Training in progress, epoch 1

.gitignore

@@ -0,0 +1 @@
+checkpoint-*/

config.json

@@ -0,0 +1,51 @@
+{
+  "_name_or_path": "microsoft/biogpt",
+  "activation_dropout": 0.0,
+  "activation_function": "gelu_new",
+  "architectures": [
+    "GPT2ForTokenClassification"
+  ],
+  "attention_probs_dropout_prob": 0.1,
+  "attn_pdrop": 0.1,
+  "bos_token_id": 0,
+  "embd_pdrop": 0.1,
+  "eos_token_id": 2,
+  "hidden_act": "gelu",
+  "hidden_dropout_prob": 0.1,
+  "id2label": {
+    "0": "O",
+    "1": "B-Disease",
+    "2": "I-Disease"
+  },
+  "initializer_range": 0.02,
+  "intermediate_size": 4096,
+  "label2id": {
+    "B-Disease": 1,
+    "I-Disease": 2,
+    "O": 0
+  },
+  "layer_norm_eps": 1e-12,
+  "layer_norm_epsilon": 1e-05,
+  "layerdrop": 0.0,
+  "model_type": "gpt2",
+  "n_embd": 1024,
+  "n_head": 16,
+  "n_inner": null,
+  "n_layer": 24,
+  "n_positions": 1024,
+  "pad_token_id": 1,
+  "reorder_and_upcast_attn": false,
+  "resid_pdrop": 0.1,
+  "scale_attn_by_inverse_layer_idx": false,
+  "scale_attn_weights": true,
+  "scale_embedding": true,
+  "summary_activation": null,
+  "summary_first_dropout": 0.1,
+  "summary_proj_to_labels": true,
+  "summary_type": "cls_index",
+  "summary_use_proj": true,
+  "torch_dtype": "float32",
+  "transformers_version": "4.28.1",
+  "use_cache": true,
+  "vocab_size": 42384
+}

pytorch_model.bin

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:2540a3dc040c7fd658f9030283570d73a054d1450aad2790aa37877bdd29046f
+size 1412334373

runs/Apr14_20-09-29_f63ed2dace1a/1681502983.1417012/events.out.tfevents.1681502983.f63ed2dace1a.191.1

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:14658972543d042c3487beea9674cb7ab216bb7600c220be321324f520808102
+size 5876

runs/Apr14_20-09-29_f63ed2dace1a/1681503133.1979704/events.out.tfevents.1681503133.f63ed2dace1a.191.3

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:c51d0812fe157a8614aedd8f354bc08cf6e6280cf8d0bcb96444f0714f22338e
+size 5876

runs/Apr14_20-09-29_f63ed2dace1a/events.out.tfevents.1681502983.f63ed2dace1a.191.0

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:02fcf4e9b4d9efbf56d05cf269245b3ae854215b50cc6b1da096e1e2a824286d
+size 4664

runs/Apr14_20-09-29_f63ed2dace1a/events.out.tfevents.1681503133.f63ed2dace1a.191.2

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:b2b98a7ee50d54c8553fcf190e11c8b44f77fe61be3d9ec493c12b6034612107
+size 5136

special_tokens_map.json

@@ -0,0 +1,7 @@
+{
+  "bos_token": "<s>",
+  "eos_token": "</s>",
+  "pad_token": "<pad>",
+  "sep_token": "</s>",
+  "unk_token": "<unk>"
+}

tokenizer_config.json

@@ -0,0 +1,10 @@
+{
+  "bos_token": "<s>",
+  "clean_up_tokenization_spaces": true,
+  "eos_token": "</s>",
+  "model_max_length": 1024,
+  "pad_token": "<pad>",
+  "sep_token": "</s>",
+  "tokenizer_class": "BioGptTokenizer",
+  "unk_token": "<unk>"
+}

training_args.bin

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:a292043f4ddaba920ad6e633bb0c949c66d5fd1e946d44f0f08708646790c2a3
+size 3579