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<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="UTF-8">
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>Genomic Sequence Search</title>
<link rel="preconnect" href="https://fonts.googleapis.com">
<link rel="preconnect" href="https://fonts.gstatic.com" crossorigin>
<link href="https://fonts.googleapis.com/css2?family=JetBrains+Mono:wght@400;500;600&family=Outfit:wght@300;400;500;600;700&display=swap" rel="stylesheet">
<style>
:root {
--bg-primary: #0a0a0b;
--bg-secondary: #111113;
--bg-tertiary: #18181b;
--bg-hover: #1f1f23;
--border: #27272a;
--border-focus: #3f3f46;
--text-primary: #fafafa;
--text-secondary: #a1a1aa;
--text-muted: #71717a;
--accent: #10b981;
--accent-dim: #059669;
--accent-glow: rgba(16, 185, 129, 0.15);
--dna-a: #22d3ee;
--dna-t: #f472b6;
--dna-c: #a78bfa;
--dna-g: #fbbf24;
--success: #4ade80;
--error: #f87171;
--gradient-1: linear-gradient(135deg, #10b981 0%, #22d3ee 100%);
--radius-sm: 6px;
--radius-md: 10px;
--radius-lg: 16px;
}
* {
margin: 0;
padding: 0;
box-sizing: border-box;
}
body {
font-family: 'Outfit', -apple-system, BlinkMacSystemFont, sans-serif;
background: var(--bg-primary);
color: var(--text-primary);
min-height: 100vh;
line-height: 1.6;
}
body::before {
content: '';
position: fixed;
top: 0;
left: 0;
right: 0;
bottom: 0;
background-image:
linear-gradient(rgba(16, 185, 129, 0.03) 1px, transparent 1px),
linear-gradient(90deg, rgba(16, 185, 129, 0.03) 1px, transparent 1px);
background-size: 40px 40px;
pointer-events: none;
z-index: 0;
}
.container {
max-width: 1000px;
margin: 0 auto;
padding: 2rem;
position: relative;
z-index: 1;
}
header {
text-align: center;
padding: 2rem 0 1.5rem;
}
.logo {
display: inline-flex;
align-items: center;
gap: 0.75rem;
margin-bottom: 0.75rem;
}
.logo-icon {
width: 52px;
height: 52px;
background: var(--gradient-1);
border-radius: var(--radius-md);
display: flex;
align-items: center;
justify-content: center;
font-size: 1.75rem;
}
h1 {
font-size: 2.25rem;
font-weight: 600;
letter-spacing: -0.03em;
background: var(--gradient-1);
-webkit-background-clip: text;
-webkit-text-fill-color: transparent;
background-clip: text;
}
.subtitle {
color: var(--text-secondary);
font-size: 1rem;
font-weight: 300;
margin-top: 0.25rem;
}
.stats-bar {
display: flex;
justify-content: center;
gap: 2.5rem;
padding: 1rem 0;
margin-bottom: 1.5rem;
border-bottom: 1px solid var(--border);
}
.stat {
text-align: center;
}
.stat-value {
font-family: 'JetBrains Mono', monospace;
font-size: 1.25rem;
font-weight: 500;
color: var(--accent);
}
.stat-label {
font-size: 0.7rem;
color: var(--text-muted);
text-transform: uppercase;
letter-spacing: 0.08em;
margin-top: 0.2rem;
}
.search-section {
background: var(--bg-secondary);
border: 1px solid var(--border);
border-radius: var(--radius-lg);
padding: 1.5rem;
margin-bottom: 1.5rem;
}
.search-label {
display: block;
font-size: 0.85rem;
font-weight: 500;
color: var(--text-secondary);
margin-bottom: 0.75rem;
}
.search-textarea {
width: 100%;
min-height: 120px;
padding: 1rem;
font-family: 'JetBrains Mono', monospace;
font-size: 0.9rem;
background: var(--bg-primary);
border: 1px solid var(--border);
border-radius: var(--radius-md);
color: var(--text-primary);
resize: vertical;
transition: all 0.2s ease;
line-height: 1.6;
}
.search-textarea:focus {
outline: none;
border-color: var(--accent);
box-shadow: 0 0 0 3px var(--accent-glow);
}
.search-textarea::placeholder {
color: var(--text-muted);
}
.search-controls {
display: flex;
justify-content: space-between;
align-items: center;
margin-top: 1rem;
gap: 1rem;
}
.char-count {
font-family: 'JetBrains Mono', monospace;
font-size: 0.8rem;
color: var(--text-muted);
}
.search-actions {
display: flex;
gap: 0.75rem;
align-items: center;
}
.top-k-select {
padding: 0.6rem 0.75rem;
background: var(--bg-tertiary);
border: 1px solid var(--border);
border-radius: var(--radius-sm);
color: var(--text-primary);
font-family: inherit;
font-size: 0.85rem;
cursor: pointer;
}
.search-btn {
padding: 0.75rem 2rem;
background: var(--gradient-1);
border: none;
border-radius: var(--radius-md);
color: var(--bg-primary);
font-family: inherit;
font-size: 0.95rem;
font-weight: 600;
cursor: pointer;
transition: all 0.2s ease;
}
.search-btn:hover {
opacity: 0.9;
transform: scale(1.02);
}
.search-btn:disabled {
opacity: 0.5;
cursor: not-allowed;
transform: none;
}
.clear-btn {
padding: 0.6rem 1rem;
background: transparent;
border: 1px solid var(--border);
border-radius: var(--radius-sm);
color: var(--text-secondary);
font-family: inherit;
font-size: 0.85rem;
cursor: pointer;
transition: all 0.2s ease;
}
.clear-btn:hover {
border-color: var(--border-focus);
color: var(--text-primary);
}
.results-container {
margin-top: 1rem;
}
.results-header {
display: flex;
justify-content: space-between;
align-items: center;
margin-bottom: 1rem;
padding-bottom: 0.75rem;
border-bottom: 1px solid var(--border);
}
.results-count {
color: var(--text-secondary);
font-size: 0.9rem;
}
.results-count strong {
color: var(--text-primary);
}
.result-card {
background: var(--bg-secondary);
border: 1px solid var(--border);
border-radius: var(--radius-md);
padding: 1.25rem;
margin-bottom: 0.75rem;
transition: all 0.2s ease;
animation: slideIn 0.3s ease forwards;
opacity: 0;
transform: translateY(10px);
}
.result-card:hover {
border-color: var(--border-focus);
background: var(--bg-tertiary);
}
@keyframes slideIn {
to {
opacity: 1;
transform: translateY(0);
}
}
.result-header {
display: flex;
justify-content: space-between;
align-items: center;
margin-bottom: 0.75rem;
}
.result-rank {
display: inline-flex;
align-items: center;
justify-content: center;
width: 32px;
height: 32px;
background: var(--bg-primary);
border-radius: var(--radius-sm);
font-family: 'JetBrains Mono', monospace;
font-size: 0.85rem;
font-weight: 600;
color: var(--text-secondary);
}
.result-rank.top-3 {
background: var(--accent-glow);
color: var(--accent);
}
.result-score {
font-family: 'JetBrains Mono', monospace;
font-size: 0.85rem;
color: var(--accent);
background: var(--accent-glow);
padding: 0.3rem 0.85rem;
border-radius: var(--radius-sm);
}
.result-sequence {
font-family: 'JetBrains Mono', monospace;
font-size: 0.85rem;
color: var(--text-primary);
background: var(--bg-primary);
padding: 0.85rem 1rem;
border-radius: var(--radius-sm);
margin-bottom: 0.75rem;
word-break: break-all;
line-height: 1.7;
max-height: 120px;
overflow-y: auto;
letter-spacing: 0.5px;
}
.result-metadata {
display: flex;
flex-wrap: wrap;
gap: 0.5rem;
}
.metadata-tag {
display: inline-flex;
align-items: center;
gap: 0.4rem;
padding: 0.35rem 0.75rem;
background: var(--bg-primary);
border-radius: var(--radius-sm);
font-size: 0.8rem;
}
.metadata-key {
color: var(--text-muted);
}
.metadata-value {
color: var(--text-secondary);
font-family: 'JetBrains Mono', monospace;
max-width: 200px;
overflow: hidden;
text-overflow: ellipsis;
white-space: nowrap;
}
.loading {
display: flex;
flex-direction: column;
align-items: center;
justify-content: center;
gap: 1rem;
padding: 3rem;
color: var(--text-secondary);
}
.spinner {
width: 32px;
height: 32px;
border: 3px solid var(--border);
border-top-color: var(--accent);
border-radius: 50%;
animation: spin 0.8s linear infinite;
}
@keyframes spin {
to { transform: rotate(360deg); }
}
.message {
padding: 1rem 1.25rem;
border-radius: var(--radius-md);
margin-bottom: 1rem;
font-size: 0.9rem;
}
.message.error {
background: rgba(248, 113, 113, 0.1);
border: 1px solid rgba(248, 113, 113, 0.2);
color: var(--error);
}
.message.info {
background: rgba(16, 185, 129, 0.1);
border: 1px solid rgba(16, 185, 129, 0.2);
color: var(--accent);
}
.empty-state {
text-align: center;
padding: 4rem 2rem;
color: var(--text-muted);
}
.empty-state-icon {
font-size: 3.5rem;
margin-bottom: 1rem;
opacity: 0.4;
}
.empty-state p {
font-size: 1rem;
}
.example-queries {
margin-top: 1.5rem;
}
.example-queries h4 {
font-size: 0.8rem;
color: var(--text-muted);
text-transform: uppercase;
letter-spacing: 0.05em;
margin-bottom: 0.75rem;
}
.example-btn {
display: inline-block;
padding: 0.5rem 1rem;
margin: 0.25rem;
background: var(--bg-tertiary);
border: 1px solid var(--border);
border-radius: var(--radius-sm);
color: var(--text-secondary);
font-family: 'JetBrains Mono', monospace;
font-size: 0.75rem;
cursor: pointer;
transition: all 0.2s ease;
}
.example-btn:hover {
border-color: var(--accent);
color: var(--accent);
}
@media (max-width: 640px) {
.container {
padding: 1rem;
}
h1 {
font-size: 1.5rem;
}
.stats-bar {
gap: 1.5rem;
}
.search-controls {
flex-direction: column;
align-items: stretch;
}
.search-actions {
justify-content: space-between;
}
}
</style>
</head>
<body>
<div class="container">
<header>
<div class="logo">
<div class="logo-icon">🧬</div>
</div>
<h1>Genomic Sequence Search</h1>
<p class="subtitle">Find similar sequences using transformer embeddings</p>
</header>
<div class="stats-bar">
<div class="stat">
<div class="stat-value" id="doc-count"></div>
<div class="stat-label">Sequences</div>
</div>
<div class="stat">
<div class="stat-value" id="dim-count"></div>
<div class="stat-label">Dimensions</div>
</div>
<div class="stat">
<div class="stat-value" id="device-info"></div>
<div class="stat-label">Device</div>
</div>
</div>
<div id="message-container"></div>
<div class="search-section">
<label class="search-label">Enter a genomic sequence to search:</label>
<textarea
class="search-textarea"
id="search-input"
placeholder="Paste your genomic sequence here (e.g., ATCGATCGATCG...)"
spellcheck="false"
></textarea>
<div class="search-controls">
<span class="char-count"><span id="char-count">0</span> characters</span>
<div class="search-actions">
<button class="clear-btn" onclick="clearSearch()">Clear</button>
<select class="top-k-select" id="top-k">
<option value="5">Top 5</option>
<option value="10" selected>Top 10</option>
<option value="20">Top 20</option>
<option value="50">Top 50</option>
</select>
<button class="search-btn" id="search-btn" onclick="search()">
Search
</button>
</div>
</div>
</div>
<div class="results-container" id="results-container">
<div class="empty-state">
<div class="empty-state-icon">🔬</div>
<p>Enter a sequence above to find similar matches</p>
<div class="example-queries">
<h4>Try an example</h4>
<button class="example-btn" onclick="loadExample('ATCGATCGATCGATCGATCG')">ATCGATCG...</button>
<button class="example-btn" onclick="loadExample('GCTAGCTAGCTAGCTAGCTA')">GCTAGCTA...</button>
<button class="example-btn" onclick="loadExample('AAAATTTTCCCCGGGGAAAA')">AAAATTTT...</button>
</div>
</div>
</div>
</div>
<script>
const API_BASE = '';
document.addEventListener('DOMContentLoaded', () => {
loadStats();
const input = document.getElementById('search-input');
input.addEventListener('input', updateCharCount);
input.addEventListener('keydown', (e) => {
if (e.key === 'Enter' && e.ctrlKey) {
search();
}
});
});
async function loadStats() {
try {
const res = await fetch(`${API_BASE}/api/stats`);
if (res.ok) {
const data = await res.json();
document.getElementById('doc-count').textContent = data.total_documents.toLocaleString();
document.getElementById('dim-count').textContent = data.embedding_dimension;
document.getElementById('device-info').textContent = data.device.toUpperCase();
}
} catch (e) {
console.log('Could not load stats:', e);
}
}
function updateCharCount() {
const count = document.getElementById('search-input').value.length;
document.getElementById('char-count').textContent = count.toLocaleString();
}
function clearSearch() {
document.getElementById('search-input').value = '';
updateCharCount();
document.getElementById('results-container').innerHTML = `
<div class="empty-state">
<div class="empty-state-icon">🔬</div>
<p>Enter a sequence above to find similar matches</p>
<div class="example-queries">
<h4>Try an example</h4>
<button class="example-btn" onclick="loadExample('ATCGATCGATCGATCGATCG')">ATCGATCG...</button>
<button class="example-btn" onclick="loadExample('GCTAGCTAGCTAGCTAGCTA')">GCTAGCTA...</button>
<button class="example-btn" onclick="loadExample('AAAATTTTCCCCGGGGAAAA')">AAAATTTT...</button>
</div>
</div>
`;
}
function loadExample(seq) {
document.getElementById('search-input').value = seq;
updateCharCount();
search();
}
async function search() {
const query = document.getElementById('search-input').value.trim();
if (!query) {
showMessage('Please enter a sequence to search', 'error');
return;
}
const topK = parseInt(document.getElementById('top-k').value);
const container = document.getElementById('results-container');
const searchBtn = document.getElementById('search-btn');
container.innerHTML = `
<div class="loading">
<div class="spinner"></div>
<span>Encoding sequence and searching...</span>
</div>
`;
searchBtn.disabled = true;
try {
const res = await fetch(`${API_BASE}/api/search`, {
method: 'POST',
headers: { 'Content-Type': 'application/json' },
body: JSON.stringify({ query, top_k: topK })
});
const data = await res.json();
if (!res.ok) {
container.innerHTML = `<div class="message error">${data.detail}</div>`;
return;
}
if (data.results.length === 0) {
container.innerHTML = `
<div class="empty-state">
<div class="empty-state-icon">🤷</div>
<p>No similar sequences found</p>
</div>
`;
return;
}
container.innerHTML = `
<div class="results-header">
<span class="results-count">Found <strong>${data.results.length}</strong> similar sequences</span>
<span class="results-count">from ${data.total_indexed.toLocaleString()} indexed</span>
</div>
${data.results.map((r, i) => `
<div class="result-card" style="animation-delay: ${i * 0.04}s">
<div class="result-header">
<span class="result-rank ${r.rank <= 3 ? 'top-3' : ''}">${r.rank}</span>
<span class="result-score">${(r.score * 100).toFixed(2)}%</span>
</div>
<div class="result-sequence">${escapeHtml(r.sequence)}</div>
<div class="result-metadata">
${Object.entries(r.metadata)
.filter(([k]) => !k.startsWith('__'))
.slice(0, 8)
.map(([k, v]) => `
<span class="metadata-tag">
<span class="metadata-key">${escapeHtml(k)}:</span>
<span class="metadata-value" title="${escapeHtml(String(v))}">${escapeHtml(String(v).slice(0, 50))}</span>
</span>
`).join('')}
</div>
</div>
`).join('')}
`;
} catch (e) {
container.innerHTML = `<div class="message error">Search failed: ${e.message}</div>`;
} finally {
searchBtn.disabled = false;
}
}
function showMessage(text, type = 'info') {
const container = document.getElementById('message-container');
container.innerHTML = `<div class="message ${type}">${text}</div>`;
setTimeout(() => container.innerHTML = '', 4000);
}
function escapeHtml(text) {
const div = document.createElement('div');
div.textContent = text;
return div.innerHTML;
}
</script>
</body>
</html>