NofPmids
float64
1
96
NofSnps
float64
0
1.07k
associationType
stringclasses
3 values
diseaseId
stringlengths
8
12
diseaseName
stringclasses
587 values
diseaseType
stringclasses
3 values
disease_mention
stringlengths
1
89
geneId
stringlengths
1
30
geneSymbol
stringlengths
2
10
gene_mention
stringlengths
2
69
originalSource
stringclasses
1 value
pmid
int64
104k
28.2M
raw_sentence
stringlengths
39
1.09k
score
float64
0.2
1
sentence
stringlengths
143
948
source
stringclasses
9 values
null
null
Negative
MESH:D054069
null
null
EMA
4313
null
MMP2
null
28,020,743
RESULTS: The SVM model integrates three clinicopathologic features (tumor diameter, preoperative hemoglobin level, adjuvant chemotherapy ) and 24 immunomarkers (Survivin, cmyc, CD44v6, MMP7, CK19, P16, PTEN, TIMP1, CyclinE, MMP2, SMAD4, VEGF, MUC2, Ecadherin, Her2, CK20, P27, APC, CD147, cmet, COX2, CDX2, MGMT, EMA).
null
null
null
null
null
Negative
MESH:D057772
null
null
vascular injury
66549
null
Aggf1
null
28,153,879
We investigated the involvement of angiogenic factor with G patch and FHA domains 1 (Aggf1) in vascular injury focusing on the transcriptional regulation of vascular smooth muscle cell signature genes.
null
null
null
1
0
Biomarker
C0024115
Lung diseases
group
lung disease
6648
SOD2
MnSOD
CTD_human
8,063,194
Thus, elevations of MnSOD mRNA levels in lung or BAL may be predictive of lung disease.
0.200549
Thus, elevations of <span class="gene" id="8063194-8-20-25">MnSOD</span> mRNA levels in lung or BAL may be predictive of <span class="disease" id="8063194-8-74-86">lung disease</span>.
CTD_human
null
null
Negative
MESH:D035583
null
null
rare disease
2688
null
growth hormone
null
28,025,719
UNASSIGNED: Acromegaly, a rare disease due to growth hormone (GH) hypersecretion by a pituitary adenoma, is associated with severe comorbidity and premature death if not adequately treated.
null
null
null
null
null
Negative
MESH:D050177
null
null
overweight
2641
null
glucagon-like peptide-1
null
28,074,747
The following key terms were used alone or in combination: glucagon-like peptide-1 agonist, liraglutide, obesity, overweight, and weight loss.
null
null
null
null
null
Negative
MESH:C563733
null
null
Carotid intima-media thickness
404677
null
CIMT
null
28,150,294
BACKGROUND: Carotid intima-media thickness (CIMT) has been proposed as a surrogate marker of atherosclerotic disease.
null
null
null
null
null
Negative
MESH:D004194
null
null
MF/MC disease
2064
null
HER2
null
28,136,627
HIV-infected patients with breast cancer presented with more HER2 positivity, higher grade, less favorable luminal B subtype, and more MF/MC disease.
null
null
null
1
0
Biomarker
C0017636
Glioblastoma
disease
GBM
4853
NOTCH2
Notch2
CTD_human
21,127,729
Knockdown of individual Notch receptors revealed that Notch1 and Notch2 receptors differentially contributed to GBM cell growth, with Notch2 having a predominant role.
0.201648
Knockdown of individual Notch receptors revealed that Notch1 and <span class="gene" id="21127729-5-65-71">Notch2</span> receptors differentially contributed to <span class="disease" id="21127729-5-112-115">GBM</span> cell growth, with <span class="gene" id="21127729-5-134-140">Notch2</span> having a predominant role.
CTD_human
4
1
Biomarker
C1956346
Coronary Artery Disease
disease
coronary artery disease
4846
NOS3
endothelial nitric oxide synthase
CTD_human
10,510,054
A common variant of the endothelial nitric oxide synthase (Glu298-->Asp) is a major risk factor for coronary artery disease in the UK.
0.321301
A common variant of the <span class="gene" id="10510054-0-24-57">endothelial nitric oxide synthase</span> (Glu298--&gt;Asp) is a major risk factor for <span class="disease" id="10510054-0-100-123">coronary artery disease</span> in the UK.
CTD_human
2
0
Biomarker
C0023418
leukemia
disease
leukaemia
4297
KMT2A
MLL
CTD_human
12,937,054
A single case is described of congenital leukaemia with 11q23/MLL rearrangement in a preterm female newborn.
0.320342
A single case is described of congenital <span class="disease" id="12937054-1-41-50">leukaemia</span> with 11q23/<span class="gene" id="12937054-1-62-65">MLL</span> rearrangement in a preterm female newborn.
CTD_human
10
3
Biomarker
C0030567
Parkinson Disease
disease
Parkinson's disease
120892
LRRK2
leucine-rich repeat kinase 2
CTD_human
17,388,990
A common leucine-rich repeat kinase 2 gene mutation in familial and sporadic Parkinson's disease in Russia.
0.44
A common <span class="gene" id="17388990-0-9-37">leucine-rich repeat kinase 2</span> gene mutation in familial and sporadic <span class="disease" id="17388990-0-77-96">Parkinson's disease</span> in Russia.
CTD_human
null
null
Negative
MESH:C535607
null
null
AGS
8743
null
tumor necrosis factor-related apoptosis-inducing ligand
null
28,074,048
Compounds 1-6 were evaluated for their abilities to overcome tumor necrosis factor-related apoptosis-inducing ligand (TRAIL) resistance in human gastric adenocarcinoma (AGS) cells.
null
null
null
null
null
Negative
MESH:D004827
null
null
epilepsy
114244
null
hyperpolarization-activated cyclic nucleotide-gated ion channel 2
null
28,017,718
Interestingly, one of the purified proteins was potassium/sodium hyperpolarization-activated cyclic nucleotide-gated ion channel 2 (HCN2), which has been shown to be involved in epilepsy.
null
null
null
null
null
Negative
MESH:D052476
null
null
deficiency of apolipoprotein
18751
null
PKCb
null
28,210,689
Interestingly, a deficiency of apolipoprotein E abrogated the diet-induced hepatic PKCb expression, whereas a deficiency of liver X receptor-a further potentiated the induction, suggesting a potential link between the degree of hepatic PKCb induction and the intracellular cholesterol content.
null
null
null
1
4
Biomarker
C0010068
Coronary heart disease
disease
coronary heart disease
4018
LPA
apolipoprotein(a
CTD_human
10,484,779
High plasma concentrations of lipoprotein(a) [Lp(a)], a covalent low-density lipoprotein-apolipoprotein(a) [apo(a)] complex, are associated with coronary heart disease and stroke.
0.252051
High plasma concentrations of <span class="gene" id="10484779-1-30-43">lipoprotein(a</span>) [Lp(a)], a covalent low-density lipoprotein-<span class="gene" id="10484779-1-89-105">apolipoprotein(a</span>) [apo(a)] complex, are associated with <span class="disease" id="10484779-1-145-167">coronary heart disease</span> and stroke.
CTD_human
null
null
Negative
MESH:D005671
null
null
double hexamer
990
null
Cdc6
null
28,191,894
During G1 phase, two Cdt1-Mcm2-7 heptamers are loaded onto each replication origin by the origin-recognition complex (ORC) and Cdc6 to form an inactive MCM double hexamer (DH), but the detailed loading mechanism remains unclear.
null
null
null
null
null
Negative
MESH:D008103
null
null
liver fibrosis
17250
null
MRP1
null
28,098,912
In conclusion, the present study demonstrated that miR-9 suppresses the proliferation and activation of HSCs through the Hh pathway by targeting MRP1, which suggests that miR-9 has therapeutic potential for liver fibrosis.
null
null
null
1
0
Biomarker
C0004352
Autistic Disorder
disease
autism
4915
NTRK2
NTRK2
CTD_human
20,662,941
Increased BDNF levels and NTRK2 gene association suggest a disruption of BDNF/TrkB signaling in autism.
0.202682
Increased BDNF levels and <span class="gene" id="20662941-0-26-31">NTRK2</span> gene association suggest a disruption of BDNF/TrkB signaling in <span class="disease" id="20662941-0-96-102">autism</span>.
CTD_human
3
0
Biomarker
C0598608
Hyperhomocysteinemia
disease
hyperhomocysteinemia
875
CBS
CBS
CTD_human
19,028,542
We have recently demonstrated that the supplementation of catechin, a polyphenol found in the red wine, significantly reduced plasma homocysteine level in cystathionine beta synthase (CBS) deficient mice, a murine model of hyperhomocysteinemia.
0.229249
We have recently demonstrated that the supplementation of catechin, a polyphenol found in the red wine, significantly reduced plasma homocysteine level in <span class="gene" id="19028542-3-155-182">cystathionine beta synthase</span> (<span class="gene" id="19028542-3-184-187">CBS</span>) deficient mice, a murine model of <span class="disease" id="19028542-3-223-243">hyperhomocysteinemia</span>.
CTD_human
null
null
Negative
MESH:D006332
null
null
cardiac hypertrophy
24179
null
Ang II
null
28,095,237
In this study we examined the effect of candesartan, an Ang II type 1-(AT1)-receptor antagonist, on cardiac hypertrophy by using cultured neonatal rat cardiomyocytes.
null
null
null
1
0
Biomarker
C0036572
Seizures
phenotype
seizure
1191
CLU
clusterin
CTD_human
23,266,720
The results of the present study suggest that E-64d, an elective inhibitor of calpain and autophagy, is potentially useful in the treatment of developmental seizure-induced brain damage both by regulating abnormal zinc signal transduction and through the modulation of altered lipid metabolism via ApoE/clusterin pathway in hippocampus.
0.2
The results of the present study suggest that E-64d, an elective inhibitor of calpain and autophagy, is potentially useful in the treatment of developmental <span class="disease" id="23266720-11-157-164">seizure</span>-induced brain damage both by regulating abnormal zinc signal transduction and through the modulation of altered lipid metabolism via ApoE/<span class="gene" id="23266720-11-303-312">clusterin</span> pathway in hippocampus.
CTD_human
null
null
Negative
MESH:D001168
null
null
arthritis
228869
null
CIA
null
28,013,195
Finally, we investigated the effects of systemic nicotine exposure on arthritis severity and NETosis in the CIA mouse model.
null
null
null
null
null
Negative
MESH:D007249
null
null
allergic airway inflammation
282665
null
Ovalbumin
null
28,129,681
Ovalbumin was administered intraperitoneally and via inhalation to achieve allergic airway inflammation mice model and treatments were also given intraperitoneally.
null
null
null
null
null
Negative
MESH:D002524
null
null
cerebellar ataxia type-1
12287
null
b-III
null
28,173,092
Clinical phenotypes of spinocerebellar ataxia type-5 (SCA5) and spectrin-associated autosomal recessive cerebellar ataxia type-1 (SPARCA1) are mirrored in mice lacking b-III spectrin (b-III-/-).
null
null
null
null
null
Negative
MESH:C536528
null
null
cardiorespiratory condition
3479
null
IGF-I
null
28,011,098
The body composition and cardiorespiratory condition of the swimmers did not vary significantly throughout the season, exhibiting behaviour independent of IGF-I or IGFBP-3.
null
null
null
null
null
Negative
MESH:D013717
null
null
tenosynovitis
3972
null
LHB
null
28,043,748
PURPOSE: The objective of this study was to assess the outcomes after subpectoral biceps tenodesis (BT) for long head of the biceps (LHB) tenosynovitis in active patients <45 years old.
null
null
null
null
null
Negative
MESH:D012640
null
null
seizure
382056
null
mTORC1
null
28,199,315
Here we show that SZT2 (seizure threshold 2), a metazoan-specific protein mutated in epilepsy, recruits a fraction of mammalian GATOR1 and GATOR2 to form a SZT2-orchestrated GATOR (SOG) complex with an essential role in GATOR- and SESN-dependent nutrient sensing and mTORC1 regulation.
null
null
null
4
0
Biomarker
C0038220
Status Epilepticus
disease
status epilepticus
847
CAT
catalase
CTD_human
15,752,349
Our results suggest that GSH and catalase activity play an antioxidant role in the hippocampus during status epilepticus.
0.2
Our results suggest that GSH and <span class="gene" id="15752349-10-33-41">catalase</span> activity play an antioxidant role in the hippocampus during <span class="disease" id="15752349-10-102-120">status epilepticus</span>.
CTD_human
null
null
Negative
MESH:D005355
null
null
fibrosis
17087
null
MD2
null
28,013,347
Using a specific small molecule MD2 blocker L6H21 and the MD2 knockout mice, we show that MD2 deficiency significantly reduces cardiac inflammation and subsequent fibrosis, hypertrophy, and dysfunction in mice challenged with subcutaneous injection of Ang II.
null
null
null
1
0
Biomarker
C0021841
Intestinal Neoplasms
group
intestinal tumors
596
BCL2
Bcl-2
CTD_human
10,223,192
Relationship of beta-catenin and Bcl-2 expression to sulindac-induced regression of intestinal tumors in Min mice.
0.200275
Relationship of beta-catenin and <span class="gene" id="10223192-0-33-38">Bcl-2</span> expression to sulindac-induced regression of <span class="disease" id="10223192-0-84-101">intestinal tumors</span> in Min mice.
CTD_human
null
null
Negative
MESH:D016776
null
null
Blastocystis
81502
null
spp
null
28,167,596
AbstractThis study was conducted to investigate the prevalence of Blastocystis spp.
null
null
null
null
null
Negative
MESH:D005671
null
null
double mutant mice
13198
null
CHOP
null
28,139,216
We hypothesized that adult offspring of double mutant mice (DM) involving the critical ISR genes CHOP and GADD34 would be protected from developing obesity and insulin resistance following SF.
null
null
null
17
19
Biomarker
C0162568
Erythropoietic Protoporphyria
disease
EPP
2235
FECH
FECH
CTD_human
12,950,064
Erythropoietic protoporphyria (EPP) is an inherited disease characterised by a ferrochelatase (FECH) deficiency, the latest enzyme of the heme biosynthetic pathway, leading to the accumulation of toxic protoporphyrin in the liver, bone marrow and spleen.
0.730919
<span class="disease" id="12950064-1-0-29">Erythropoietic protoporphyria</span> (<span class="disease" id="12950064-1-31-34">EPP</span>) is an inherited disease characterised by a <span class="gene" id="12950064-1-79-93">ferrochelatase</span> (<span class="gene" id="12950064-1-95-99">FECH</span>) deficiency, the latest enzyme of the heme biosynthetic pathway, leading to the accumulation of toxic protoporphyrin in the liver, bone marrow and spleen.
CTD_human;ORPHANET;UNIPROT
1
0
Biomarker
C0018784
Sensorineural Hearing Loss (disorder)
disease
sensorineural hearing impairment
2707
GJB3
D66del
CTD_human
11,309,368
We report here a dominant mutation in the GJB3 gene (D66del) in a family affected with peripheral neuropathy and sensorineural hearing impairment.
0.401374
We report here a dominant mutation in the <span class="gene" id="11309368-2-42-46">GJB3</span> gene (<span class="gene" id="11309368-2-53-59">D66del</span>) in a family affected with peripheral neuropathy and <span class="disease" id="11309368-2-113-145">sensorineural hearing impairment</span>.
CTD_human;HPO
null
null
Negative
MESH:D008107
null
null
liver inflammation
16176
null
IL-1b
null
28,167,322
MCC950 treatment normalized hepatic caspase 1 and IL-1b expression, plasma IL-1b, MCP-1 and IL-6, lowered ALT/AST, and reduced the severity of liver inflammation including designation as NASH pathology, and liver fibrosis.
null
null
null
null
null
Negative
MESH:D007511
null
null
ischemia
245920
null
CXCL10
null
28,187,734
RESULTS: SB treatment-reduced brain damage, as assessed by HE staining, suppressed the production of inflammatory markers-IL-1b, chemokine CXCL10, and blocked ischemia-elicited upregulation of COX-2 in the damaged ipsilateral hemisphere.
null
null
null
null
null
Negative
MESH:D001927
null
null
histological cryptococcoma-like lesions
21926
null
TNF-a
null
28,074,867
Severe cryptococcosis in the FcyRIIb-/- mice was demonstrated by high fungal burdens in the internal organs with histological cryptococcoma-like lesions and high levels of TNF-a and IL-6, but not IL-10.
null
null
null
1
0
Biomarker
C0011860
Diabetes Mellitus, Non-Insulin-Dependent
disease
type 2 diabetes
23411
SIRT1
SIRT1
CTD_human
23,834,033
The miR-34a/NAMPT axis presents a potential target for treating obesity- and aging-related diseases involving SIRT1 dysfunction like steatosis and type 2 diabetes.
0.292441
The miR-34a/NAMPT axis presents a potential target for treating obesity- and aging-related diseases involving <span class="gene" id="23834033-13-110-115">SIRT1</span> dysfunction like steatosis and <span class="disease" id="23834033-13-147-162">type 2 diabetes</span>.
CTD_human
null
null
Negative
MESH:D011471
null
null
initiation of prostate carcinogenesis
16000
null
IGF-I
null
28,142,953
CONCLUSIONS: Our data suggest that initiation of prostate carcinogenesis by loss of PTEN is not influenced by germ line variation of genes encoding signaling molecules in the GH/IGF-I axis, but suggests that such factors may affect the progression of dysplasic phenotype.
null
null
null
null
null
Negative
MESH:C538322
null
null
MSI-H
4292
null
MLH1
null
28,021,974
MMR status had been analyzed, and deficient MMR was defined as MSI-H or loss of MLH1, MSH2 and/or MSH6 proteins by IHC.
null
null
null
null
null
Negative
MESH:D003398
null
null
Syndromic craniosynostosis
14183
null
FGFR2
null
28,069,589
Syndromic craniosynostosis caused by mutations in FGFR2 is characterised by developmental pathology in both endochondral and membranous skeletogenesis.
null
null
null
null
null
Negative
MESH:D006333
null
null
decreased cardiac function
19014
null
mediator subunit 1
null
28,159,809
Cardiac-specific deletion of the transcriptional coactivator mediator subunit 1 (Med1) results in dilated cardiomyopathy, decreased cardiac function, and lethality.
null
null
null
2
16
Biomarker
C0342907
Sitosterolemia
disease
sitosterolemia
64241
ABCG8
ABCG8
CTD_human
11,099,417
We identified seven different mutations in two adjacent, oppositely oriented genes that encode new members of the adenosine triphosphate (ATP)-binding cassette (ABC) transporter family (six mutations in ABCG8 and one in ABCG5) in nine patients with sitosterolemia.
0.684945
We identified seven different mutations in two adjacent, oppositely oriented genes that encode new members of the adenosine triphosphate (ATP)-binding cassette (ABC) transporter family (six mutations in <span class="gene" id="11099417-3-203-208">ABCG8</span> and one in ABCG5) in nine patients with <span class="disease" id="11099417-3-249-263">sitosterolemia</span>.
CTD_human;ORPHANET;UNIPROT
1
0
Biomarker
C2239176
Liver carcinoma
disease
HCC
5218
CDK14
CDK14
CTD_human
22,922,871
The results suggest that seven of these genes, including VCAM1 and CDK14, may confer growth and infiltration capacity to HCC cells.
0.201099
The results suggest that seven of these genes, including VCAM1 and <span class="gene" id="22922871-7-67-72">CDK14</span>, may confer growth and infiltration capacity to <span class="disease" id="22922871-7-121-124">HCC</span> cells.
CTD_human
1
0
Biomarker
C0031900
Pierre Robin Syndrome
disease
Pierre Robin sequence
6662
SOX9
SOX9
CTD_human
19,234,473
Highly conserved non-coding elements on either side of SOX9 associated with Pierre Robin sequence.
0.403022
Highly conserved non-coding elements on either side of <span class="gene" id="19234473-0-55-59">SOX9</span> associated with <span class="disease" id="19234473-0-76-97">Pierre Robin sequence</span>.
CTD_human;ORPHANET
null
null
Negative
MESH:D000172
null
null
acromegaly
2696
null
GIPR
null
28,179,449
Given the impairment of the GIP/GIPR axis in acromegaly, an additional aim was to assess the effect of GH/IGF-1 stimulation on GIP expression in the enteroendocrine cell line STC-1.
null
null
null
1
0
Biomarker
C0003469
Anxiety Disorders
group
anxiety
6532
SLC6A4
5-HTTLPR
CTD_human
18,686,203
These findings suggest that within this restricted population increased symptoms of depression, anxiety, and memory are associated with the 5-HTTLPR polymorphism among both males and females.
0.268785
These findings suggest that within this restricted population increased symptoms of depression, <span class="disease" id="18686203-11-96-103">anxiety</span>, and memory are associated with the <span class="gene" id="18686203-11-140-148">5-HTTLPR</span> polymorphism among both males and females.
CTD_human
null
null
Negative
MESH:D030342
null
null
MIP
2064
null
HER2
null
28,125,801
We examined 42 primary breast cancers with known HR and HER2 status assessed via immunohistochemistry and FISH and analyzed MIP microarray results for correlation with standard tests and survival outcomes.
null
null
null
null
null
Negative
MESH:D012174
null
null
retinitis pigmentosa
1121
null
choroideremia
null
28,009,400
PURPOSE: To report a real-life experience with the Argus II retinal prosthesis system in blind patients with end-stage retinitis pigmentosa (RP) or choroideremia (CHM), focusing on the pivotal role of optical coherence tomography (OCT) in both preoperative and postoperative management.
null
null
null
1
0
Biomarker
C1510586
Autism Spectrum Disorders
disease
ASD
23462
HEY1
HEY1
CTD_human
20,868,653
Our analysis identified several novel dysregulated genes and miRNAs in ASD compared with controls, including HEY1, SOX9, miR-486 and miR-181b.
0.2
Our analysis identified several novel dysregulated genes and miRNAs in <span class="disease" id="20868653-6-71-74">ASD</span> compared with controls, including <span class="gene" id="20868653-6-109-113">HEY1</span>, SOX9, miR-486 and miR-181b.
CTD_human
3
0
Biomarker
C0011881
Diabetic Nephropathy
disease
diabetic nephropathy
84735
CNDP1
carnosinase 1
CTD_human
17,942,768
These complimentary approaches have demonstrated that polymorphisms in the carnosinase 1 gene on chromosome 18q, the adiponectin gene on 3q, and the engulfment and cell motility gene on 7p are likely associated with susceptibility to diabetic nephropathy.
0.228187
These complimentary approaches have demonstrated that polymorphisms in the <span class="gene" id="17942768-5-75-88">carnosinase 1</span> gene on chromosome 18q, the adiponectin gene on 3q, and the engulfment and cell motility gene on 7p are likely associated with susceptibility to <span class="disease" id="17942768-5-234-254">diabetic nephropathy</span>.
CTD_human
null
null
Negative
MESH:D007249
null
null
inflammation
3569;3586
null
interleukin-6, and -10
null
28,079,606
MEASUREMENTS AND MAIN RESULTS: We measured a panel of biomarkers representing four pathophysiologic domains: "inflammation" (tumor necrosis factor, interleukin-6, and -10); "coagulation" (D-dimers, thrombin-antithrombin complex); "oxidative stress" (urine isoprostane); and "tissue hypoxia" (lactate) at 0, 6, 24, and 72 hours after treatment.
null
null
null
null
null
Negative
MESH:D009175
null
null
Mycoplasma
24088
null
Toll-like receptor 2
null
28,139,935
Mycoplasma and Gram-positive bacteria, for which Toll-like receptor 2 (TLR2) plays a key role in recognition and inflammatory response, are among the most common pathogens in the perinatal period.
null
null
null
1
0
Biomarker
C0041296
Tuberculosis
disease
tuberculosis
3240
HP
haptoglobin
CTD_human
16,597,321
Iron and infection: effects of host iron status and the iron-regulatory genes haptoglobin and NRAMP1 (SLC11A1) on host-pathogen interactions in tuberculosis and HIV.
0.203557
Iron and infection: effects of host iron status and the iron-regulatory genes <span class="gene" id="16597321-0-78-89">haptoglobin</span> and NRAMP1 (SLC11A1) on host-pathogen interactions in <span class="disease" id="16597321-0-144-156">tuberculosis</span> and HIV.
CTD_human
null
null
Negative
MESH:C567886
null
null
XPC
7507
null
XPA
null
28,115,302
Thirty-eight polymorphisms in eight NER genes were genotyped by Sequenom MassARRAY platform, including XPA, XPC, DDB2, XPB (ERCC3), XPD (ERCC2), ERCC1, XPF (ERCC4), and XPG (ERCC5).
null
null
null
null
null
Negative
MESH:D010146
null
null
orofacial pain
24807
null
NK-1) receptor
null
28,097,463
Thus, in the present study, we determined whether the neurokinin-1 (NK-1) receptor, which is crucial for primary orofacial pain signaling, was expressed in MDH neurons co-innervating the thalamus and parabrachial nucleus.
null
null
null
1
0
Biomarker
C3711376
Isodicentric Chromosome 15 Syndrome
disease
IDIC-15
2558
GABRA5
GABRA5
CTD_human
23,663,378
Paradoxical worsening of seizure activity with pregabalin in an adult with isodicentric 15 (IDIC-15) syndrome involving duplications of the GABRB3, GABRA5 and GABRG3 genes.
0.2
Paradoxical worsening of seizure activity with pregabalin in an adult with isodicentric 15 (<span class="disease" id="23663378-0-92-99">IDIC-15</span>) syndrome involving duplications of the GABRB3, <span class="gene" id="23663378-0-148-154">GABRA5</span> and GABRG3 genes.
CTD_human
null
null
Negative
MESH:D007333
null
null
insulin resistance
6720;6721
null
Srebf1/2
null
28,146,135
Aspalathin was able to modulate key regulators associated with lipid metabolism (Adipoq, Apob, CD36, Cpt1, Ppary, Srebf1/2, Scd1 and Vldlr), insulin resistance (Igf1, Akt1, Pde3 and Map2k1), inflammation (Il3, Il6, Jak2, Lepr, Socs3, and Tnf13) and apoptosis (Bcl2 and Chuk).
null
null
null
null
null
Negative
MESH:D055371
null
null
ALI
21898
null
TLR4
null
28,099,145
Collectively, the findings reveal that TLR4 mutant significantly abated the intestinal IR injury and ALI at least in part by alleviating the inflammatory response and oxidative stress.
null
null
null
null
null
Negative
MESH:D009128
null
null
spasticity
6094
null
ROM
null
28,145,396
Pain (VAS), ROM (goniometry), spasticity (Modified Ashworth Scale), Fugl-Meyer Assessment and trunk stability (TIS) were also assessed before and after the intervention.
null
null
null
25
0
Biomarker
C0004153
Atherosclerosis
disease
atherosclerosis
348
APOE
apolipoprotein E
CTD_human
9,409,251
Reduced progression of atherosclerosis in apolipoprotein E-deficient mice following consumption of red wine, or its polyphenols quercetin or catechin, is associated with reduced susceptibility of LDL to oxidation and aggregation.
0.587329
Reduced progression of <span class="disease" id="9409251-0-23-38">atherosclerosis</span> in <span class="gene" id="9409251-0-42-58">apolipoprotein E</span>-deficient mice following consumption of red wine, or its polyphenols quercetin or catechin, is associated with reduced susceptibility of LDL to oxidation and aggregation.
CTD_human;HPO
null
null
Negative
MESH:D011475
null
null
overall survival
920
null
CD4
null
28,023,298
Patients with a CD4 count >100 had superior progression free survival (PFS) and overall survival (OS) (p= 0.019, p=0.016).
null
null
null
5
0
Biomarker
C0024121
Lung Neoplasms
group
lung tumors
3265
HRAS
Ha-ras
CTD_human
10,779,650
Carcinogen dose-dependent variation in the transgene mutation spectrum in urethane-induced lung tumors in transgenic mice carrying the human prototype c-Ha-ras gene.
0.201099
Carcinogen dose-dependent variation in the transgene mutation spectrum in urethane-induced <span class="disease" id="10779650-0-91-102">lung tumors</span> in transgenic mice carrying the human prototype c-<span class="gene" id="10779650-0-153-159">Ha-ras</span> gene.
CTD_human
null
null
Negative
MESH:D013274
null
null
gastric cancer
14160
null
LGR5
null
28,033,430
CONCLUSION: The LGR5-expressing fraction of CD54+ cells represents gastric cancer CSCs, in which LGR5 is closely associated with stemness and EMT core genes, and NANOG expression is mainly contributed by the retrogene NANOGP8.
null
null
null
1
0
Biomarker
C0011616
Contact Dermatitis
disease
contact dermatitis
9076
CLDN1
CLDN1
CTD_human
23,136,956
The CLDN1 polymorphisms rs9290927, rs893051 and rs17501010 were associated, respectively, with nickel contact sensitization in individuals without ear piercings, contact sensitization to fragrances, and with both organic compounds and nickel contact dermatitis.
0.200275
The <span class="gene" id="23136956-11-4-9">CLDN1</span> polymorphisms rs9290927, rs893051 and rs17501010 were associated, respectively, with nickel contact sensitization in individuals without ear piercings, contact sensitization to fragrances, and with both organic compounds and nickel <span class="disease" id="23136956-11-242-260">contact dermatitis</span>.
CTD_human
null
null
Negative
MESH:C536108
null
null
N-N bond dissociation
5962
null
RDX
null
28,094,774
Moreover, the rate constants of the gas-phase RDX and HMX conformers, concerning the N-N bond dissociation, were evaluated using the microcanonical variational transition state theory ( VT).
null
null
null
null
null
Negative
MESH:D012778
null
null
short bowel syndrome
2641
null
glucagon-like peptide-2
null
28,194,723
UNASSIGNED: Subcutaneous teduglutide (Revestive( )), a glucagon-like peptide-2 analogue that increases intestinal absorption, is approved in the EU for the treatment of short bowel syndrome (SBS) in patients aged >= 1 year who are stable following a period of postsurgical intestinal adaptation.
null
null
null
null
null
Negative
MESH:D017827
null
null
wild-type
546729
null
Calhm1
null
28,202,574
In this study, we compared membrane conductances and action potentials in single identified TRPM5-GFP-expressing circumvallate papillae type II cells acutely isolated from wild-type (WT) and Calhm1 knockout (KO) mice.
null
null
null
3
0
Biomarker
C0036572
Seizures
phenotype
seizure
627
BDNF
BDNF
CTD_human
15,781,040
PRI-2191 alone had no effect on gene expression, but it enhanced the seizure-evoked expression of HSP-70, had an opposite effect on BDNF mRNA level and did not affect prepro-TRH mRNA level.
0.203571
PRI-2191 alone had no effect on gene expression, but it enhanced the <span class="disease" id="15781040-7-69-76">seizure</span>-evoked expression of HSP-70, had an opposite effect on <span class="gene" id="15781040-7-132-136">BDNF</span> mRNA level and did not affect prepro-TRH mRNA level.
CTD_human
1
0
Therapeutic
C0002736
Amyotrophic Lateral Sclerosis
disease
ALS
51163
DBR1
RNA lariat debranching enzyme
CTD_human
23,104,007
Inhibition of RNA lariat debranching enzyme suppresses TDP-43 toxicity in ALS disease models.
0.200275
Inhibition of <span class="gene" id="23104007-0-14-43">RNA lariat debranching enzyme</span> suppresses TDP-43 toxicity in <span class="disease" id="23104007-0-74-77">ALS</span> disease models.
CTD_human
2
1
Therapeutic
C0003873
Rheumatoid Arthritis
disease
rheumatoid arthritis
3570
IL6R
interleukin-6 receptor
CTD_human
16,729,287
Anti-interleukin-6 receptor antibody therapy favors adrenal androgen secretion in patients with rheumatoid arthritis: a randomized, double-blind, placebo-controlled study.
0.206253
Anti-<span class="gene" id="16729287-0-5-27">interleukin-6 receptor</span> antibody therapy favors adrenal androgen secretion in patients with <span class="disease" id="16729287-0-96-116">rheumatoid arthritis</span>: a randomized, double-blind, placebo-controlled study.
CTD_human
5
0
Biomarker
C0024121
Lung Neoplasms
group
lung tumors
7157
TP53
p53
CTD_human
16,410,370
The incidence of KRAS2 mutations in human compared to mouse lung tumors differed significantly, as did the incidence of Hras and p53 gene mutations in human compared to mouse liver tumors.
0.489685
The incidence of KRAS2 mutations in human compared to mouse <span class="disease" id="16410370-8-60-71">lung tumors</span> differed significantly, as did the incidence of Hras and <span class="gene" id="16410370-8-129-132">p53</span> gene mutations in human compared to mouse liver tumors.
CTD_human
null
null
Negative
MESH:D009369
null
null
inha/Tag adrenal tumors
17391
null
Mmp24
null
28,131,743
Besides earlier reported Gata4 and Lhcgr, we found up-regulated Esr1, Prlr-rs1, and down-regulated Grb10, Mmp24, Sgcd, Rerg, Gnas, Nfatc2, Gnrhr, Igf2 in inha/Tag adrenal tumors.
null
null
null
null
null
Negative
MESH:D004194
null
null
SD
2821
null
Ph I
null
28,022,310
We hypothesized that the application of CTGR and NPI can help identify Ph I pts with SD who derive survival benefit from therapy.
null
null
null
1
0
Biomarker
C0027627
Neoplasm Metastasis
phenotype
metastasis
3082
HGF
HGF
CTD_human
25,971,889
Hepatocyte growth factor (HGF)-mediated activation of c-Met signaling has been suggested as a therapeutic target for melanoma metastasis.
0.240877
<span class="gene" id="25971889-3-0-24">Hepatocyte growth factor</span> (<span class="gene" id="25971889-3-26-29">HGF</span>)-mediated activation of c-Met signaling has been suggested as a therapeutic target for melanoma <span class="disease" id="25971889-3-126-136">metastasis</span>.
CTD_human
null
null
Negative
MESH:D007249
null
null
inflammation
8144
null
MGI
null
28,105,737
Outcomes were measured at baseline and 6 weeks, which included: inflammation (MGI, Lobene), bleeding (PBI, Loesche) and Plaque (Turesky).
null
null
null
1
0
Biomarker
C0033578
Prostatic Neoplasms
group
prostate tumor
3925
STMN1
Stathmin
CTD_human
17,455,228
Stathmin levels increase early during normal mouse prostate development and again during prostate tumor development and progression.
0.200549
<span class="gene" id="17455228-6-0-8">Stathmin</span> levels increase early during normal mouse prostate development and again during <span class="disease" id="17455228-6-89-103">prostate tumor</span> development and progression.
CTD_human
1
0
Biomarker
C0004352
Autistic Disorder
disease
autism
121278
TPH2
TPH2
CTD_human
15,768,392
Possible association between autism and variants in the brain-expressed tryptophan hydroxylase gene (TPH2).
0.215541
Possible association between <span class="disease" id="15768392-0-29-35">autism</span> and variants in the brain-expressed tryptophan hydroxylase gene (<span class="gene" id="15768392-0-101-105">TPH2</span>).
CTD_human
null
null
Negative
MESH:D001260
null
null
T-helper 2
16163
null
IL-13
null
28,078,033
Intravenous injection of BMSCs significantly reduced allergic symptoms, eosinophil infiltration, OVA-specific immunoglobulin E (IgE), T-helper 2 (Th2) cytokine profile (interleukin (IL)-4, IL-5 and IL-13) and regulatory cytokines (IL-10).
null
null
null
null
null
Negative
MESH:D009369
null
null
tumors
214084
null
VMAT2
null
28,213,878
In vivo experiments were performed in nude mice bearing transfected tumors; results revealed that NET-VMAT2-coexpressing tumors had longer (131)I-MIBG retention time than NET-expressing tumors.
null
null
null
null
null
Negative
MESH:D015658
null
null
human immunodeficiency virus type 1
155971
null
glycoprotein 120
null
28,005,232
It is widely accepted that human immunodeficiency virus type 1 (HIV-1) envelope glycoprotein 120 (gp120) plays an important role in HIV-1-induced neural injury and pathogenesis of HIV-1-associated dementia (HAND).
null
null
null
null
null
Negative
MESH:D020295
null
null
Stemness
4233
null
c-MET
null
28,114,366
Stemness features of tumoral hepatocytes (EpCAM, K19, Oct3/4, c-KIT, c-MET, and CD133), and tumor stromal cells expressing a-smooth muscle actin (a-SMA), CD68, CD163, and IL-6 were analyzed in 36 low grade dysplastic nodules (DNs), 48 high grade DNs, 30 early HCCs (eHCCs), and 51 progressed HCCs (pHCCs) by immunohistochemistry or real-time PCR.
null
null
null
null
null
Negative
MESH:C565133
null
null
CCL-2
3553
null
IL1b
null
28,142,894
METHODS: A retrospective analysis of inflammatory markers including IL1b, IL-6, IL-8, TNFa and CCL-2 was undertaken in men initiating ADT for metastatic prostate cancer.
null
null
null
null
null
Negative
MESH:D008175
null
null
lung cancer
561835
null
RICTOR
null
28,028,034
Molecular classification has uncovered a number of novel targets, and rapamycin-insensitive companion of mTOR (RICTOR) amplification has been identified in lung cancer.
null
null
null
null
null
Negative
MESH:D034721
null
null
cutaneous and systemic disease
2235
null
ferrochelatase
null
28,075,030
Erythropoietic protoporphyria (EPP) is a rare cutaneous and systemic disease caused by mutations in the ferrochelatase gene (FECH).
null
null
null
null
null
Negative
MESH:D054973
null
null
melanotic PEComa
7030
null
TFE3
null
28,009,605
Here we describe a case of a melanotic PEComa with NONO-TFE3 fusion occurring in the sinonasal mucosa, as demonstrated by both next-generation sequencing and molecular cytogenetic studies.
null
null
null
null
null
Negative
MESH:C537676
null
null
GBM
7379
null
up 2
null
28,207,902
GBM receiving treatment for methamphetamine use from ACON's Substance Support Service between 2012-15 (n = 101) were interviewed at treatment commencement, and after 4 sessions (n = 60; follow-up 1) and 8 sessions (n = 32; follow-up 2).
null
null
null
null
null
Negative
MESH:D014060
null
null
tongue agenesis
7471
null
Wnt1
null
28,069,795
Wnt1-Cre;Ift88fl/flpups died at birth due to severe craniofacial defects including bilateral cleft lip and palate and tongue agenesis, following the loss of the primary cilia in the CNC-derived palatal mesenchyme.
null
null
null
2
0
Biomarker
C0036341
Schizophrenia
disease
schizophrenia
8991
SELENBP1
SELENBP1
CTD_human
18,163,446
The utility of SELENBP1 gene expression as a biomarker for major psychotic disorders: replication in schizophrenia and extension to bipolar disorder with psychosis.
0.203506
The utility of <span class="gene" id="18163446-0-15-23">SELENBP1</span> gene expression as a biomarker for major psychotic disorders: replication in <span class="disease" id="18163446-0-101-114">schizophrenia</span> and extension to bipolar disorder with psychosis.
CTD_human
1
0
Biomarker
C0028754
Obesity
disease
obesity
23410
SIRT3
SIRT3
CTD_human
23,956,348
Skeletal muscle MnSOD, mitochondrial complex II, and SIRT3 enzyme activities are decreased in maternal obesity during human pregnancy and gestational diabetes mellitus.
0.280549
Skeletal muscle MnSOD, mitochondrial complex II, and <span class="gene" id="23956348-0-53-58">SIRT3</span> enzyme activities are decreased in maternal <span class="disease" id="23956348-0-103-110">obesity</span> during human pregnancy and gestational diabetes mellitus.
CTD_human
null
null
Negative
MESH:C567751
null
null
vesicle flotation
2187
null
Fab
null
28,213,514
We first employed a physical separation approach (vesicle flotation) and subsequently carried out quantitative fluorescence measurements in an intact system (spectroscopic titration), using 4E10 Fab labeled with a polarity-sensitive fluorescent probe.
null
null
null
null
null
Negative
MESH:C562470
null
null
ILD
5657
null
ACPA
null
28,207,496
Specifically, the association among cigarette smoking, high rheumatoid factor titer, elevated anticitrullinated protein antibody (ACPA) levels, and RA-ILD was strengthened.
null
null
null
1
0
Biomarker
C0027720
Nephrosis
disease
nephrosis
10763
NES
nestin
CTD_human
16,418,842
To gain insight into the role of IF proteins in podocytes, we investigated the expression of nestin, vimentin, and desmin in puromycin aminonucleoside (PAN) nephrosis.
0.2
To gain insight into the role of IF proteins in podocytes, we investigated the expression of <span class="gene" id="16418842-2-93-99">nestin</span>, vimentin, and desmin in puromycin aminonucleoside (PAN) <span class="disease" id="16418842-2-157-166">nephrosis</span>.
CTD_human
1
0
Biomarker
C1956346
Coronary Artery Disease
disease
coronary artery disease
406938
MIR146A
miR-146a
CTD_human
20,524,934
Expression of miR-146a/b is associated with the Toll-like receptor 4 signal in coronary artery disease: effect of renin-angiotensin system blockade and statins on miRNA-146a/b and Toll-like receptor 4 levels.
0.201099
Expression of <span class="gene" id="20524934-0-14-22">miR-146a</span>/b is associated with the Toll-like receptor 4 signal in <span class="disease" id="20524934-0-79-102">coronary artery disease</span>: effect of renin-angiotensin system blockade and statins on miRNA-146a/b and Toll-like receptor 4 levels.
CTD_human
null
null
Negative
OMIM:211750
null
null
cobalamin C disease
23624
null
cblC
null
28,151,490
PURPOSE: Despite implementation of newborn screening (NBS), outcomes in cobalamin C disease (cblC) remain poor.
null
null
null
1
0
Biomarker
C0039101
synovial sarcoma
disease
synovial sarcoma
6760
SS18
SYT
CTD_human
9,428,816
SYT-SSX gene fusion as a determinant of morphology and prognosis in synovial sarcoma.
0.452704
<span class="gene" id="9428816-0-0-3">SYT</span>-SSX gene fusion as a determinant of morphology and prognosis in <span class="disease" id="9428816-0-68-84">synovial sarcoma</span>.
CTD_human;ORPHANET
1
0
Biomarker
C0011849
Diabetes Mellitus
group
diabetes mellitus
7058
THBS2
thrombospondin-2
CTD_human
23,723,366
Oxidative stress-mediated thrombospondin-2 upregulation impairs bone marrow-derived angiogenic cell function in diabetes mellitus.
0.2
Oxidative stress-mediated <span class="gene" id="23723366-0-26-42">thrombospondin-2</span> upregulation impairs bone marrow-derived angiogenic cell function in <span class="disease" id="23723366-0-112-129">diabetes mellitus</span>.
CTD_human
1
0
Biomarker
C0002736
Amyotrophic Lateral Sclerosis
disease
ALS
7157
TP53
p53
CTD_human
17,434,459
These results indicate that p53 plays a functional role in oxidative stress-induced cell death and supports the possibility that elevated p53 could be involved in motor neuron death in ALS and the wobbler mouse.
0.201648
These results indicate that <span class="gene" id="17434459-8-28-31">p53</span> plays a functional role in oxidative stress-induced cell death and supports the possibility that elevated <span class="gene" id="17434459-8-138-141">p53</span> could be involved in motor neuron death in <span class="disease" id="17434459-8-185-188">ALS</span> and the wobbler mouse.
CTD_human
2
2
Biomarker
C0015625
Fanconi Anemia
disease
Fanconi anemia
55120
FANCL
PHF9
CTD_human
12,973,351
Our data suggest that PHF9 has a crucial role in the Fanconi anemia pathway as the likely catalytic subunit required for monoubiquitination of FANCD2.
0.40603
Our data suggest that <span class="gene" id="12973351-8-22-26">PHF9</span> has a crucial role in the <span class="disease" id="12973351-8-53-67">Fanconi anemia</span> pathway as the likely catalytic subunit required for monoubiquitination of FANCD2.
CTD_human;ORPHANET
1
0
Biomarker
C0162871
Aortic Aneurysm, Abdominal
disease
abdominal aortic aneurysm
4318
MMP9
MMP-9
CTD_human
17,196,988
Experimental abdominal aortic aneurysm formation is associated with early increases in MnSOD expression and an increase in MMP-9 activity.
0.236572
Experimental <span class="disease" id="17196988-17-13-38">abdominal aortic aneurysm</span> formation is associated with early increases in MnSOD expression and an increase in <span class="gene" id="17196988-17-123-128">MMP-9</span> activity.
CTD_human