Hugging Face's logo

Datasets:
ChuangyiHan
/
NatureMachineIntelligence-DatasetsForTransferabilityofSSLModels

Tasks:
Zero-Shot Classification
Size:
10B<n<100B
Tags:
biology
medical
code
License:
Dataset card Files
xet
Community
ChuangyiHan commited on
Commit
b435432
·
verified ·
1 Parent(s): a818749

Upload 15 files

Browse files

Core datasets for SSL benchmarking

Files changed (15) hide show
  1. .gitattributes +13 -0
  2. Chromium_FFPE_Human_Breast_Cancer_Chromium_FFPE_Human_Breast_Cancer_count_sample_filtered_feature_bc_matrix.h5 +3 -0
  3. GEX_human_neocortex_SSL.h5ad +3 -0
  4. HiT_CA4_DGC_filtered.h5ad +3 -0
  5. Human_Great_Apes_filtered.h5ad +3 -0
  6. annotated_Chromium_FFPE_Human_Breast_Cancer_Chromium_FFPE_Human_Breast_Cancer_count_sample_filtered_feature_bc_matrix.h5ad +3 -0
  7. marshall_slide_seq_human_kidney1.h5ad +3 -0
  8. marshall_slide_seq_human_kidney3.h5ad +3 -0
  9. marshall_slide_seq_human_kidney4.h5ad +3 -0
  10. marshall_slide_seq_human_kidney5.h5ad +3 -0
  11. marshall_slide_seq_human_kidney6.h5ad +3 -0
  12. marshall_slide_seq_human_kidney7.h5ad +3 -0
  13. marshall_slide_seq_human_kidney8.h5ad +3 -0
  14. marshall_slide_seq_mouse_kidney_combined.h5ad +3 -0
  15. merfish_human_neocortex_SSL.h5ad +3 -0
.gitattributes CHANGED
@@ -58,3 +58,16 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
58
  *.mp4 filter=lfs diff=lfs merge=lfs -text
59
  *.webm filter=lfs diff=lfs merge=lfs -text
60
  marshall_slide_seq_human_kidney2.h5ad filter=lfs diff=lfs merge=lfs -text
 
 
 
 
 
 
 
 
 
 
 
 
 
 
58
  *.mp4 filter=lfs diff=lfs merge=lfs -text
59
  *.webm filter=lfs diff=lfs merge=lfs -text
60
  marshall_slide_seq_human_kidney2.h5ad filter=lfs diff=lfs merge=lfs -text
61
+ annotated_Chromium_FFPE_Human_Breast_Cancer_Chromium_FFPE_Human_Breast_Cancer_count_sample_filtered_feature_bc_matrix.h5ad filter=lfs diff=lfs merge=lfs -text
62
+ GEX_human_neocortex_SSL.h5ad filter=lfs diff=lfs merge=lfs -text
63
+ HiT_CA4_DGC_filtered.h5ad filter=lfs diff=lfs merge=lfs -text
64
+ Human_Great_Apes_filtered.h5ad filter=lfs diff=lfs merge=lfs -text
65
+ marshall_slide_seq_human_kidney1.h5ad filter=lfs diff=lfs merge=lfs -text
66
+ marshall_slide_seq_human_kidney3.h5ad filter=lfs diff=lfs merge=lfs -text
67
+ marshall_slide_seq_human_kidney4.h5ad filter=lfs diff=lfs merge=lfs -text
68
+ marshall_slide_seq_human_kidney5.h5ad filter=lfs diff=lfs merge=lfs -text
69
+ marshall_slide_seq_human_kidney6.h5ad filter=lfs diff=lfs merge=lfs -text
70
+ marshall_slide_seq_human_kidney7.h5ad filter=lfs diff=lfs merge=lfs -text
71
+ marshall_slide_seq_human_kidney8.h5ad filter=lfs diff=lfs merge=lfs -text
72
+ marshall_slide_seq_mouse_kidney_combined.h5ad filter=lfs diff=lfs merge=lfs -text
73
+ merfish_human_neocortex_SSL.h5ad filter=lfs diff=lfs merge=lfs -text
Chromium_FFPE_Human_Breast_Cancer_Chromium_FFPE_Human_Breast_Cancer_count_sample_filtered_feature_bc_matrix.h5 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ecd3f6e37803b16ea0b69420adfaa677fb6cc70c89d3be529cf5f8094db88624
3
+ size 91614102
GEX_human_neocortex_SSL.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ff6ad4d08f2d170e9f45ef4f545367157a8bfe725b23b1876483e9c842fc7fe3
3
+ size 5545934980
HiT_CA4_DGC_filtered.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:900d436b2b6f155303647813482f7fe5f2529abf9c48091abf7dbef96f0727d9
3
+ size 1586428108
Human_Great_Apes_filtered.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:82e4e69d16b911cb11baa6059bd3705f9134766f2873ab5a6b8c377849e20677
3
+ size 6058399559
annotated_Chromium_FFPE_Human_Breast_Cancer_Chromium_FFPE_Human_Breast_Cancer_count_sample_filtered_feature_bc_matrix.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ca5059a2559af6eca1a2d7635a6df1a809fbf41ee57bf4d930f209e0066e887d
3
+ size 913270880
marshall_slide_seq_human_kidney1.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:060d30912ea038c8218e388913e80e915d65058eaff3ab112c918c82dd587d0a
3
+ size 29319499
marshall_slide_seq_human_kidney3.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:35114975a443eb92d7421be5d3d9ab1e875b7dba267da6cb429fb71d47a37c1d
3
+ size 27183779
marshall_slide_seq_human_kidney4.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:a9a7a08f4ce6a63a699097bca44f6fd8ebe47049a442124551e1c71ead564f4e
3
+ size 27515289
marshall_slide_seq_human_kidney5.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:cf264c833a857c747863abf685201c1456e4d03c968abdc78e476e29364a8b6a
3
+ size 24241649
marshall_slide_seq_human_kidney6.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:6c72ed09285e5d95b15c35c1ab192523dcce1727379282de667fa3e7e2038d41
3
+ size 28851232
marshall_slide_seq_human_kidney7.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:c9e0fe27f05f1a229f187772a9827bbc420796dbd5a2da3af423d7617c48f6cf
3
+ size 17942013
marshall_slide_seq_human_kidney8.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:0e65e43b48f84b3f5749a4dcad3c9be0ef706e0dca2129e08c8a3b9c0592d809
3
+ size 18242220
marshall_slide_seq_mouse_kidney_combined.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ea6bba8e05b4cab171fb2884cabe61b6c179929639d7af8e7dcfc3c74e9b7637
3
+ size 545094162
merfish_human_neocortex_SSL.h5ad ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:69f80a52304bf07c947b6ae5f7f8d784aade699dbc8ae154685efc294cdaa173
3
+ size 13062762679