NofPmids
float64
1
96
NofSnps
float64
0
1.07k
associationType
stringclasses
3 values
diseaseId
stringlengths
8
12
diseaseName
stringclasses
587 values
diseaseType
stringclasses
3 values
disease_mention
stringlengths
1
89
geneId
stringlengths
1
30
geneSymbol
stringlengths
2
10
gene_mention
stringlengths
2
69
originalSource
stringclasses
1 value
pmid
int64
104k
28.2M
raw_sentence
stringlengths
39
1.09k
score
float64
0.2
1
sentence
stringlengths
143
948
source
stringclasses
9 values
3
1
Biomarker
C1832200
Peroxisome biogenesis disorders
group
peroxisome biogenesis disorders
5189
PEX1
PEX1
CTD_human
9,398,847
Mutations in PEX1 are the most common cause of peroxisome biogenesis disorders.
0.203571
Mutations in <span class="gene" id="9398847-0-13-17">PEX1</span> are the most common cause of <span class="disease" id="9398847-0-47-78">peroxisome biogenesis disorders</span>.
CTD_human
1
0
Biomarker
C0004352
Autistic Disorder
disease
autism
5294
PIK3CG
PIK3CG
CTD_human
14,627,686
Association of INPP1, PIK3CG, and TSC2 gene variants with autistic disorder: implications for phosphatidylinositol signalling in autism.
0.200549
Association of INPP1, <span class="gene" id="14627686-0-22-28">PIK3CG</span>, and TSC2 gene variants with <span class="disease" id="14627686-0-58-75">autistic disorder</span>: implications for phosphatidylinositol signalling in <span class="disease" id="14627686-0-129-135">autism</span>.
CTD_human
1
0
Biomarker
C0022650
Kidney Calculi
disease
nephrolithiasis
5443
POMC
ACTH
CTD_human
1,324,751
Thiazide therapy for ACTH-induced hypercalciuria and nephrolithiasis.
0.2
Thiazide therapy for <span class="gene" id="1324751-0-21-25">ACTH</span>-induced hypercalciuria and <span class="disease" id="1324751-0-53-68">nephrolithiasis</span>.
CTD_human
1
0
Biomarker
C0028754
Obesity
disease
obesity
2876
GPX1
cellular glutathione peroxidase
CTD_human
15,184,668
Development of insulin resistance and obesity in mice overexpressing cellular glutathione peroxidase.
0.200549
Development of insulin resistance and <span class="disease" id="15184668-0-38-45">obesity</span> in mice overexpressing <span class="gene" id="15184668-0-69-100">cellular glutathione peroxidase</span>.
CTD_human
null
null
Negative
MESH:D010051
null
null
ovarian cancer
672;675
null
BRCA1/2
null
28,023,739
We investigated the frequency and clinical characteristics, including the treatment response to platinum therapeutics, of germline BRCA1/2 pathogenic mutation carriers in a large population-based prospective cohort of Australian women with ovarian cancer.
null
null
null
null
null
Negative
MESH:D001943
null
null
breast tumor
13601;66402
null
P85-SLN
null
28,027,535
UNASSIGNED: This work aimed to develop hyaluronic acid (HA) decorated pluronic 85 (P85) coated solid lipid nanoparticles (SLN) loaded with paclitaxel (HA-PTX-P85-SLN) and to evaluate its potential to overcome drug resistance and to increase antitumor efficacy in mice bearing cervical and breast tumor.
null
null
null
1
0
Biomarker
C0025500
Mesothelioma
disease
mesothelioma
1734
DIO2
type 2 iodothyronine deiodinase
CTD_human
11,425,850
The human type 2 iodothyronine deiodinase is a selenoprotein highly expressed in a mesothelioma cell line.
0.2
The human <span class="gene" id="11425850-0-10-41">type 2 iodothyronine deiodinase</span> is a selenoprotein highly expressed in a <span class="disease" id="11425850-0-83-95">mesothelioma</span> cell line.
CTD_human
1
0
Biomarker
C0017636
Glioblastoma
disease
glioblastoma
5071
PARK2
PARK2
CTD_human
19,946,270
Somatic mutations of the Parkinson's disease-associated gene PARK2 in glioblastoma and other human malignancies.
0.200824
Somatic mutations of the Parkinson's disease-associated gene <span class="gene" id="19946270-0-61-66">PARK2</span> in <span class="disease" id="19946270-0-70-82">glioblastoma</span> and other human malignancies.
CTD_human
null
null
Negative
MESH:D001927
null
null
increased structural damage
68527
null
Ucma
null
28,086,000
DMM-triggered cartilage changes, including increased structural damage, proteoglycan loss, and chondrocyte cell death, were aggravated in Ucma-deficient mice compared to WT littermates, thereby demonstrating the potential chondroprotective effects of UCMA.
null
null
null
null
null
Negative
MESH:D009362
null
null
venous invasion
53366
null
sm2
null
28,053,807
In multivariate analysis, older age, male gender, tumor depth (sm2 and sm3 invasion), and venous invasion were independent risk factors for tumor recurrence.
null
null
null
2
0
Biomarker
C0027627
Neoplasm Metastasis
phenotype
metastasis
7124
TNF
TNF?
CTD_human
23,431,386
In this study, we showed that TNF? induces EMT in human HCT116 cells and thereby promotes colorectal cancer (CRC) invasion and metastasis.
0.224371
In this study, we showed that <span class="gene" id="23431386-4-30-34">TNF&alpha;</span> induces EMT in human HCT116 cells and thereby promotes colorectal cancer (CRC) invasion and <span class="disease" id="23431386-4-127-137">metastasis</span>.
CTD_human
null
null
Negative
MESH:D020271
null
null
autosomal dominant neurodegenerative disorder
3064
null
huntingtin
null
28,111,121
Huntington's disease (HD) is an autosomal dominant neurodegenerative disorder characterized by chorea, behavioural and psychiatric manifestations, and dementia, caused by a CAG triplet repeat expansion in the huntingtin gene.
null
null
null
null
null
Negative
MESH:D017092
null
null
CEP
2321
null
VEGFR1
null
28,023,002
soluble VEGFR2, VEGFR1, VEGF, bFGF, Collagen IV (by ELISA) and circulating endothelial and progenitors cells (CEC and CEP, by flow cytometry).
null
null
null
null
null
Negative
MESH:C538265
null
null
attenuate anorexia
328
null
APX
null
28,025,863
Specifically, we investigated whether a lesion of the AP (APX) or subdiaphragmatic vagal deafferentation (SDA) attenuate anorexia, body weight, muscle, and fat loss.
null
null
null
null
null
Negative
MESH:D000699
null
null
analgesia
1576
null
CYP3A4
null
28,121,959
Sufentanil, a synthetic opioid commonly used for the induction and maintenance of general anesthesia, analgesia, and sedation, is mainly metabolized by CYP3A4.
null
null
null
null
null
Negative
MESH:D015785
null
null
retina or the cornea
5362
null
OCT
null
28,187,469
These systems offer high-resolution, intraoperative OCT scans in real-time and provide additional information on microstructures of the retina or the cornea.
null
null
null
1
0
Biomarker
C0023903
Liver neoplasms
group
liver tumor
196
AHR
AHR
CTD_human
19,996,281
To test this hypothesis and determine whether the mouse Ahr gene acts as a tumor suppressor gene in vivo, we have examined the role of Ahr ablation in liver tumorigenesis induced by the genotoxic chemical diethylnitrosamine (DEN), a hepatic carcinogen that is not an AHR ligand.In mice given a single i.p. injection of DEN, AHR antagonized liver tumor formation and growth by regulating cell proliferation, inflammatory cytokine expression, and DNA damage, parameters which were significantly elevated in the livers of control and, more so, of DEN-exposed Ahr-/- mice.
0.206593
To test this hypothesis and determine whether the mouse <span class="gene" id="19996281-4-56-59">Ahr</span> gene acts as a tumor suppressor gene in vivo, we have examined the role of Ahr ablation in liver tumorigenesis induced by the genotoxic chemical diethylnitrosamine (DEN), a hepatic carcinogen that is not an <span class="gene" id="19996281-4-267-270">AHR</span> ligand.In mice given a single i.p. injection of DEN, <span class="gene" id="19996281-4-324-327">AHR</span> antagonized <span class="disease" id="19996281-4-340-351">liver tumor</span> formation and growth by regulating cell proliferation, inflammatory cytokine expression, and DNA damage, parameters which were significantly elevated in the livers of control and, more so, of DEN-exposed Ahr-/- mice.
CTD_human
null
null
Negative
MESH:D009369
null
null
inha/Tag adrenal tumors
19116
null
Prlr-rs1
null
28,131,743
Besides earlier reported Gata4 and Lhcgr, we found up-regulated Esr1, Prlr-rs1, and down-regulated Grb10, Mmp24, Sgcd, Rerg, Gnas, Nfatc2, Gnrhr, Igf2 in inha/Tag adrenal tumors.
null
null
null
2
0
Biomarker
C0030567
Parkinson Disease
disease
PD
100359403
PARK16
PARK16
CTD_human
19,915,576
By comparing results of a GWAS performed on individuals of European ancestry, we identified PARK16, SNCA and LRRK2 as shared risk loci for PD and BST1 and MAPT as loci showing population differences.
0.208451
By comparing results of a GWAS performed on individuals of European ancestry, we identified <span class="gene" id="19915576-4-92-98">PARK16</span>, SNCA and LRRK2 as shared risk loci for <span class="disease" id="19915576-4-139-141">PD</span> and BST1 and MAPT as loci showing population differences.
CTD_human
null
null
Negative
MESH:C536528
null
null
LPS
24498
null
IL-6
null
28,125,988
RESULTS: H-RN inhibited IL-6, monocyte chemotactic protein-1(MCP-1), Interferon- y(IFN-y), and ICAM-1 expression triggered by LPS or poly(I:C), alleviated the clinical manifestation and reduced the clinical score in keratitis in vivo.
null
null
null
null
null
Negative
MESH:D001919
null
null
HDR
7161556
null
VS2000
null
28,047,674
An Ir-192 HDR source (VS2000, VariSource iX) with an effective active length of 5 mm was introduced using a 17-gauge stainless steel needle below the sheet.
null
null
null
1
0
Biomarker
C0007131
Non-Small Cell Lung Carcinoma
disease
NSCLC
332
BIRC5
survivin
CTD_human
16,382,892
Univariate analysis (log-rank test) showed that significant independent prognostic factors in NSCLC included: stage of the disease according to TNM classification (p = 0.006), response to chemotherapy (p = 0.005) and pattern of survivin gene expression (p = 0.00003).
0.20467
Univariate analysis (log-rank test) showed that significant independent prognostic factors in <span class="disease" id="16382892-10-94-99">NSCLC</span> included: stage of the disease according to TNM classification (p = 0.006), response to chemotherapy (p = 0.005) and pattern of <span class="gene" id="16382892-10-228-236">survivin</span> gene expression (p = 0.00003).
CTD_human
3
0
Biomarker
C0011884
Diabetic Retinopathy
disease
diabetic retinopathy
7422
VEGFA
VEGF
CTD_human
11,978,667
A common polymorphism in the 5'-untranslated region of the VEGF gene is associated with diabetic retinopathy in type 2 diabetes.
0.293611
A common polymorphism in the 5'-untranslated region of the <span class="gene" id="11978667-0-59-63">VEGF</span> gene is associated with <span class="disease" id="11978667-0-88-108">diabetic retinopathy</span> in type 2 diabetes.
CTD_human
69
0
Biomarker
C0020538
Hypertensive disease
group
hypertension
183
AGT
Angiotensin II
CTD_human
12,600,921
Angiotensin II-induced hypertension is associated with NAD(P)H oxidase-dependent superoxide production in the vessel wall.
0.52
<span class="gene" id="12600921-1-0-14">Angiotensin II</span>-induced <span class="disease" id="12600921-1-23-35">hypertension</span> is associated with NAD(P)H oxidase-dependent superoxide production in the vessel wall.
CTD_human
1
0
Biomarker
C1458155
Mammary Neoplasms
group
breast tumors
131965
METTL6
METTL6
CTD_human
25,151,356
The genes identified include eight that are essential for cell proliferation (FGD5, METTL6, CPT1A, DTX3, MRPS23, EIF2S2, EIF6 and SLC2A10) and are uniquely amplified in patients with highly proliferative luminal breast tumors, a clinical subset of patients for which few therapeutic options are effective.
0.2
The genes identified include eight that are essential for cell proliferation (FGD5, <span class="gene" id="25151356-4-84-90">METTL6</span>, CPT1A, DTX3, MRPS23, EIF2S2, EIF6 and SLC2A10) and are uniquely amplified in patients with highly proliferative luminal <span class="disease" id="25151356-4-212-225">breast tumors</span>, a clinical subset of patients for which few therapeutic options are effective.
CTD_human
null
null
Negative
MESH:D017827
null
null
type
19016
null
Pparg
null
28,182,703
Total-body deletion of the two Pparg alleles provoked generalized lipoatrophy along with severe type 2 diabetes.
null
null
null
null
null
Negative
MESH:C565957
null
null
ALS
2043
null
EphA4
null
28,196,613
While the exact mechanisms responsible for the therapeutic effect of the new agonists remain to be elucidated, we believe that the described agent represents both an invaluable pharmacological tool to further decipher the role of the EphA4 in ALS and potentially other human diseases, and a significant stepping stone for the development of novel treatments.
null
null
null
null
null
Negative
MESH:D001327
null
null
autoimmune diseases
22035
null
TRAIL
null
28,189,478
Our data showed that different effects of rosarin and rosavin on TRAIL expression can involve distinct action on ERK signaling and hence highlighted their potential to manipulate TRAIL as a tool to rescue the resistance to apoptosis in autoimmune diseases and cancer.
null
null
null
null
null
Negative
MESH:D020518
null
null
HT
5159
null
IMF 1
null
28,110,742
The optimal frequency threshold by using FFT (or HT) for IMF 1 was 21.08 (or 25.00) Hz.
null
null
null
1
0
Biomarker
C0034155
Purpura, Thrombotic Thrombocytopenic
disease
TTP
7056
THBD
TM
CTD_human
7,740,478
Plasma TFPI levels might reflect injury of vascular endothelial cells as do plasma TM levels, and decreased plasma TFPI/TF ratio and vascular endothelial cell injuries might play causative roles in TTP.
0.2
Plasma TFPI levels might reflect injury of vascular endothelial cells as do plasma <span class="gene" id="7740478-9-83-85">TM</span> levels, and decreased plasma TFPI/TF ratio and vascular endothelial cell injuries might play causative roles in <span class="disease" id="7740478-9-198-201">TTP</span>.
CTD_human
3
0
Biomarker
C0019202
Hepatolenticular Degeneration
disease
Wilson disease
1356
CP
ceruloplasmin
CTD_human
22,243,965
Low copper and ceruloplasmin in serum are the diagnostic hallmarks for Menkes disease, Wilson disease, and aceruloplasminemia.
0.211264
Low copper and <span class="gene" id="22243965-1-15-28">ceruloplasmin</span> in serum are the diagnostic hallmarks for Menkes disease, <span class="disease" id="22243965-1-87-101">Wilson disease</span>, and aceruloplasminemia.
CTD_human
null
null
Negative
MESH:D007249
null
null
vascular inflammation
18566
null
PD-1
null
28,115,719
In human artery-SCID chimeras, PD-1 blockade exacerbated vascular inflammation, enriched for PD-1<sup>+</sup> effector T cells, and amplified tissue production of multiple T-cell effector cytokines, including IFN-y, IL-17, and IL-21.
null
null
null
1
0
Biomarker
C0023434
Chronic Lymphocytic Leukemia
disease
B-CLL
7157
TP53
p53
CTD_human
16,439,677
The induction of p53 by nutlin-3 in B-CLL samples was accompanied by alterations of the mitochondrial potential and activation of the caspase-dependent apoptotic pathway.
0.512366
The induction of <span class="gene" id="16439677-5-17-20">p53</span> by nutlin-3 in <span class="disease" id="16439677-5-36-41">B-CLL</span> samples was accompanied by alterations of the mitochondrial potential and activation of the caspase-dependent apoptotic pathway.
CTD_human;ORPHANET
1
0
Biomarker
C0007282
Carotid Stenosis
disease
carotid stenosis
348
APOE
apolipoprotein E
CTD_human
17,243,563
Association of methylenetetrahydrofolate (MTHFR) and apolipoprotein E (apo E) genotypes with homocysteine, vitamin and lipid levels in carotid stenosis.
0.210727
Association of methylenetetrahydrofolate (MTHFR) and <span class="gene" id="17243563-0-53-69">apolipoprotein E</span> (apo E) genotypes with homocysteine, vitamin and lipid levels in <span class="disease" id="17243563-0-135-151">carotid stenosis</span>.
CTD_human
1
0
Biomarker
C0031117
Peripheral Neuropathy
group
peripheral neuropathy
1806
DPYD
DPYD
CTD_human
20,864,405
Late-onset vincristine-induced peripheral neuropathy was associated with the presence of SNPs in genes involved in absorption, distribution, metabolism, and excretion-eg, rs1413239 in DPYD (3·29, 1·47-7·37, 5·40×10(-3)) and rs3887412 in ABCC1 (3·36, 1·47-7·67, p=5·70×10(-3)).
0.200275
Late-onset vincristine-induced <span class="disease" id="20864405-14-31-52">peripheral neuropathy</span> was associated with the presence of SNPs in genes involved in absorption, distribution, metabolism, and excretion-eg, rs1413239 in <span class="gene" id="20864405-14-184-188">DPYD</span> (3·29, 1·47-7·37, 5·40&times;10(-3)) and rs3887412 in ABCC1 (3·36, 1·47-7·67, p=5·70&times;10(-3)).
CTD_human
69
0
Therapeutic
C0020538
Hypertensive disease
group
hypertension
183
AGT
angiotensin II
CTD_human
1,849,535
The antihypertensive effect of calcitonin gene-related peptide in rats with norepinephrine- and angiotensin II-induced hypertension.
0.52
The antihypertensive effect of calcitonin gene-related peptide in rats with norepinephrine- and <span class="gene" id="1849535-0-96-110">angiotensin II</span>-induced <span class="disease" id="1849535-0-119-131">hypertension</span>.
CTD_human
1
0
Biomarker
C0027627
Neoplasm Metastasis
phenotype
metastases
1612
DAPK1
DAPK1
CTD_human
17,319,784
Loss of DAPK1 expression is associated with a selective advantage for tumor cells to resist apoptotic stimuli, allowing them to separate from the original tumor; from this point of view, DAPK1 could be considered a tumor metastases inhibitor gene.
0.201374
Loss of <span class="gene" id="17319784-2-8-13">DAPK1</span> expression is associated with a selective advantage for tumor cells to resist apoptotic stimuli, allowing them to separate from the original tumor; from this point of view, <span class="gene" id="17319784-2-187-192">DAPK1</span> could be considered a tumor <span class="disease" id="17319784-2-221-231">metastases</span> inhibitor gene.
CTD_human
null
null
Negative
MESH:C538336
null
null
NHS
5954
null
RCN
null
28,091,306
UNASSIGNED: The cuts afflicting the NHS across the UK are causing widespread concern among nurses, RCN president Andrea Spyropoulos said in her opening address to this year's congress.
null
null
null
null
null
Negative
MESH:D013224
null
null
asthmatic
3578
null
IL-9
null
28,105,134
mRNA expression levels of IL-9, STAT6, and IRF4 in PBMCs from healthy controls and asthmatic patients were detected by reverse transcription-quantitative polymerase chain reaction.
null
null
null
null
null
Negative
MESH:D015299
null
null
discitis
28891
null
L2-3
null
28,053,757
The patient's clinical course began when he was diagnosed with L2-3 and L3-4 osteomyelitis, discitis and myositis of the bilateral paraspinous muscles.
null
null
null
3
0
Biomarker
C0027726
Nephrotic Syndrome
group
Nephrotic syndrome
7040
TGFB1
TGF-beta 1
CTD_human
8,023,968
Nephrotic syndrome induced by puromycin aminonucleoside (PAN) is characterized by tubulointerstitial (TI) inflammation, foci of TI fibrosis, and increased renal mRNA levels for matrix genes, the tissue inhibitor of metalloproteinases (TIMP), and the transforming growth factor-beta 1 (TGF-beta 1).
0.208148
<span class="disease" id="8023968-1-0-18">Nephrotic syndrome</span> induced by puromycin aminonucleoside (PAN) is characterized by tubulointerstitial (TI) inflammation, foci of TI fibrosis, and increased renal mRNA levels for matrix genes, the tissue inhibitor of metalloproteinases (TIMP), and the <span class="gene" id="8023968-1-250-283">transforming growth factor-beta 1</span> (<span class="gene" id="8023968-1-285-295">TGF-beta 1</span>).
CTD_human
1
0
Biomarker
C0007134
Renal Cell Carcinoma
disease
RCC
10950
BTG3
BTG3
CTD_human
19,221,000
This is the first report to show that BTG3 is epigenetically silenced in RCC and can be reactivated by genistein-induced promoter demethylation and active histone modification.
0.200275
This is the first report to show that <span class="gene" id="19221000-11-38-42">BTG3</span> is epigenetically silenced in <span class="disease" id="19221000-11-73-76">RCC</span> and can be reactivated by genistein-induced promoter demethylation and active histone modification.
CTD_human
1
0
Biomarker
C0162568
Erythropoietic Protoporphyria
disease
EPP
2069
EREG
epiregulin
CTD_human
19,267,999
We observed that the expression of amphiregulin, betacellulin and epiregulin was significantly increased in young EPP mice when compared to aged-matched controls in all genetic backgrounds.
0.2
We observed that the expression of amphiregulin, betacellulin and <span class="gene" id="19267999-6-66-76">epiregulin</span> was significantly increased in young <span class="disease" id="19267999-6-114-117">EPP</span> mice when compared to aged-matched controls in all genetic backgrounds.
CTD_human
null
null
Negative
MESH:D020391
null
null
FacioScapuloHumeral Muscular Dystrophy
2489
null
FSHD
null
28,040,729
FacioScapuloHumeral Muscular Dystrophy (FSHD), one of the most common myopathies, is characterized by a complex interplay of genetic and epigenetic events.
null
null
null
1
0
Biomarker
C0028754
Obesity
disease
obese
6580
SLC22A1
OCT1
CTD_human
20,956,498
OCT1 Expression in adipocytes could contribute to increased metformin action in obese subjects.
0.200549
<span class="gene" id="20956498-0-0-4">OCT1</span> Expression in adipocytes could contribute to increased metformin action in <span class="disease" id="20956498-0-80-85">obese</span> subjects.
CTD_human
1
0
Therapeutic
C0007131
Non-Small Cell Lung Carcinoma
disease
NSCLC
406913
MIR126
hsa-miR-126
CTD_human
20,097,187
The first aim of this study was to confirm a role for three miRNAs (let-7a, hsa-miR-126, and hsa-miR-145) in the inhibition of proliferation in non-small cell lung cancer (NSCLC) cells.
0.203297
The first aim of this study was to confirm a role for three miRNAs (let-7a, <span class="gene" id="20097187-5-76-87">hsa-miR-126</span>, and hsa-miR-145) in the inhibition of proliferation in <span class="disease" id="20097187-5-144-170">non-small cell lung cancer</span> (<span class="disease" id="20097187-5-172-177">NSCLC</span>) cells.
CTD_human
29
117
Therapeutic
C0268542
Ornithine carbamoyltransferase deficiency
disease
OTC deficiency
5009
OTC
OTC
CTD_human
19,669,271
Analysis of the OTC gene showed a Pro-225-Thr (P225T) change in exon 7, a mutation that has been previously implicated in OTC deficiency.
0.699426
Analysis of the <span class="gene" id="19669271-9-16-19">OTC</span> gene showed a Pro-225-Thr (P225T) change in exon 7, a mutation that has been previously implicated in <span class="disease" id="19669271-9-122-136">OTC deficiency</span>.
CTD_human;ORPHANET;UNIPROT
1
0
Biomarker
C0003469
Anxiety Disorders
group
anxiety disorder
5265
SERPINA1
AAT
CTD_human
17,659,342
Proportion of reactive airway disease, obstructive pulmonary disease, and pre-existing anxiety disorder or bipolar disorder were significantly increased in persons carrying AAT non-M polymorphisms compared to normal MM genotype (respectively, 10, 20, 21, and 33% compared to 8, 12, 11, and 9%; contingency table, pulmonary: chi2 37, p=0.0001; affective disorder: chi2=171, p=0.0001).
0.200549
Proportion of reactive airway disease, obstructive pulmonary disease, and pre-existing <span class="disease" id="17659342-8-87-103">anxiety disorder</span> or bipolar disorder were significantly increased in persons carrying <span class="gene" id="17659342-8-173-176">AAT</span> non-M polymorphisms compared to normal MM genotype (respectively, 10, 20, 21, and 33% compared to 8, 12, 11, and 9%; contingency table, pulmonary: chi2 37, p=0.0001; affective disorder: chi2=171, p=0.0001).
CTD_human
null
null
Negative
MESH:D008059
null
null
deficient in mucopolysaccharidosis (MPS) I
411
null
arylsulfatase B
null
28,088,454
BACKGROUND: The goal of this study was to assess the biochemical parameters of the enzymes a-l-iduronidase (IDUA) and arylsulfatase B (ASB), which are deficient in mucopolysaccharidosis (MPS) I and VI, respectively, in dried blood spot (DBS) samples impregnated on filter paper.
null
null
null
null
null
Negative
MESH:C535669
null
null
actinic cheilitis
5925
null
Rb
null
28,022,225
However, squamous cell carcinoma showed higher frequency (93.3%) expression +/++ to Rb protein; actinic cheilitis, 80%; and leukoplakia 73.3% respectively.
null
null
null
null
null
Negative
MESH:D006528
null
null
hepatoma
25236
null
glypican-3
null
28,198,497
A recent study showed that glypican-3 (GPC3), which is abundant in hepatoma cells, has promising specificity and could be used to determine the presence of malignant cells.
null
null
null
null
null
Negative
MESH:D007249
null
null
inflammation
16153
null
IL-10
null
28,062,696
IL-27, a multifunctional cytokine produced by APCs, antagonizes inflammation by affecting conventional dendritic cells (cDC), inducing IL-10, and promoting development of regulatory Tr1 cells.
null
null
null
null
null
Negative
MESH:D016889
null
null
endometrial epithelial cancer
16156
null
IL11
null
28,186,993
Transfection with miR-1 mimic restored miR-1 expression, down-regulated IL11 mRNA and impaired cell viability in grade 3-derived AN3CA human endometrial epithelial cancer cells.
null
null
null
null
null
Negative
MESH:D000782
null
null
aneuploidy
18541
null
Pcnt
null
28,193,732
Pcnt-depleted oocytes from transgenic (Tg) mice were ovulated at the metaphase-II stage, but show significant chromosome misalignment, aneuploidy and premature sister chromatid separation.
null
null
null
null
null
Negative
OMIM:102530
null
null
spermatozoa
6336
null
Nav 1.8
null
28,166,971
UNASSIGNED: The aim of our study was to characterize the voltage gated sodium channel Nav 1.8 in bull spermatozoa.
null
null
null
2
0
Biomarker
C0011860
Diabetes Mellitus, Non-Insulin-Dependent
disease
type 2 diabetes
847
CAT
Catalase
CTD_human
15,111,504
Catalase protects cardiomyocyte function in models of type 1 and type 2 diabetes.
0.212925
<span class="gene" id="15111504-0-0-8">Catalase</span> protects cardiomyocyte function in models of type 1 and <span class="disease" id="15111504-0-65-80">type 2 diabetes</span>.
CTD_human
6
2
Biomarker
C0011860
Diabetes Mellitus, Non-Insulin-Dependent
disease
type 2 diabetes
169026
SLC30A8
SLC30A8
CTD_human
20,424,817
Polymorphisms of ZnT8 (also known as SLC30A8) gene in man are associated with increased risk of type 2 diabetes.
0.301703
Polymorphisms of <span class="gene" id="20424817-3-17-21">ZnT8</span> (also known as <span class="gene" id="20424817-3-37-44">SLC30A8</span>) gene in man are associated with increased risk of <span class="disease" id="20424817-3-96-111">type 2 diabetes</span>.
CTD_human
null
null
Negative
MESH:D009369
null
null
tumor
100034225
null
IL-4
null
28,092,612
The expression levels of interferon-alpha 1 (IFN-a1), interferon-gamma (IFN-y), interleukin-1b, (IL-1b), IL-2, IL-4, IL-13 and tumor necrosis factor alpha (TNF-a) were measured in the serum obtained from control and RAO-susceptible horses during crisis.
null
null
null
null
null
Negative
MESH:D009369
null
null
cervical cancer
12301
null
CACYBP
null
28,163,897
Using in vitro knockdown experiments for two out of 14 differentially co-expressed genes found in cervical cancer (FGFR2 and CACYBP), we showed that they play regulatory roles in cancer cell growth.
null
null
null
1
0
Biomarker
C0020626
Hypoparathyroidism
disease
hypoparathyroidism
846
CASR
CaR
CTD_human
11,701,698
Thus, mutational analysis of the CaR gene should be considered early in the work-up of isolated hypoparathyroidism.
0.213367
Thus, mutational analysis of the <span class="gene" id="11701698-9-33-36">CaR</span> gene should be considered early in the work-up of isolated <span class="disease" id="11701698-9-96-114">hypoparathyroidism</span>.
CTD_human
2
0
Biomarker
C0023467
Leukemia, Myelocytic, Acute
disease
AML
4629
MYH11
MYH11
CTD_human
27,798,625
Outside of signaling alterations, RUNX1-RUNX1T1 and CBFB-MYH11 AMLs demonstrated remarkably different spectra of cooperating mutations, as RUNX1-RUNX1T1 cases harbored recurrent mutations in DHX15 and ZBTB7A, as well as an enrichment of mutations in epigenetic regulators, including ASXL2 and the cohesin complex.
0.225
Outside of signaling alterations, RUNX1-RUNX1T1 and CBFB-<span class="gene" id="27798625-4-57-62">MYH11</span> <span class="disease" id="27798625-4-63-66">AML</span>s demonstrated remarkably different spectra of cooperating mutations, as RUNX1-RUNX1T1 cases harbored recurrent mutations in DHX15 and ZBTB7A, as well as an enrichment of mutations in epigenetic regulators, including ASXL2 and the cohesin complex.
CTD_human
null
null
Negative
MESH:D019318
null
null
PRRSV infection
406902
null
miR-10a
null
28,086,075
The present study sought to determine the function of miR-10a and its molecular mechanism during PRRSV infection.
null
null
null
3
0
Biomarker
C0012739
Disseminated Intravascular Coagulation
disease
Disseminated intravascular coagulation
462
SERPINC1
antithrombin III
CTD_human
6,233,579
[Disseminated intravascular coagulation induced by heparin. Treatment with a combination of low-molecular weight heparin and concentrated antithrombin III].
0.200824
[<span class="disease" id="6233579-0-1-39">Disseminated intravascular coagulation</span> induced by heparin. Treatment with a combination of low-molecular weight heparin and concentrated <span class="gene" id="6233579-0-138-154">antithrombin III</span>].
CTD_human
null
null
Negative
MESH:D064420
null
null
cytotoxicity
28935
null
A20
null
28,110,818
We examined, cytotoxicity, allergenicity and impact of A20 on the proliferation and viability of human keratinocytes.
null
null
null
9
2
Biomarker
C0016667
Fragile X Syndrome
disease
FXS
2332
FMR1
FMR1
CTD_human
22,043,169
Herein, we discuss the molecular mechanisms leading to FXS and the Prader-Willi phenotype with an emphasis on mouse FMR1 knockout studies that have shown the reversal of weight increase through mGluR antagonists.
0.948716
Herein, we discuss the molecular mechanisms leading to <span class="disease" id="22043169-8-55-58">FXS</span> and the Prader-Willi phenotype with an emphasis on mouse <span class="gene" id="22043169-8-116-120">FMR1</span> knockout studies that have shown the reversal of weight increase through mGluR antagonists.
CTD_human;ORPHANET;UNIPROT
4
0
Biomarker
C1961099
Precursor T-Cell Lymphoblastic Leukemia-Lymphoma
disease
T-ALL
4851
NOTCH1
Notch1
CTD_human
24,394,663
We and others have shown that Notch1 directly regulates c-Myc, a known regulator of quiescence in stem and progenitor populations, leading us to examine whether c-Myc inhibition results in efficient targeting of T-ALL-initiating cells.
0.254314
We and others have shown that <span class="gene" id="24394663-3-30-36">Notch1</span> directly regulates c-Myc, a known regulator of quiescence in stem and progenitor populations, leading us to examine whether c-Myc inhibition results in efficient targeting of <span class="disease" id="24394663-3-212-217">T-ALL</span>-initiating cells.
CTD_human
null
null
Negative
MESH:C566610
null
null
axis
6615
null
Snail
null
28,176,759
Thus, the Snail-PFKP axis plays an important role in cancer cell survival via regulation of glucose flux between glycolysis and PPP.
null
null
null
9
0
Biomarker
C0007134
Renal Cell Carcinoma
disease
RCC
7428
VHL
VHL
CTD_human
9,137,812
By comparison to much lower reported VHL mutation frequencies of 33-55% in TRI-unexposed RCC patients, these results indicate a specifically high mutation frequency at the VHL gene in TRI-exposed RCC patients; four of these aberrations have thus far been confirmed as VHL mutations by sequence analysis.
0.525276
By comparison to much lower reported VHL mutation frequencies of 33-55% in TRI-unexposed <span class="disease" id="9137812-6-89-92">RCC</span> patients, these results indicate a specifically high mutation frequency at the <span class="gene" id="9137812-6-172-175">VHL</span> gene in TRI-exposed <span class="disease" id="9137812-6-196-199">RCC</span> patients; four of these aberrations have thus far been confirmed as VHL mutations by sequence analysis.
CTD_human;HPO
null
null
Negative
MESH:D006973
null
null
hypertension
14405
null
GABAA
null
28,009,705
OBJECTIVE: Blood pressure high Schlager (BPH/2J) mice have neurogenic hypertension associated with differences in hypothalamic GABAA receptors compared with their normotensive counterparts (BPN/3J).
null
null
null
null
null
Negative
MESH:D010939
null
null
PHD
9678
null
PHF14
null
28,160,558
In this study, we found that PHF14, a newly identified PHD finger protein, is highly expressed in lung cancer.
null
null
null
null
null
Negative
MESH:C562729
null
null
esophageal squamous cell carcinoma
246100
null
NY-ESO-1
null
28,108,950
The success of these trials provided the foundation for clinical trials, including recent clinical successes using TCR-engineered T cells to target New York esophageal squamous cell carcinoma (NY-ESO-1).
null
null
null
null
null
Negative
MESH:D016510
null
null
angiogenesis
24835
null
Tumor necrosis factor alpha
null
28,209,985
Tumor necrosis factor alpha (TNFa)-induced angiogenesis plays important roles in the progression of various diseases, including cancer, wet age-related macular degeneration, and rheumatoid arthritis.
null
null
null
3
0
Biomarker
C0038587
Substance Withdrawal Syndrome
disease
withdrawal syndrome
135
ADORA2A
adenosine A2A receptor
CTD_human
16,470,403
Absence of quasi-morphine withdrawal syndrome in adenosine A2A receptor knockout mice.
0.2
Absence of quasi-morphine <span class="disease" id="16470403-0-26-45">withdrawal syndrome</span> in <span class="gene" id="16470403-0-49-71">adenosine A2A receptor</span> knockout mice.
CTD_human
5
0
Biomarker
C0024121
Lung Neoplasms
group
lung tumors
3265
HRAS
Ha-ras
CTD_human
12,765,245
Previous studies showed that significant differences in mutation frequency of the human c-Ha-ras transgene between vinyl carbamate (VC)- and ethyl carbamate (urethane)-induced lung tumors were observed in rasH2 mice.
0.201099
Previous studies showed that significant differences in mutation frequency of the human c-<span class="gene" id="12765245-1-90-96">Ha-ras</span> transgene between vinyl carbamate (VC)- and ethyl carbamate (urethane)-induced <span class="disease" id="12765245-1-176-187">lung tumors</span> were observed in rasH2 mice.
CTD_human
16
16
Biomarker
C0007131
Non-Small Cell Lung Carcinoma
disease
NSCLC
1956
EGFR
EGFR
CTD_human
22,751,098
Human non-small cell lung cancers (NSCLCs) with activating mutations in EGFR frequently respond to treatment with EGFR-targeted tyrosine kinase inhibitors (TKIs), such as erlotinib, but responses are not durable, as tumors acquire resistance.
0.345967
Human non-small cell lung cancers (<span class="disease" id="22751098-1-35-40">NSCLC</span>s) with activating mutations in <span class="gene" id="22751098-1-72-76">EGFR</span> frequently respond to treatment with <span class="gene" id="22751098-1-114-118">EGFR</span>-targeted tyrosine kinase inhibitors (TKIs), such as erlotinib, but responses are not durable, as tumors acquire resistance.
CTD_human
69
0
Biomarker
C0020538
Hypertensive disease
group
hypertension
183
AGT
angiotensin II
CTD_human
9,024,144
Role of superoxide in angiotensin II-induced but not catecholamine-induced hypertension.
0.52
Role of superoxide in <span class="gene" id="9024144-0-22-36">angiotensin II</span>-induced but not catecholamine-induced <span class="disease" id="9024144-0-75-87">hypertension</span>.
CTD_human
null
null
Negative
MESH:D006623
null
null
von Hippel Lindau
6390
null
succinate dehydrogenase
null
28,036,268
Neuroendocrine neoplasms such as paragangliomas (PGLs) are particularly appealing for understanding the cancer metabolic adjustments because of their associations with deregulations of metabolic enzymes, such as succinate dehydrogenase (SDH), and the von Hippel Lindau (VHL) gene involved in HIF-1a stabilization.
null
null
null
4
2
Biomarker
C0002395
Alzheimer's Disease
disease
Alzheimer's disease
348
APOE
apolipoprotein E
CTD_human
8,346,443
Gene dose of apolipoprotein E type 4 allele and the risk of Alzheimer's disease in late onset families.
0.64
Gene dose of <span class="gene" id="8346443-0-13-29">apolipoprotein E</span> type 4 allele and the risk of <span class="disease" id="8346443-0-60-79">Alzheimer's disease</span> in late onset families.
CTD_human;HPO
null
null
Negative
MESH:D011471
null
null
prostate cancer
30951
null
PC-3
null
28,136,837
METHODS: Expression of mRNA for the five subtypes of the somatostatin receptor in PC-3 and DU-145 human prostate cancer cell lines was evaluated by RT-PCR.
null
null
null
null
null
Negative
MESH:C536038
null
null
MCAD
19017
null
PGC1-alpha
null
28,116,391
Lastly, the HF-MCT100% group had raised markers of beta-oxidation (UCP3 and MCAD) and mitochondrial biogenesis (PGC1-alpha and NRF1).
null
null
null
2
0
Biomarker
C0036341
Schizophrenia
disease
schizophrenia
10814
CPLX2
complexin II
CTD_human
11,483,314
In schizophrenia, synaptophysin mRNA was decreased, as was complexin II and its mRNA.
0.287612
In <span class="disease" id="11483314-5-3-16">schizophrenia</span>, synaptophysin mRNA was decreased, as was <span class="gene" id="11483314-5-59-71">complexin II</span> and its mRNA.
CTD_human
null
null
Negative
MESH:D019636
null
null
neurodegenerative illnesses
19122
null
prion protein
null
28,077,650
Prion diseases are progressive fatal neurodegenerative illnesses caused by the accumulation of transmissible abnormal prion protein (PrP).
null
null
null
2
0
Biomarker
C0002395
Alzheimer's Disease
disease
Alzheimer's disease
4846
NOS3
NOS3
CTD_human
10,514,107
Association between Alzheimer's disease and the NOS3 gene.
0.236288
Association between <span class="disease" id="10514107-0-20-39">Alzheimer's disease</span> and the <span class="gene" id="10514107-0-48-52">NOS3</span> gene.
CTD_human
1
0
Biomarker
C0024117
Chronic Obstructive Airway Disease
disease
COPD
7157
TP53
p53
CTD_human
17,274,270
These results illustrate the use of p53 immunoreactivity in the characterization of COPD, including mustard lung.
0.210452
These results illustrate the use of <span class="gene" id="17274270-8-36-39">p53</span> immunoreactivity in the characterization of <span class="disease" id="17274270-8-84-88">COPD</span>, including mustard lung.
CTD_human
1
0
Biomarker
C0030312
Pancytopenia
disease
pancytopenia
6157
RPL27A
Rpl27a
CTD_human
21,674,502
We present a mutation in the ribosomal protein Rpl27a gene (sooty foot ataxia mice), isolated through a sensitized N-ethyl-N-nitrosourea (ENU) mutagenesis screen for p53 pathway defects, that shares striking phenotypic similarities with high p53 mouse models, including cerebellar ataxia, pancytopenia and epidermal hyperpigmentation.
0.2
We present a mutation in the ribosomal protein <span class="gene" id="21674502-2-47-53">Rpl27a</span> gene (sooty foot ataxia mice), isolated through a sensitized N-ethyl-N-nitrosourea (ENU) mutagenesis screen for p53 pathway defects, that shares striking phenotypic similarities with high p53 mouse models, including cerebellar ataxia, <span class="disease" id="21674502-2-289-301">pancytopenia</span> and epidermal hyperpigmentation.
CTD_human
null
null
Negative
MESH:D058499
null
null
IRD
132320
null
SCLT1
null
28,005,958
Notably, WES unveiled four new candidates for non-syndromic IRD: SEMA6B, CEP78, CEP250, SCLT1, the two latter previously associated to syndromic disorders.
null
null
null
1
0
Therapeutic
C0878544
Cardiomyopathies
group
cardiomyopathy
7066
THPO
TPO
CTD_human
16,651,473
We propose to further explore an integrated program, incorporating TPO with other protocols, for treatment of DOX-induced cardiotoxicity and other forms of cardiomyopathy.
0.2
We propose to further explore an integrated program, incorporating <span class="gene" id="16651473-10-67-70">TPO</span> with other protocols, for treatment of DOX-induced cardiotoxicity and other forms of <span class="disease" id="16651473-10-156-170">cardiomyopathy</span>.
CTD_human
null
null
Negative
MESH:D011475
null
null
overall survival
6513
null
GLUT-1
null
28,014,305
GLUT-1 intensity and extent were scored in duplicate and impact on response rate (RR), progression free survival (PFS) and overall survival (OS) studied.
null
null
null
null
null
Negative
MESH:C562590
null
null
XPB
2068
null
TFIIH
null
28,157,507
Current models suggest that class II gene transcription requires ATP and the TFIIH XPB subunit to open a promoter.
null
null
null
3
0
Biomarker
C0023473
Myeloid Leukemia, Chronic
disease
CML
613
BCR
BCR
CTD_human
18,673,174
However, 95% of CML patients have the ABL gene from chromosome 9 fused with the breakpoint cluster (BCR) gene from chromosome 22, resulting in a short chromosome known as the Philadelphia chromosome.
0.75587
However, 95% of <span class="disease" id="18673174-3-16-19">CML</span> patients have the ABL gene from chromosome 9 fused with the breakpoint cluster (<span class="gene" id="18673174-3-100-103">BCR</span>) gene from chromosome 22, resulting in a short chromosome known as the Philadelphia chromosome.
CTD_human;HPO;ORPHANET
4
1
Biomarker
C0026769
Multiple Sclerosis
disease
multiple sclerosis
3575
IL7R
IL7R
CTD_human
17,660,817
Interleukin 7 receptor alpha chain (IL7R) shows allelic and functional association with multiple sclerosis.
0.27028
<span class="gene" id="17660817-0-0-34">Interleukin 7 receptor alpha chain</span> (<span class="gene" id="17660817-0-36-40">IL7R</span>) shows allelic and functional association with <span class="disease" id="17660817-0-88-106">multiple sclerosis</span>.
CTD_human
3
2
Biomarker
C0003873
Rheumatoid Arthritis
disease
rheumatoid arthritis
6366
CCL21
CCL21
CTD_human
20,453,842
We also refined associations at two established rheumatoid arthritis risk loci (IL2RA and CCL21) and confirmed the association at AFF3.
0.229052
We also refined associations at two established <span class="disease" id="20453842-4-48-68">rheumatoid arthritis</span> risk loci (IL2RA and <span class="gene" id="20453842-4-90-95">CCL21</span>) and confirmed the association at AFF3.
CTD_human
2
0
Biomarker
C0338488
Alternating hemiplegia of childhood
disease
Alternating Hemiplegia of Childhood
478
ATP1A3
ATP1A3
CTD_human
24,631,656
De novo mutations in ATP1A3, the gene encoding the ?3-subunit of Na(+),K(+)-ATPase, are associated with the neurodevelopmental disorder Alternating Hemiplegia of Childhood (AHC).
0.407418
De novo mutations in <span class="gene" id="24631656-1-21-27">ATP1A3</span>, the gene encoding the &alpha;3-subunit of Na(+),K(+)-ATPase, are associated with the neurodevelopmental disorder <span class="disease" id="24631656-1-136-171">Alternating Hemiplegia of Childhood</span> (AHC).
CTD_human;ORPHANET
4
3
Biomarker
C0038013
Ankylosing spondylitis
disease
ankylosing spondylitis
51752
ERAP1
ARTS1
CTD_human
17,952,073
Comparing these data against a common control dataset derived from 1,500 randomly selected healthy British individuals, we report initial association and independent replication in a North American sample of two new loci related to ankylosing spondylitis, ARTS1 and IL23R, and confirmation of the previously reported association of AITD with TSHR and FCRL3.
0.234483
Comparing these data against a common control dataset derived from 1,500 randomly selected healthy British individuals, we report initial association and independent replication in a North American sample of two new loci related to <span class="disease" id="17952073-2-232-254">ankylosing spondylitis</span>, <span class="gene" id="17952073-2-256-261">ARTS1</span> and IL23R, and confirmation of the previously reported association of AITD with TSHR and FCRL3.
CTD_human
null
null
Negative
MESH:C563178
null
null
aortic valve implantation
7450
null
von Willebrand factor
null
28,088,607
BACKGROUND: In this study, we sought to analyze the incidence and relevance of von Willebrand factor (VWF) abnormalities in patients undergoing transcatheter aortic valve implantation (TAVI), especially on perioperative bleeding.
null
null
null
1
0
Biomarker
C0033578
Prostatic Neoplasms
group
prostate tumor
2925
GRPR
gastrin-releasing peptide receptor
CTD_human
17,204,703
Androgen-dependent expression of the gastrin-releasing peptide receptor in human prostate tumor xenografts.
0.203557
Androgen-dependent expression of the <span class="gene" id="17204703-0-37-71">gastrin-releasing peptide receptor</span> in human <span class="disease" id="17204703-0-81-95">prostate tumor</span> xenografts.
CTD_human
1
0
Therapeutic
C0027051
Myocardial Infarction
disease
myocardial infarction
8525
DGKZ
diacylglycerol kinase zeta
CTD_human
17,071,729
Cardiac-specific overexpression of diacylglycerol kinase zeta attenuates left ventricular remodeling and improves survival after myocardial infarction.
0.2
Cardiac-specific overexpression of <span class="gene" id="17071729-0-35-61">diacylglycerol kinase zeta</span> attenuates left ventricular remodeling and improves survival after <span class="disease" id="17071729-0-129-150">myocardial infarction</span>.
CTD_human
2
0
Biomarker
C0004096
Asthma
disease
asthma
3383
ICAM1
intercellular adhesion molecule-1
CTD_human
17,014,439
Role of intercellular adhesion molecule-1 in a murine model of toluene diisocyanate-induced asthma.
0.218218
Role of <span class="gene" id="17014439-0-8-41">intercellular adhesion molecule-1</span> in a murine model of toluene diisocyanate-induced <span class="disease" id="17014439-0-92-98">asthma</span>.
CTD_human
null
null
Negative
MESH:C537751
null
null
oncogene induced senescence
57670
null
KIAA1549
null
28,002,790
It is most frequently caused by KIAA1549:BRAF fusions, and leads to oncogene induced senescence (OIS).
null
null
null
1
0
Biomarker
C0031117
Peripheral Neuropathy
group
PN
100126572
GJE1
GJE1
CTD_human
21,228,734
Genes associated with immune function (CTLA4, CTSS), reflexive coupling within Schwann cells (GJE1), drug binding (PSMB1), and neuron function (TCF4, DYNC1I1) associated with bortezomib-induced PN in this study.
0.200275
Genes associated with immune function (CTLA4, CTSS), reflexive coupling within Schwann cells (<span class="gene" id="21228734-10-94-98">GJE1</span>), drug binding (PSMB1), and neuron function (TCF4, DYNC1I1) associated with bortezomib-induced <span class="disease" id="21228734-10-194-196">PN</span> in this study.
CTD_human