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Diterpenoids from Gutierrezia sarothrae and G. microcephala: Chemical diversity, chemophenetics and implications to toxicity in grazing livestock
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Broom snakeweed (Gutierrezia sarothrae) and threadleaf snakeweed (G. microcephala) are suffrutescent plants found in many parts of western US rangelands and are possibly toxic to grazing livestock. The toxic components are not known, but it has been suggested that the diterpene acids may be both toxic and abortifacient. One hundred sixty-two samples of snakeweed were collected from 55 locations in Colorado, Oklahoma, New Mexico, Texas, Wyoming and Utah and were taxonomically classified. Samples were analyzed by GC-MS in a chemophenetic analysis and grouped into individual chemotypes based on diterpene acid content. The GC-MS profiles were found to be diverse showing at least eight different chemotypes. From each of the chemotypes the major diterpene acids were isolated and characterized by IR, MS and NMR spectroscopy. Twenty-one diterpenoids were identified and found to be a mix of furano, lactone, di-acid and esters of labdane, ent-labdane and chlerodane acids and alcohols. Only four of the 21 compounds isolated had been previously reported as occurring in G. sarathorea or G. microcephala, while another eight compounds were previously reported from other Gutierrezia or related species. Nine of the isolated diterpenoids have not been previously reported and their structure elucidation is reported.
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Behavioural thermoregulation linked to foraging in blue sharks
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Large pelagic fishes often dive and surface repeatedly as if they were airbreathers, raising a question about the functions of these movements. Some species (e.g., bigeye tuna, ocean sunfish) apparently alternate foraging in deep cold waters and rewarming in shallow warm waters. However, it is unclear how prevalent this pattern is among species. Blue sharks are the widest-ranging pelagic shark with expanded vertical niches, providing a model for studying foraging–thermoregulation associations. We used electronic tags, including video cameras, to record the diving behaviour, muscle temperature, and foraging events of two blue sharks. During repeated deep dives (max. 422 m), muscle temperature changed more slowly than ambient water temperature. Sharks shifted between descents and ascents before muscle temperature reached ambient temperature, leading to a narrower range (8 °C) of muscle temperature than ambient temperature (20 °C). 2.5-h video footage showed a shark catching a squid, during which a burst swimming event was recorded. Similar swimming events, detected from the entire tag data (20 − 22 h), occurred over a wide depth range (5 − 293 m). We conclude that, instead of alternating foraging and rewarming, blue sharks at our study site forage and thermoregulate continuously in the water column. Furthermore, our comparative analyses showed that the heat exchange rates of blue sharks during the warming and cooling process were not exceptional among fishes for their body size. Thus, behavioural thermoregulation linked to foraging, rather than enhanced abilities to control heat exchange rates, is likely key to the expanded thermal niches of this ectothermic species. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00227-021-03971-3.
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Cytochrome P450-based metabolic insecticide resistance in Anopheles and Aedes mosquito vectors: Muddying the waters.
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Despite the substantial progress achieved in the characterization of cytochrome P450 (CYP) -based resistance mechanisms in mosquitoes, a number of questions remain unanswered. These include: (i) the regulation and physiology of resistance conferring CYPs; (ii) the actual contribution of CYPs in resistance alone or in combination with other detoxification partners or other resistance mechanisms; (iii) the association between overexpression levels and allelic variation, with the catalytic activity and the intensity of resistance and (iv) the true value of molecular diagnostics targeting CYP markers, for driving decision making in the frame of Insecticide Resistance Management applications. Furthermore, the translation of CYP - based insecticide resistance research in mosquitoes into practical applications, is being developed, but it is not fully exploited, as yet. Examples include the production of high throughput platforms for screening the liability (stability) or inhibition potential of novel insecticidal leads and synergists (add-ons), as well as the exploration of the negative cross resistance concept (i.e. detoxification of certain insecticides, but activation of others pro-insecticides). The goal of this review is to critically summarise the current knowledge and the gaps of the CYP-based metabolic insecticide resistance in Anopheles and Aedes mosquito vectors. The progress and limitations of the protein and the reverse/forward genetic approaches, the understanding and importance of molecular and physiological aspects, as well as the current and future exploitation routes of CYP research are discussed.
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The future of farming for Southland
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This project was conducted to develop a dataset containing animThe future of Agriculture in Southland is facing another period of uncertainty, with the impact of covid19 and its possible long-term effects not fully. However, some indications are available regarding changing food patterns, disruptive shipping routes and the logistics of ‘just in time’ delivery that are being tested, border requirements changing and continuing disruptive technology changing the way consumers purchase all forms of consumable goods including food. This same uncertainty applies to the rest of New Zealand agriculture. The arable, Dairy, beef, sheep, and deer sectors are all trying to work through and prepare for what this uncertain future may look like, and how it will shape the future viability of farming enterprises. © 2022, New Zealand Grassland Association. All rights reserved.
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Bibliometric analysis of global research on white rot fungi biotechnology for environmental application
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In recent years, white rot fungi (WRFs) have received tremendous attention as a biotechnological tool for environmental pollution control. In order to systematically and comprehensively describe the progress, trends, and hotspots of WRF biotechnology in the field of environmental pollution control, the 3967 related publications from 2003 to 2020 were collected from Web of Science Core Collection database, and the bibliometric characteristics including publication output, country, institution, journal, author, citation frequency, h-index, and research focus were evaluated by using Excel 2007, CiteSpace V, and VOSviewer. The results indicated that the number of research publications increased rapidly before 2009, but after that, the number of publications fluctuated in a certain range. China and USA were the most productive countries and the most active country in international cooperation. In this field, most authors tend to cooperate within a small group. The journal and subject category with the largest number of publications are “International Biodeterioration & Biodegradation” and “Biotechnology Applied Microbiology”, respectively. The analysis of high-frequency keywords revealed that “laccase”, “biodegradation”, “decolorization”, and “Phanerochaete chrysosporium” were the most cited terms among all publications. The pretreatment of biomass waste, decolorization of dye wastewater, and bioremediation of polluted environment are the key research directions of WRF biotechnology. Finally, the frontier topics and active authors in this research field were identified using burst detection. We believe that this bibliometric study provides a comprehensive and systematic overview and promoted the future cooperative research and knowledge exchange in this field of WRF biotechnology for environmental applications. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s11356-021-15787-1.
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Pasture management thecniques, use of fertilizers, limestore and irrigation done by a group of farmers/ Técnicas de manejo de pastagens, utilização de fertilizantes, corretivos e irrigação por um grupo de pecuarista
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The objective of this study was to assess quantitatively and qualitatively the degree of use fertilizers, limestone and irrigation, as well as the management practices of pasture. A survey was carried out with 232 farmers and technicians of rural extension about the adoption of technical conservation and soil fertility, leaf and soil analysis, irrigation, fertilizers use and limestone, as well as costs of these techniques on production. The results pointed to an usual use of soil analysis, lime, micronutrients and soil conservation practices by 96%, 97%, 78% and 99% of interviewees. Regardless of the soil analysis, most of them used N, P2O5 and K2O formula (NPK) in pasture fertilizatiat are: 400kg ha-1 of 8-28-16 at planting, and 700 kg ha-1 of 20-5-20 at topdressing rates. However, 93.8% of the producers did not realize leaf analysis. For the interviewed an adequate price relationship for fertilizer use is 1t per 1000 milk liters and 1t per 195 meat kg (13@).
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Metagenomic insights into the effect of thermal hydrolysis pre-treatment on microbial community of an anaerobic digestion system
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Thermal hydrolysis process (THP) is an effective pre-treatment method to reduce solids volume and improve biogas production during anaerobic digestion (AD) via increasing the biodegradability of waste activated sludge (WAS). However, the effects of THP pre-treated sludge on microbial diversity, interspecies interactions, and metabolism in AD systems remain largely unknown. We therefore setup and operated an anaerobic digester during a long-term period to shed light on the effect of THP pre-treatment on AD microbial ecology in comparison to conventional AD via Illumina based 16S rRNA gene amplicon sequencing and genome-centric metagenomics analysis. Results showed THP sludge significantly reduced the microbial diversity, shaped the microbial community structure, and resulted in more intense microbial interactions. Compared to WAS as the feed sludge, THP sludge shaped the core functional groups, but functional redundancy ensured the system's stability. The metabolic interactions between methanogens and syntrophic bacteria as well as the specific metabolic pathways were further elucidated. Hydrogenotrophic methanogens, Methanospirillum sp. and Methanolinea sp., were the primary contributors for methane production when treating THP and WAS, respectively, which also have potential for acetate oxidation to methane. Collectively, this study provides in-depth information on the interspecies interactions to better understand how THP pre-treatment influences AD microbial community.
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Role of Gamma Amino Butyric Acid (GABA) against abiotic stress tolerance in legumes: a review
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Legumes are well known for their nutritional and health benefits as well as for their impact in the sustainability of agricultural systems. Under current scenarios threatened by climate change highlights the necessity for concerted research approaches in order to develop crops that are able to cope up with environmental challenges. Various abiotic stresses such as cold, heat, drought, salt, and heavy metal induce a variety of negative effects in plant growth, development and significantly decline yield and quality. Plant growth regulators or natural products of plants are reported to be effective to improve plant tolerance to several abiotic stresses. Gamma Amino Butyric Acid (GABA) is a non-protein amino acid involved in various metabolic processes, and partially protects plants from abiotic stress. GABA appears to impart partial protection to various abiotic stresses in most plants by increasing leaf turgor, increased osmolytes and reduced oxidative damage by stimulation of antioxidants. We have compiled various scientific reports on the role and mechanism of GABA in plants against coping with various environmental stresses. We have also described the emerging information about the metabolic and signaling roles of GABA which is being used to improve legume crop against abiotic stress.
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Association and Host Selectivity in Multi-Host Pathogens
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The distribution of multi-host pathogens over their host range conditions their population dynamics and structure. Also, host co-infection by different pathogens may have important consequences for the evolution of hosts and pathogens, and host-pathogen co-evolution. Hence it is of interest to know if the distribution of pathogens over their host range is random, or if there are associations between hosts and pathogens, or between pathogens sharing a host. To analyse these issues we propose indices for the observed patterns of host infection by pathogens, and for the observed patterns of co-infection, and tests to analyse if these patterns conform to randomness or reflect associations. Applying these tests to the prevalence of five plant viruses on 21 wild plant species evidenced host-virus associations: most hosts and viruses were selective for viruses and hosts, respectively. Interestingly, the more host-selective viruses were the more prevalent ones, suggesting that host specialisation is a successful strategy for multi-host pathogens. Analyses also showed that viruses tended to associate positively in co-infected hosts. The developed indices and tests provide the tools to analyse how strong and common are these associations among different groups of pathogens, which will help to understand and model the population biology of multi-host pathogens.
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Laccase isoform diversity on basal medium in Cyathus bulleri and role in decolorization/detoxification of textile dyes and effluent
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Laccases (EC 1.10.3.2) are multi-copper oxidases that can degrade several xenobiotics, including textile dyes. Present study investigated the nature of laccase isoforms induced by 2,6-dimethylaniline in Cyathus bulleri cultivated on basal salt medium. Two isoforms, LacI and LacII were identified and purified by a combination of ultrafiltration and ion-exchange chromatography. The MS spectrum of the two proteins displayed a number of non-identical and identical molecular peaks (m/z), and, the latter were mapped to protein originating from the previously reported Laccase (Lcc) 1 gene. The LacI isoform exhibited higher catalytic efficiency (Kcat/Km) towards 2,2'-azino-bis (3-ethylbenzothiazoline-6-sulfonic acid), 2,6-dimethoxyphenol, guaiacol and pyrogallol and was tolerant to high levels of chloride ions and resistant to EDTA. Higher decolorization of several dyes such as Direct Scarlet B (67%), Reactive Brilliant blue-R (96%), Direct Orange 34 (50%) and Reactive Red198 (95%) by the LacI isoform makes it a good candidate for degradation of synthetic dyes. The decolorization of Direct Orange 34 by laccases is being reported for the first time. Many of the properties exhibited by this isoform make it a good candidate for large scale production and applications for use in the dyeing industry.
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Comparative Integumentary Morphology in Four Species of Pipa (Anura: Pipidae) from Colombia
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As most neotropical pipids, the four species of Pipa present in Colombia are poorly understood despite their particular biology. The tegument of these New-World pipids presents particular structures which variations have been hardly analyzed. Therefore, we aim to describe the morphological variations of the dermal flap, barbels, fingertips, and the lateral line pattern among these four species, focusing on changes during the ontogeny. The results of the study show that the dermal flap was exclusively found in P. pipa, while barbels are usually present in P. pipa but seldom in P. snethlageae. The lateral line pattern in the dorsum is shared by the four species, but P. pipa present more neuromast lines along the snout than P. snethlageae. These species were different from P. parva and P. myersi, which cannot be distinguished based on external morphology, as they were more similar in all lateral line elements and exhibited the same fingertip morphology. On the other hand, the fingertips of young individuals of P. pipa and P. snethlageae presented four simple distal lobes which bifurcate twice during the ontogeny, so that adults present sixteen lobes. The difference between species is observed in the fingertip morphology: P. pipa has all four lobes distally placed, but P. snethlageae has one pair more proximal. The tegument structures analyzed here have a taxonomic utility using external morphology for P. pipa and P. snethlageae, but for P. parva and P. myersi additional studies are necessary. For future research, evaluating the function and anatomy of these structures is important to the understanding these integumentary structures in Pipa.(AU)
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Wetland Restoration with Hydrophytes: A Review
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Restoration cases with hydrophytes (those which develop all their vital functions inside the water or very close to the water surface, e.g., flowering) are less abundant compared to those using emergent plants. Here, I synthesize the latest knowledge in wetland restoration based on revegetation with hydrophytes and stress common challenges and potential solutions. The review mainly focusses on natural wetlands but also includes information about naturalized constructed wetlands, which nowadays are being used not only to improve water quality but also to increase biodiversity. Available publications, peer-reviewed and any public domain, from the last 20 years, were reviewed. Several countries developed pilot case-studies and field-scale projects with more or less success, the large-scale ones being less frequent. Using floating species is less generalized than submerged species. Sediment transfer is more adequate for temporary wetlands. Hydrophyte revegetation as a restoration tool could be improved by selecting suitable wetlands, increasing focus on species biology and ecology, choosing the suitable propagation and revegetation techniques (seeding, planting). The clear negative factors which prevent the revegetation success (herbivory, microalgae, filamentous green algae, water and sediment composition) have to be considered. Policy-making and wetland restoration practices must more effectively integrate the information already known, particularly under future climatic scenarios.
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Role of Xanthoceras sorbifolium MYB44 in tolerance to combined drought and heat stress via modulation of stomatal closure and ROS homeostasis.
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Yellowhorn (Xanthoceras sorbifolium) is an important edible woody oil tree species that is endemic to China. Drought and heat stresses are factors severely limiting the high-quality development of the yellowhorn industry. Transcription factors (TFs) play critical roles in regulating the response of woody plant species to water deficit or high temperature. However, the MYB TFs that respond to combined drought and heat stress in yellowhorn remain unclear. Here, we first investigated the physiological changes in 5 yellowhorn varieties in response to combined stress treatments. We observed significant changes in antioxidant enzyme activities and photosynthesis. The Maigaiti variety yielded the best results and was selected for subsequent experiments. An R2R3-type MYB TF, designated XsMYB44, was isolated from the leaves of yellowhorn. XsMYB44 expression was strongly induced by combined stress. Suppression of XsMYB44 expression via virus-induced gene silencing weakened yellowhorn tolerance to both individual and combined drought and heat stress, and the increased susceptibility was coupled with decreased plant height, fresh weight and relative water content and inhibited stomatal closure. Moreover, compared with the individual stresses, the combined stress caused increased reactive oxygen species levels and decreased antioxidant enzyme activities and proline content in XsMYB44-silenced plants. Furthermore, the expression levels of several defense-related genes were reduced in the XsMYB44-silenced plants. Overall, we studied the physiological characteristics of 5 yellowhorn varieties, and the results demonstrated that XsMYB44 acts as a positive regulator in the yellowhorn response to combined stress by triggering stomatal closure to maintain water levels and by modulating ROS homeostasis.
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Depicting Temporal, Functional, and Phylogenetic Patterns in Estuarine Diazotrophic Communities from Environmental DNA and RNA
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Seasonally nitrogen-limited and phosphorus-replete temperate coastal waters generally host dense and diverse diazotrophic communities. Despite numerous studies in marine systems, little is known about diazotrophs and their functioning in oligohaline estuarine environments. Here we applied a combination of nifH transcript and metagenomic shotgun sequencing approaches to investigate temporal shifts in taxonomic composition and nifH activity of size-fractionated diazotrophic communities in a shallow and mostly freshwater coastal lagoon. Patterns in active nifH phylotypes exhibited a clear seasonal succession, which reflected their different tolerances to temperature change and nitrogen (N) availability. Thus, in spring, heterotrophic diazotrophs (Proteobacteria) dominated the nifH phylotypes, while increasing water temperature and depletion of inorganic N fostered heterocystous Cyanobacteria in summer. Metagenomic data demonstrated four main N-cycling pathways and three of them with a clear seasonal pattern: denitrification (spring) â N2 fixation (summer) â assimilative NO3- reduction (fall), with NH4+ uptake into cells occurring across all seasons. Although a substantial denitrification signal was observed in spring, it could have originated from the re-suspended benthic rather than planktonic community. Our results contribute to a better understanding of the realized genetic potential of pelagic N2 fixation and its seasonal dynamics in oligohaline estuarine ecosystems, which are natural coastal biogeochemical reactors.
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Characteristics of microbial community of soil subjected to industrial production of antibiotics.
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Ecosystems worldwide are exposed to pollutants connected to the industrial production of pharmaceuticals. The objective of this study was to study the composition and characteristics of the soil microbial communities that had been exposed to long-term selection pressure caused by the industrial production of penicillin G. Soil samples from four sites among the penicillin G production plant were analysed using 16S rRNA profiling via Illumina MiSeq platform and were compared with the control samples from four sites outside the plant. Total metagenomic DNA from the impacted soil was also used for the preparation of E. coli T1R-based fosmid library which was consequently qualitatively tested for the presence of penicillin G acylase (PGA)-encoding genes using the method of sequence homology. Analyses of alpha diversity revealed that the long-term antibiotic presence in the soil significantly increased the microbial diversity and richness in terms of Shannon diversity index (p = 0.002) and Chao estimates (p = 0.004). Principal component analysis showed that the two types of communities (on-site and control) could be separated at the phylum, class and genus level. The on-site soil was enriched in Betaproteobacteria, Deltaproteobacteria, Gemmatimonadetes, Acidobacteria and Planctomycetia, while a significant decrease in Actinobacteria was observed. Metagenomic fosmid library revealed high hit rates in identifying PGAs (14 different genes identified) and confirmed the biotechnological potential of soils impacted by anthropogenic activity. This study offers new insights into the changes in microbial communities of soils exposed to anthropogenic activity as well as indicates that those soils may represent a hotspot for biotechnologically interesting targets.
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Agronomic characteristics, chemical composition and quality of the silage of eigth corn cultivars/ Características agronômicas, composição química e qualidade de silagem de oito cultivares de milho
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The experiment was conducted at the Animal Science Institute (Instituto de Zootecnia), Nova Odessa and Apta Regional, Ribeirão Preto, S.P, for agronomic evaluations of eight corn cultivars and their silages. Using randomized blocks design with three replications it was estimated the plant population, number of ears by lineal meter, plant and ears height, green matter and dry matter production and percentage of grains in the dry matter. It was determined N-NH3, pH, organic acids, DM, CP, MM, NDF, ADF, lignin and in vitro digestibility of organic matter (IVDOM) in the silages. No influence of cultivars was observed for plant population and number of ears by lineal meter, however, differences occurred for plants and ears heights, green matter production and percentage of grains in DM. All the silages presented DM above of 35% with exception for P30F80. No statistical difference was found for CP, EE, MM, IVDOM, Lignin and N-FDA. There were difference in the NDF, N-NDF, ADF, N-NH3, lactic acid, acetic acid contents and pH values among cultivars. The most productive cultivar was XB8028. All the silages presented chemical characteristics that characterize them as good quality silages.
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Biodegradation of Expanded Polystyrene by Larval and Adult Stages of Tenebrio molitor with Varying Substrates and Beddings
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ABSTRACT: Tenebrio molitor, a species of darkling beetle, is capable of metabolizing expanded polystyrene (EPS), a durable single-use plastic, when in its larval stage, mealworms. EPS consumption studies were conducted on mealworm, beetle, and co-culture habitats with a one-week acclimation period and a three-week experimentation period to compare the EPS consumption rate at each stage. Subsequent experiments tested various beddings (oats, beads), supplemental nutrients (spinach, protein powder paste, cucumbers, lemon slices), and EPS pre-treatments (lemon-lime soda, lemon juice, tomato paste) to determine the effect of those variations on mealworm EPS consumption. It was concluded that one mealworm consumes EPS at least fifty times faster than one beetle. EPS biodegradation rates were estimated under the assumption that 48.2% of consumed EPS was biodegraded by mealworm gut bacteria into carbon dioxide and biomass. It was found that EPS biodegradation rates increased 34.8% in habitats with inedible bead beddings compared to those with an edible oat bedding. EPS biodegradation rates by mealworms were also seen to increase 482% in habitats where the EPS was pre-treated with lemon-lime soda and 125% in habitats with a spinach supplemental nutrient compared to EPS biodegradation rates in a habitat with no supplemental nutrient or pre-treatment. Each supplemental nutrient and EPS pre-treatment variation in an individual inedible bead bedding improved the mealworm consumption rate of EPS. It was determined that approximately four mealworms could degrade EPS at least as quickly as natural biodegradation. These findings suggest that habitat conditions strongly affect EPS consumption rates by mealworms. HIGHLIGHTS: • Mealworm consumption rates of EPS are fifty times greater than those of beetles. • Mealworm EPS consumption rates are lower in edible beddings than inedible beddings. • EPS consumption rates by T. molitor improved with cups pre-treated in acidic media. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s40710-021-00556-6.
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Sorghum breeding in the genomic era: opportunities and challenges
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KEY MESSAGE: The importance and potential of the multi-purpose crop sorghum in global food security have not yet been fully exploited, and the integration of the state-of-art genomics and high-throughput technologies into breeding practice is required. ABSTRACT: Sorghum, a historically vital staple food source and currently the fifth most important major cereal, is emerging as a crop with diverse end-uses as food, feed, fuel and forage and a model for functional genetics and genomics of tropical grasses. Rapid development in high-throughput experimental and data processing technologies has significantly speeded up sorghum genomic researches in the past few years. The genomes of three sorghum lines are available, thousands of genetic stocks accessible and various genetic populations, including NAM, MAGIC, and mutagenised populations released. Functional and comparative genomics have elucidated key genetic loci and genes controlling agronomical and adaptive traits. However, the knowledge gained has far away from being translated into real breeding practices. We argue that the way forward is to take a genome-based approach for tailored designing of sorghum as a multi-functional crop combining excellent agricultural traits for various end uses. In this review, we update the new concepts and innovation systems in crop breeding and summarise recent advances in sorghum genomic researches, especially the genome-wide dissection of variations in genes and alleles for agronomically important traits. Future directions and opportunities for sorghum breeding are highlighted to stimulate discussion amongst sorghum academic and industrial communities.
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Bioaccumulation of Organochlorine Pesticides, Procamallanus sp. (Baylis, 1923) infections, and Microbial Colonization in African Snakehead fish Sampled from Lekki Lagoon, Lagos, Nigeria
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Abstract The exponential rise in the Nigerian population has necessitated the use of agrochemicals for enhanced agricultural yields to meet the ever-rising demand for food. However, agrochemicals such as organochlorine pesticides (OCPs) have caused several devastating health and ecological challenges. The study was therefore aimed at assessing the bioaccumulation of OCPs and the associated parasitological and microbial susceptibility in P. obscura to determine the possible ecological impacts of the chemical. A total of 106 specimens of Parachanna obscura fish species were sampled between July and November 2019 from Lekki Lagoon in Lagos, Nigeria. Four culture media, namely nutrient agar (NA), MacConkay agar (MCA), eosin methylene blue (EMB), and sabouraud dextrose agar (SDA) were employed in microbial culture. These microbes were subjected to ceftazidime, ceftriaxone, cefuroxime, gentamicin, ofloxacin, augmentin, nitrofurantoin, ciprofloxacin, and erythromycin to test for resistance, susceptibility and intermediate statuses before and after curing. OCPs were tested in the water, sediment, and tissues of P. obscura using gas chromatography flame ionization detector (GC-FID). P. obscura sampled in the lagoon had poor growth exponent which was characterized by negative allometry (slenderness) in the sampled fish. Although the incidence of parasitic infection in the fish was not alarming, the situation might be aggravated if the prevalent anthropogenic activities persist, resulting in immunosuppression. Regulation of anthropogenic activities in the catchment area is recommended to forestall the prognosis of health and environmental hazards associated with the agricultural, industrial, pharmaceutical, and municipal activities around the lagoon. Bacteria that conferred the most resistance to the majority of the antibiotics were Staphylococcus sp., Micrococcus sp. Escherichia coli and Klebsiella sp., testing positive to plasmid profile. They conferred high resistance to the antibiotics before plasmid curing but became highly susceptible post- plasmid curing. This implies that the gene for resistance in the bacteria isolates was plasmid-mediated, that is, they were obtained from the environment. In the event of an outbreak of waterborne diseases such as cholera, typhoid, dysentery, and diarrhea, there may be non-response to treatment among the infected inhabitants. The incidence of antibiotic resistance in bacteria colonies recorded in this study is of great public health concern, given the possibility of the antibiotic-resistant bacteria strains being passed to humans through fish consumption, resulting in increased multi-drug resistance in humans. Regulation of anthropogenic activities around the lagoon is recommended to forestall prognosis of health and environmental hazards associated with OCPs from agricultural, industrial, pharmaceutical, and municipal sources.
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Abundance and Diversity of Ophiostomatoid Fungi Associated With the Great Spruce Bark Beetle (Dendroctonus micans) in the Northeastern Qinghai-Tibet Plateau
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The role of several virulent tree pathogens in host death has been overlooked because of the aggressiveness of their associated bark beetles. The great spruce bark beetle (Dendroctonus micans) is a widely distributed beetle that infests coniferous plants in Eurasia; however, its associated fungi have been poorly studied. Therefore, in this study, we elucidated the diversity of ophiostomatoid fungi associated with D. micans in the northeastern Qinghai-Tibet Plateau through field investigation, laboratory isolation, and culture analyses. A total of 220 strains of ophiostomatoid fungi were isolated from adults and tunnel galleries of D. micans infesting Picea crassifolia. We identified that the isolated strains belonged to eight ophiostomatoid species, including five new species (Ophiostoma huangnanense sp. nov., Ophiostoma maixiuense sp. nov., Ophiostoma sanum sp. nov., Leptographium sanjiangyuanense sp. nov., and Leptographium zekuense sp. nov.), one undefined species (Ophiostoma sp. 1), and two known species (Ophiostoma bicolor and Endoconidiophora laricicola), using phylogenetic analysis of multigene DNA sequences and morphological characteristics. This is the first time that E. laricicola, a pioneer invader and virulent pathogen, has been reported in China. We found that E. laricicola was the dominant species, accounting for 40.91% of the total number of ophiostomatoid communities. This study enriched the knowledge of the fungal associates of D. micans and elucidated that it carried the virulent pathogen E. laricicola at a surprisingly high frequency. Our findings show increased species association between D. micans and ophiostomatoid fungi and provide a basis for understanding the occurrence of forest diseases and pests.
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Maladaptation of U.S. corn and soybeans to a changing climate.
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We quantify long-run adaptation of U.S. corn and soybean yields to changes in temperature and precipitation over 1951-2017. Results show that although the two crops became more heat- and drought-tolerant, their productivity under normal temperature and precipitation conditions decreased. Over 1951-2017, heat- and drought-tolerance increased corn and soybean yields by 33% and 20%, whereas maladaptation to normal conditions reduced yields by 41% and 87%, respectively, with large spatial variations in effects. Changes in climate are projected to reduce average corn and soybean yields by 39-68% and 86-92%, respectively, by 2050 relative to 2013-2017 depending on the warming scenario. After incorporating estimated effects of climate-neutral technological advances, the net change in yield ranges from (-)13 to 62% for corn and (-)57 to (-)26% for soybeans in 2050 relative to 2013-2017. Our analysis uncovers the inherent trade-offs and limitations of existing approaches to crop adaptation.
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Responses and sensitivities of maize phenology to climate change from 1971 to 2020 in Henan Province, China
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Climate change affects many aspects of the physiological and biochemical processes of growing maize and ultimately its yield. A comprehensive climate suitability model is proposed that quantifies the effects of temperature, precipitation, solar radiation, and wind in different phenological stages of maize. It is calibrated using weather and yield data from China's Henan Province. The comprehensive suitability model showed the capability of correctly hindcasting observed temporal and spatial changes in maize phenology in response to climatic factors. The predicted yield based on the suitability model can well match the recorded field yield very well from 1971-2020. The results of correlation showed that the yields are more closely related to multi-weather factors, temperature and precipitation than to solar radiation and wind. The sensitivity analysis illustrates that temperature and precipitation are the dominant weather factors affecting yield changes based on a direct differentiation method. The comprehensive suitability model can provide a scientific support and analysis tool for predicting grain production considering climate changes.
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Advantages of Laboratory Natural Selection in the Applied Sciences.
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In the past three decades laboratory natural selection has become a widely used technique in biological research. Most studies which have utilized this technique are in the realm of basic science, often testing hypotheses related to mechanisms of evolutionary change or ecological dynamics. While laboratory natural selection is currently utilized heavily in this setting, there is a significant gap with its usage in applied studies, especially when compared to the other selection experiment methodologies like artificial selection and directed evolution. This is despite avenues of research in the applied sciences which seem well suited to laboratory natural selection. In this commentary we place laboratory natural selection in context with other selection experiments, identify the characteristics which make it well suited for particular kinds of applied research, and briefly cover key examples of the usefulness of selection experiments within applied science. Finally, we identify three promising areas of inquiry for laboratory natural selection in the applied sciences: bioremediation technology, identifying mechanisms of drug resistance, and optimizing biofuel production. Although laboratory natural selection is currently less utilized in applied science when compared to basic research, the method has immense promise in the field moving forward.
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Poisoning by agricultural pesticides in the state of Goiás, Brazil, 2005-2015: analysis of records in official information systems.
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The effect of pesticide use on human health is a problem that has received attention from the scientific community worldwide, especially in central countries, where the highest number of deaths due to human exposure to these agents is observed. Production and productivity increased through the progress of agro-industrialization, but risks to the environment and health were not taken into account. Over time, several cases of environmental contamination and public health problems, poisoning of rural workers, and food residues were observed. These factors triggered the recognition of risks arising from pesticide abuse. This study aimed to characterize pesticide poisonings reported to a toxicological information center of the state of Goiás through a retrospective analysis from 2005 to 2015. Data were mapped and tabulated by the purpose of pesticides, the circumstance of poisoning, and case development. The poisoning profile pointed to a higher occurrence of work- and suicide-related poisonings, with a predominance of poisoned patients, although chronic effects were not recorded, suggesting a false diagnosis of cure.
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Development and characterization of 20 polymorphic microsatellite markers for the white-bellied pangolin Phataginus tricuspis (Mammalia, Pholidota)
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Pangolins, or scaly anteaters, have recently been flagshiped as one of the most illegally traded mammals, and as a corollary, as potential intermediate hosts at the origin of the COVID-19 pandemic. In order to improve the traceability of their trade, we developed 20 polymorphic microsatellite loci for the white-bellied pangolin (Phataginus tricuspis), the species most frequently found on African bushmeat markets. We genotyped 24 white-bellied pangolins from the Douala market, Cameroon, originating from the Ebo forest c. 75 km north-east of Douala. The number of alleles per locus ranged from 4 to 12 (mean = 6.95), and mean observed and expected heterozygosities were 0.592 (0.208-0.875) and 0.671 (0.469-0.836), respectively. Genetic diversity was higher than that cross-estimated from microsatellite loci developed for other species of pangolins. Two loci deviated from Hardy-Weinberg equilibrium and two loci showed linkage disequilibrium. Genetic variance (PCoA) was increased with the addition of 13 pangolins of unknown origin, possibly suggesting that the Douala market is fed from differentiated source populations of white-bellied pangolins. Each of the 37 individuals had a unique multilocus genotype. The unbiased probability of identity (uPI) and the probability of identity among siblings (PIsibs) were both very low (uPI = 8.443 e-21; PIsibs = 1.011 e-07). Only five microsatellite loci were needed to reach the conservative value of PIsibs < 0.01, overall indicating a powerful discriminating power of our combined loci. These 20 newly developed microsatellite loci might prove useful in tracing the local-to-global trade of the white-bellied pangolin, and will hopefully contribute to the DNA-assisted implementation of future conservation strategies at reasonable costs.
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Profitability indicators of milk production cost center in intensive systems of production/ Indicadores de rentabilidade do centro de custo produção de leite em sistemas intensivos de produção
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The objective was to estimate some profitability indicators of dairy cost center farms with a high volume of daily production in feedlot. The Intended was also to identify the components that had the greatest influence on the operational cost. We used data from three milk systems production, with the origin of the purebred Holsteins. It was considered as a milk cost center production all expenses related in lactating and dry cows. The methodology used total cost and operating cost in profitability analysis. A production system, by presenting gross margin, net positive result, was able to produce short, medium and long term. Another production system had a positive gross margin and net, with conditions to survive in the short and medium term. Finally, the third system of production has shown a negative gross margin presenting decapitalizing and entering into debt, as revenues were not enough to pay operating expenses even effective. The component items of the effective operational cost that exercised higher impact cost and income from milk were, in decreasing order, the feeding, labor, miscellaneous expenses, sanitation, energy, milking, reproduction, equipment rental, BST and taxes.
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Experimental evidence for delayed post-conflict management behaviour in wild dwarf mongooses
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In many species, within-group conflict leads to immediate avoidance of potential aggressors or increases in affiliation, but no studies have investigated delayed post-conflict management behaviour. Here, we experimentally test that possibility using a wild but habituated population of dwarf mongooses (Helogale parvula). First, we used natural and playback-simulated foraging displacements to demonstrate that bystanders take notice of the vocalisations produced during such within-group conflict events but that they do not engage in any immediate post-conflict affiliative behaviour with the protagonists or other bystanders. We then used another playback experiment to assess delayed effects of within-group conflict on grooming interactions: we examined affiliative behaviour at the evening sleeping burrow, 30-60 min after the most recent simulated foraging displacement. Overall, fewer individuals groomed on evenings following an afternoon of simulated conflict, but those that did groomed more than on control evenings. Subordinate bystanders groomed with the simulated aggressor significantly less, and groomed more with one another, on conflict compared to control evenings. Our study provides experimental evidence that dwarf mongooses acoustically obtain information about within-group contests (including protagonist identity), retain that information, and use it to inform conflict-management decisions with a temporal delay.
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Yield gap in milk production is considerable in Indian Himalayan state of Meghalaya.
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Yield gaps in milk production are here defined as the differentials between the actual yield obtained by the dairy farmer and the potential farm yield (production achieved by the top 10% of farmers: Gap 2) as well as the differential between this potential farm yield and the yield registered in the research stations (Gap 1). Assessment of yield gaps provides valuable information on potential production enhancement and drivers behind yield gaps. Milk production can be increased by narrowing the predominant large yield gaps in resource-poor smallholder farming system. Hence, this study assessed the milk yield gap and factors affecting the yield gap in Ri-Bhoi district of Meghalaya, a state located in the north-eastern Himalayan region of India. This research paper provides a scope for exploring the possibilities for improving dairy production in the state as well as contributing to literature through incorporating crucial determinants responsible for milk yield gap. A sample of 81 respondents was drawn purposely from two blocks of the district. The results indicated that the average number of cattle per household was 9.38 in standard animal units. The total yield gap was estimated at 6.20 l (91.06%) per day, composed of 0.80 l (11.76%) per day of yield gap I and 5.40 l (79.30%) per day of yield gap II. This demonstrates that the top performing farms were achieving a production level not dissimilar to that obtained on the research stations, but many were doing far less well. The size of cattle shed, dairy farming experience, concentrate price and human labour were the important determinants of the yield gap. Hence, encouraging the right stocking density of cattle, training on the preparations of home-made concentrates, access to cheap and quality concentrates, incorporating training and experience sharing on proper dairy management practices and use of technology could benefit the dairy farmers of the region.
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Analysis of wild plant pathogen populations reveals a signal of adaptation in genes evolving for survival in agriculture in the beet rust pathogen (Uromyces beticola)
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Improvements in crop resistance to pathogens can reduce yield losses and address global malnourishment today. Gene-for-gene -type interactions can identify new sources of resistance but genetic resistance is often short lived. Ultimately an understanding of how pathogens rapidly adapt will allow us to both increase resistance gene durability and more effectively target chemical treatments. Until recently all agricultural pathogens were living on wild hosts. To understand crop pathogen evolution, we compared genetic diversity in agricultural and wild populations. Wild reservoirs may be the source of emergent pathogen lineages, but here we outline a strategy for comparison of wild and agricultural pathogen populations to highlight genes adapting to agriculture. To address this, we have selected and developed the beet rust system (Beta vulgaris, Uromyces beticola, respectively) as our wild-agricultural model. Our hypothesis is that pathogen adaptation to agricultural crops will be evident as divergence in comparisons of wild and agricultural plant pathogen populations. We sampled isolates in both the wild and agriculture, sequenced and assembled and annotated a large fungal genome and analysed genetic diversity in 42 re-sequenced rust isolates. We found population differentiation between isolates in the wild compared to a predominantly agricultural group. Fungal effector genes are co-evolving with host resistance and are important for successful colonisation. We predicted (and found) that these exhibit a greater signal of diversification and adaptation and more importantly displayed increased wild agricultural divergence. Finding a signal of adaptation in these genes highlights this as an important strategy to identify genes which are key to pathogen success, that analysis of agricultural isolates alone cannot. Author Summary As quickly as we develop new strategies for crop defence, pathogens evolve to circumvent them. Novel crop pathogen strains emerge periodically and sweep through the agricultural system. However, because of the (often) clonal nature of these crop pathogens it is difficult to identify the trait that is key to their success. In other words, if there is a trait that is key for success in agriculture, all agricultural isolates will have it (or die without it). What we need is a case and control system where we identify genes important to pathogen success in agricultural by comparing them to pathogens that live in the wild. Here we exemplify this strategy by focussing on genes already known to specifically adapt for the successful colonisation of the host, the fungal effector genes. We find that these genes appear to be evolving quickly and that they are more different between the wild and agriculture than other non-effector genes. These differences between wild and agricultural pathogens suggest we are observing adaptation to agriculture. We do this work in the sugar beet rust system because of its tractability to sample but this understanding about how to identify genetic variation that is key to pathogen success in agriculture is applicable to crop systems where pathogen reservoirs exist as well as other pathogen reservoir systems (e.g. zoonoses).
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Quantitative Determination and Environmental Risk Assessment of 102 Chemicals of Emerging Concern in Wastewater-Impacted Rivers Using Rapid Direct-Injection Liquid Chromatography—Tandem Mass Spectrometry
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The rapid source identification and environmental risk assessment (ERA) of hundreds of chemicals of emerging concern (CECs) in river water represent a significant analytical challenge. Herein, a potential solution involving a rapid direct-injection liquid chromatography–tandem mass spectrometry method for the quantitative determination of 102 CECs (151 qualitatively) in river water is presented and applied across six rivers in Germany and Switzerland at high spatial resolution. The method required an injection volume of only 10 µL of filtered sample, with a runtime of 5.5 min including re-equilibration with >10 datapoints per peak per transition (mostly 2 per compound), and 36 stable isotope-labelled standards. Performance was excellent from the low ng/L to µg/L concentration level, with 260 injections possible in any 24 h period. The method was applied in three separate campaigns focusing on the ERA of rivers impacted by wastewater effluent discharges (1 urban area in the Basel city region with 4 rivers, as well as 1 semi-rural and 1 rural area, each focusing on 1 river). Between 25 and 40 compounds were quantified directly in each campaign, and in all cases small tributary rivers showed higher CEC concentrations (e.g., up to ~4000 ng/L in total in the R. Schwarzach, Bavaria, Germany). The source of selected CECs could also be identified and differentiated from other sources at pre- and post- wastewater treatment plant effluent discharge points, as well as the effect of dilution downstream, which occurred over very short distances in all cases. Lastly, ERA for 41 CECs was performed at specific impacted sites, with risk quotients (RQs) at 1 or more sites estimated as high risk (RQ > 10) for 1 pharmaceutical (diclofenac), medium risk (RQ of 1–10) for 3 CECs (carbamazepine, venlafaxine, and sulfamethoxazole), and low risk (RQ = 0.1–1.0) for 7 CECs (i.e., RQ > 0.1 for 11 CECs in total). The application of high-throughput methods like this could enable a better understanding of the risks of CECs, especially in low flow/volume tributary rivers at scale and with high resolution.
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Confounding Rules Can Hinder Conservation: Disparities in Law Regulation on Domestic and International Parrot Trade within and among Neotropical Countries
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SIMPLE SUMMARY: Wildlife trade represents one of the main causes of biodiversity loss worldwide. In an attempt to control this practice, both international and national legislation has been adopted to regulate trapping and trade in wild animals. For parrots, one of the most traded bird orders, the Convention on International Trade in Endangered Species of Wild Fauna and Flora (CITES) has regulated their international legal trade since 1975. However, wildlife regulations within Neotropical countries—the main sources for the past international trade—vary widely and differ from the international ones. This complex legislative framework translates into a lack of knowledge on the legal status of this activity in many countries, including within the scientific community. This confusion may be increasing the conservation problems of many vertebrate groups. ABSTRACT: Wildlife trade is a major driver of biodiversity loss worldwide. To regulate its impact, laws and regulations have been implemented at the international and national scales. The Convention on International Trade in Endangered Species of Wild Fauna and Flora (CITES) has regulated the international legal trade since 1975. However, an important volume of illegal trade—mainly within countries—continues to threaten several vertebrate groups, which could be due to a lack of specific legislation or enforcement of existing regulations. Our aim was to gain a more accurate picture of poaching and legal possession of native parrots as pets in the Neotropics, where illegal domestic trade is currently widespread. We conducted a systematic search of the laws of each of the 50 countries and overseas territories, taking into account their year of implementation and whether the capture, possession and/or sale of parrots is permitted. We compared this information with legal exports reported by CITES to assess differences between the enforcement of international and national trade regulations. We found that only two countries (Guyana and Suriname) currently allow the capture, trade and possession of native parrots, while Peru allowed international legal trade until recently. The other countries have banned parrot trade from years to decades ago. However, the timing of implementation of international and national trade regulations varied greatly between countries, with half of them continuing to export parrots legally years or decades after banning domestic trade. The confusion created by this complex legal system may have hindered the adoption of conservation measures, allowing poaching, keeping and trade of protected species within and between neighboring countries. Most countries legally exported Neotropical parrot species which were not native to those countries, indicating that trans-border smuggling often occurred between neighboring countries prior to their legal exportations, and that this illicit activity continues for the domestic trade. Governments are urged to effectively implement current legislation that prohibits the trapping and domestic trade of native parrots, but also to develop coordinated alliances and efforts to halt illegal trade among them. Otherwise, illegal trade will continue to erode the already threatened populations of a large number of parrot species across the Neotropics.
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Genome-Wide Investigation of the Cysteine Synthase Gene Family Shows That Overexpression of CSase Confers Alkali Tolerance to Alfalfa (Medicago sativa L.)
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Alfalfa is widely grown worldwide as a perennial high-quality legume forage and as a good ecological landcover. The cysteine synthase (CSase) gene family is actively involved in plant growth and development and abiotic stress resistance but has not been systematically investigated in alfalfa. We identified 39 MsCSase genes on 4 chromosomes of the alfalfa genome. Phylogenetic analysis demonstrated that these genes were clustered into six subfamilies, and members of the same subfamily had similar physicochemical properties and sequence structures. Overexpression of the CSase gene in alfalfa increased alkali tolerance. Compared with control plants, the overexpression lines presented higher proline, soluble sugars, and cysteine and reduced glutathione contents and superoxide dismutase and peroxidase activities as well as lower hydrogen peroxide and superoxide anion contents after alkali stress. The relative expression of γ-glutamyl cysteine synthetase gene (a downstream gene of CSase) in the overexpression lines was much higher than that in the control line. The CSase gene enhanced alkalinity tolerance by regulating osmoregulatory substances and improving antioxidant capacity. These results provide a reference for studying the CSase gene family in alfalfa and expanding the alkali tolerance gene resources of forage plants.
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Consumers' preferences for intrinsic and extrinsic product attributes of plant-based eggs: an exploratory study in the United Kingdom and Italy
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PurposePlant-based eggs have recently been developed to provide consumers with a healthier, animal-friendlier and more sustainable alternative to conventional eggs. The purpose of this paper is to investigate intrinsic and extrinsic attribute preferences for three prototypes of plant-based egg, namely the liquid, powder and egg-shaped.Design/methodology/approachNine focus groups in the United Kingdom and nine in Italy were conducted, with a total of 180 participants. A thematic analysis of results was conducted.FindingsIn terms of intrinsic product attributes, consumers' preferences for colour, shape, taste, ingredients, nutrients, method of production and shelf-life for plant-based eggs were revealed. Regarding the extrinsic attributes, preferences for price, packaging, country of origin and product naming emerged. Similarities and differences between consumers from the two countries are also discussed. Differences in preferences also emerged between vegan and non-vegan consumers.Research limitations/implicationsThis study adds to the existing knowledge on consumers' preferences for new plant-based food alternatives and identifies future quantitative approaches based on qualitative findings.Practical implicationsResults from this study can assist plant-based egg manufacturers in improving their products in line with consumers' expectations, which may help reducing risk of product failure.Originality/valueThis study is the first to investigate consumers' preferences, expectations and needs for new food products like plant-based eggs and provides information that can be practically applied by manufacturers, as well as suggestions for future research.
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Does reduced MHC diversity decrease viability of vertebrate populations?
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Loss of genetic variation may render populations more vulnerable to pathogens due to inbreeding depression and depletion of variation in genes responsible for immunity against parasites. Here we review the evidence for the significance of variation in genes of the Major Histocompatibility Complex (MHC) for conservation efforts. MHC molecules present pathogen-derived antigens to the effector cells of the immune system and thus trigger the adaptive immune response. Some MHC genes are the most variable functional genes in the vertebrate genome. Their variation is clearly of adaptive significance and there is considerable evidence that its maintenance is mainly due to balancing selection imposed by pathogens. However, while the evidence for selection shaping MHC variation on the historical timescale is compelling, a correlation between levels of MHC variation and variation at neutral loci is often observed, indicating that on a shorter timescale drift also substantially affects MHC, leading to depletion of MHC diversity. The evidence that the loss of MHC variation negatively affects population survival is so far equivocal and difficult to separate from effects of general inbreeding. Some species with depleted MHC variation seem to be particularly susceptible to infection, but other species thrive and expand following severe bottlenecks that have drastically limited their MHC variation. However, while the latter demonstrate that MHC variation is not always critical for population survival, these species may in fact represent rare examples of survival despite of the loss of MHC variation. There is clearly a compelling need for data that would disclose the possible consequences of MHC diversity for population viability. In particular, we need more data on the impact of MHC allelic richness on the abundance of parasites or prevalence of disease in populations, while controlling for the role of general inbreeding. Before such evidence accumulates, captive breeding programs and other conservation measures aimed at inbreeding avoidance should be favoured over those protecting only MHC variation, especially since inbreeding avoidance programs would usually conserve both types of genetic diversity simultaneously.
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Common ground: The foundation of interdisciplinary research on bat disease emergence
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Human perturbation of natural systems is accelerating the emergence of infectious diseases, mandating integration of disease and ecological research. Bats have been associated with recent zoonoses, but our bibliometric analysis of coauthor relationships identified a separation of bat ecologists and infectious disease researchers with few cross-disciplinary relationships. Of 5,645 papers, true interdisciplinary collaborations occurred primarily in research focused on White Nose Syndrome (WNS). This finding is important because it illustrates how research with outcomes favoring both bat conservation and disease mitigation promotes domain integration and network connectivity. We advocate for increased engagement between ecology and infectious researchers to address such common causes and suggest that efforts focus on leveraging existing activities, building interdisciplinary projects, and networking individuals and networks to integrate domains and coordinate resources. We provide specific opportunities for pursuing these strategies through the Bat One Health Research Network (BOHRN).
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Effect of restricting feeding time and enzyme supplementation on the productivity of post peaked laying hens/ Limitação do tempo e suplementação enzimática no arroçoamento de galinhas em gaiolas após pico de postura
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This experiment was conducted at the Posto de Avicultura de Brotas, State of São Paulo, Brazil, in order to evaluate the effect of restrictive feeding time and enzyme supplementation on the productivity of post-peaked laying hens. The birds had access to feed for four hours (7 to 9 am and 1 to 3 pm), six hours (7 to 10 pm and 1 to 4 pm) or ad libitum. Enzyme supplementation did not influence egg production, egg weight or feed conversion. The highest egg production was observed in the birds fed ad libitum but was statically different only from the one observed in the birds fed for four hours (P 0.05). The treatments did not affect egg weight: The best feed conversion was observed in the birds that had access to the feed for six hours and was different only from the feed conversion present by full fed birds (P 0.05).
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Notes on the natural history of Phyllops falcatus (Gray, 1839) (Phyllostimidae: Stenodermatinae) in Cuba
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The genus Phyllops is endemic of the Greater Antilles. Jones and Baker (1976) and Hall (1981) considered the genus to be polytypic, with two species, Phyllops falcatus endemic to Cuba and P. haitiensis endemic to Hispaniola. Koopman (1989) grouped the two species, making P. haitiensis a subspecies of P. falcatus. Relative to other bats found in the West Indies, which have some degree of threatened status (IUCN 1996), little is know about the basic biology and natural history of Phyllops falcatus. So far, the greatest amount of information gathered on the biology of this species is in Silva Taboada (1979); however, there is insufficient data there. The objective of this paper is to contribute to the knowledge on the basic natural history of Phyllops falcatus populations found in Cuba.
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A review on the current status and post-pandemic prospects of third-generation biofuels
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The rapid increase in fossil fuel depletion, environmental degradations, and industrialization have encouraged the need and production of sustainable fuel alternatives. This has led to the increase in interest in biofuels, especially third-generation biofuels produced from microalgae since they do not compete with food and land supplies. However, the global share for these biofuels has been inadequate recently, especially due to the ongoing global pandemic. Therefore, this paper offers a review of the state-of-the-art study of the production field of third-generation biofuel from microalgae. The current review aims to focus on the different aspects of algal biofuel production that requires further attention to produce it at a large scale. It was found that several strategies during the life cycle of algal biofuel production can significantly increase its quality and yield while reducing cost, energy, and other related attributes. This paper also focuses on the challenges for large-scale production of third-generation biofuels pre and post COVID-19 to better understand the barriers. The high cost of this fuel’s production and sale tends to be the major reason behind the lack of large-scale production, hence, inadequacy to meet the global need. Third-generation biofuel has so much to offer including many integrated applications and advanced uses in the future fuel industry. Therefore, it is important to cope with the ongoing circumstances and emphasize the future of algal biofuel as a sustainable source.
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DNAqua‐Net conference unites participants from around the world with the quest to standardize and implement DNA‐based aquatic biomonitoring
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The EU COST Action DNAqua‐Net has since its start in 2016 gathered European researchers with the quest to standardize and implement DNA‐based aquatic biomonitoring. On March 9–11, 2021, their work culminated in their first conference. Here, an astounding 1500 participants from around the world gathered virtually to share their research on DNA‐based aquatic biomonitoring encompassing DNA reference databases, field and laboratory protocols, data analyses and storage, implementation strategy and legal issues, and biotic indices and metrics. The overwhelming interest in DNA‐based aquatic bioassessment and monitoring strongly underlines its relevance and timeliness.
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Monitoring Rhodnius neglectus (Lent, 1954) populations' susceptibility to insecticide used in controlling actions in urban areas northwest of São Paulo state.
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BACKGROUND Chagas disease (CD) is caused by the flagellate protozoan Trypanosoma cruzi and can be carried by different species of triatomines, including Rhodnius neglectus, which is wild, well distributed in Brazil, and has formed colonies in palm trees located in urban areas of municipalities in the state of São Paulo. Chemical control has been routinely used to reduce population density, but each year, there has been an increase in species dispersion and density. This study aimed to evaluate the susceptibility of insects to insecticides used in control. METHODS The reference population was collected from Araçatuba municipality, Nilce Maia. Dilutions of deltamethrin were prepared and applied to the back of the first-stage nymphs, which were biologically synchronized. The control group received pure acetone only. Mortality was assessed after 72 h. RESULTS The mortality rate with respect to diagnostic dose was 100%. The susceptibility profile observed for this population showed RR50 ranging from 1.76 to 3.632. CONCLUSIONS The populations were susceptible to the insecticides tested. It is possible that the insecticide residual effect on this ecotope has decreased the lifespan, and controlling failures may be the cause of recolonization in this environment.
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The effect of the stages of maturity on the yield and nutritional value of white oats silage/ Efeito do estádio de maturação sobre o rendimento e valor nutritivo da aveia branca no momento da ensilagem
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The objective of this experiment was to evaluate the yield plus nutritional value of white oats collected in four stages of maturity at the time of silage. In the field, the experiment was set in a complete randomized block design with five replications. The treatments were T1=initial flowering, T2=full flowering, T3=grain soft mass, T4=grain hard mass, which corresponded to 87, 103, 111 and 118 days after emergence (DAE), respectively. In silage production phase the design of the experiment was set completely at random with three replications. Due to the hight incidences of humidity, a wilting of the oats was necessary before silage began in the first 3 treatments. Different effects were observed at the times of harvest for the following variables: height of plants, green and dry matter production, total soluble sugar (TAST), crude protein, pH, IVDMD, FDA, FDN, K, Ca, P, Mg, Mn and Zn. A linear increase of dry matter, FDA and FDN were observed at the plants matured and a linear reduction of IVDMD, crude protein, K and Ca. The highest values of green matter were estimated to be 52.4t/ha, 92 DAE, plant height (124cm, 122 DAE), TAST (12.5%, 99 DAE) and pH (4.46, 99DAE); the smaller values of P were estimated to be 0.20%, 99 DAE, Mg (0.09%, 107 DAE), Mn (120mg/kg, 105 DAE) and Zn (23 mg/kg, 105 DAE). Considering the yield and the quality of oats obtained is a result of this experi
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Multivariate phenotypic divergence along an urbanization gradient
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Evidence suggests that natural populations can evolve to better tolerate the novel environmental conditions associated with urban areas. Studies of adaptive divergence in urban areas often examine one or a few traits at a time from populations residing only at the most extreme urban and nonurban habitats. Thus, whether urbanization drives divergence in many traits simultaneously in a manner that varies with the degree of urbanization remains unclear. To address this gap, we generated seed families of white clover (Trifolium repens) collected from 27 populations along an urbanization gradient in Toronto, Canada, grew them in a common garden, and measured 14 phenotypic traits. Families from urban sites had evolved later phenology and germination, larger flowers, thinner stolons, reduced cyanogenesis, greater biomass and greater seed set. Pollinator observations revealed near-complete turnover of pollinator morphological groups along the urbanization gradient, which may explain some of the observed divergences in floral traits and phenology. Our results suggest that adaptation to urban environments involves multiple traits.
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Wing morphology, flights speeds and insights into niche structure in Caribbean bats from Dominica
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We compiled data from six species in four families of Caribbean bats collected on the island of Dominica in order to explore the relation between wing morphology and flight speed. An 18.3 m flight tunnel was constructed in second growth rain forest using a concrete structure as a frame and large tarps to enclose the perimeter, leaving one end open. Bats were caught using mist nets in areas of both mature and second growth rain forest and disturbed habitats. Bats were moved to the tunnel area where morphological measurements were recorded and each bat was photographed with the wing extended. Wing area and wing span were measured using the program ImageJ. These data in combination with other morphological measurements were used to calculate aspect ratio and wing loading, which were each compared to flight speed. To measure flight speed, a bat was released in the flight tunnel and times were recorded at 6.1 m, 12.2 m, and 18.3 m. The findings reveal that flight speed shows little relation to aspect ratio, with the exception of Tadarida brasiliensis, and that flight speed increases as a function of wing loading. The comparison of aspect ratio to relative wing loading demonstrates strong ecomorphological segregation based on foraging mode.
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Urban soil health: a city-wide survey of chemical and biological properties of urban agriculture soils
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The integration of urban green spaces into modern city planning is seen as a promising tool to offset the drawbacks of ever-expanding cities. Urban agriculture is a common method to implement such strategies and to increase urban sustainability with a special focus on food security. Due to their location, urban farms are highly influenced by past and present anthropogenic activities which can threaten both soil health and food safety. This study includes 12 urban agriculture sites in the metropolitan area of Adelaide, Australia. It is the first of its kind to focus on soil health in urban agriculture systems with a further emphasis on mycorrhizal fungi. Descriptive information about each site, the biodiversity of the selected plots and soil samples from different depths and locations were collected and analysed for chemical and biological parameters. Seven metals, total and plant-available (Colwell) phosphorus and available nitrogen were measured in soils. A glasshouse bioassay was also conducted to determine the abundance of beneficial arbuscular mycorrhizal fungi in the soils and the change of root colonization after inoculation with the mycorrhizal fungus Rhizophagus irregularis. Results showed a generally high biodiversity of plants that correlated with site activity (commercial or community garden) and which could potentially be used for urban biodiversity conservation. Metal concentrations in soils were below national guidelines levels for all samples, although sites with previous industrial history showed elevated levels when compared to sites without industrial history. The use of raised beds with introduced soils eliminated differences in previous land-use history, thereby providing a good option to support cleaner production. Gardening soils were considered highly fertile, with plant-available (Colwell) P concentrations exceeding recommended levels for most horticultural crops, while soils were adequately supplied with nitrogen. Most plant nutrients were derived from freely available urban waste streams and integrated via composting. Various urban waste streams could be used to counter-act imbalanced soil nutrients. Arbuscular mycorrhizal fungi were present in all sites, indicating that the practiced soil management is sustainable from a microbial perspective. Given their important role in supporting plant nutrition, and potential to reduce the need for external nutrient inputs, they provide an important focal point for achieving clean and sustainable urban food production. The results were incorporated into a framework for the management of urban soil health.
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Deletion of the Histone Deacetylase HdaA in Endophytic Fungus Penicillium chrysogenum Fes1701 Induces the Complex Response of Multiple Bioactive Secondary Metabolite Production and Relevant Gene Cluster Expression
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Epigenetic regulation plays a critical role in controlling fungal secondary metabolism. Here, we report the pleiotropic effects of the epigenetic regulator HdaA (histone deacetylase) on secondary metabolite production and the associated biosynthetic gene clusters (BGCs) expression in the plant endophytic fungus Penicillium chrysogenum Fes1701. Deletion of the hdaA gene in strain Fes1701 induced a significant change of the secondary metabolite profile with the emergence of the bioactive indole alkaloid meleagrin. Simultaneously, more meleagrin/roquefortine-related compounds and less chrysogine were synthesized in the ΔhdaA strain. Transcriptional analysis of relevant gene clusters in ΔhdaA and wild strains indicated that disruption of hdaA had different effects on the expression levels of two BGCs: the meleagrin/roquefortine BGC was upregulated, while the chrysogine BGC was downregulated. Interestingly, transcriptional analysis demonstrated that different functional genes in the same BGC had different responses to the disruption of hdaA. Thereinto, the roqO gene, which encodes a key catalyzing enzyme in meleagrin biosynthesis, showed the highest upregulation in the ΔhdaA strain (84.8-fold). To our knowledge, this is the first report of the upregulation of HdaA inactivation on meleagrin/roquefortine alkaloid production in the endophytic fungus P. chrysogenum. Our results suggest that genetic manipulation based on the epigenetic regulator HdaA is an important strategy for regulating the productions of secondary metabolites and expanding bioactive natural product resources in endophytic fungi.
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Earlier parasite arrival reduces the repeatability of host adaptive radiation
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Although parasites are known to have various effects on their hosts, we know little about their role in the assembly of diversifying host populations. Using an experimental bacterium (Pseudomonas fluorescens SBW25)-bacteriophage (ϕ2) system, we show that earlier parasite arrival significantly reduced the repeatability of host diversification. Earlier parasite arrival amplified the priority effects associated with the stochastic emergence of novel SBW25 phenotypes, translating into greater historical contingency in SBW25 diversification. Our results highlight the important role of parasite-host interactions in driving host adaptive radiation.
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Processing yield of Nile tilapia (Oreochromis niloticus): head cut types and two weight classes/ Rendimento do processamento da tilápia-do-nilo (Oreochromis niloticus): tipos de corte da cabeça em duas categorias de peso
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The aim of this study was to evaluate the best type of head cut of Nile tilapia (Oreochromis niloticus) resulting in better fillet processing yields. The experiment was carried out at the Pisciculture Station of UEM/Codapar, Maringá, Paraná, Brazil. One hundred and twenty specimens were slaughtered, head cut, eviscerated, and had their fin, skin and fillet removed. The fillet processing was undertaken by a single person. Plotting was completely randomized by a 2x3 factorial scheme. Treatments consisted of two weight categories ( W1=250-400g and W2=401-550g) and three types of head cut (C1=oblique, OB; C2=Contour, CO, and C3=strainght, ST), with 20 replicates. Each fish was considered an experimental unit. Mean values of yield were expressed in relation to fish body weight. There was an influence of head cut types and weight categories on the dressed out and fillet yield. The yields in W2 (OB=50.42%, 35.27%; CO=50.70%, 35.18% and ST=48.50%, 33.82%) were higher (p 0.05) than in W1 (OB=47.35%, 32.64%; CO=47.65%, 31.86% and ST=40.79, 27.72%) for dressed out and fillet respectively. In lower weight classes (W1), the yields of dressed out and fillet were influenced (p 0.05) by the type of head cut, where ST had lower yield compared with OB and CO. The yields of carcass without head (61.91%), ventral abdominal muscles (2.85%), deep hipaxial muscles (4.72%) in W2 were higher
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Characterization of vector communities and biting behavior in South Sulawesi with host decoy traps and human landing catches.
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BACKGROUND Indonesia has high mosquito diversity, with circulating malaria and arboviruses. Human landing catches (HLC) are ethically questionable where arboviral transmission occurs. The host decoy trap (HDT) is an exposure-free alternative outdoor sampling device. To determine HDT efficacy for local culicids, and to characterize local mosquito fauna, the trapping efficacy of the HDT was compared to that of HLCs in one peri-urban (Lakkang) and one rural (Pucak) village in Sulawesi, Indonesia. RESULTS In Lakkang the outdoor HLCs collected significantly more Anopheles per night (n = 22 ± 9) than the HDT (n = 3 ± 1), while the HDT collected a significantly greater nightly average of Culex mosquitoes (n = 110 ± 42), than the outdoor HLC (n = 15.1 ± 6.0). In Pucak, there was no significant difference in Anopheles collected between trap types; however, the HDT collected significantly more Culex mosquitoes than the outdoor HLC nightly average (n = 53 ± 11 vs 14 ± 3). Significantly higher proportions of blood-fed mosquitoes were found in outdoor HLC (n = 15 ± 2%) compared to HDT (n = 2 ± 0%). More blood-fed culicines were collected with outdoor HLC compared to the HDT, while Anopheles blood-fed proportions did not differ. For the HDT, 52.6%, 36.8% and 10.5% of identified blood meals were on cow, human, and dog, respectively. Identified blood meals for outdoor HLCs were 91.9% human, 6.3% cow, and 0.9% each dog and cat. Mosquitoes from Pucak were tested for arboviruses, with one Culex pool and one Armigeres pool positive for flavivirus, and one Anopheles pool positive for alphavirus. CONCLUSIONS The HDT collected the highest abundance of culicine specimens. Outdoor HLCs collected the highest abundance of Anopheles specimens. Although the HDT can attract a range of different Asian mosquito genera and species, it remains to be optimized for Anopheles in Asia. The high proportion of human blood meals in mosquitoes collected by outdoor HLCs raises concerns on the potential exposure risk to collectors using this methodology and highlights the importance of continuing to optimize a host-mimic trap such as the HDT.
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Biogeochemistry of macrophytes, sediments and porewaters in thermokarst lakes of permafrost peatlands, western Siberia
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The chemical composition of thermokarst lake ecosystem components is a crucial indicator of current climate change and permafrost thaw. Despite high importance of macrophytes in shallow permafrost thaw lakes for control of major and trace nutrients in lake water, the trace element (TE) partitioning between macrophytes and lake water and sediments in the permafrost regions remains virtually unknown. Here we sampled dominant macrophytes in thermokarst lakes of discontinuous and continuous permafrost zones in the Western Siberia Lowland (WSL) and measured major and trace elements in plant biomass, lake water, lake sediments and sediment porewater. All six plant species (Hippuris vulgaris L., Glyceria maxima (Hartm.) Holmb., Comarum palustre L., Ranunculus spitzbergensis Hadac, Carex aquatilis Wahlenb s. str., Menyanthes trifoliata L.) sizably accumulated macronutrients (Na, Mg, Ca), micronutrients (B, Mo, Nu, Cu, Zn, Co) and toxicants (As, Cd). Accumulation of other trace elements, including rare earth elements (REE), in macrophytes relative to pore waters and sediments was highly variable among species. Using miltiparametric statistics, we described the behavior of ТРacross two permafrost zones and identified several group of elements depending on their sources in the lake ecosystems and their affinity to sediments and macrophytes. Under future climate warming and shifting the permafrost border to the north, we anticipate an increasing uptake of heavy metals and lithogenic low mobile elements such as Ti, Al, Cr, As, Cu, Fe, Ni, Ga, Zr, and REEs by macrophytes in the discontinuous permafrost zone and Ba, Zn, Pb and Cd in the continuous permafrost zone. This may eventually diminish transport of metal micronutrients and geochemical tracers from soils to lakes and rivers and further to the Arctic Ocean.
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Impacts of nitrogen practices on yield, grain quality and nitrogen use efficiency of crops and soil fertility in three paddy-upland cropping systems.
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BACKGROUND Global food security faces a number of challenges due to increasing population, climate change and urbanization while excessive use of nitrogen fertilizers has become a major challenge for sustainable intensive agriculture. Assessing the impact of agronomic management practices on seed yield, grain quality and soil fertility is a critical step in understanding nutrient use efficiency. RESULT The comprehensive evaluation index had good fitness to that of single attribute, indicating that the comprehensive evaluation index was superior and reliable. Applying controlled release urea (rice in wheat and oilseed rape field: 150 kg N ha-1 , the other crops: 120 kg N ha-1 ) plus common urea (30 kg N ha-1 ) incorporated with straw from the previous season across the growing season for cereal and oilseed crop showed a slight improvement in seed productivity and N use efficiency among three cropping systems in the traditional evaluation method. Compared with the local farm practice (applying common urea of 150 kg N ha-1 ), applying the practices in combination based on the outcome of the comprehensive evaluation index method decreased the seed yield by -1.27~29.8%, but improved quality and soil fertility for paddy-upland cropping system, respectively. CONCLUSION Properly managing N application by applying partial and full controlled release urea with or without straw incorporation for a specific crop system has the potential to be a better compromise among yield, grain quality and soil fertility in southern China. This article is protected by copyright. All rights reserved.
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Exploring the Biochemical Origin of DNA Sequence Variation in Barley Plants Regenerated via in Vitro Anther Culture.
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Tissue culture is an essential tool for the regeneration of uniform plant material. However, tissue culture conditions can be a source of abiotic stress for plants, leading to changes in the DNA sequence and methylation patterns. Despite the growing evidence on biochemical processes affected by abiotic stresses, how these altered biochemical processes affect DNA sequence and methylation patterns remains largely unknown. In this study, the methylation-sensitive Amplified Fragment Length Polymorphism (metAFLP) approach was used to investigate de novo methylation, demethylation, and sequence variation in barley regenerants derived by anther culture. Additionally, we used Attenuated Total Reflectance Fourier Transform Infrared (ATR-FTIR) spectroscopy to identify the spectral features of regenerants, which were then analyzed by mediation analysis. The infrared spectrum ranges (710-690 and 1010-940 cm-1) identified as significant in the mediation analysis were most likely related to β-glucans, cellulose, and S-adenosyl-L-methionine (SAM). Additionally, the identified compounds participated as predictors in moderated mediation analysis, explaining the role of demethylation of CHG sites (CHG_DMV) in in vitro tissue culture-induced sequence variation, depending on the duration of tissue culture. The data demonstrate that ATR-FTIR spectroscopy is a useful tool for studying the biochemical compounds that may affect DNA methylation patterns and sequence variation, if combined with quantitative characteristics determined using metAFLP molecular markers and mediation analysis. The role of β-glucans, cellulose, and SAM in DNA methylation, and in cell wall, mitochondria, and signaling, are discussed to highlight the putative cellular mechanisms involved in sequence variation.
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The Use of a Species-Specific Health and Welfare Assessment Tool for the Giant Pacific Octopus, Enteroctopus dofleini.
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Cephalopods are increasingly viewed as sentient animals that require the same welfare consideration as their vertebrate counterparts. In this study, an observational welfare assessment tool developed by the EU Directive was revised to be species-specific for the giant Pacific octopus, Enteroctopus dofleini. This E. dofleini health and welfare assessment tool includes categories assessing E. dofleini external appearance, behavior, and clinical signs of stress and disease. These categories are scored in severity from 1 to 4, allowing a quantitative perspective on health observations. Six facilities used the health and welfare assessment tool to evaluate E. dofleini until the animal was humanely euthanized or died naturally. Results showed an irreversible upward trend in scores for feeding behavior and response to stimulus beginning 4 weeks prior to death, with significant changes in health and welfare scores between 4 weeks and the final week prior to death. This suggests that upward trends in these two variables predict death within 3-4 weeks. Highly variable results between individuals for other categories indicate that a quantitative tool can help assess health and welfare at the individual level.
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Current Consumer Perceptions of Animal Welfare across Different Farming Sectors on the Island of Ireland
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SIMPLE SUMMARY: The well-being and welfare of animals on farms is a topic of interest to many people. On the island of Ireland, this issue has received increased attention because of political and governance changes, including Brexit and COVID-19. Policy-makers and industry are considering labelling schemes to inform the food consumer about welfare standards on farms. Focus groups and an online survey were carried out with members of the public on the island of Ireland to explore their awareness, perceptions, and attitudes toward farm animal welfare standards on farms in Ireland and Northern Ireland. Most consumers believed farm animal welfare standards were high, although different farming sectors were rated differently: beef and dairy farms were viewed more positively, and pig and poultry farms were viewed less positively. The living conditions of the animal, size and intensity of the farm, national standards and schemes, and visibility all influenced perceptions of welfare standards. The public also expressed a lack of knowledge and information on the topic. In developing new policies and labelling schemes, it is important to be apprised of the current awareness, attitudes, and perceptions that the public has regarding farm animal welfare standards, as identified in the current paper. ABSTRACT: There has been increased public interest and concerns in issues such as farm animal welfare (FAW) on the island of Ireland, stoked in part by political and governance changes, such as Brexit and COVID-19. Front-of-pack food labelling represents a primary information channel for many people. In advance of considering formalised food labelling schemes, specifically relating to FAW, it is important to ensure an up-to-date understanding of current consumer perceptions of FAW. With this aim, the current study utilised a mixed methodology. Nine focus group discussions (n = 41) and an online survey (n = 972) with food consumers in Ireland and Northern Ireland explored perceptions of FAW. Results suggest that overall perceptions of FAW are high, and consumers perceive FAW to have improved in the last decade. Quantitative (ANOVA) and qualitative results show variations in perception of FAW between sectors. Results from the focus group discussions identified factors underlying consumers’ perception of FAW: the living conditions of the animal, size and intensity of the farm, national standards and schemes, and visibility. Information insufficiencies and knowledge gaps were identified. The findings are discussed in relation to policy implications for the role of public engagement, front-of-pack welfare labelling, and quality assurance schemes.
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Diversity and functional landscapes in the microbiota of animals in the wild
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Animals in the wild are able to subsist on pathogen-infected and poisonous food and show immunity to various diseases. These may be due to their microbiota, yet we have a poor understanding of animal microbial diversity and function. We used metagenomics to analyze the gut microbiota of more than 180 species in the wild, covering diverse classes, feeding behaviors, geographies, and traits. Using de novo metagenome assembly, we constructed and functionally annotated a database of more than 5000 genomes, comprising 1209 bacterial species of which 75% are unknown. The microbial composition, diversity, and functional content exhibit associations with animal taxonomy, diet, activity, social structure, and life span. We identify the gut microbiota of wild animals as a largely untapped resource for the discovery of therapeutics and biotechnology applications.
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Genotypic differences relative photochemical activity, inorganic and organic solutes and yield performance in clones of the forage cactus under semi-arid environment.
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Plants with the crassulacean acid metabolism commonly present good adaptation to arid and semi-arid environments, but it highly depends on the type of species. In this study, chlorophyll fluorescence, the concentration of inorganic and organic solutes and the productive performance were evaluated along with their relationships in different clones of the genera Opuntia and Nopalea. The experiment was conducted from 2016 to 2018. Four clones of genus Opuntia were evaluated: 'Orelha de Elefante Mexicana' (OEM), 'Orelha de Elefante Africana' (OEA), V19 and F8; and two clones of genus Nopalea: 'IPA Sertânia' and 'Miúda'. The experiment was arranged in a randomised block design, with six treatments and three replications. The following parameters were measured when harvesting: initial, maximum and variable fluorescence; the quantum yield of PSII (Fv/Fm); light-induction curves of the photochemical parameters (ΔF/Fm', qP, NPQ and ETR); the chlorophyll and carotenoid content; carbohydrates; the sodium (Na+) and potassium (K+) content; morphometry; and dry matter accumulation. The values for the effective quantum yield of PSII (ΔF/Fm') and the alterations in photochemical quenching were higher in the OEM clone (P < 0.05). There was a difference between clones for non-photochemical quenching, with the F8 clone having the highest values. The Fv/Fm was 0.87 for the OEM. 'IPA Sertânia' obtained the greatest Chl a/b, and the highest values for carbohydrate concentration were found in the OEA clone. The OEM clone showed the greatest accumulation of K+, in addition to a higher cladode area index and greater dry matter accumulation. The results of this study show the high physiological tolerance of the forage cactus to a semi-arid environment, which varies according to the clone.
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A network analysis of global cephalopod trade
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The global trade in cephalopods is a multi-billion dollar business involving the fishing and production of more than ten commercially valuable species. It also contributes, in whole or in part, to the subsistence and economic livelihoods of thousands of coastal communities around the world. The importance of cephalopods as a major cultural, social, economic, and ecological resource has been widely recognised, but research efforts to describe the extent and scope of the global cephalopod trade are limited. So far, there are no specific regulatory and monitoring systems in place to analyse the traceability of the global trade in cephalopods at the international level. To understand who are the main global players in cephalopod seafood markets, this paper provides, for the first time, a global overview of the legal trade in cephalopods. Twenty years of records compiled in the UN COMTRADE database were analysed. The database contained 115,108 records for squid and cuttlefish and 71,659 records for octopus, including commodity flows between traders (territories or countries) weighted by monetary value (USD) and volume (kg). A theoretical network analysis was used to identify the emergent properties of this large trade network by analysing centrality measures that revealed key insights into the role of traders. The results illustrate that three countries (China, Spain, and Japan) led the majority of global market movements between 2000 and 2019. Based on volume and value, as well as the number of transactions, 11 groups of traders were identified. The leading cluster consisted of only eight traders, who dominated the cephalopod market in Asia (China, India, South Korea, Thailand, and Vietnam), Europe (the Netherlands, and Spain), and the USA. This paper identifies the countries and territories that acted as major importers or exporters, the best-connected traders, the hubs or accumulators, the modulators, the main flow routes, and the weak points of the global cephalopod trade network over the last 20 years. This knowledge of the network is crucial to move towards an environmentally sustainable, transparent, and food-secure global cephalopod trade.
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Climatic niche comparison of raccoons Procyon lotor and raccoon dogs Nyctereutes procyonoides in their native and non-native ranges
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During the last century, the practice of fur farming in Europe led to the introduction of two mammal species from opposite ends of the world With their subsequent unintentional escape from captivity or intentional releases, the process of slow expansion and establishment in Europe began The raccoon Procyon lotor and the raccoon dog Nyctereutes procyonoides are included on the European Union’s list of invasive alien species We characterised the current climatic niches of the two species in their native ranges in North America and Asia, and compared them with their non-native-range niches in Europe, where we also projected climatic suitability The aim was to locate suitable habitats beyond their current ranges and assess where a range expansion can be expected Niche comparison and the projection of climatic suitability in Europe were based on eight bioclimatic variables and presence records from the Global Biodiversity Information Facility database For niche modelling, we applied the maximum entropy approach (Maxent) and used the native-range data for training Minimum temperature of the coldest month (bio06) was identified as the most important bioclimatic variable in the habitat suitability models for both species Different tolerance levels regarding this variable might explain small differences between the species’ projected ranges, especially in the north and east of Europe The high niche unfilling for both species in Europe suggests a potential for expansion beyond their present ranges With only little understanding of their ecological impacts in their new ranges, including the potential risk of Nyctereutes procyonoides as SARS-CoV-2 reservoir hosts, further research and management is required at various spatial scales in Europe © 2021 The Authors Mammal Review published by Mammal Society and John Wiley & Sons Ltd
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Hyperspectral Reflectance of Light-Adapted Leaves Can Predict Both Dark- and Light-Adapted Chl Fluorescence Parameters, and the Effects of Chronic Ozone Exposure on Date Palm (Phoenix dactylifera)
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High-throughput and large-scale measurements of chlorophyll a fluorescence (ChlF) are of great interest to investigate the photosynthetic performance of plants in the field. Here, we tested the capability to rapidly, precisely, and simultaneously estimate the number of pulse-amplitude-modulation ChlF parameters commonly calculated from both dark- and light-adapted leaves (an operation which usually takes tens of minutes) from the reflectance of hyperspectral data collected on light-adapted leaves of date palm seedlings chronically exposed in a FACE facility to three ozone (O3) concentrations (ambient air, AA; target 1.5 × AA O3, named as moderate O3, MO; target 2 × AA O3, named as elevated O3, EO) for 75 consecutive days. Leaf spectral measurements were paired with reference measurements of ChlF, and predictive spectral models were constructed using partial least squares regression. Most of the ChlF parameters were well predicted by spectroscopic models (average model goodness-of-fit for validation, R2: 0.53-0.82). Furthermore, comparing the full-range spectral profiles (i.e., 400-2400 nm), it was possible to distinguish with high accuracy (81% of success) plants exposed to the different O3 concentrations, especially those exposed to EO from those exposed to MO and AA. This was possible even in the absence of visible foliar injury and using a moderately O3-susceptible species like the date palm. The latter view is confirmed by the few variations of the ChlF parameters, that occurred only under EO. The results of the current study could be applied in several scientific fields, such as precision agriculture and plant phenotyping.
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Data proliferation, reconciliation, and synthesis in viral ecology
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The fields of viral ecology and evolution have rapidly expanded in the last two decades, driven by technological improvements, and motivated by efforts to discover potentially zoonotic wildlife viruses under the rubric of pandemic prevention. One consequence has been a massive proliferation of host-virus association data, which comprise the backbone of research in viral macroecology and zoonotic risk prediction. These data remain fragmented across numerous data portals and projects, each with their own scope, structure, and reporting standards. Here, we propose that synthesis of host-virus association data is a central challenge to improve our understanding of the global virome and develop foundational theory in viral ecology. To illustrate this, we build an open reconciled mammal-virus database from four key published datasets, applying a standardized taxonomy and metadata. We show that reconciling these datasets provides a substantially richer view of the mammal virome than that offered by any one individual database. We argue for a shift in best practice towards the incremental development and use of synthetic datasets in viral ecology research, both to improve comparability and replicability across studies, and to facilitate future efforts to use machine learning to predict the structure and dynamics of the global virome.
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Levantamento De Espécies De Anastrepha (diptera: Tephritidae) Em Áreas De Cucurbitáceas Sob Sistema De Mitigação De Risco
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ABSTRACT The present work was conducted from February to November 2008 into Cucurbitaceae areas under Pest Mitigation Risk System for Anastrepha grandis Macquart in Regente Feijó, State of São Paulo, Brazil, in order to monitoring and identifying the fruit fly species captured in McPhail traps, in Cucurbitaceae areas to exportation. A total of 48 specimens of Anastrepha were captured, being 32 males (66.7%) and 16 females (33.3%). We captured Anastrepha obliqua (Macquart), A. pickeli Lima, A. montei Lima, .A. fraterculus (Wied.) and Anastrepha sp. The most frequent species were A. pickeli (15.4%) and A. fraterculus (10.26%). Anastrepha pickeli was the most predominant and frequent. A. grandis was not captured, that indicate conditions to reaching area of low prevalence status.
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Superinfection reconciles host–parasite association and cross-species transmission
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Parasites are either dedicated to a narrow host range, or capable of exploiting a wide host range. Understanding how host ranges are determined is very important for public health, as well as wildlife, plant, livestock and agricultural diseases. Our current understanding of host–parasite associations hinges on co-evolution, which assumes evolved host preferences (host specialization) of the parasite. Despite the explanatory power of this framework, we have only a vague understanding of why many parasites routinely cross the host species’ barrier. Here we introduce a simple model demonstrating how superinfection (in a heterogeneous community) can promote host–parasite association. Strikingly, the model illustrates that strong host–parasite association occurs in the absence of host specialization, while still permitting cross-species transmission. For decades, host specialization has been foundational in explaining the maintenance of distinct parasites/strains in host species. We argue that host specializations may be exaggerated, and can occur as a byproduct (not necessarily the cause) of host–parasite associations.
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Molecular Liver Fingerprint Reflects the Seasonal Physiology of the Grey Mouse Lemur (Microcebus murinus) during Winter
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Grey mouse lemurs (Microcebus murinus) are primates that respond to environmental energetic constraints through strong physiological seasonality. They notably fatten during early winter (EW), and mobilize their lipid reserves while developing glucose intolerance during late winter (LW), when food availability is low. To decipher how the hepatic mechanisms may support such metabolic flexibility, we analyzed the liver proteome of adult captive male mouse lemurs, whose seasonal regulations are comparable to their wild counterparts. We highlight profound hepatic changes that reflect fat accretion in EW at the whole-body level, without triggering an ectopic storage of fat in the liver, however. Moreover, molecular regulations are consistent with the decrease in liver glucose utilization in LW, and therefore with reduced tolerance to glucose. However, no major regulation was seen in insulin signaling/resistance pathways. Fat mobilization in LW appeared possibly linked to the reactivation of the reproductive system while enhanced liver detoxification may reflect an anticipation to return to summer levels of food intake. Overall, these results show that the physiology of mouse lemurs during winter relies on solid molecular foundations in liver processes to adapt fuel partitioning while opposing the development of a pathological state despite large lipid fluxes.
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Agricultural intensification leads to higher nitrate levels in Lake Ontario tributaries
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Eutrophication remains the most widespread water quality impairment globally and is commonly associated with excess nitrogen (N) and phosphorus (P) inputs to surface waters from agricultural runoff. In southern Ontario, Canada, increases in nitrate (NO3-N) concentrations as well as declines in total phosphorus (TP) concentration have been observed over the past four decades at predominantly agricultural watersheds, where major expansions in row crop production at the expense of pasture and forage have occurred. This study used a space-for-time approach to test whether 'agricultural intensification', herein defined as increases in row crop area (primarily corn-soybean-winter wheat rotation) at the expense of mixed livestock and forage/pasture, could explain increases in NO3-N and declines in TP over time. We found a clear, positive relationship between the extent of row crop area within watersheds and NO3-N losses, such that tributary NO3-N concentrations and export were predicted to increase by ~0.4â¯mg/L andâ¯~â¯130â¯kg/km2 respectively, for every 10% expansion in row crop area. There was also a significant positive relationship between row crop area and total dissolved phosphorus (TDP) concentration, but not export, and TP was not correlated with any form of landcover. Instead, TP was strongly associated with storm events, and was more sensitive to hydrologic condition than to landcover. These results suggest that pervasive shifts toward tile-drained corn and soybean production could explain increases in tributary NO3-N levels in this region. The relationship between changes in agriculture and P is less clear, but the significant association between dissolved P and row crop area suggests that increased adoption of reduced tillage practices and tile drainage may enhance subsurface losses of P.
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Genetic profiles of three cinchona species in junghuhn natural reserve, Indonesia
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Cinchona species were widely used as ancient medicines for different diseases because they contain the active component quinine and its derivatives. However, studies on the molecular aspects of cinchona, including its genetic diversity, have not been reported because most previous works focused on the administration of the antimalarial cinchona alkaloid. Quinine is also being tested as alternative compound for the treatment of Covid-19. The Junghuhn Natural Reserve in Indonesia contains three different types of cinchona plants, namely, Cinchona calisaya, Cinchona pubescens, and Cinchona sp. Given that the genetic diversity and kinship of these species have never been studied, collecting data on the cinchona gene pool has become imperative. This study analyzed the genetic diversity of the cinchona species in the Junghuhn Natural Reserve, Indonesia, by using eight RAPD markers, i.e., OPA-2, OPA-9, OPB-02, OPB-03, OPB-04, OPB-05, OPB-7, and OPJ-07, during 2020 at the University of Jenderal Soedirman, Purwokerto-Indonesia. Polymorphic band data were obtained. Then, phenogram analysis was conducted by using UPGMA and maximum parsimony with MEGA7. The RAPD profiles of Cinchona species (C. calisaya, C. pubescent, and Cinchona sp.) revealed polymorphism with different markers, i.e., OPA-2 (90%), OPB-2 (75%), OPB-5 (75%), OPB-3 (66.66%), OPB-4 (66.66%), OPB-7 (66.66%), OPJ-7 (66.66%), and OPA-9 (58.33%) sequentially with total polymorphism (70.62%). C. calisaya was identified as the most distinctive species. UPGMA yielded a coefficient of 0.200 and two distinctive groups: Group I, which comprised C. pubescens and Cinchona sp. with the p-distance value of 0.333, and Group II, which contained C. calisaya. Ixora sp. was treated as an outgroup plant. The topology of the dendrogram was consistent with that of the UPGMA dendrogram. Results may be used for the further exploration of the genetic diversity of cinchona species. © Society for the Advancement of Breeding Research in Asia and Oceania (SABRAO) 2021.
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Effects of varying group sizes on performance, body defects, and productivity in broiler chickens
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This study aimed to determine the changes in the performance, welfare, and productivity level of broiler chickens reared at various group sizes (GS3000, GS4000, GS6000, and GS20â¯000) under intensive field conditions. The study was carried out according to a randomized block design with four different group sizes (GS) in three trials. Weekly body weights (BWs) were determined randomly in 150 individuals from each GS group. Feed intake (FI), feed conversion ratio (FCR), and European production efficiency factor (EPEF) were determined for each GS treatment. Body defects (footpad dermatitis, FPD, hock burn, HB, and the breast burn, BB) were measured randomly in 150 chickens (75 male and 75 female) from each group using a visual scoring system with a 0-3 scale. At 1 and 2 weeks of age, GS3000 broilers had similar BW to GS6000 and higher than GS4000 and GS20â¯000. However, this situation changed at 6 weeks of age and the male chickens in GS6000 became heavier than in GS3000, GS4000 and GS20â¯000 ( P ⯠= â¯0.007). No differences in mean values of temperature, humidity, air velocity and litter moisture levels were observed among GS treatments. GS3000 and GS4000 chickens had significantly lower levels of FPD, HB, and BB than chickens reared in GS6000 and GS20â¯000 ( P ⯠< â¯0.001). The EPEF values from highest to lowest were 425.8, 404.5, 358.8, and 354.0 in the GS6000 GS3000, GS4000, and GS20â¯000 groups, respectively. In conclusion, our study results showed that rearing in groups of 6000 broilers had both better performance and higher overall productivity than other groups but tended to show more severe body defects.
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Habitat distribution change of commercial species in the Adriatic Sea during the COVID-19 pandemic
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The COVID-19 pandemic has led to reduced anthropogenic pressure on ecosystems in several world areas, but resulting ecosystem responses in these areas have not been investigated. This paper presents an approach to make quick assessments of potential habitat changes in 2020 of eight marine species of commercial importance in the Adriatic Sea. Measurements from floating probes are interpolated through an advection-equation based model. The resulting distributions are then combined with species observations through an ecological niche model to estimate habitat distributions in the past years (2015–2018) at 0.1° spatial resolution. Habitat patterns over 2019 and 2020 are then extracted and explained in terms of specific environmental parameter changes. These changes are finally assessed for their potential dependency on climate change patterns and anthropogenic pressure change due to the pandemic. Our results demonstrate that the combined effect of climate change and the pandemic could have heterogeneous effects on habitat distributions: three species (Squilla mantis, Engraulis encrasicolus, and Solea solea) did not show significant niche distribution change; habitat suitability positively changed for Sepia officinalis, but negatively for Parapenaeus longirostris, due to increased temperature and decreasing dissolved oxygen (in the Adriatic) generally correlated with climate change; the combination of these trends with an average decrease in chlorophyll, probably due to the pandemic, extended the habitat distributions of Merluccius merluccius and Mullus barbatus but reduced Sardina pilchardus distribution. Although our results are based on approximated data and reliable at a macroscopic level, we present a very early insight of modifications that will possibly be observed years after the end of the pandemic when complete data will be available. Our approach is entirely based on Findable, Accessible, Interoperable, and Reusable (FAIR) data and is general enough to be used for other species and areas.
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The Sensory Profiles of Flatbreads Made from Sorghum, Cassava, and Cowpea Flour Used as Wheat Flour Alternatives
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Sorghum, cowpea, and cassava are underutilised gluten-free sources of flour that have the potential to be used in bread products in sub-Saharan Africa. Excessive wheat imports affect the economies of countries in sub-Saharan Africa, driving the search for wheat flour alternatives. To extend the use of sorghum, cowpea, and cassava flours toward bread production, it is vital that the sensory properties of these flours are better understood. A trained sensory panel evaluated and described the sensory properties of flatbread models prepared from red non-tannin sorghum, fractions (whole and dehulled) of two cowpea varieties, cassava starch, and designated flour composites. The composites were prepared using cassava starch and sorghum flour at 0%, 35%, and 70%, respectively, with 30% cowpea flour. The addition of sorghum intensified sorghum aroma in flatbread, while cowpea flours contributed a beany flavour. Flatbreads from cassava-cowpea composites had a chewier and rubberier mouthfeel, an intense fermented aroma and flavour, and a sour aftertaste compared to single flours, but were most similar to the wheat flatbread, with a residual beany flavour. Information from this study can guide food product developers toward developing new bread products from sorghum, cassava, and cowpea composite flours, thereby moving Africa towards a more sustainable food system. Further research on the effects of the sensory characteristics on consumer liking of the flatbreads is needed.
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The efficient use of radiation, water, and nitrogen uptake by low-nitrogen-tolerant broomcorn millet (Panicum miliaceum L.) increased grain yield in the Loess Plateau, China
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• Low N input decreased broomcorn millet grain yield by poor resource use efficiency. • Low-N-tolerant cultivars performed better than low-N-sensitive cultivars at low N. • Low-N-tolerant cultivars had increased photosynthesis and dry matter transport. • Low-N-tolerant cultivars had high productivity under field conditions. The development of highly productive, low-N-tolerant cultivars is important to facilitate green and sustainable agriculture. However, it is unclear how low-N-tolerant cultivars achieve high grain yields under field conditions. In this study, the physiology facilitating the strong growth and efficient resource use of four low-N-tolerant Panicum miliaceum L. cultivars was compared with two low-N-sensitive cultivars using low and typical N fertilization applications (0, 75, and 150 kg N ha−1) on the semiarid Loess Plateau, China in 2019 and 2020. Compared to normal N fertilization, low N fertilization treatments significantly decreased plant photosynthetic capacity by regulating leaf stomatal closing, resulting in reduced dry matter accumulation and transportation, growth inhibition, weakened resource utilization, and consequently, a 28.9% decrease in grain yield. Compared to the low-N-sensitive cultivars, the low-N-tolerant cultivars had improved growth, leaf photosynthetic capacity, and dry matter transportation. These improved physiological characteristics resulted in more effective resource capture in the low-N-tolerant cultivars. This included higher and more efficient radiation use (24.4% and 26.9%), water use (63.5% and 48.2%), and N uptake (37.0% and 33.7%) in 2019 and 2020, respectively. Furthermore, the low-N-tolerant cultivars had increased productivity, with higher grain yields (38.6-41.6%) and harvest index values (16.7-28.2%) under low N conditions in the two years of the study. Overall, the results of this study determined the effect of low N input on broomcorn millet productivity and illustrated the strategies by which low-N-tolerant cultivars increased grain yield in semiarid field conditions. [Display omitted] [ABSTRACT FROM AUTHOR] Copyright of Agricultural & Forest Meteorology is the property of Elsevier B.V. and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
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Taming wildlife disease: bridging the gap between science and management
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1. Parasites and pathogens of wildlife can threaten biodiversity, infect humans and domestic animals, and cause significant economic losses, providing incentives to manage wildlife diseases. Recent insights from disease ecology have helped transform our understanding of infectious disease dynamics and yielded new strategies to better manage wildlife diseases. Simultaneously, wildlife disease management (WDM) presents opportunities for large‐scale empirical tests of disease ecology theory in diverse natural systems. 2. To assess whether the potential complementarity between WDM and disease ecology theory has been realized, we evaluate the extent to which specific concepts in disease ecology theory have been explicitly applied in peer‐reviewed WDM literature. 3. While only half of WDM articles published in the past decade incorporated disease ecology theory, theory has been incorporated with increasing frequency over the past 40 years. Contrary to expectations, articles authored by academics were no more likely to apply disease ecology theory, but articles that explain unsuccessful management often do so in terms of theory. 4. Some theoretical concepts such as density‐dependent transmission have been commonly applied, whereas emerging concepts such as pathogen evolutionary responses to management, biodiversity–disease relationships and within‐host parasite interactions have not yet been fully integrated as management considerations. 5. Synthesis and applications. Theory‐based disease management can meet the needs of both academics and managers by testing disease ecology theory and improving disease interventions. Theoretical concepts that have received limited attention to date in wildlife disease management could provide a basis for improving management and advancing disease ecology in the future.
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An economic evaluation of the Whole Genome Sequencing source tracking program in the U.S.
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The U.S. Food and Drug Administration (FDA) created the GenomeTrakr Whole Genome Sequencing (WGS) Network in 2013, as a tool to improve food safety. This study presents an analysis of Whole Genome source tracking implementation on potential food contamination and related illnesses through theoretical, empirical, and cost benefit analyses. We conduct empirical tests using data from FDA regulated food commodity outbreaks garnering FDA response from 1999 through 2019 and examine the effect of the National Center for Biotechnology Information (NCBI) Pathogen detection program of source tracking WGS isolates collected in the U.S. on outbreak illnesses for three pilot pathogens (E. coli, Listeria, and Salmonella). Empirical results are consistent with the theoretical model and suggest that each additional 1,000 WGS isolates added to the public NCBI database is associated with a reduction of approximately 6 illnesses per WGS pathogen, per year. Empirical results are connected to existing literature for a Monte Carlo analysis to estimate benefits and costs. By 2019, annual health benefits are estimated at nearly $500 million, compared to an approximately $22 million investment by public health agencies. Even under conservative assumptions, the program likely broke even in its second year of implementation and could produce increasing public health benefits as the GenomeTrakr network matures.
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Contributions to the systematic of Pimelodidae (Osteichthyes, Siluriformes): basic and molecular cytogenetics on seven species of Pimelodus from three Brazilian hydrographic systems
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Pimelodidae harbors several species and is widely distributed throughout the Neotropical region. Pimelodus is the genus with the largest number of species, however it is a polyphyletic group. Cytogenetic analyzes of the valid species still covers less than half of them. Herein, seven Pimelodus species from three Brazilian hydrographic systems were analyzed through basic (Giemsa, AgNORs and C banding) and molecular (5S and 18S rDNA-FISH) cytogenetic methods. All species had 2n=56 chromosomes with different karyotype formulas observed among the species. AgNORs were corresponding to 18S rDNA and localized on long arm of one chromosome pair in all species. Heterochromatin distribution follows the pattern commonly verified in the family and allows to identify each one of the studied species. 5S rDNA marker was interspecifically variable in number and position of cistrons. Pimelodus ortmanni had B chromosomes varying intra and inter-individually. We performed a discussion on our own and available cytogenetic data for Pimelodidae, and the associating of them with available phylogeny enable us identifying features that distinguish subgroups within Pimelodidae, such as NORs location (terminal/long arm for species belonging to "Iheringichthys-Parapimelodus" and "Pimelodus maculatus" subclades) and location of 5S rDNA sites (pericentromeric/interstitial/ long arm for species belonging to Pimelodus group).(AU)
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Nondestructive Sampling for Spotted Lanternfly (Hemiptera: Fulgoridae) Egg Masses in Woodlands Based on Fixed-Radius Plots.
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A nondestructive sampling method was developed for Lycorma delicatula egg masses based on fixed-radius plot (100 m2) in 2020. All trees >1.0 cm DBH (diameter at breast height, 1.37 m in height) on each plot were visually inspected from the ground 4 m from the tree with binoculars. Egg masses found on trees were separated into six within-tree positions (lower trunk, middle trunk, upper trunk, first branch, second branch, above second branch) and recorded by cardinal directions, whereas those laid on shrubs/vines and stones were recorded without such separation. In total, 146 trees were inventoried at 28 plots over seven study sites (four plots per site). Egg masses were found on 19 tree species plus summer grape (Vitis aestivalis) and stone. Of the 421 total egg masses recorded, 31.1% were on Norway maple (Acer platanoides), followed by tree-of-heaven (Ailanthus altissima; 14.7%), black birch (Betula lenta; 12.6%), tuliptree (Liriodendron tulipifera; 11.9%), and American beech (Fagus grandifolia; 10.2%). Egg mass density per tree was positively correlated with tree diameter, and egg mass density per plot was positively correlated with plot basal area. Egg mass density after conversion ranged from 600 to 3,930 eggs masses/ha with no significant difference among study sites. Cardinal direction had no effect; however, significantly more egg masses were found on the first branches and upper trunks than other within-tree positions. Overall, branches were better than trunks in predicting egg mass number for the tree. The role of distance and late season adult aggregation on oviposition substrate selection are discussed.
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Accelerating flash droughts induced by the joint influence of soil moisture depletion and atmospheric aridity.
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The emergence of flash drought has attracted widespread attention due to its rapid onset. However, little is known about the recent evolution of flash droughts in terms of the speed of onset and the causes of such a rapid onset phase of flash droughts. Here, we present a comprehensive assessment of the onset development of flash droughts and the underlying mechanisms on a global scale. We find that 33.64-46.18% of flash droughts with 5-day onset of drying, and there is a significant increasing trend in the proportion of flash droughts with the 1-pentad onset time globally during the period 2000-2020. Flash droughts do not appear to be occurring more frequently in most global regions, just coming on faster. In addition, atmospheric aridity is likely to create a flash drought-prone environment, and the joint influence of soil moisture depletion and atmospheric aridity further accelerates the rapid onset of flash droughts.
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Limited effects of traffic noise on behavioural responses to conspecific mating calls in the eastern sedge frog Litoria fallax
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Anthropogenic noise is a pervasive environmental feature across both urban and non-urban habitats and presents a novel challenge especially for acoustically communicating species. While it is known that some species adjust acoustic signals to communicate more effectively in noisy habitats, we know very little about how the receivers of these signals might be impacted by anthropogenic noise. Here, we investigated female and male Litoria fallax frogs’ ability to distinguish between high- and low-quality acoustic signals during the presence of background traffic noise and without. We performed a controlled behavioural experiment whereby frogs were presented with simultaneously broadcasted attractive and unattractive calls from opposing directions, once with background traffic noise and once without. We found that females in particular chose the unattractive call significantly more often (and males significantly less often) when noise was being broadcast. This indicates that anthropogenic noise potentially affects receiver responses to acoustic signals, even when calls are not acoustically masked, with potential consequences for maladaptive mating behaviours and population outcomes. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s10211-021-00378-7.
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Bee Products: A Representation of Biodiversity, Sustainability, and Health
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Biodiversity strengthens the productivity of any ecosystem (agricultural land, forest, lake, etc.). The loss of biodiversity contributes to food and energy insecurity; increases vulnerability to natural disasters, such as floods or tropical storms; and decreases the quality of both life and health. Wild and managed bees play a key role in maintaining the biodiversity and in the recovery and restoration of degraded habitats. The novelty character of this perspective is to give an updated representation of bee products’ biodiversity, sustainability, and health relationship. The role of bees as bioindicators, their importance in the conservation of biodiversity, their ecosystem services, and the variety of the bee products are described herein. An overview of the main components of bee products, their biological potentials, and health is highlighted and detailed as follows: (i) nutritional value of bee products, (ii) bioactive profile of bee products and the related beneficial properties; (iii) focus on honey and health through a literature quantitative analysis, and (iv) bee products explored through databases. Moreover, as an example of the interconnection between health, biodiversity, and sustainability, a case study, namely the “Cellulose Park”, realized in Rome (Italy), is presented here. This case study highlights how bee activities can be used to assess and track changes in the quality of agricultural ecosystems—hive products could be valid indicators of the quality and health of the surrounding environment, as well as the changes induced by the biotic and abiotic factors that impact the sustainability of agricultural production and biodiversity conservation in peri-urban areas.
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Determination of field capacity in the Chibunga and Guano rivers micro-basins
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Background: The micro-basins of the Chibunga and Guano rivers are located within the sub-basin of the Chambo River, which starts at the thaw of the Chimborazo, crosses the cities of Guano and Riobamba, and ends in the Chambo River. These rivers are considered fluvial hydrological forces and geological limits of the aquifer, located in this sub-basin. For this reason, our investigation addressed the field capacity in the micro-basins of Chibunga and Guano rivers, to determine the maximum retention potential, i.e., the saturation of water in the soil. Methods: We investigated the change of precipitation to runoff through the correlations between the characteristics of the soil and its vegetation. We applied the Curve Number (CN) method introduced by the United States Soil Conservation Service (USSCS); this represents an empirical model, which relates the vegetation cover to the geological and topographic conditions of the soil. Along with the geographic information system, the model allows to represent the variation of runoffs for each micro-basin, according to the different land use categories, over the time frame from 2010 to 2014. Results: We found that the maximum retention potential is directly affected by CN values, representing the runoff potential. Highest values of 100 belong to the wetlands, urban area, snow, and water, as rain is converted directly into runoff, being impervious areas. The Guano river micro-basin possesses clay soil with CN of 78, the soil texture for eucalyptus forest is clay loam, and its CN value, 46, is the lowest of the data set. Knowledge of field capacity allows to properly evaluate the storage capacity of soil and water conservation. Conclusions: Results of this work will be useful in the quantification of the water balance, to determine the water supply and demand.
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Understanding non-compliance in small-scale fisheries: Shark fishing in Myanmar's Myeik Archipelago.
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Achieving fisheries compliance is challenging in contexts where enforcement capacity is limited and the incentives for rule-breaking are strong. This challenge is exemplified in Myanmar, where an active shark fishery exists despite a nationwide ban on targeted shark fishing. We used the Kipling method (5W1H) to gather a complete story of non-compliance in five small-scale fishing communities in the Myeik Archipelago. Among 144 fishers surveyed, 49% were aware of the nationwide ban. Shark fishers (24%) tended to be younger individuals who did not own a boat and perceived shark fishing to be prevalent. Compliant fishers were motivated by a fear of sharks and lack of capacity (equipment, knowledge), whereas food and income were cited as key motivations for non-compliance. The results of our study emphasize that in resource-dependent communities, improving compliance for effective shark conservation may require addressing broader issues of poverty, food security and the lack of alternatives.
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Erratum: Comparative Transcriptome Analysis of Gayal (Bos frontalis), Yak (Bos grunniens), and Cattle (Bos taurus) Reveal the High-Altitude Adaptation
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[This corrects the article DOI: 10.3389/fgene.2021.778788.].
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Tryptophan regulates Drosophila zinc stores
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Zinc deficiency is commonly attributed to inadequate absorption of the metal. Instead, we show that body zinc stores in Drosophila melanogaster depend on tryptophan consumption. Hence, a dietary amino acid regulates zinc status of the whole insecta finding consistent with the widespread requirement of zinc as a protein cofactor. Specifically, the tryptophan metabolite kynurenine is released from insect fat bodies and induces the formation of zinc storage granules in Malpighian tubules, where 3-hydroxykynurenine and xanthurenic acid act as endogenous zinc chelators. Kynurenine functions as a peripheral zinc-regulating hormone and is converted into a 3-hydroxykynureninezincchloride complex, precipitating within the storage granules. Thus, zinc and the kynurenine pathwaywell-known modulators of immunity, blood pressure, aging, and neurodegenerationare physiologically connected.
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Thermal favorability for the Oidium caricae and Asperisporium caricae in areas of edaphoclimatic aptitude for the Carica papaya.
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Objective this study aimed to determine the thermal favorability for the oidium (Oidium caricae) and early blight (Asperisporium caricae) in areas of edaphoclimatic aptitude for the papaya (Carica papaya) in the Espírito Santo state, Brazil. The edaphoclimatic zoning was based on the overlapping of maps that characterize the average annual air temperature obtained by multiple linear regression, annual water deficiency calculated by the Thornthwaite and Matter method (1955) and favorable soil classes to the development of papaya. The results indicated that as regards the edaphoclimatic zoning for the papaya crop it was observed that 71.70% of the area is classified as apt for its development. In relation to agrometeorological favorability for the occurrence of fungal diseases, there was a favorability of 7.64% for the development without restrictions of the oidium and a predominance of 64,56% of favorability with thermal restriction. For the early blight fungus, it was observed that the zones of favorability without restriction correspond to 11.66% of the area apt for the papaya cultivation and that 55.13% of the area has favorability with restriction of humidity. The edaphoclimatic zoning for the papaya crop showed compatibility with the most productive areas of this crop in the state of Espírito Santo. The zoning of thermal favorability for the occurrence of papaya fungal diseases proved to be a valuable tool for studies of plant diseases, allowing the establishment of plans for the allocation of resistant varieties, in order to minimize the risks of loss of crop productivity due to the disease. This methodology presents potential to be used in other areas, cultures and phytopathological diseases.
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Assessment and modeling of maize evapotranspiration and yield with plastic and biodegradable film mulch
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• In wet year, the ET under no film mulching was lower than film mulching, but was higher in dry year. • A slight T difference under BFM and PFM occurred in the late crop growth stages. • Max E difference at B station and J station happen in early and late growth stages, respectively. • Water use efficiency and irrigation use efficiency under PFM and BFM were improved. Biodegradable film mulching (BFM) in various crops is a good alternative to plastic film mulching (PFM). However, the difference in field water consumption between BFM and PFM has not been fully investigated. A four-year experiment with an improved evapotranspiration (ET) model (BSW) was performed to systematically evaluate and compare the effects of BFM, PFM, and no film mulching (NFM) on ET dynamics. The experiments were done in the Hetao Irrigation District of China at the Baleng experimental station (B station) with sandy soil in 2016-2017 and the Jiuzhuang experimental station (J station) with sandy loam soil in 2018-2019. The results of multi-year verification illustrated that the model accuracy was well-supported during 2016-2019 with mean absolute error (MAE) of 9.0%-16.9% and 13.1%-19.1% for ET and evaporation (E), respectively. The average cumulative ET (CET) under FM (i.e., BFM and PFM) was 443.5 mm each year and decreased by 13.4% compared to NFM. However, there was an obvious difference in CET during the different hydrological years, especially in the early crop growth stages. In the wet years (2016 and 2018), the average CET under FM increased by 6.2%-7.0% compared to NFM but decreased by 7.1%-11.8% in the dry years (2017 and 2019). The transpiration (T) difference between FM and NFM primarily appeared in the early crop growth stages, and T / ET under FM was significantly higher than with NFM by 46.9%-50.2%. An obvious E difference between BFM and PFM was observed in the later crop growing stages due to a greater area of the disintegrated biodegradable film. Additionally, crop yield under PFM and BFM increased by 35.4% and 28.3% compared with NFM, respectively, and water use efficiency (WUE) increased by 47.1% and 35.8%, respectively. Thus, biodegradable film is recommended to replace plastic film to effectively promote the development of sustainable agriculture. [ABSTRACT FROM AUTHOR] Copyright of Agricultural & Forest Meteorology is the property of Elsevier B.V. and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
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Melatonin influences the early growth stage in Zoysia japonica Steud. by regulating plant oxidation and genes of hormones
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Zoysia japonica is a commonly used turfgrass species around the world. Seed germination is a crucial stage in the plant life cycle and is particularly important for turf establishment and management. Experiments have confirmed that melatonin can be a potential regulator signal in seeds. To determine the effect of exogenous melatonin administration and explore the its potential in regulating seed growth, we studied the concentrations of several hormones and performed a transcriptome analysis of zoysia seeds after the application of melatonin. The total antioxidant capacity determination results showed that melatonin treatment could significantly improve the antioxidant capacity of zoysia seeds. The transcriptome analysis indicated that several of the regulatory pathways were involved in antioxidant activity and hormone activity. The hormones concentrations determination results showed that melatonin treatment contributed to decreased levels of cytokinin, abscisic acid and gibberellin in seeds, but had no significant effect on the secretion of auxin in early stages. Melatonin is able to affect the expression of IAA (indoleacetic acid) response genes. In addition, melatonin influences the other hormones by its synergy with other hormones. Transcriptome research in zoysia is helpful for understanding the regulation of melatonin and mechanisms underlying melatonin-mediated developmental processes in zoysia seeds.
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Pronounced Seasonal Changes in the Movement Ecology of a Highly Gregarious Central-Place Forager, the African Straw-Coloured Fruit Bat (Eidolon helvum)
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BACKGROUND: Straw-coloured fruit bats (Eidolon helvum) migrate over vast distances across the African continent, probably following seasonal bursts of resource availability. This causes enormous fluctuations in population size, which in turn may influence the bats’ impact on local ecosystems. We studied the movement ecology of this central-place forager with state-of-the-art GPS/acceleration loggers and concurrently monitored the seasonal fluctuation of the colony in Accra, Ghana. Habitat use on the landscape scale was assessed with remote sensing data as well as ground-truthing of foraging areas. PRINCIPAL FINDINGS: During the wet season population low (~ 4000 individuals), bats foraged locally (3.5–36.7 km) in urban areas with low tree cover. Major food sources during this period were fruits of introduced trees. Foraging distances almost tripled (24.1–87.9 km) during the dry season population peak (~ 150,000 individuals), but this was not compensated for by reduced resting periods. Dry season foraging areas were random with regard to urban footprint and tree cover, and food consisted almost exclusively of nectar and pollen of native trees. CONCLUSIONS AND SIGNIFICANCE: Our study suggests that straw-coloured fruit bats disperse seeds in the range of hundreds of meters up to dozens of kilometres, and pollinate trees for up to 88 km. Straw-coloured fruit bats forage over much larger distances compared to most other Old World fruit bats, thus providing vital ecosystem services across extensive landscapes. We recommend increased efforts aimed at maintaining E. helvum populations throughout Africa since their keystone role in various ecosystems is likely to increase due to the escalating loss of other seed dispersers as well as continued urbanization and habitat fragmentation.
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Quantifying poor working equid welfare in Nepalese brick kilns using a welfare assessment tool
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BACKGROUND: Across Asia the brick-kiln industry is expanding. In Nepal, urban dwelling has increased in recent years, raising requirement for low-cost, mass produced bricks to meet the population needs. Working equids (WEs) play a key role in non-mechanised kilns. Assessing the welfare of these equids is the starting point to addressing concerns. In line with One Welfare principles, the health and welfare of animals, people and the kiln environment are interlinked. MATERIALS AND METHODS: In December 2019, 119 WEs were assessed in seven brick kilns in three districts of Nepal, using the Equid Assessment Research and Scoping tool, developed by The Donkey Sanctuary. The objective was to measure welfare at the start of the brick kiln season. RESULTS: Horses were the predominant species of WE. Hazardous housing and environments were seen in all kilns. Behaviour responses were mixed. Owner responses and animal examination indicated poor working conditions. Signs of harmful practice were evident in most animals. The majority were underweight, with poor general health, skin alterations and musculoskeletal issues. CONCLUSION: The welfare of equids prior to starting brick kiln work is poor, posing significant concerns for the actual working period. Intervention to enhance health and welfare is required.
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Global trends in mangrove forest fragmentation
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Fragmentation is a major driver of ecosystem degradation, reducing the capacity of habitats to provide many important ecosystem services. Mangrove ecosystem services, such as erosion prevention, shoreline protection and mitigation of climate change (through carbon sequestration), depend on the size and arrangement of forest patches, but we know little about broad-scale patterns of mangrove forest fragmentation. Here we conduct a multi-scale analysis using global estimates of mangrove density and regional drivers of mangrove deforestation to map relationships between habitat loss and fragmentation. Mangrove fragmentation was ubiquitous; however, there are geographic disparities between mangrove loss and fragmentation; some regions, like Cambodia and the southern Caribbean, had relatively little loss, but their forests have been extensively fragmented. In Southeast Asia, a global hotspot of mangrove loss, the conversion of forests to aquaculture and rice plantations were the biggest drivers of loss (>50%) and fragmentation. Surprisingly, conversion of forests to oil palm plantations, responsible for >15% of all deforestation in Southeast Asia, was only weakly correlated with mangrove fragmentation. Thus, the management of different deforestation drivers may increase or decrease fragmentation. Our findings suggest that large scale monitoring of mangrove forests should also consider fragmentation. This work highlights that regional priorities for conservation based on forest loss rates can overlook fragmentation and associated loss of ecosystem functionality.
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Please summerize the given abstract to a title
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Evaluation of performance from the silkworm (Bombyx mori L. when it is fed with mulberry clones in different phases of development/ Avaliação do desempenho do bicho-da-seda alimentado com clones de amoreira em diferentes estádios de desenvolvimento
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The experiment was developed at Centro Estadual de Pesquisa Aplicada em Sericicultura of Instituto de Zootecnia, Gália city, São Paulo State, Brazil, during the spring of 1996. The objective was to evaluate biological performance (larval period duration and cocoon formation) and productive (cocoon weight, cocoon shell weight, silk net and cocoons quantity per kilogram of sample) from the silkworm (Bombyx mori L.), when it is fed in the final period of its larval phase (5 instar), with mulberry leaves harvest from some clones, in three phases of vegetative development, after pruning. Analysing the biological performance, it was noticed a tendence of variance in the larval period duration in order of the plant development phase and the utilized clone, whereas, to the character cocoon formation, any decorrent influence of the treatments was observed. Regarded to productive performance, upper values of cocoons weight and cocoons shell weight, which resulted in a smaller number per kilogram of sample, they were obtained from the treatment where mulberry harvest leaves were provided to the worms in a development of thirteen weeks, to the IZ-56/4 and IZ-40 clones and roughly ten weeks to the IZ-10/4 and Korin clones. To the silk net character content any significant variance was observed.
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A new protocol for monitoring operational outcomes of environmental management in commercial forestry plantations
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Environmental degradation is a global phenomenon with a high likelihood of influencing human quality of life. Effective management responses are needed to achieve societal goals of sustainability. We develop here a new monitoring protocol (Management Check: MATCH) that comprehensively evaluates management outcomes at the operational level. Using the Driver-Pressure-State-Impact-Response (DPSIR) framework, we identified pressures influencing ecosystem integrity inside conservation corridors and commercial compartments of a timber production landscape mosaic. They were 1) domestic livestock grazing (the only exogenous pressure), 2) fire management, 3) invasive alien plants (IAPs), and potential soil erosion from two sources: 4) roads, and 5) harvested timber compartments. We assessed the effects of these on wetland and stream buffers. Environmental incidents accounted for more serious management issues (e.g. oil spills). Management responses were systematically unpacked into point-form questions, which formed the building blocks of our monitoring protocol. We assessed management in twelve plantations in KwaZulu-Natal, South Africa. Answers were compared with Best Operational Practice (BOP), and reworked into a Weighted Index of Compliance (WIC) per section. We found that there was poor management of livestock grazing, but good management of IAPs, roads, and timber compartments. Management of wetland and stream buffers was very good. Fire management presented problems linked to lack of direct effects, measurable at the spatial and temporal scales of operations. We discuss operational outcomes within their respective legislative frameworks, and suggest ways of improving management operations, where needed. MATCH is the first monitoring protocol to comprehensively assess environmental management of commercial forestry at the operational level, and to clearly translate operational activities into measurable progress towards strategic goals. In doing so, MATCH breaks down silos and builds bridges for efficient environmental management in dynamic socio-ecological systems. Moreover, the principles developed here can be applied to build tools that help manage major risks in other economic sectors too. Overall, MATCH strengthened strategic and informed action, which is necessary at multiple levels of an organization, to combat major societal risks, such as environmental degradation.
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Please summerize the given abstract to a title
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Histomorphometrical study on the skin of different regions of the Caribbean common opossum (Didelphis marsupialis Linnaeus, 1758).
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Common opossums (Didelphis marsupialis) are found throughout the Caribbean island of Trinidad and Tobago. The present work was conducted on the fresh normal skin of 10 common opossums and aimed to provide morphometric data and a histological description of the skin in different regions of the body. In the examined regions, the skin presented a typical thin skin morphology, with numerous folds on the surface. The dermis-epidermis junction is smooth, without the occurrence of dermal papillae. The average thickness of the opossum epidermis was 19.5 µm. The cranial region of the back showed the greatest epidermal thickness, and together with the other areas of the back presented an epidermis 2-3 times thicker compared with the other areas examined. To further confirm that the skin changes in the opossum are age- or diet-related, additional studies are required.
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Please summerize the given abstract to a title
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Kidney developmental effects of metal-herbicide mixtures: Implications for chronic kidney disease of unknown etiology.
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Chronic kidney disease of unknown etiology (CKDu) is an emerging global concern affecting several agricultural communities in the Americas and South Asia. Environmental contaminants such as heavy metals (e.g., Cd, As, Pb, and V) and organic pesticides (e.g., glyphosate) in the drinking water have been hypothesized to play a role in childhood onset and progression of this disease. However, a comprehensive analysis of chemical contaminants in the drinking water and effects of these compounds and their mixtures on kidney development and function remains unknown. Here, we conducted targeted and non-targeted chemical analyses of sediment and drinking water in CKDu affected regions in Sri Lanka, one of the most affected countries. Using zebrafish Danio rerio, a toxicology and kidney disease model, we then examined kidney developmental effects of exposure to (i) environmentally derived samples from CKDu endemic and non-endemic regions and (ii) Cd, As, V, Pb, and glyphosate as individual compounds and in mixtures. We found that drinking water is contaminated with various organic chemicals including nephrotoxic compounds as well as heavy metals, but at levels considered safe for drinking. Histological studies and gene expression analyses examining markers of kidney development (pax2a) and kidney injury (kim1) showed novel metal and glyphosate-metal mixture specific effects on kidney development. Mitochondrial dysfunction is directly linked to kidney failure, and examination of mixture specific mitochondrial toxicity showed altered mitochondrial function following treatment with environmental samples from endemic regions. Collectively, we show that metals in drinking water, even at safe levels, can impede kidney development at an early age, potentiating increased susceptibility to other agrochemicals such as glyphosate. Drinking water contaminant effects on mitochondria can further contribute to progression of kidney dysfunction and our mitochondrial assay may help identify regions at risk of CKDu.
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Please summerize the given abstract to a title
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Canopy parkour: movement ecology of post-hatch dispersal in a gliding nymphal stick insect (Extatosoma tiaratum)
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For flightless arboreal arthropods, moving from the understory into tree canopies is cognitively and energetically challenging because vegetational structures present complex three-dimensional landscapes with substantial gaps. Predation risk and wind-induced perturbations in the canopy may further impede the movement process. In the Australian stick insect Extatosoma tiaratum, first-instar nymphs hatch on the forest floor and disperse toward tree canopies in the daytime. Here, we address how their tactic responses to environmental cues and movement strategies are adapted to the canopy environment. Newly hatched nymphs ascend with high endurance, travelling >100 m within 60 minutes. Navigation toward open canopies is underpinned by negative gravitaxis, positive phototaxis, and visual responses to vertically oriented contrast patterns. Nymphal E. tiaratum also use directed jumping to cross gaps, and respond to tactile stimulation and potential threat with a self-dropping reflex, resulting in aerial descent. Post-hatch dispersal in E. tiaratum thus consists of visually mediated displacement both on vegetational structures and in the air; within the latter context, gliding is then an effective mechanism enabling recovery after predator- and perturbation-induced descent. These results further support the importance of a diurnal niche, in addition to the arboreal spatial niche, in the evolution of gliding in wingless arboreal invertebrates.
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Please summerize the given abstract to a title
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Metaplasia in swim bladder epithelium of the endangered annual fish Austrolebias nigrofasciatus (Cyprinodontiformes: Rivulidae) results in inadequate swimming and delayed growth
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Laboratory breeding of annual fish is often impaired when fish fail to inflate the swim bladder after hatching. These fish, which are known as belly-sliders, cannot swim in the water column, moving mainly on the bottom of water. Therefore, we wanted to understand the factors underlying failed inflation of swim bladder in the annual fish Austrolebias nigrofasciatus and determine the implications of this condition on the growth of juveniles. To identify how the initial filling of the gaseous vesicle is compromised, and to determine the implications of this condition on juvenile growth, we analysed the histology of the swim bladder of both normal swimming fish and belly-sliders during their initial growth phase (first month of life). In addition to slower growth rate compared with fish swimming normally, we found that belly-sliders have metaplasia characterized by epithelium peeling of the swim bladder and the presence of haemorrhage. Based on our findings, it can be concluded that metaplasia of the swim bladder is recurrent in annual fish bred in the laboratory, which explains the large number of unviable larvae. However, its causes remain unknown.(AU)
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Please summerize the given abstract to a title
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Phylogenetic Distribution of csp1 Types in Aspergillus fumigatus and Their Correlates to Azole Antifungal Drug Resistance
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In Aspergillus fumigatus, the repetitive region of the csp1 gene is one of the most frequently used loci for intraspecies typing of this human pathogenic mold. Using PCR amplification and Sanger sequencing of only a single marker, csp1 typing is readily available to most laboratories and highly reproducible. Here, I evaluate the usefulness of the csp1 marker for resistance detection and epidemiologic stratification among A. fumigatus isolates. After resolving nomenclature conflicts from published studies and adding novel csp1 types, the number of known types now adds up to 38. Their distribution mostly correlates with A. fumigatus population structure, and they are also meaningful for narrowly defined cases of azole resistance phenotypes. Isolates carrying the pandemic resistance allele TR(34)/L98H show signs of interclade crossing of strains with t02 or t04A, into the t11 clade. Furthermore, absolute differences in voriconazole MIC values between t02/t04B versus t11 TR(34)/L98H isolates indicate that the genetic background of resistance mutations may have a pivotal role in cross-resistance phenotypes and, thus, clinical outcome and environmental selection. Despite the general genetic similarity of isolates with identical csp1 types, outcrossing into other clades is also observed. The csp1 type alone, therefore, does not sufficiently discriminate genetic clades to be used as the sole marker in epidemiologic studies. IMPORTANCE Aspergillus fumigatus is a ubiquitously distributed saprophytic mold and a leading cause of invasive aspergillosis in human hosts. Pandemic azole-resistant strains have emerged on a global scale, which are thought to be propagated through use of azole-based fungicides in agriculture. To perform epidemiologic studies, genetic typing of large cohorts is key. Here, I evaluate the usefulness of the frequently used csp1 marker for resistance detection and epidemiologic stratification among A. fumigatus isolates. The phylogenetic distribution of csp1 types mostly correlates with A. fumigatus population structure and is also meaningful for narrowly defined cases of azole resistance phenotypes. Nevertheless, outcrossing of csp1 into other clades is also observed. The csp1 type alone, therefore, does not sufficiently discriminate genetic clades and should not be used as the sole marker in epidemiologic studies.
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Please summerize the given abstract to a title
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Honey Bees and Industrial Agriculture: What Researchers are Missing, and Why it's a Problem
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Industrial agriculture is the root cause of many health problems that honey bees (Apis mellifera Linneaus, 1758) face, but honey bee researchers seldom call attention to this fact. We often discuss the stressors that contribute to colony loss (e.g., pathogens, pesticides, poor nutrition), but we rarely talk about where those stressors come from. This is a problem because we cannot resolve honey bee health issues unless we confront the systems that cause them harm. In this forum article, I unpack the relationship between honey bee health and industrial agriculture. I propose steps we can take to reframe our research to account for the impacts of this destructive system, and I discuss the uncomfortable questions that surface when we engage in this process. The goal of this article is to encourage conversation within the honey bee research community around the impacts of industrial agriculture, so that we can fully engage in the transformative change needed to support honey bee health.
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Please summerize the given abstract to a title
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Biological and productive performance of silkworm Eri fed with Ricinus communis, Manihot utilissima and Carica papaya leaves/ Desempenho biológico e produtivo do bicho-da-seda Eri alimentado com folhas de mamoneira, mandioqueira e mamoeiro
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Biological and productive aspects of eri silkworm (Philosamia ricini) were evaluated, when the caterpillars in the final of the larval phase, were fed with castor leaves (Ricinus communis), cassava leaves (Manihot utilissima) and papaya leaves (Carica papaya). The study was developed at Unidade de Pesquisa e Desenvolvimento de Gália, SP, APTA, SAA, in august of 2005. It was used a completely randomized design, with six replications for treatment. Caterpillars fed with castor leaves presented in general, the best biological performance and a productive performance superior to caterpillars fed with cassava leaves. The utilization of papaya leaves was not adequate for the rearing of eri silkworm.
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Please summerize the given abstract to a title
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Divergent impacts of warming weather on wildlife disease risk across climates.
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Disease outbreaks among wildlife have surged in recent decades alongside climate change, although it remains unclear how climate change alters disease dynamics across different geographic regions. We amassed a global, spatiotemporal dataset describing parasite prevalence across 7346 wildlife populations and 2021 host-parasite combinations, compiling local weather and climate records at each location. We found that hosts from cool and warm climates experienced increased disease risk at abnormally warm and cool temperatures, respectively, as predicted by the thermal mismatch hypothesis. This effect was greatest in ectothermic hosts and similar in terrestrial and freshwater systems. Projections based on climate change models indicate that ectothermic wildlife hosts from temperate and tropical zones may experience sharp increases and moderate reductions in disease risk, respectively, though the magnitude of these changes depends on parasite identity.
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Please summerize the given abstract to a title
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Building from the Bottom Up: A Closer Look into the Teaching and Learning of Life’s Principles in Biomimicry Design Thinking Courses
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Biomimicry education is grounded in a set of natural design principles common to every known lifeform on Earth. These Life’s Principles (LPs) (cc Biomimicry 3.8), provide guidelines for emulating sustainable strategies that are field-tested over nearly four billion years of evolution. This study evaluates an exercise for teaching LPs to interdisciplinary students at three universities, Arizona State University (ASU) in Phoenix, Arizona (USA), College of Charleston (CofC) in Charleston, South Carolina (USA) and The Hague University of Applied Sciences (THUAS) in The Hague (The Netherlands) during the spring 2021 semester. Students researched examples of both biological organisms and human designs exhibiting the LPs. We gauged the effectiveness of the exercise through a common rubric and a survey to discover ways to improve instruction and student understanding. Increased student success was found to be directly linked to introducing the LPs with illustrative examples, assigning an active search for examples as part of the exercise, and utilizing direct assessment feedback loops. Requiring students to highlight the specific terms of the LP sub-principles in each example is a suggested improvement to the instructions and rubric. An iterative, face-to-face, discussion-based teaching and learning approach helps overcome minor misunderstandings. Reiterating the LPs throughout the semester with opportunities for application will highlight the potential for incorporating LPs into students’ future sustainable design process.
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Please summerize the given abstract to a title
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Estimation of additive genetic, dominance, and mate sire variances for fertility traits in Thai native (Pradu Hang Dam) chickens.
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The objective of this study was to compare the appropriate models used to estimate the value of genetic parameters in fertility traits: fertility (FER), hatchability of fertile eggs (HOF), and hatchability of eggs set (HOS) in Thai native (Pradu Hang Dam) chickens. Data were collected for each fertility trait from 3435 test-week records from 715 hens, 158 mate sires, and 972 pedigree animals. Three random regression models were analyzed: model 1 (M1: A + PE) was adjusted by using additive genetic and permanent environmental effects. Model 2 (M2: A + PE + D) was adjusted by using the dominance effect. Finally, model 3 (M3: A + MS + PE + D) was adjusted by using the mate sire effect. The results found the low heritability of FER (M1 to M3), HOF (M1 to M3), and HOS (M1 to M3) ranged from 0.031-0.040, 0.037-0.066, and 0.040-0.059, respectively. Adjustment for the dominance and mate sire effects in M3 reduced the upward bias in heritability and improved the accuracy of variance component estimates compared to M1 and M2. In conclusion, the genetic evaluation for FER, HOF, and HOS can include the dominance and MS effects to increase the accuracy of evaluation of breeding values and plan for mate selection in breeding programs.
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Please summerize the given abstract to a title
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Availability of sedimentary organic matter for benthic fishes of the upper Paraná river floodplain - DOI: 10.4025/actascibiolsci.v26i2.1634/ Disponibilidade de matéria orgânica sedimentar para peixes benticos da planície de inundação do rio Paraná - DOI: 10.4025/actascibiolsci.v26i2.1634
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This work aims to investigate the hypothesis that sedimentary organic matter presents concentration variations in accordance to the size of sediment particles and to proximity with the river"s margin. This organic matter is known as a feeding source for benthonic fishes. Sampling of the sediment was carried out in dry and rainy periods, at three Paraná River floodplain subsystems. Three sampling points were established: right margin, center and left margin. The samples (n = 88) were submitted to granulometric fractionation ( 70µm; between 70 and 200µm; > 200µm). Low variability in organic matter concentration was observed for samples from the center of the subsystems. Particles, smaller than 70µm, had high variability in organic matter concentration. The rainy period was shown to affect concentration of organic matter adhered to the sediment fractions in transversal section at the sampled environments. With support of literature, the experiment lead to the conclusion that fish species which ingest particles of detritus 70µm obtain more organic matter of sediment
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Please summerize the given abstract to a title
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Carbon and nitrogen stocks and forms of N in a red dysthropic argisol grown or not with peanut forage/ Estoque de carbono e de nitrogênio e formas de N em um argissolo vermelho distrófico cultivado ou não com amendoim-forrageiro
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The low availability of nitrogen (N) is considered one of the most limiting factors for the productivity of pastures, often responsible for their degradation. Overall, due to the high cost of nitrogen fertilizers, it is not applied in sufficient quantities. In this context, the cultivation of legumes is an option for adding nitrogen in the soil and simultaneously is into high-protein food. Forage legume may reduce the emission of greenhouse gases, changing nutrient cycling (C and N) and can improve productivity and sustainability of agricultural systems. Most of the N in the soil is in the organic form compounds, that is converted into inorganic fraction, the predominant mineral forms of nitrogen (NH4+ and NO3-), available to plants by mineralization process. The C:N ratios from soil and plant residues affect the decomposition rate and the balance between N mineralization and N immobilization by microbes. The aim of this study was to evaluate the improvements in soil quality by comparing the forage legume Arachis pintoi cv. Belmonte, cultivated for eight years and a bare soil - an adjacent area (AA) in a soil Ultissol (Red Dysthrophic argisol). We evaluated the levels and stocks of C, total N and C:N, NH4+ and NO3- in soil from a depth of 0-20 cm. The experimental design was a randomized complete block with ten replications. Variance analysis (ANOVA) was used to detect signific
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Please summerize the given abstract to a title
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High throughput in vitro screening of changed algal community structure using the PhotoBiobox.
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In a previous study, the sequential optimization and regulation of environmental parameters using the PhotoBiobox was demonstrated with high throughput screening tests. In this study, we estimated changes in the biovolume-based composition of a polyculture built in vitro and composed of three algal strains: Chlorella sp., Scenedesmus sp., and Parachlorella sp. This study was performed using the PhotoBiobox under different temperatures (10-36°C) and light intensities (50-700 μmol m-2 s-1) in air and in 5% CO2. In 5% CO2, Chlorella sp. exhibited better adaptation to high temperatures than in air conditions. Pearson's correlation analysis showed that the composition of Parachlorella sp. was highly related to temperature whereas Chlorella sp. and Scenedesmus sp. showed negative correlations in both air and 5% CO2. Furthermore, light intensity slightly affected the composition of Scenedesmus sp., whereas no significant effect was observed in other species. Based on these results, it is speculated that temperature is an important factor in influencing changes in algal polyculture community structure (PCS). These results further confirm that the PhotoBiobox is a convenient and available tool of performing lab-scale experiments on PCS changes. The application of the PhotoBiobox to the study of PCS will provide new insight into polyculture-based ecology.
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