csv.1’\n",
145
+ "\n",
146
+ "CSL-Large.csv.1 100%[===================>] 1.08M 5.72MB/s in 0.2s \n",
147
+ "\n",
148
+ "2023-05-29 19:03:23 (5.72 MB/s) - ‘./temp/CSL-Large.csv.1’ saved [1130946/1130946]\n",
149
+ "\n"
150
+ ]
151
+ }
152
+ ],
153
+ "source": [
154
+ "# download latest CSV from github\n",
155
+ "!wget -P ./temp https://raw.githubusercontent.com/docugami/DFM-benchmarks/main/data/annotations/CSL-Large.csv"
156
+ ]
157
+ },
158
+ {
159
+ "cell_type": "code",
160
+ "execution_count": 10,
161
+ "metadata": {},
162
+ "outputs": [
163
+ {
164
+ "name": "stdout",
165
+ "output_type": "stream",
166
+ "text": [
167
+ "Downloading and preparing dataset csv/default to /root/.cache/huggingface/datasets/csv/default-386db05c8f0598e0/0.0.0...\n"
168
+ ]
169
+ },
170
+ {
171
+ "data": {
172
+ "application/vnd.jupyter.widget-view+json": {
173
+ "model_id": "63298c1dcbd642468f3cc580bcc80297",
174
+ "version_major": 2,
175
+ "version_minor": 0
176
+ },
177
+ "text/plain": [
178
+ "Downloading data files: 0%| | 0/1 [00:00<?, ?it/s]"
179
+ ]
180
+ },
181
+ "metadata": {},
182
+ "output_type": "display_data"
183
+ },
184
+ {
185
+ "data": {
186
+ "application/vnd.jupyter.widget-view+json": {
187
+ "model_id": "4d2d9eec67e64fcba634c69f2453beaf",
188
+ "version_major": 2,
189
+ "version_minor": 0
190
+ },
191
+ "text/plain": [
192
+ "Extracting data files: 0%| | 0/1 [00:00<?, ?it/s]"
193
+ ]
194
+ },
195
+ "metadata": {},
196
+ "output_type": "display_data"
197
+ },
198
+ {
199
+ "data": {
200
+ "application/vnd.jupyter.widget-view+json": {
201
+ "model_id": "69c7b2b3090a488bad506b66496105c4",
202
+ "version_major": 2,
203
+ "version_minor": 0
204
+ },
205
+ "text/plain": [
206
+ "Generating train split: 0 examples [00:00, ? examples/s]"
207
+ ]
208
+ },
209
+ "metadata": {},
210
+ "output_type": "display_data"
211
+ },
212
+ {
213
+ "name": "stdout",
214
+ "output_type": "stream",
215
+ "text": [
216
+ "Dataset csv downloaded and prepared to /root/.cache/huggingface/datasets/csv/default-386db05c8f0598e0/0.0.0. Subsequent calls will reuse this data.\n"
217
+ ]
218
+ },
219
+ {
220
+ "data": {
221
+ "application/vnd.jupyter.widget-view+json": {
222
+ "model_id": "0c719935d3824027b1caa3260bcbbf1e",
223
+ "version_major": 2,
224
+ "version_minor": 0
225
+ },
226
+ "text/plain": [
227
+ "Pushing dataset shards to the dataset hub: 0%| | 0/1 [00:00<?, ?it/s]"
228
+ ]
229
+ },
230
+ "metadata": {},
231
+ "output_type": "display_data"
232
+ },
233
+ {
234
+ "data": {
235
+ "application/vnd.jupyter.widget-view+json": {
236
+ "model_id": "fb17ac28c0044959bf19f24a8c33e2a0",
237
+ "version_major": 2,
238
+ "version_minor": 0
239
+ },
240
+ "text/plain": [
241
+ "Creating parquet from Arrow format: 0%| | 0/2 [00:00<?, ?ba/s]"
242
+ ]
243
+ },
244
+ "metadata": {},
245
+ "output_type": "display_data"
246
+ },
247
+ {
248
+ "data": {
249
+ "application/vnd.jupyter.widget-view+json": {
250
+ "model_id": "a0cc1556120a41dfaa6fa36c07cb67c2",
251
+ "version_major": 2,
252
+ "version_minor": 0
253
+ },
254
+ "text/plain": [
255
+ "Upload 1 LFS files: 0%| | 0/1 [00:00<?, ?it/s]"
256
+ ]
257
+ },
258
+ "metadata": {},
259
+ "output_type": "display_data"
260
+ },
261
+ {
262
+ "data": {
263
+ "application/vnd.jupyter.widget-view+json": {
264
+ "model_id": "d24bc578be9347eba62f452e489cb568",
265
+ "version_major": 2,
266
+ "version_minor": 0
267
+ },
268
+ "text/plain": [
269
+ "Downloading metadata: 0%| | 0.00/21.0 [00:00<?, ?B/s]"
270
+ ]
271
+ },
272
+ "metadata": {},
273
+ "output_type": "display_data"
274
+ }
275
+ ],
276
+ "source": [
277
+ "from datasets import Dataset\n",
278
+ "\n",
279
+ "# Load the data from the csv\n",
280
+ "dataset = Dataset.from_csv('./temp/CSL-Large.csv')\n",
281
+ "\n",
282
+ "# Push the dataset to the Hugging Face Hub\n",
283
+ "dataset.push_to_hub(DATASET_NAME, split=\"eval\")"
284
+ ]
285
+ },
286
+ {
287
+ "cell_type": "code",
288
+ "execution_count": null,
289
+ "metadata": {},
290
+ "outputs": [],
291
+ "source": []
292
+ }
293
+ ],
294
+ "metadata": {
295
+ "kernelspec": {
296
+ "display_name": "Python 3",
297
+ "language": "python",
298
+ "name": "python3"
299
+ },
300
+ "language_info": {
301
+ "codemirror_mode": {
302
+ "name": "ipython",
303
+ "version": 3
304
+ },
305
+ "file_extension": ".py",
306
+ "mimetype": "text/x-python",
307
+ "name": "python",
308
+ "nbconvert_exporter": "python",
309
+ "pygments_lexer": "ipython3",
310
+ "version": "3.9.16"
311
+ },
312
+ "orig_nbformat": 4
313
+ },
314
+ "nbformat": 4,
315
+ "nbformat_minor": 2
316
+ }