add skm-tea models trained for Neurips D&B Track (2021)

.gitattributes

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neurips2021/recon-models/6x/U-Net_E1+E2/config.yaml

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+AUG_TEST:
+  UNDERSAMPLE:
+    ACCELERATIONS:
+    - 6
+AUG_TRAIN:
+  NOISE_P: 0.2
+  UNDERSAMPLE:
+    ACCELERATIONS:
+    - 6
+    CALIBRATION_SIZE: 24
+    CENTER_FRACTIONS: []
+    NAME: PoissonDiskMaskFunc
+    PRECOMPUTE:
+      NUM: 100000
+      SEED: -1
+  USE_NOISE: false
+CUDNN_BENCHMARK: false
+DATALOADER:
+  ALT_SAMPLER:
+    PERIOD_SUPERVISED: 1
+    PERIOD_UNSUPERVISED: 1
+  DATA_KEYS: []
+  DROP_LAST: true
+  FILTER:
+    BY: []
+  GROUP_SAMPLER:
+    AS_BATCH_SAMPLER: true
+    BATCH_BY:
+    - num_coils
+    - matrix_shape
+  NUM_WORKERS: 8
+  PREFETCH_FACTOR: 2
+  SAMPLER_TRAIN: GroupSampler
+  SUBSAMPLE_TRAIN:
+    NUM_TOTAL: -1
+    NUM_TOTAL_BY_GROUP: []
+    NUM_UNDERSAMPLED: 0
+    NUM_VAL: -1
+    NUM_VAL_BY_GROUP: []
+    SEED: 1000
+DATASETS:
+  QDESS:
+    DATASET_TYPE: ''
+    ECHO_KIND: echo1+echo2
+    KWARGS: []
+  TEST:
+  - stanford_qdess_v0.1.0_test
+  TRAIN:
+  - stanford_qdess_v0.1.0_train
+  VAL:
+  - stanford_qdess_v0.1.0_val
+DESCRIPTION:
+  BRIEF: Recon only unet baseline - 4 pooling layers, 32 channels, L1 loss, lr=1e-3,
+    echo=echo1+echo2, acc=6
+  ENTITY_NAME: mtrecon
+  EXP_NAME: recon-baseline/unet-6x-echo1+echo2/version_002
+  PROJECT_NAME: mtrecon
+  TAGS:
+  - neurips
+  - recon-baseline
+  - baseline
+  - unet
+  - unet_6x
+MODEL:
+  CASCADE:
+    ITFS:
+      PERIOD: 0
+    RECON_MODEL_NAME: ''
+    SEG_MODEL_NAME: ''
+    SEG_NORMALIZE: ''
+    USE_MAGNITUDE: false
+    ZERO_FILL: false
+  CS:
+    MAX_ITER: 200
+    REGULARIZATION: 0.005
+  DENOISING:
+    META_ARCHITECTURE: GeneralizedUnrolledCNN
+    NOISE:
+      STD_DEV:
+      - 1
+      USE_FULLY_SAMPLED_TARGET: true
+      USE_FULLY_SAMPLED_TARGET_EVAL: null
+  DEVICE: cpu
+  META_ARCHITECTURE: UnetModel
+  N2R:
+    META_ARCHITECTURE: GeneralizedUnrolledCNN
+    USE_SUPERVISED_CONSISTENCY: false
+  NORMALIZER:
+    KEYWORDS: []
+    NAME: TopMagnitudeNormalizer
+  PARAMETERS:
+    INIT: []
+    USE_COMPLEX_WEIGHTS: false
+  RECON_LOSS:
+    NAME: l1
+    RENORMALIZE_DATA: false
+    WEIGHT: 1.0
+  SEG:
+    ACTIVATION: sigmoid
+    CLASSES: []
+    INCLUDE_BACKGROUND: false
+    IN_CHANNELS: null
+    LOSS_NAME: DiceLoss
+    LOSS_WEIGHT: 1.0
+    MODEL:
+      DYNUNET_MONAI:
+        DEEP_SUPERVISION: false
+        DEEP_SUPR_NUM: 1
+        KERNEL_SIZE:
+        - 3
+        NORM_NAME: instance
+        RES_BLOCK: false
+        STRIDES:
+        - 1
+        UPSAMPLE_KERNEL_SIZE:
+        - 2
+      UNET_MONAI:
+        ACTIVATION:
+        - prelu
+        - {}
+        CHANNELS: []
+        DROPOUT: 0.0
+        KERNEL_SIZE:
+        - 3
+        NORM:
+        - instance
+        - {}
+        NUM_RES_UNITS: 0
+        STRIDES: []
+        UP_KERNEL_SIZE:
+        - 3
+      VNET_MONAI:
+        ACTIVATION:
+        - elu
+        - inplace: true
+        DROPOUT_DIM: 3
+        DROPOUT_PROB: 0.5
+    USE_MAGNITUDE: true
+  TASKS:
+  - recon
+  TB_RECON:
+    CHANNELS:
+    - 16
+    - 32
+    - 64
+    DEC_NUM_CONV_BLOCKS:
+    - 2
+    - 3
+    ENC_NUM_CONV_BLOCKS:
+    - 1
+    - 2
+    - 3
+    KERNEL_SIZE:
+    - 5
+    MULTI_CONCAT: []
+    ORDER:
+    - conv
+    - relu
+    STRIDES:
+    - 2
+    USE_MAGNITUDE: false
+  UNET:
+    BLOCK_ORDER:
+    - conv
+    - instancenorm
+    - - leakyrelu
+      - negative_slope: 0.2
+    - dropout
+    CHANNELS: 32
+    DROPOUT: 0.0
+    IN_CHANNELS: 2
+    NUM_POOL_LAYERS: 4
+    OUT_CHANNELS: 2
+  UNROLLED:
+    CONV_BLOCK:
+      ACTIVATION: relu
+      NORM: none
+      NORM_AFFINE: false
+      ORDER:
+      - norm
+      - act
+      - drop
+      - conv
+    DROPOUT: 0.0
+    FIX_STEP_SIZE: false
+    KERNEL_SIZE:
+    - 3
+    NUM_EMAPS: 1
+    NUM_FEATURES: 256
+    NUM_RESBLOCKS: 2
+    NUM_UNROLLED_STEPS: 5
+    PADDING: ''
+    SHARE_WEIGHTS: false
+  WEIGHTS: ''
+OUTPUT_DIR: results://skm-tea/neurips2021/6x/U-Net_E1+E2
+SEED: 1000
+SOLVER:
+  BASE_LR: 0.001
+  CHECKPOINT_MONITOR: val_loss
+  CHECKPOINT_PERIOD: 1
+  EARLY_STOPPING:
+    MIN_DELTA: 0.0
+    MONITOR: val_loss
+    PATIENCE: 0
+  GAMMA: 1.0
+  GRAD_ACCUM_ITERS: 1
+  LR_SCHEDULER_NAME: ''
+  MAX_ITER: 20
+  MIN_LR: null
+  MOMENTUM: 0.9
+  OPTIMIZER: Adam
+  STEPS: []
+  TEST_BATCH_SIZE: 16
+  TRAIN_BATCH_SIZE: 24
+  WARMUP_FACTOR: 0.001
+  WARMUP_ITERS: 1000
+  WARMUP_METHOD: linear
+  WEIGHT_DECAY: 0.0001
+  WEIGHT_DECAY_NORM: 0.0
+TEST:
+  EVAL_PERIOD: 1
+  EXPECTED_RESULTS: []
+  FLUSH_PERIOD: 1000
+  QDESS_EVALUATOR:
+    ADDITIONAL_PATHS: []
+  VAL_METRICS:
+    RECON:
+    - psnr
+    - psnr_scan
+    - psnr_mag
+    - psnr_mag_scan
+    - nrmse
+    - nrmse_scan
+    - nrmse_mag
+    - nrmse_mag_scan
+    - ssim (Wang)
+    SEM_SEG: []
+TIME_SCALE: epoch
+VERSION: 1
+VIS_PERIOD: -400

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neurips2021/recon-models/6x/U-Net_E1+E2/scan_metrics.csv

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+161,MTR_188,0.76027036,0.74929523,ssim (Wang)_scan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
+162,MTR_196,0.76941794,0.74849814,ssim (Wang)_scan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
+163,MTR_198,0.7282694,0.70235735,ssim (Wang)_scan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
+164,MTR_199,0.7860446,0.7031674,ssim (Wang)_scan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
+165,MTR_218,0.7782424,0.7112006,ssim (Wang)_scan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
+166,MTR_219,0.76770514,0.7316361,ssim (Wang)_scan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
+167,MTR_221,0.79790694,0.76135224,ssim (Wang)_scan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
+168,MTR_224,0.7140984,0.70718336,ssim (Wang)_scan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
+169,MTR_227,0.73324406,0.71244395,ssim (Wang)_scan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
+170,MTR_235,0.76752156,0.72809017,ssim (Wang)_scan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
+171,MTR_237,0.74604106,0.7252014,ssim (Wang)_scan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
+172,MTR_240,0.79772526,0.7631058,ssim (Wang)_scan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
+173,MTR_241,0.76908,0.7422495,ssim (Wang)_scan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
+174,MTR_244,0.78076494,0.73783696,ssim (Wang)_scan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
+175,MTR_248,0.7934906,0.7512719,ssim (Wang)_scan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
+176,MTR_066,0.80781025,0.6639099,ssim (Wang)_scan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
+177,MTR_173,0.7819885,0.7907628,ssim (Wang)_scan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
+178,MTR_178,0.7570243,0.70615655,ssim (Wang)_scan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
+179,MTR_223,0.72118753,0.72092944,ssim (Wang)_scan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
+180,MTR_005,,,t2_recon_gt,32.73131429320983,27.11039868001995,20.501396753491886,30.57102376599634,27.35588918124129,20.930302096177556,25.72927164704588,40.23342426803965,36.796611165524,40.908497146480656,38.25488019914946,33.79012059369202,35.39124704848718,33.66843752399969,28.497846774968757,35.695029650273455,32.791376768486664,27.350285581969743,30.565215479331577,18.02563753377117,32.68610453903811,24.773490522422566,25.97101624480544,34.94334935897436,43.3114186097189,30.22186306074265,34.81203984890008,28.60626973094462,26.62504752851711,25.019025157232704,29.526626672819567,23.778105018407288,21.713338117695308,22.46749024707412,31.5695108393552,32.30175707426704,35.84055380301437,41.31318085357228,30.779474529600737,28.778698683191323,28.90408660005124,28.479568952963447,32.47798803964938,31.687726015741333,25.991651326475367,25.34757864969954,18.02563753377117,18.681120428604707,17.628672191853287
+181,MTR_006,,,t2_recon_gt,40.04453962250158,29.879695587872813,25.67926670992862,32.57818181818182,35.61708328901181,26.185839909808344,38.27369643572287,45.810166092134125,41.48685655456417,45.674300313552436,51.133289831430126,44.15154809737651,51.06379504504504,37.777838543285064,33.36226855713094,39.013065068493155,43.29017424975799,34.9572351719363,44.6535827546064,23.69505359708255,35.59087416571708,28.892792199235735,28.319042842814156,41.320452969724975,42.53042839983985,35.51404297235732,35.67710751796573,35.397207505263395,35.780591982015736,25.441424075531078,31.282301587301585,33.56471932943865,26.283621613347623,33.3322192513369,40.21808066759388,35.792618086873965,39.721761416589,49.74898648648648,48.16111481234732,41.08387307818122,37.76394529631165,30.132139399806388,35.16380197171024,40.096288441145276,35.21025733961581,36.818581727232605,23.69505359708255,22.82269705603039,24.03309209114048
+182,MTR_030,,,t2_recon_gt,40.07598016039395,35.62168752697454,25.304686704024455,34.94289541575709,43.492132428159586,28.770808254514186,33.04933817594834,45.3695078781148,33.93188067444876,47.31789381050161,50.32164206642067,39.73148379052369,43.20520909757887,40.58311371745504,29.578923017606993,41.176656322348656,46.92548520079671,34.34436225298531,38.10227134455486,20.968663093587196,34.669909925220935,29.2174681619464,29.862394845176304,38.713340898038574,39.364028225187916,34.34258092738407,34.97896084586156,35.534663875655646,27.43119221411192,31.559860199110354,37.27281380130874,32.660883084577115,29.033842750854614,31.14437821171634,35.89769470404985,41.454799604156364,45.14398589065256,34.986164488854726,43.18142028985507,39.652241918665275,31.143961748633878,36.123975807371906,40.873713086977574,33.70082502578205,34.82858838893505,34.89523043328354,20.212778660710452,19.77517707240294,21.04342088883356
+183,MTR_034,,,t2_recon_gt,31.40828923937929,29.06056824838899,21.34295051353875,26.870401756087603,27.440633955709945,23.5634954954955,26.559234543670264,38.950664627690855,32.668678231126314,36.54431579486654,37.57863277224321,35.576843631092586,32.905397201802224,33.995782336884744,26.877256446991403,31.699314683168822,32.53818550824769,29.553094786301614,29.786995321016832,17.75390150663368,28.254155325712212,22.560671764592005,21.667533104462972,33.25629598662208,33.95527495259438,28.2992956798708,28.207991925494333,27.553282574133227,26.310344827586206,22.64546288743883,28.267883880825057,24.53907734056988,22.098670977011494,24.24961767204758,34.00646882294098,31.204025544531877,31.586062840091273,34.03172133919513,29.436505759736697,30.855318078953985,29.72010636726252,26.685406685686605,29.812048684855412,28.76517615176152,25.51899130657121,27.274473229706388,17.75390150663368,19.02291854911579,16.95231358799788
+184,MTR_048,,,t2_recon_gt,33.38004575614666,27.522514050206066,21.430876446964326,24.12708275925416,26.386990425426905,25.010986091576807,30.015059872922777,42.9235488976407,32.73771059312255,35.47422709519552,41.77837811714672,42.63107309486781,42.274563180552036,35.29158682412359,27.150291851505955,29.731886011807916,34.163782912412685,33.84446090278319,36.034270256824826,23.046882410378018,30.429571724955544,22.848209804249624,23.928145896656538,37.11287772803581,35.96283793056127,30.61688380952381,30.252282397057762,31.0224109905911,22.900875118259222,21.608156831839228,26.462274337776282,31.102731339769253,26.08727672793166,34.94428369795342,33.090942857142856,33.740334286342645,37.510129268763265,46.84986945169713,39.756851790995725,39.4505149330587,27.51594202898551,27.341075604053,31.616282628262827,37.70227055122418,32.11051983782218,36.776591289782246,23.047055849069768,18.9969734919641,27.117101905261322
+185,MTR_052,,,t2_recon_gt,32.7966813781178,19.566987858932357,25.497423018126227,30.105573164289485,28.61531475101785,24.436790123456788,31.56959521946361,29.46345817290865,35.72077532662241,40.327682893414924,39.6195048994327,34.02127022168963,39.09965748324645,24.752027522935784,30.658845155709344,35.12450224215247,34.15377309528753,29.10866433021807,35.24565668328542,18.872110485384823,33.34132015120675,47.613725490196074,27.94955242966752,66.58125,36.12120669056153,52.14328358208956,32.17418159357628,25.76053968810233,20.091262683201805,21.250878208839993,20.312316715542522,26.374359899026327,24.012932047966142,28.28498823529412,27.081657963446474,28.524944665781323,28.546628470691935,30.535566546762592,27.76800748362956,32.27035024154589,23.330611010284333,24.63929271058872,24.051290774464675,28.2263758254953,25.627211796246648,30.030494578153927,18.872110485384823,18.425523883899515,19.058382193268184
+186,MTR_065,,,t2_recon_gt,28.170454545454547,24.784373337697943,18.37749674054759,24.539945683577947,21.87295423023578,19.204736106256554,27.320677682762167,33.94909973939825,23.126845806127577,30.75311342592592,30.85669445806768,27.629295117480417,35.16192384769539,29.448613455510007,20.79682742740182,27.6449658801758,26.553615781673226,23.515065688449067,31.293320429015672,19.373700142450144,29.464176514519174,23.39689767086674,22.08050785531604,37.22102702233035,33.84149924561264,30.633736638617236,28.371921328745593,25.221999865124587,20.248037383177568,17.90585214379553,25.570011189854537,18.731053294167015,20.22326708074534,24.22493415276558,30.917479108635096,30.290295774647888,33.622703180212014,29.126638176638178,31.357993593476998,28.035392051557462,24.878933051231677,23.588625347379306,29.256825075834175,23.14000724987917,25.34951065826518,25.938719806763284,19.373700142450144,18.87015078661127,19.744078563334824
+187,MTR_079,,,t2_recon_gt,33.766073658636266,29.294194335021572,22.27507451564829,24.755250948966683,28.123443650677938,23.74099033108702,28.223342415985467,44.61698541942814,36.20230055658627,34.77396737979242,45.94911042944785,37.473798494499135,40.405163572060125,36.91789905273575,29.25292805354155,29.75017440016912,36.809800403677954,30.647480337896884,34.39705183924011,19.42573113207547,29.031524926686213,20.339101680903827,24.797721387881925,31.931182356544824,36.2593522093522,26.99713816561107,31.066389019239796,30.801950508777292,23.770576848625627,19.816491375683636,29.0890701754386,26.389928360724824,22.71358836421598,31.118698652645413,34.883358778625954,32.69298675821481,40.126196172248804,34.708097395243485,39.89511077158135,41.61086769759451,28.571943711521552,25.761956521739126,34.25538447181784,29.939067407586375,30.25571205007825,35.66641221374046,19.42573113207547,20.1658908714766,19.000631219367296
+188,MTR_080,,,t2_recon_gt,32.74203598670057,32.12960135213894,21.668136225798925,25.148605678874382,30.572072750753332,28.492154954253458,30.68508641516447,42.95918683677119,27.559372003835094,33.15207097591889,39.52767330588628,38.711757269279396,34.86929504154872,37.485436807356756,24.5752630956604,29.154601507193423,34.97792612859097,33.40007083586318,32.795629245826134,19.61092715231788,31.13869569703849,24.97641580432738,26.412018917155905,35.83301067262348,36.091405670179604,30.752867896289125,31.479236925946072,27.353980369349003,21.443489965736664,20.925671467497082,25.385316671400172,25.888107992286265,24.16075975359343,24.10382626680455,30.269514285714283,31.389842909403917,33.270911086717895,36.27069885641678,30.622139502920632,29.520114513318394,25.515607698391772,25.895217169136433,29.132722259482822,30.637642408742153,27.214969411509934,26.56171486669679,19.61092715231788,19.026566340100327,20.15495690330669
+189,MTR_096,,,t2_recon_gt,29.586104053629093,22.231745413637935,19.248959160972507,25.679953060825348,24.274041314448862,20.126592726334792,23.838514392795794,35.35413843382795,32.61398244213887,40.13643634661152,34.91269944998094,31.798756449265774,33.45159927890806,28.823607969843835,25.91631759178147,32.9176133921944,29.667324627998784,25.888864942528734,28.67073139158576,19.459645342698927,28.176913940179244,21.790883167671506,22.27423798986366,33.291522728915226,34.02320989252881,27.885416108153652,28.435318282125277,27.408077020990998,22.842217898832686,20.7638517163993,28.41880971880972,21.938435737155057,21.623639146656462,25.675169578622814,33.06044404168554,30.15810602628002,34.78784319707138,37.20394537177542,33.78042817033224,25.269826973216404,27.563093992045214,25.258154859967046,31.426689237861982,28.7408841179951,27.092626703857693,25.486911052399826,19.459645342698927,19.59167164297942,19.30388878452001
+190,MTR_099,,,t2_recon_gt,29.939809928507852,27.07355252024658,19.279984383133783,24.49575175093298,27.533914338919928,21.135391887770663,23.213077603360606,36.350991129965294,26.927358725416976,33.81119673148532,38.935731555425306,36.83586888331242,31.804928020704157,31.81382293247158,23.187375922626625,29.1262829082682,33.28166974510528,28.875166228544924,27.562639882089638,17.38941623021244,32.4394771029555,25.39172897627619,27.67075731067233,39.44034633435831,35.78492537313433,32.87794403001164,32.049476469911404,26.29973862880651,22.595427242782407,19.787102643690464,28.83918613413715,22.946012269938652,20.15818788890575,21.79217477166132,30.4884882418813,29.361115786942406,33.81395089285714,35.01898480068827,30.991649159663865,27.709754655631098,26.256607105755247,24.295996602491506,31.116152431548837,28.395650485436896,25.18873262336395,24.485095507129408,17.38941623021244,17.451552555448412,17.33697574738213
+191,MTR_120,,,t2_recon_gt,38.60725704761214,34.96633135700486,28.302537562604343,32.00830555707338,39.90521608565088,27.57141041931385,32.5651769277971,46.6046015936255,42.985348047538196,39.97210326416029,43.81470988654781,42.32053746995849,44.76105759376921,40.795776521449945,35.58384544153548,35.975944715625516,41.866134226877904,34.834097020544256,38.65712603665405,22.643967595508546,35.03660957297044,28.81678661557155,28.04733933022651,40.74323899371068,40.88740810556079,35.1425229337664,34.914966980894285,32.401577591294455,22.71007814605228,22.789007694613773,31.187399256044635,26.198996655518396,27.10912154310946,36.64668969487622,32.6653756260434,34.939071956960326,38.21210292812778,41.62186079885195,41.896995820271684,45.11692755733528,27.1562630480167,28.51582228326906,34.46233970381402,33.15959628670121,34.07111671381134,40.3868831377592,22.643967595508546,20.837303370786515,24.948618593387042
+192,MTR_126,,,t2_recon_gt,35.46315425409269,33.19636302470751,23.38685540950455,32.24522998729352,29.51120803754061,25.103730249226256,30.72050878573302,41.22601351351351,34.25544678192044,42.48227366418266,37.41897977663749,39.53113018075589,41.327613521230546,37.22607991058955,28.740857787810388,37.26513526119403,33.459456364513024,31.90797382244037,35.886441742563605,19.077051621935603,33.96615169829344,27.249860659544822,24.715923762680607,42.62387572113713,39.81889613150064,35.35042666178355,32.574190813241906,28.56583702186695,21.327599410898383,21.62187119057294,28.72086228679722,27.426402321083174,26.85691843859092,26.74378860672615,25.822515359595226,32.71343859649123,35.88545971563981,38.15741873189572,31.133215350223548,29.606881635863154,23.346007789678676,26.77751440687181,31.976936331524083,32.02964241336463,28.82394173093402,28.078009895547005,19.077051621935603,18.656957686127477,19.603402456210993
+193,MTR_144,,,t2_recon_gt,31.319269939584707,26.788954193841953,21.52340054767239,31.027980616592863,29.644357995226734,27.321316614420063,24.056753972127325,36.41115797401619,30.393714580113343,36.09019353685245,35.28980708457148,36.84358464292819,31.788000660211264,31.616757992593154,25.886344058778818,33.4749519511089,32.48546446790841,31.63973480064947,27.894846233681108,21.506067566274282,32.160486248535996,32.29571696718048,25.54257382823083,37.06409712649772,33.566943513025535,34.76371319594984,29.653366807610997,28.566671766885975,27.952915578764145,25.58544471153846,30.66756667218817,26.375331294597352,22.444609665427507,21.293673965936737,32.32009679062659,29.270917593528818,33.729274047186934,32.19169435215947,31.641056765440915,29.951875901875905,29.96483219901431,27.38186298669295,32.12855287087555,28.992749018874978,26.916701388888892,25.54230837316339,21.506067566274282,28.2231953665772,18.065113249873363
+194,MTR_156,,,t2_recon_gt,34.899816616347984,31.415690376569042,21.087812769628993,26.205733135580214,32.038121431555496,24.061477682284448,30.115481566019948,42.63366994866617,32.56124667258207,36.866882243377475,41.6147972182056,40.2880400572246,44.26003009027081,37.007404376744084,26.74422572178478,31.504812366573212,36.85420864928499,32.04681075753309,37.149664513232395,19.48232442645074,34.67824012285866,26.48242783123612,28.744856487704595,40.80688368938623,41.593649873142446,33.957710139798266,35.44817336056274,30.27788458787515,24.911495285136954,21.243726561662918,27.411887125220456,23.948012552301254,24.20571302037201,26.32338041889917,38.548191144708426,32.36477957118767,38.580891719745225,43.36649544711651,39.50237965732934,36.79996887643946,31.103003187055656,26.479166430394105,32.47990366088632,32.249176564527396,31.070822653484683,30.92254406339664,19.48232442645074,18.314845767221836,20.89631415612318
+195,MTR_158,,,t2_recon_gt,36.322535242050044,30.23411354804127,21.482338591640918,27.62016638100414,29.444558931064282,24.007631484365643,32.271554704865395,44.063518107238366,39.45275244849713,42.316095989426294,47.04186485211885,38.90798417995303,48.48985507246377,37.10006300630063,30.29857509734073,35.01161326517891,38.1854016064257,31.340843270868824,40.298852295409176,24.50062746843189,35.617829367829366,28.15993308905528,26.941555217426124,43.056657081236516,43.19596060629375,35.989944830713426,35.2314040182075,35.681362382546865,34.13385949310805,25.002445797287198,31.869291081345963,29.95135887360838,24.782335985241556,32.71719635378172,45.33033980582524,47.27917658591233,36.88140740740741,49.611019816336395,45.492723043694966,47.135709482178875,38.86873235822427,34.64120819195347,34.2183127929179,37.891206324419294,33.2669411924857,38.81426133939996,24.50062746843189,21.171850421184903,27.550037304683336
+196,MTR_176,,,t2_recon_gt,34.68551179232102,29.860086262167048,23.22994413407821,30.647138853205654,29.579348458406052,23.895649570943924,27.156509034527996,43.27290295560608,35.346237864077665,43.304098560624546,40.99561352796647,37.31978313786236,37.523766521141084,36.478957625867416,29.03787085514834,36.83849228841621,35.30681842897017,30.261393933032434,32.3332069161167,18.77013444354852,27.628953710211867,21.660825109975033,21.89559646958337,31.778628106076425,33.89462422634836,27.047912613263662,28.107387742024077,32.68882038726908,26.688808337109197,24.76576151121606,35.50338552687262,25.265448504983386,24.571820809248553,28.50637254901961,35.416553287981856,35.07508917954816,45.26023612157749,42.38398093841642,38.717280977958886,35.67046467218332,30.56585243011836,29.505703872437355,39.964396462616286,32.99841033283656,31.140268340930593,31.623179174743836,18.77013444354852,19.73063326206751,17.612761248185777
+197,MTR_188,,,t2_recon_gt,34.11007043700839,26.571855450956573,23.71731866340668,27.936548059893735,29.8440771064359,23.05,25.52247908921933,42.34141357679648,38.06834061135371,41.99099062702004,46.60315959161741,36.5998023715415,36.41397639926383,34.36888991248272,30.64477234401349,34.9505404097435,38.070226349390595,29.78426028238183,31.159194081712716,22.219625427152753,29.140443642646606,20.214858461912282,22.5532204604497,33.15318050392399,39.661977038334314,27.208702204856266,30.75450771885639,30.9364359192148,27.15785744060025,21.179219600725954,31.017794432548182,27.90431623931624,21.574952760865,29.004232424677184,42.59395638629284,33.20923804328059,42.2396551724138,40.94615384615384,36.81853470437018,37.514103170847136,33.345404595404595,26.641449921558912,36.196517527675276,33.397823398466485,28.42778227204438,32.67314833707406,22.219625427152753,21.029220588851192,23.196706772086625
+198,MTR_196,,,t2_recon_gt,31.230066866497573,23.741434939503286,19.986222692036645,23.890075693860386,24.69995407225964,22.364500562972495,26.60778433687525,39.53499779379321,31.759979245935664,34.05943943524149,39.85769230769231,39.934351271046545,41.855126800250474,31.485867801377523,25.92719972067039,28.98210485790284,32.22480930734263,31.035633401221997,34.252527869367256,17.772381892398286,29.865666081217732,22.998109619686797,19.919479937233803,36.90672368033028,38.09233993503091,30.40104640820384,29.311497427565662,27.34485633745415,24.439306012563566,19.296895306859206,25.995318352059925,23.38743304491141,19.7547893205112,28.182738669238187,29.356615878107455,29.479747216370747,35.342475728155335,38.37918781725888,35.321048334421945,33.30486921529175,26.540346068185713,23.82185076223589,30.286375607779576,29.91460974758637,26.550809153774864,30.457308791994283,17.772381892398286,17.496586536629966,17.988307930921344
+199,MTR_198,,,t2_recon_gt,30.90165793015328,25.31937243658663,18.784525382147578,24.718258612164163,23.894893280632413,19.55945050901509,23.785130588046787,38.66595858281531,32.47372430900071,39.46346169636259,37.63477147805135,33.25386105059308,38.211063157894735,32.13708530574874,25.84491455725121,32.105059334060016,30.93168530659468,26.449183623735838,31.053027892671544,20.058566675687292,27.745408918874446,21.67278603125603,23.057099912981567,32.8497150633665,32.23590817210511,27.61262939022737,27.856286566262785,29.64168957509571,33.44375863657301,23.379037470521443,28.400527627143482,23.61943305402033,20.86202462678435,29.752058460271716,34.205827067669176,29.864640059679225,39.75195775792039,35.03824804856895,33.75049273220005,38.874374079528714,33.795598809819,26.51580751364272,33.78410386808445,28.771920555718616,26.911668112171146,33.912863860277646,20.058566675687292,18.374071961207775,21.13853910862636
+200,MTR_199,,,t2_recon_gt,30.084764674665912,26.738792694497157,20.023742090991263,22.46625028261361,32.32984591972608,27.98155570652174,27.808476901130255,37.42207675753228,24.0376316538571,29.579504860954103,36.31473714727484,34.72247191011236,33.912086092715235,32.05987793986305,22.087904524820615,26.023723927420722,34.30789107819167,31.274188495344177,30.902076002814916,19.51050761962275,29.776851983844143,26.395246096066415,23.591940407864207,33.734300595238096,33.02394290537948,30.176248203162437,29.384043355325165,25.573052593255564,26.476682393841568,25.09609375,26.40432820855615,22.583925686591275,20.557782740049916,21.989197299324836,27.469720873786407,28.86444157520981,26.596570537802027,30.953001765744556,25.134075917859366,27.445918367346938,26.923637853338793,26.843226578868606,26.49308204390068,26.582536557930258,22.907636758691204,24.724023949108144,19.51050761962275,19.918976933711708,19.120891171571348
+201,MTR_218,,,t2_recon_gt,38.06025853192115,29.57528059499662,23.796150348590484,30.509379296798272,32.0060820537428,24.548530741410488,32.980771602823275,46.049697863968525,36.62574165636588,45.037435742364686,49.294317873609984,41.41178276269185,49.284428258256135,37.65708574579542,30.149104820198925,37.67426723065439,40.12080601005921,32.79574910477071,41.00503967701518,22.483502385580493,32.14368221861781,25.2824668291362,24.918616452991454,37.580793045963325,39.37870517684494,31.82588697415104,32.4640143048726,34.04892697139635,33.414472640761296,36.108322580645165,36.81500701262272,29.58304848273457,23.710698013486425,30.375408229915088,40.93362979433019,47.209618104667605,46.23459214501511,38.22258965999068,34.02706219673577,40.936083333333336,36.54498958574404,39.58577758085954,40.681748656469615,33.28250897487036,28.378335495459535,35.0157634566093,22.483502385580493,25.850694183864913,20.44810320385597
+202,MTR_219,,,t2_recon_gt,30.613012917039207,27.633100233100233,20.968717304875497,26.277988482922957,29.266520984639115,23.701779910230616,24.9858087067048,36.03230727811182,32.31915897435898,35.57411776367962,34.58887549181368,33.497771891555004,33.28225260253355,31.87137487546418,26.700372902423865,30.92658381703626,31.944608359676856,28.583895014753846,29.160585877079452,19.644008714596954,28.81400193907691,22.06806672624367,22.09702837423313,34.20973798057302,35.01445201345175,28.731789266194784,28.897308093876255,27.788978018840993,23.398129781807878,20.23487333887043,26.307403859312984,24.99461137323069,22.33804593597525,28.079081410535483,28.14740596627756,27.89345577124259,36.275225294027805,37.931209987195906,34.39772541541814,32.198267390742174,25.61297444427642,23.848077872223747,31.017908185361627,30.646119423856803,27.961556049539535,29.961706654059807,19.644008714596954,19.88003856505845,19.405932169050608
+203,MTR_221,,,t2_recon_gt,36.359911425731866,26.307704875179713,24.481664145234493,28.704887175416715,23.915501181704435,29.76,32.805867775201854,46.83232659998692,43.68552155314248,44.6595205108126,39.03515244326883,41.07234544596508,46.81073820022865,36.56587239327972,33.685556606748655,36.43981073108041,31.470839131644865,35.143660694034935,39.735416750838354,21.3944489049467,31.683406657867717,30.410292269013194,22.194995203070036,41.33278955954323,31.19884963023829,36.26640670553936,27.044961640601947,30.640962467693004,28.795477093667934,20.851336606655757,29.054173329069393,23.119207836456557,22.981718924972004,27.688421491045396,42.711644951140066,36.581596162232884,40.88589058000823,36.07505112474438,34.11741854636592,40.79284199363733,34.60511643719191,28.0044323252355,34.22921914357683,28.101179554390562,27.450184378142808,33.45351061348262,21.3944489049467,20.27813680008631,22.181300380228134
+204,MTR_224,,,t2_recon_gt,31.952339198593013,27.031989210125882,20.346442400774443,27.152731179814225,27.25605445738971,21.663912087912088,28.28183074014832,37.288931457230426,32.28562544845731,35.868850792790354,40.63639396770319,35.11199110122358,39.53039173789173,32.143205720037486,26.351220979189222,31.561051333013502,33.87749355542336,28.348545836558664,33.96554751880241,19.112402976897087,30.32164283094976,22.74185080578169,24.520601319220738,33.55506001091108,38.39358108108108,28.680166279679426,31.896134779797404,32.610492815121994,30.457046332046332,25.083621127475872,29.89090598290598,27.61968592260235,27.721789419969383,31.376536312849158,35.37654090399701,39.78640747438215,37.25860082304526,36.63716265499635,38.03414584186809,38.385330261136716,32.733535004321524,31.80686328555678,33.23422969187675,31.539457831325304,32.40025090604963,34.41582014987511,19.112213775312192,17.848508988367993,19.717442096022687
+205,MTR_227,,,t2_recon_gt,32.54662381631636,26.294364368263864,22.781086587436334,30.683191239734064,27.591961102106968,25.669230769230772,30.726244472971047,36.13547058823529,33.27650450450451,38.35725506072875,37.0797513321492,35.71900164822227,37.329835479256076,31.198390669794104,27.87423473849921,34.45645321765432,32.274696023660866,30.660843655059594,34.023878571428575,21.53051527427151,32.75368757687577,24.961802265705458,25.530054984956948,39.54762079062958,39.602593270992,32.68511968213974,32.82440035978413,28.70413595690491,25.161235059760962,23.51081282624907,31.568559051527583,23.94675675675676,21.505150525933985,25.522583479789105,29.123718309859157,29.45569253081943,37.518161434977586,31.804111548087235,36.62185615848407,37.685921787709496,26.80263710618436,26.194059405940592,34.04254128929143,27.533670638158966,28.416154754873006,30.87732415150025,21.53051527427151,24.445792035657732,20.070565084586466
+206,MTR_235,,,t2_recon_gt,35.27072830887316,33.45295130441293,23.29783908045977,30.136748737122623,29.436790100655646,26.664932278396137,33.407198883777056,43.47635066628041,37.32688885293642,36.45560304990757,40.778236252895255,35.51051164087551,39.035776131045246,38.5483968341616,30.122453958759642,33.34610628473037,35.316140366482834,31.00186602870813,36.17447942631438,17.694050494376935,33.90501255712462,28.210840203473076,28.693532594692087,40.44921510724277,37.17318594551915,34.699649773382774,33.11161757446108,27.349073862627183,27.336001270446243,21.457239987251672,31.268573351278604,24.778281444582817,22.73715983465381,25.714619755244758,33.56442092407897,25.934549305718996,30.0681449569184,36.48147202722825,31.08969634936882,31.44799107142857,30.065727029438005,23.581530902797162,30.70492622560685,29.099756499882176,26.336466552315606,28.23280637254902,17.694050494376935,17.323174745661277,17.919791160757647
+207,MTR_237,,,t2_recon_gt,36.220313526590814,31.845161290322583,24.98369411288691,31.54729333701963,28.189144704614478,25.80468409586057,33.20250401284109,39.95662471595875,40.032059447983016,43.843668360933485,38.12156336909019,40.839946758534296,44.30430056957726,35.887732212470326,32.32626126592769,37.7281084201556,33.11804281345565,33.300070257611246,38.81945487231005,22.1484468151867,31.63284753573235,26.516010950332422,24.861079774375504,38.37059148319415,35.416570552595076,32.81362103101855,30.399387184495772,29.54729351418715,21.342012962256955,19.81043356207112,27.893478744714002,25.1404541015625,22.900023534949398,31.6165752171925,32.45852555404794,30.51226431413251,32.413791348600505,41.06491482421167,37.78965619883911,42.924899135446694,26.42654116673562,24.884433691462316,30.002564406980888,31.549730123997083,29.474475915094963,36.61911014788373,22.149089975466424,19.950347471842804,24.14785971027121
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neurips2021/recon-models/6x/U-Net_E1-oplus-E2/config.yaml

@@ -0,0 +1,240 @@
+AUG_TEST:
+  UNDERSAMPLE:
+    ACCELERATIONS:
+    - 6
+AUG_TRAIN:
+  NOISE_P: 0.2
+  UNDERSAMPLE:
+    ACCELERATIONS:
+    - 6
+    CALIBRATION_SIZE: 24
+    CENTER_FRACTIONS: []
+    NAME: PoissonDiskMaskFunc
+    PRECOMPUTE:
+      NUM: 100000
+      SEED: -1
+  USE_NOISE: false
+CUDNN_BENCHMARK: false
+DATALOADER:
+  ALT_SAMPLER:
+    PERIOD_SUPERVISED: 1
+    PERIOD_UNSUPERVISED: 1
+  DATA_KEYS: []
+  DROP_LAST: true
+  FILTER:
+    BY: []
+  GROUP_SAMPLER:
+    AS_BATCH_SAMPLER: true
+    BATCH_BY:
+    - num_coils
+    - matrix_shape
+  NUM_WORKERS: 8
+  PREFETCH_FACTOR: 2
+  SAMPLER_TRAIN: GroupSampler
+  SUBSAMPLE_TRAIN:
+    NUM_TOTAL: -1
+    NUM_TOTAL_BY_GROUP: []
+    NUM_UNDERSAMPLED: 0
+    NUM_VAL: -1
+    NUM_VAL_BY_GROUP: []
+    SEED: 1000
+DATASETS:
+  QDESS:
+    DATASET_TYPE: ''
+    ECHO_KIND: echo1-echo2-mc
+    KWARGS: []
+  TEST:
+  - stanford_qdess_v0.1.0_test
+  TRAIN:
+  - stanford_qdess_v0.1.0_train
+  VAL:
+  - stanford_qdess_v0.1.0_val
+DESCRIPTION:
+  BRIEF: Recon only unet baseline - 4 pooling layers, 32 channels, L1 loss, lr=1e-3,
+    echo=echo1-echo2-mc, acc=6
+  ENTITY_NAME: mtrecon
+  EXP_NAME: recon-baseline/unet-6x-echo1-echo2-mc/version_001
+  PROJECT_NAME: mtrecon
+  TAGS:
+  - neurips
+  - recon-baseline
+  - baseline
+  - unet
+  - unet_6x
+MODEL:
+  CASCADE:
+    ITFS:
+      PERIOD: 0
+    RECON_MODEL_NAME: ''
+    SEG_MODEL_NAME: ''
+    SEG_NORMALIZE: ''
+    USE_MAGNITUDE: false
+    ZERO_FILL: false
+  CS:
+    MAX_ITER: 200
+    REGULARIZATION: 0.005
+  DENOISING:
+    META_ARCHITECTURE: GeneralizedUnrolledCNN
+    NOISE:
+      STD_DEV:
+      - 1
+      USE_FULLY_SAMPLED_TARGET: true
+      USE_FULLY_SAMPLED_TARGET_EVAL: null
+  DEVICE: cpu
+  META_ARCHITECTURE: UnetModel
+  N2R:
+    META_ARCHITECTURE: GeneralizedUnrolledCNN
+    USE_SUPERVISED_CONSISTENCY: false
+  NORMALIZER:
+    KEYWORDS: []
+    NAME: TopMagnitudeNormalizer
+  PARAMETERS:
+    INIT: []
+    USE_COMPLEX_WEIGHTS: false
+  RECON_LOSS:
+    NAME: l1
+    RENORMALIZE_DATA: false
+    WEIGHT: 1.0
+  SEG:
+    ACTIVATION: sigmoid
+    CLASSES: []
+    INCLUDE_BACKGROUND: false
+    IN_CHANNELS: null
+    LOSS_NAME: DiceLoss
+    LOSS_WEIGHT: 1.0
+    MODEL:
+      DYNUNET_MONAI:
+        DEEP_SUPERVISION: false
+        DEEP_SUPR_NUM: 1
+        KERNEL_SIZE:
+        - 3
+        NORM_NAME: instance
+        RES_BLOCK: false
+        STRIDES:
+        - 1
+        UPSAMPLE_KERNEL_SIZE:
+        - 2
+      UNET_MONAI:
+        ACTIVATION:
+        - prelu
+        - {}
+        CHANNELS: []
+        DROPOUT: 0.0
+        KERNEL_SIZE:
+        - 3
+        NORM:
+        - instance
+        - {}
+        NUM_RES_UNITS: 0
+        STRIDES: []
+        UP_KERNEL_SIZE:
+        - 3
+      VNET_MONAI:
+        ACTIVATION:
+        - elu
+        - inplace: true
+        DROPOUT_DIM: 3
+        DROPOUT_PROB: 0.5
+    USE_MAGNITUDE: true
+  TASKS:
+  - recon
+  TB_RECON:
+    CHANNELS:
+    - 16
+    - 32
+    - 64
+    DEC_NUM_CONV_BLOCKS:
+    - 2
+    - 3
+    ENC_NUM_CONV_BLOCKS:
+    - 1
+    - 2
+    - 3
+    KERNEL_SIZE:
+    - 5
+    MULTI_CONCAT: []
+    ORDER:
+    - conv
+    - relu
+    STRIDES:
+    - 2
+    USE_MAGNITUDE: false
+  UNET:
+    BLOCK_ORDER:
+    - conv
+    - instancenorm
+    - - leakyrelu
+      - negative_slope: 0.2
+    - dropout
+    CHANNELS: 32
+    DROPOUT: 0.0
+    IN_CHANNELS: 4
+    NUM_POOL_LAYERS: 4
+    OUT_CHANNELS: 4
+  UNROLLED:
+    CONV_BLOCK:
+      ACTIVATION: relu
+      NORM: none
+      NORM_AFFINE: false
+      ORDER:
+      - norm
+      - act
+      - drop
+      - conv
+    DROPOUT: 0.0
+    FIX_STEP_SIZE: false
+    KERNEL_SIZE:
+    - 3
+    NUM_EMAPS: 1
+    NUM_FEATURES: 256
+    NUM_RESBLOCKS: 2
+    NUM_UNROLLED_STEPS: 5
+    PADDING: ''
+    SHARE_WEIGHTS: false
+  WEIGHTS: ''
+OUTPUT_DIR: results://skm-tea/neurips2021/6x/U-Net_E1-oplus-E2
+SEED: 1000
+SOLVER:
+  BASE_LR: 0.001
+  CHECKPOINT_MONITOR: val_loss
+  CHECKPOINT_PERIOD: 1
+  EARLY_STOPPING:
+    MIN_DELTA: 0.0
+    MONITOR: val_loss
+    PATIENCE: 0
+  GAMMA: 1.0
+  GRAD_ACCUM_ITERS: 1
+  LR_SCHEDULER_NAME: ''
+  MAX_ITER: 20
+  MIN_LR: null
+  MOMENTUM: 0.9
+  OPTIMIZER: Adam
+  STEPS: []
+  TEST_BATCH_SIZE: 16
+  TRAIN_BATCH_SIZE: 24
+  WARMUP_FACTOR: 0.001
+  WARMUP_ITERS: 1000
+  WARMUP_METHOD: linear
+  WEIGHT_DECAY: 0.0001
+  WEIGHT_DECAY_NORM: 0.0
+TEST:
+  EVAL_PERIOD: 1
+  EXPECTED_RESULTS: []
+  FLUSH_PERIOD: 1000
+  QDESS_EVALUATOR:
+    ADDITIONAL_PATHS: []
+  VAL_METRICS:
+    RECON:
+    - psnr
+    - psnr_scan
+    - psnr_mag
+    - psnr_mag_scan
+    - nrmse
+    - nrmse_scan
+    - nrmse_mag
+    - nrmse_mag_scan
+    - ssim (Wang)
+    SEM_SEG: []
+TIME_SCALE: epoch
+VERSION: 1
+VIS_PERIOD: -400

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+184,MTR_048,,,t2_recon_gt,33.38004575614666,27.522514050206066,21.430876446964326,24.12708275925416,26.386990425426905,25.010986091576807,30.015059872922777,42.9235488976407,32.73771059312255,35.47422709519552,41.77837811714672,42.63107309486781,42.274563180552036,35.29158682412359,27.150291851505955,29.731886011807916,34.163782912412685,33.84446090278319,36.034270256824826,23.046882410378018,30.429571724955544,22.848209804249624,23.928145896656538,37.11287772803581,35.96283793056127,30.61688380952381,30.252282397057762,31.0224109905911,22.900875118259222,21.608156831839228,26.462274337776282,31.102731339769253,26.08727672793166,34.94428369795342,33.090942857142856,33.740334286342645,37.510129268763265,46.84986945169713,39.756851790995725,39.4505149330587,27.51594202898551,27.341075604053,31.616282628262827,37.70227055122418,32.11051983782218,36.776591289782246,23.047055849069768,18.9969734919641,27.117101905261322
+185,MTR_052,,,t2_recon_gt,32.7966813781178,19.566987858932357,25.497423018126227,30.105573164289485,28.61531475101785,24.436790123456788,31.56959521946361,29.46345817290865,35.72077532662241,40.327682893414924,39.6195048994327,34.02127022168963,39.09965748324645,24.752027522935784,30.658845155709344,35.12450224215247,34.15377309528753,29.10866433021807,35.24565668328542,18.872110485384823,33.34132015120675,47.613725490196074,27.94955242966752,66.58125,36.12120669056153,52.14328358208956,32.17418159357628,25.76053968810233,20.091262683201805,21.250878208839993,20.312316715542522,26.374359899026327,24.012932047966142,28.28498823529412,27.081657963446474,28.524944665781323,28.546628470691935,30.535566546762592,27.76800748362956,32.27035024154589,23.330611010284333,24.63929271058872,24.051290774464675,28.2263758254953,25.627211796246648,30.030494578153927,18.872110485384823,18.425523883899515,19.058382193268184
+186,MTR_065,,,t2_recon_gt,28.170454545454547,24.784373337697943,18.37749674054759,24.539945683577947,21.87295423023578,19.204736106256554,27.320677682762167,33.94909973939825,23.126845806127577,30.75311342592592,30.85669445806768,27.629295117480417,35.16192384769539,29.448613455510007,20.79682742740182,27.6449658801758,26.553615781673226,23.515065688449067,31.293320429015672,19.373700142450144,29.464176514519174,23.39689767086674,22.08050785531604,37.22102702233035,33.84149924561264,30.633736638617236,28.371921328745593,25.221999865124587,20.248037383177568,17.90585214379553,25.570011189854537,18.731053294167015,20.22326708074534,24.22493415276558,30.917479108635096,30.290295774647888,33.622703180212014,29.126638176638178,31.357993593476998,28.035392051557462,24.878933051231677,23.588625347379306,29.256825075834175,23.14000724987917,25.34951065826518,25.938719806763284,19.373700142450144,18.87015078661127,19.744078563334824
+187,MTR_079,,,t2_recon_gt,33.766073658636266,29.294194335021572,22.27507451564829,24.755250948966683,28.123443650677938,23.74099033108702,28.223342415985467,44.61698541942814,36.20230055658627,34.77396737979242,45.94911042944785,37.473798494499135,40.405163572060125,36.91789905273575,29.25292805354155,29.75017440016912,36.809800403677954,30.647480337896884,34.39705183924011,19.42573113207547,29.031524926686213,20.339101680903827,24.797721387881925,31.931182356544824,36.2593522093522,26.99713816561107,31.066389019239796,30.801950508777292,23.770576848625627,19.816491375683636,29.0890701754386,26.389928360724824,22.71358836421598,31.118698652645413,34.883358778625954,32.69298675821481,40.126196172248804,34.708097395243485,39.89511077158135,41.61086769759451,28.571943711521552,25.761956521739126,34.25538447181784,29.939067407586375,30.25571205007825,35.66641221374046,19.42573113207547,20.1658908714766,19.000631219367296
+188,MTR_080,,,t2_recon_gt,32.74203598670057,32.12960135213894,21.668136225798925,25.148605678874382,30.572072750753332,28.492154954253458,30.68508641516447,42.95918683677119,27.559372003835094,33.15207097591889,39.52767330588628,38.711757269279396,34.86929504154872,37.485436807356756,24.5752630956604,29.154601507193423,34.97792612859097,33.40007083586318,32.795629245826134,19.61092715231788,31.13869569703849,24.97641580432738,26.412018917155905,35.83301067262348,36.091405670179604,30.752867896289125,31.479236925946072,27.353980369349003,21.443489965736664,20.925671467497082,25.385316671400172,25.888107992286265,24.16075975359343,24.10382626680455,30.269514285714283,31.389842909403917,33.270911086717895,36.27069885641678,30.622139502920632,29.520114513318394,25.515607698391772,25.895217169136433,29.132722259482822,30.637642408742153,27.214969411509934,26.56171486669679,19.61092715231788,19.026566340100327,20.15495690330669
+189,MTR_096,,,t2_recon_gt,29.586104053629093,22.231745413637935,19.248959160972507,25.679953060825348,24.274041314448862,20.126592726334792,23.838514392795794,35.35413843382795,32.61398244213887,40.13643634661152,34.91269944998094,31.798756449265774,33.45159927890806,28.823607969843835,25.91631759178147,32.9176133921944,29.667324627998784,25.888864942528734,28.67073139158576,19.459645342698927,28.176913940179244,21.790883167671506,22.27423798986366,33.291522728915226,34.02320989252881,27.885416108153652,28.435318282125277,27.408077020990998,22.842217898832686,20.7638517163993,28.41880971880972,21.938435737155057,21.623639146656462,25.675169578622814,33.06044404168554,30.15810602628002,34.78784319707138,37.20394537177542,33.78042817033224,25.269826973216404,27.563093992045214,25.258154859967046,31.426689237861982,28.7408841179951,27.092626703857693,25.486911052399826,19.459645342698927,19.59167164297942,19.30388878452001
+190,MTR_099,,,t2_recon_gt,29.939809928507852,27.07355252024658,19.279984383133783,24.49575175093298,27.533914338919928,21.135391887770663,23.213077603360606,36.350991129965294,26.927358725416976,33.81119673148532,38.935731555425306,36.83586888331242,31.804928020704157,31.81382293247158,23.187375922626625,29.1262829082682,33.28166974510528,28.875166228544924,27.562639882089638,17.38941623021244,32.4394771029555,25.39172897627619,27.67075731067233,39.44034633435831,35.78492537313433,32.87794403001164,32.049476469911404,26.29973862880651,22.595427242782407,19.787102643690464,28.83918613413715,22.946012269938652,20.15818788890575,21.79217477166132,30.4884882418813,29.361115786942406,33.81395089285714,35.01898480068827,30.991649159663865,27.709754655631098,26.256607105755247,24.295996602491506,31.116152431548837,28.395650485436896,25.18873262336395,24.485095507129408,17.38941623021244,17.451552555448412,17.33697574738213
+191,MTR_120,,,t2_recon_gt,38.60725704761214,34.96633135700486,28.302537562604343,32.00830555707338,39.90521608565088,27.57141041931385,32.5651769277971,46.6046015936255,42.985348047538196,39.97210326416029,43.81470988654781,42.32053746995849,44.76105759376921,40.795776521449945,35.58384544153548,35.975944715625516,41.866134226877904,34.834097020544256,38.65712603665405,22.643967595508546,35.03660957297044,28.81678661557155,28.04733933022651,40.74323899371068,40.88740810556079,35.1425229337664,34.914966980894285,32.401577591294455,22.71007814605228,22.789007694613773,31.187399256044635,26.198996655518396,27.10912154310946,36.64668969487622,32.6653756260434,34.939071956960326,38.21210292812778,41.62186079885195,41.896995820271684,45.11692755733528,27.1562630480167,28.51582228326906,34.46233970381402,33.15959628670121,34.07111671381134,40.3868831377592,22.643967595508546,20.837303370786515,24.948618593387042
+192,MTR_126,,,t2_recon_gt,35.46315425409269,33.19636302470751,23.38685540950455,32.24522998729352,29.51120803754061,25.103730249226256,30.72050878573302,41.22601351351351,34.25544678192044,42.48227366418266,37.41897977663749,39.53113018075589,41.327613521230546,37.22607991058955,28.740857787810388,37.26513526119403,33.459456364513024,31.90797382244037,35.886441742563605,19.077051621935603,33.96615169829344,27.249860659544822,24.715923762680607,42.62387572113713,39.81889613150064,35.35042666178355,32.574190813241906,28.56583702186695,21.327599410898383,21.62187119057294,28.72086228679722,27.426402321083174,26.85691843859092,26.74378860672615,25.822515359595226,32.71343859649123,35.88545971563981,38.15741873189572,31.133215350223548,29.606881635863154,23.346007789678676,26.77751440687181,31.976936331524083,32.02964241336463,28.82394173093402,28.078009895547005,19.077051621935603,18.656957686127477,19.603402456210993
+193,MTR_144,,,t2_recon_gt,31.319269939584707,26.788954193841953,21.52340054767239,31.027980616592863,29.644357995226734,27.321316614420063,24.056753972127325,36.41115797401619,30.393714580113343,36.09019353685245,35.28980708457148,36.84358464292819,31.788000660211264,31.616757992593154,25.886344058778818,33.4749519511089,32.48546446790841,31.63973480064947,27.894846233681108,21.506067566274282,32.160486248535996,32.29571696718048,25.54257382823083,37.06409712649772,33.566943513025535,34.76371319594984,29.653366807610997,28.566671766885975,27.952915578764145,25.58544471153846,30.66756667218817,26.375331294597352,22.444609665427507,21.293673965936737,32.32009679062659,29.270917593528818,33.729274047186934,32.19169435215947,31.641056765440915,29.951875901875905,29.96483219901431,27.38186298669295,32.12855287087555,28.992749018874978,26.916701388888892,25.54230837316339,21.506067566274282,28.2231953665772,18.065113249873363
+194,MTR_156,,,t2_recon_gt,34.899816616347984,31.415690376569042,21.087812769628993,26.205733135580214,32.038121431555496,24.061477682284448,30.115481566019948,42.63366994866617,32.56124667258207,36.866882243377475,41.6147972182056,40.2880400572246,44.26003009027081,37.007404376744084,26.74422572178478,31.504812366573212,36.85420864928499,32.04681075753309,37.149664513232395,19.48232442645074,34.67824012285866,26.48242783123612,28.744856487704595,40.80688368938623,41.593649873142446,33.957710139798266,35.44817336056274,30.27788458787515,24.911495285136954,21.243726561662918,27.411887125220456,23.948012552301254,24.20571302037201,26.32338041889917,38.548191144708426,32.36477957118767,38.580891719745225,43.36649544711651,39.50237965732934,36.79996887643946,31.103003187055656,26.479166430394105,32.47990366088632,32.249176564527396,31.070822653484683,30.92254406339664,19.48232442645074,18.314845767221836,20.89631415612318
+195,MTR_158,,,t2_recon_gt,36.322535242050044,30.23411354804127,21.482338591640918,27.62016638100414,29.444558931064282,24.007631484365643,32.271554704865395,44.063518107238366,39.45275244849713,42.316095989426294,47.04186485211885,38.90798417995303,48.48985507246377,37.10006300630063,30.29857509734073,35.01161326517891,38.1854016064257,31.340843270868824,40.298852295409176,24.50062746843189,35.617829367829366,28.15993308905528,26.941555217426124,43.056657081236516,43.19596060629375,35.989944830713426,35.2314040182075,35.681362382546865,34.13385949310805,25.002445797287198,31.869291081345963,29.95135887360838,24.782335985241556,32.71719635378172,45.33033980582524,47.27917658591233,36.88140740740741,49.611019816336395,45.492723043694966,47.135709482178875,38.86873235822427,34.64120819195347,34.2183127929179,37.891206324419294,33.2669411924857,38.81426133939996,24.50062746843189,21.171850421184903,27.550037304683336
+196,MTR_176,,,t2_recon_gt,34.68551179232102,29.860086262167048,23.22994413407821,30.647138853205654,29.579348458406052,23.895649570943924,27.156509034527996,43.27290295560608,35.346237864077665,43.304098560624546,40.99561352796647,37.31978313786236,37.523766521141084,36.478957625867416,29.03787085514834,36.83849228841621,35.30681842897017,30.261393933032434,32.3332069161167,18.77013444354852,27.628953710211867,21.660825109975033,21.89559646958337,31.778628106076425,33.89462422634836,27.047912613263662,28.107387742024077,32.68882038726908,26.688808337109197,24.76576151121606,35.50338552687262,25.265448504983386,24.571820809248553,28.50637254901961,35.416553287981856,35.07508917954816,45.26023612157749,42.38398093841642,38.717280977958886,35.67046467218332,30.56585243011836,29.505703872437355,39.964396462616286,32.99841033283656,31.140268340930593,31.623179174743836,18.77013444354852,19.73063326206751,17.612761248185777
+197,MTR_188,,,t2_recon_gt,34.11007043700839,26.571855450956573,23.71731866340668,27.936548059893735,29.8440771064359,23.05,25.52247908921933,42.34141357679648,38.06834061135371,41.99099062702004,46.60315959161741,36.5998023715415,36.41397639926383,34.36888991248272,30.64477234401349,34.9505404097435,38.070226349390595,29.78426028238183,31.159194081712716,22.219625427152753,29.140443642646606,20.214858461912282,22.5532204604497,33.15318050392399,39.661977038334314,27.208702204856266,30.75450771885639,30.9364359192148,27.15785744060025,21.179219600725954,31.017794432548182,27.90431623931624,21.574952760865,29.004232424677184,42.59395638629284,33.20923804328059,42.2396551724138,40.94615384615384,36.81853470437018,37.514103170847136,33.345404595404595,26.641449921558912,36.196517527675276,33.397823398466485,28.42778227204438,32.67314833707406,22.219625427152753,21.029220588851192,23.196706772086625
+198,MTR_196,,,t2_recon_gt,31.230066866497573,23.741434939503286,19.986222692036645,23.890075693860386,24.69995407225964,22.364500562972495,26.60778433687525,39.53499779379321,31.759979245935664,34.05943943524149,39.85769230769231,39.934351271046545,41.855126800250474,31.485867801377523,25.92719972067039,28.98210485790284,32.22480930734263,31.035633401221997,34.252527869367256,17.772381892398286,29.865666081217732,22.998109619686797,19.919479937233803,36.90672368033028,38.09233993503091,30.40104640820384,29.311497427565662,27.34485633745415,24.439306012563566,19.296895306859206,25.995318352059925,23.38743304491141,19.7547893205112,28.182738669238187,29.356615878107455,29.479747216370747,35.342475728155335,38.37918781725888,35.321048334421945,33.30486921529175,26.540346068185713,23.82185076223589,30.286375607779576,29.91460974758637,26.550809153774864,30.457308791994283,17.772381892398286,17.496586536629966,17.988307930921344
+199,MTR_198,,,t2_recon_gt,30.90165793015328,25.31937243658663,18.784525382147578,24.718258612164163,23.894893280632413,19.55945050901509,23.785130588046787,38.66595858281531,32.47372430900071,39.46346169636259,37.63477147805135,33.25386105059308,38.211063157894735,32.13708530574874,25.84491455725121,32.105059334060016,30.93168530659468,26.449183623735838,31.053027892671544,20.058566675687292,27.745408918874446,21.67278603125603,23.057099912981567,32.8497150633665,32.23590817210511,27.61262939022737,27.856286566262785,29.64168957509571,33.44375863657301,23.379037470521443,28.400527627143482,23.61943305402033,20.86202462678435,29.752058460271716,34.205827067669176,29.864640059679225,39.75195775792039,35.03824804856895,33.75049273220005,38.874374079528714,33.795598809819,26.51580751364272,33.78410386808445,28.771920555718616,26.911668112171146,33.912863860277646,20.058566675687292,18.374071961207775,21.13853910862636
+200,MTR_199,,,t2_recon_gt,30.084764674665912,26.738792694497157,20.023742090991263,22.46625028261361,32.32984591972608,27.98155570652174,27.808476901130255,37.42207675753228,24.0376316538571,29.579504860954103,36.31473714727484,34.72247191011236,33.912086092715235,32.05987793986305,22.087904524820615,26.023723927420722,34.30789107819167,31.274188495344177,30.902076002814916,19.51050761962275,29.776851983844143,26.395246096066415,23.591940407864207,33.734300595238096,33.02394290537948,30.176248203162437,29.384043355325165,25.573052593255564,26.476682393841568,25.09609375,26.40432820855615,22.583925686591275,20.557782740049916,21.989197299324836,27.469720873786407,28.86444157520981,26.596570537802027,30.953001765744556,25.134075917859366,27.445918367346938,26.923637853338793,26.843226578868606,26.49308204390068,26.582536557930258,22.907636758691204,24.724023949108144,19.51050761962275,19.918976933711708,19.120891171571348
+201,MTR_218,,,t2_recon_gt,38.06025853192115,29.57528059499662,23.796150348590484,30.509379296798272,32.0060820537428,24.548530741410488,32.980771602823275,46.049697863968525,36.62574165636588,45.037435742364686,49.294317873609984,41.41178276269185,49.284428258256135,37.65708574579542,30.149104820198925,37.67426723065439,40.12080601005921,32.79574910477071,41.00503967701518,22.483502385580493,32.14368221861781,25.2824668291362,24.918616452991454,37.580793045963325,39.37870517684494,31.82588697415104,32.4640143048726,34.04892697139635,33.414472640761296,36.108322580645165,36.81500701262272,29.58304848273457,23.710698013486425,30.375408229915088,40.93362979433019,47.209618104667605,46.23459214501511,38.22258965999068,34.02706219673577,40.936083333333336,36.54498958574404,39.58577758085954,40.681748656469615,33.28250897487036,28.378335495459535,35.0157634566093,22.483502385580493,25.850694183864913,20.44810320385597
+202,MTR_219,,,t2_recon_gt,30.613012917039207,27.633100233100233,20.968717304875497,26.277988482922957,29.266520984639115,23.701779910230616,24.9858087067048,36.03230727811182,32.31915897435898,35.57411776367962,34.58887549181368,33.497771891555004,33.28225260253355,31.87137487546418,26.700372902423865,30.92658381703626,31.944608359676856,28.583895014753846,29.160585877079452,19.644008714596954,28.81400193907691,22.06806672624367,22.09702837423313,34.20973798057302,35.01445201345175,28.731789266194784,28.897308093876255,27.788978018840993,23.398129781807878,20.23487333887043,26.307403859312984,24.99461137323069,22.33804593597525,28.079081410535483,28.14740596627756,27.89345577124259,36.275225294027805,37.931209987195906,34.39772541541814,32.198267390742174,25.61297444427642,23.848077872223747,31.017908185361627,30.646119423856803,27.961556049539535,29.961706654059807,19.644008714596954,19.88003856505845,19.405932169050608
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neurips2021/recon-models/6x/U-Net_E1/config.yaml

@@ -0,0 +1,241 @@
+AUG_TEST:
+  UNDERSAMPLE:
+    ACCELERATIONS:
+    - 6
+AUG_TRAIN:
+  NOISE_P: 0.2
+  UNDERSAMPLE:
+    ACCELERATIONS:
+    - 6
+    CALIBRATION_SIZE: 24
+    CENTER_FRACTIONS: []
+    NAME: PoissonDiskMaskFunc
+    PRECOMPUTE:
+      NUM: 100000
+      SEED: -1
+  USE_NOISE: false
+CUDNN_BENCHMARK: false
+DATALOADER:
+  ALT_SAMPLER:
+    PERIOD_SUPERVISED: 1
+    PERIOD_UNSUPERVISED: 1
+  DATA_KEYS: []
+  DROP_LAST: true
+  FILTER:
+    BY: []
+  GROUP_SAMPLER:
+    AS_BATCH_SAMPLER: true
+    BATCH_BY:
+    - num_coils
+    - matrix_shape
+  NUM_WORKERS: 8
+  PREFETCH_FACTOR: 2
+  SAMPLER_TRAIN: GroupSampler
+  SUBSAMPLE_TRAIN:
+    NUM_TOTAL: -1
+    NUM_TOTAL_BY_GROUP: []
+    NUM_UNDERSAMPLED: 0
+    NUM_VAL: -1
+    NUM_VAL_BY_GROUP: []
+    SEED: 1000
+DATASETS:
+  QDESS:
+    DATASET_TYPE: ''
+    ECHO_KIND: echo1
+    KWARGS: []
+  TEST:
+  - skmtea_v1_test
+  TRAIN:
+  - skmtea_v1_train
+  VAL:
+  - skmtea_v1_val
+DESCRIPTION:
+  BRIEF: Recon only unet baseline - 4 pooling layers, 32 channels, L1 loss, lr=1e-3,
+    echo=echo1, acc=6
+  ENTITY_NAME: mtrecon
+  EXP_NAME: recon-baseline/unet-6x-echo1/version_001
+  PROJECT_NAME: mtrecon
+  TAGS:
+  - baseline
+  - unet
+  - neurips
+  - recon-baseline
+  - unet_6x
+MODEL:
+  CASCADE:
+    ITFS:
+      PERIOD: 0
+    RECON_MODEL_NAME: ''
+    SEG_MODEL_NAME: ''
+    SEG_NORMALIZE: ''
+    USE_MAGNITUDE: false
+    ZERO_FILL: false
+  CS:
+    MAX_ITER: 200
+    REGULARIZATION: 0.005
+  DENOISING:
+    META_ARCHITECTURE: GeneralizedUnrolledCNN
+    NOISE:
+      STD_DEV:
+      - 1
+      USE_FULLY_SAMPLED_TARGET: true
+      USE_FULLY_SAMPLED_TARGET_EVAL: null
+  DEVICE: cpu
+  META_ARCHITECTURE: UnetModel
+  N2R:
+    META_ARCHITECTURE: GeneralizedUnrolledCNN
+    USE_SUPERVISED_CONSISTENCY: false
+  NORMALIZER:
+    KEYWORDS: []
+    NAME: TopMagnitudeNormalizer
+  PARAMETERS:
+    INIT: []
+    USE_COMPLEX_WEIGHTS: false
+  RECON_LOSS:
+    NAME: l1
+    RENORMALIZE_DATA: false
+    WEIGHT: 1.0
+  SEG:
+    ACTIVATION: sigmoid
+    CLASSES: []
+    INCLUDE_BACKGROUND: false
+    IN_CHANNELS: null
+    LOSS_NAME: DiceLoss
+    LOSS_WEIGHT: 1.0
+    MODEL:
+      DYNUNET_MONAI:
+        DEEP_SUPERVISION: false
+        DEEP_SUPR_NUM: 1
+        KERNEL_SIZE:
+        - 3
+        NORM_NAME: instance
+        RES_BLOCK: false
+        STRIDES:
+        - 1
+        UPSAMPLE_KERNEL_SIZE:
+        - 2
+      UNET_MONAI:
+        ACTIVATION:
+        - prelu
+        - {}
+        CHANNELS: []
+        DROPOUT: 0.0
+        KERNEL_SIZE:
+        - 3
+        NORM:
+        - instance
+        - {}
+        NUM_RES_UNITS: 0
+        STRIDES: []
+        UP_KERNEL_SIZE:
+        - 3
+      VNET_MONAI:
+        ACTIVATION:
+        - elu
+        - inplace: true
+        DROPOUT_DIM: 3
+        DROPOUT_PROB: 0.5
+    USE_MAGNITUDE: true
+  TASKS:
+  - recon
+  TB_RECON:
+    CHANNELS:
+    - 16
+    - 32
+    - 64
+    DEC_NUM_CONV_BLOCKS:
+    - 2
+    - 3
+    ENC_NUM_CONV_BLOCKS:
+    - 1
+    - 2
+    - 3
+    KERNEL_SIZE:
+    - 5
+    MULTI_CONCAT: []
+    ORDER:
+    - conv
+    - relu
+    STRIDES:
+    - 2
+    USE_MAGNITUDE: false
+  UNET:
+    BLOCK_ORDER:
+    - conv
+    - instancenorm
+    - - leakyrelu
+      - negative_slope: 0.2
+    - dropout
+    CHANNELS: 32
+    DROPOUT: 0.0
+    IN_CHANNELS: 2
+    NUM_POOL_LAYERS: 4
+    OUT_CHANNELS: 2
+  UNROLLED:
+    CONV_BLOCK:
+      ACTIVATION: relu
+      NORM: none
+      NORM_AFFINE: false
+      ORDER:
+      - norm
+      - act
+      - drop
+      - conv
+    DROPOUT: 0.0
+    FIX_STEP_SIZE: false
+    KERNEL_SIZE:
+    - 3
+    NUM_EMAPS: 1
+    NUM_FEATURES: 256
+    NUM_RESBLOCKS: 2
+    NUM_UNROLLED_STEPS: 5
+    PADDING: ''
+    SHARE_WEIGHTS: false
+  WEIGHTS: ''
+OUTPUT_DIR: results://skm-tea/neurips2021/6x/U-Net_E1
+SEED: 1000
+SOLVER:
+  BASE_LR: 0.001
+  CHECKPOINT_MONITOR: val_loss
+  CHECKPOINT_PERIOD: 1
+  EARLY_STOPPING:
+    MIN_DELTA: 0.0
+    MONITOR: val_loss
+    PATIENCE: 0
+  GAMMA: 1.0
+  GRAD_ACCUM_ITERS: 1
+  LR_SCHEDULER_NAME: ''
+  MAX_ITER: 20
+  MIN_LR: null
+  MOMENTUM: 0.9
+  OPTIMIZER: Adam
+  STEPS: []
+  TEST_BATCH_SIZE: 16
+  TRAIN_BATCH_SIZE: 24
+  WARMUP_FACTOR: 0.001
+  WARMUP_ITERS: 1000
+  WARMUP_METHOD: linear
+  WEIGHT_DECAY: 0.0001
+  WEIGHT_DECAY_NORM: 0.0
+TEST:
+  EVAL_PERIOD: 1
+  EXPECTED_RESULTS: []
+  FLUSH_PERIOD: 1000
+  QDESS_EVALUATOR:
+    ADDITIONAL_PATHS: []
+  VAL_METRICS:
+    RECON:
+    - psnr
+    - psnr_scan
+    - psnr_mag
+    - psnr_mag_scan
+    - nrmse
+    - nrmse_scan
+    - nrmse_mag
+    - nrmse_mag_scan
+    - ssim_old
+    - ssim (Wang)
+    SEM_SEG: []
+TIME_SCALE: epoch
+VERSION: 1
+VIS_PERIOD: -400

neurips2021/recon-models/6x/U-Net_E1/model-gpu.ckpt

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neurips2021/recon-models/6x/U-Net_E1/model-raw-gpu.ckpt

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neurips2021/recon-models/6x/U-Net_E1/model-raw.ckpt

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neurips2021/recon-models/6x/U-Net_E1/model.ckpt

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neurips2021/recon-models/6x/U-Net_E1/scan_metrics.csv

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+186,MTR_065,,t2_recon_gt,28.170453900160034,24.784373337697943,18.37749674054759,24.539945683577947,21.872943561293074,19.204736106256554,27.320677682762167,33.94909973939825,23.126845806127577,30.75311342592592,30.85669445806768,27.629295117480417,35.16192384769539,29.448613455510007,20.79682742740182,27.6449658801758,26.55361067102775,23.515065688449067,31.293320429015672,19.373700142450144,29.464176514519174,23.39689767086674,22.08050785531604,37.22102702233035,33.84149924561264,30.633736638617236,28.371921328745593,25.221999865124587,20.248037383177568,17.90585214379553,25.570011189854537,18.731053294167015,20.22326708074534,24.22493415276558,30.917479108635096,30.290295774647888,33.622703180212014,29.126638176638178,31.357993593476998,28.035392051557462,24.878933051231677,23.588625347379306,29.256825075834175,23.14000724987917,25.34951065826518,25.938719806763284,19.373700142450144,18.87015078661127,19.744078563334824
+187,MTR_079,,t2_recon_gt,33.766070252719054,29.294194335021572,22.27507451564829,24.755250948966683,28.123443650677938,23.74099033108702,28.223342415985467,44.61698541942814,36.20230055658627,34.77394619783944,45.949095092024535,37.473798494499135,40.405163572060125,36.91789905273575,29.25292805354155,29.750163830461894,36.80979292816028,30.647480337896884,34.39705183924011,19.42572641509434,29.031524926686213,20.339101680903827,24.797721387881925,31.931182356544824,36.2593522093522,26.99713816561107,31.066389019239796,30.801948158766717,23.770576848625627,19.816491375683636,29.0890701754386,26.389928360724824,22.71358836421598,31.118698652645413,34.88330788804071,32.69298675821481,40.126196172248804,34.708097395243485,39.89511077158135,41.61086769759451,28.571921723834652,25.761956521739126,34.25538447181784,29.939067407586375,30.25571205007825,35.66641221374046,19.42572641509434,20.165877941556765,19.000631219367296
+188,MTR_080,,t2_recon_gt,32.74203729056653,32.12960135213894,21.668136225798925,25.148605678874382,30.572072750753332,28.492154954253458,30.68508641516447,42.95919279837844,27.559372003835094,33.15207097591889,39.52767330588628,38.711757269279396,34.869299607341794,37.485439754774816,24.5752630956604,29.154601507193423,34.97792612859097,33.40007083586318,32.795631548647094,19.610930398649526,31.138697760809,24.97641580432738,26.412018917155905,35.83301067262348,36.09141309188066,30.752867896289125,31.479240811251845,27.35398298328389,21.443489965736664,20.925671467497082,25.385316671400172,25.888107992286265,24.16075975359343,24.10382626680455,30.269542857142856,31.389842909403917,33.270911086717895,36.27069885641678,30.622150956362386,29.520114513318394,25.51562088056947,25.895217169136433,29.132722259482822,30.637642408742153,27.21497482540198,26.56171486669679,19.610930398649526,19.026566340100327,20.154963171916627
+189,MTR_096,,t2_recon_gt,29.5861055510909,22.231745413637935,19.248959160972507,25.679953060825348,24.274041314448862,20.126592726334792,23.838514392795794,35.35413843382795,32.61398244213887,40.13644024813702,34.91269944998094,31.79876967852891,33.451604429564775,28.823607969843835,25.91631759178147,32.917615345548306,29.667324627998784,25.888871473354232,28.670733980582526,19.459645342698927,28.176917539502575,21.790883167671506,22.27423798986366,33.291522728915226,34.023222840864946,27.885416108153652,28.43532507214395,27.408077020990998,22.842217898832686,20.7638517163993,28.41880971880972,21.938435737155057,21.623639146656462,25.675169578622814,33.06044404168554,30.15810602628002,34.787827943868216,37.20394537177542,33.7804398689752,25.269826973216404,27.563093992045214,25.258154859967046,31.426682034289012,28.7408841179951,27.09263196673859,25.486911052399826,19.459645342698927,19.59167164297942,19.30388878452001
+190,MTR_099,,t2_recon_gt,29.939809928507852,27.07355252024658,19.279984383133783,24.49575175093298,27.533914338919928,21.135391887770663,23.213077603360606,36.350991129965294,26.927358725416976,33.81119673148532,38.935731555425306,36.83586888331242,31.804928020704157,31.81382293247158,23.187375922626625,29.1262829082682,33.28166974510528,28.875166228544924,27.562639882089638,17.38941623021244,32.4394771029555,25.39172897627619,27.67075731067233,39.44034633435831,35.78492537313433,32.87794403001164,32.049476469911404,26.29973862880651,22.595427242782407,19.787102643690464,28.83918613413715,22.946012269938652,20.15818788890575,21.79217477166132,30.4884882418813,29.361115786942406,33.81395089285714,35.01898480068827,30.991649159663865,27.709754655631098,26.256607105755247,24.295996602491506,31.116152431548837,28.395650485436896,25.18873262336395,24.485095507129408,17.38941623021244,17.451552555448412,17.33697574738213
+191,MTR_120,,t2_recon_gt,38.60725777230233,34.96633135700486,28.302537562604343,32.00830555707338,39.90521608565088,27.57141041931385,32.565166700756805,46.60460823373174,42.985348047538196,39.97210326416029,43.81471636952998,42.32053746995849,44.76105759376921,40.79577984702361,35.58384544153548,35.975944715625516,41.866137480074165,34.834097020544256,38.65712091737484,22.643965423625737,35.03660957297044,28.81678661557155,28.04733933022651,40.74323899371068,40.88740810556079,35.1425229337664,34.914966980894285,32.40158047011069,22.71007814605228,22.789007694613773,31.18741475511469,26.198996655518396,27.10912154310946,36.64671848013817,32.6653756260434,34.939071956960326,38.21210292812778,41.62186079885195,41.896995820271684,45.11692755733528,27.1562630480167,28.51582228326906,34.46234797716555,33.15959628670121,34.07111671381134,40.386899212345284,22.643965423625737,20.837299496319254,24.948618593387042
+192,MTR_126,,t2_recon_gt,35.463155436524126,33.19636302470751,23.38685540950455,32.24522998729352,29.51120803754061,25.103730249226256,30.72050878573302,41.2260098010098,34.25544678192044,42.4822842344485,37.41897977663749,39.53113018075589,41.32762273187805,37.22607804787184,28.740857787810388,37.265140443615266,33.459456364513024,31.90797382244037,35.88644622908161,19.077051621935603,33.96615169829344,27.249860659544822,24.715923762680607,42.62387572113713,39.81889613150064,35.35042666178355,32.574190813241906,28.56583702186695,21.327599410898383,21.62187119057294,28.72086228679722,27.426402321083174,26.85691843859092,26.74378860672615,25.822515359595226,32.71343859649123,35.88545971563981,38.15741873189572,31.133215350223548,29.606881635863154,23.346007789678676,26.77751440687181,31.976936331524083,32.02964241336463,28.82394173093402,28.078009895547005,19.077051621935603,18.656957686127477,19.603402456210993
+193,MTR_144,,t2_recon_gt,31.31927197035082,26.788954193841953,21.52340054767239,31.027980616592863,29.64436276849642,27.321316614420063,24.056753972127325,36.411161739785356,30.393714580113343,36.09019353685245,35.28981180133013,36.84358464292819,31.788006161971833,31.61675988209508,25.886344058778818,33.4749519511089,32.48546921342982,31.63973480064947,27.894848964876825,21.506067566274282,32.16048759473903,32.29571696718048,25.54257382823083,37.06410242816245,33.566943513025535,34.76371593996104,29.653366807610997,28.566671766885975,27.952915578764145,25.58544471153846,30.66756667218817,26.375331294597352,22.444609665427507,21.293673965936737,32.32009679062659,29.270917593528818,33.729274047186934,32.19169435215947,31.641056765440915,29.951875901875905,29.96483219901431,27.38186298669295,32.12855287087555,28.992749018874978,26.916701388888892,25.54230837316339,21.506067566274282,28.2231953665772,18.065113249873363
+194,MTR_156,,t2_recon_gt,34.899818852733986,31.415690376569042,21.087812769628993,26.205738249884924,32.038121431555496,24.061477682284448,30.115481566019948,42.63367415635782,32.56124667258207,36.866882243377475,41.614810989464985,40.2880400572246,44.26003009027081,37.00740647489562,26.74422572178478,31.50481493865583,36.854215574252976,32.04681075753309,37.149664513232395,19.482326585695006,34.67824012285866,26.48242783123612,28.744856487704595,40.80688368938623,41.593649873142446,33.957710139798266,35.44817336056274,30.27788458787515,24.911495285136954,21.243726561662918,27.411887125220456,23.948012552301254,24.20571302037201,26.32338041889917,38.548191144708426,32.36477957118767,38.580891719745225,43.36649544711651,39.50237965732934,36.79996887643946,31.103003187055656,26.479166430394105,32.47990366088632,32.249176564527396,31.070822653484683,30.92254406339664,19.482326585695006,18.314847738247757,20.896316543327764
+195,MTR_158,,t2_recon_gt,36.322536881215164,30.23411354804127,21.482338591640918,27.62016638100414,29.444558931064282,24.007631484365643,32.271554704865395,44.063518107238366,39.45275244849713,42.316100119780266,47.04187832648386,38.90798417995303,48.48985507246377,37.10006300630063,30.29857509734073,35.011615343057805,38.18540829986613,31.340843270868824,40.298852295409176,24.50062746843189,35.6178312928313,28.15993308905528,26.941555217426124,43.056657081236516,43.19596830037701,35.989944830713426,35.23140794223826,35.681362382546865,34.13385949310805,25.002445797287198,31.869291081345963,29.95135887360838,24.782335985241556,32.71719635378172,45.33033980582524,47.27917658591233,36.88140740740741,49.611019816336395,45.492723043694966,47.135709482178875,38.86873235822427,34.64120819195347,34.2183127929179,37.891206324419294,33.2669411924857,38.81426133939996,24.50062746843189,21.171850421184903,27.550037304683336
+196,MTR_176,,t2_recon_gt,34.68551109372381,29.860086262167048,23.22994413407821,30.647133014130564,29.579348458406052,23.895649570943924,27.156509034527996,43.27290295560608,35.346237864077665,43.304098560624546,40.99561352796647,37.31978313786236,37.523766521141084,36.478957625867416,29.03787085514834,36.83848930521166,35.30681842897017,30.261393933032434,32.3332069161167,18.77013279797265,27.628953710211867,21.660825109975033,21.89559646958337,31.778628106076425,33.89462422634836,27.047912613263662,28.107387742024077,32.688818161584685,26.688808337109197,24.76576151121606,35.50338552687262,25.265448504983386,24.571820809248553,28.50637254901961,35.416553287981856,35.07506936187079,45.26023612157749,42.38398093841642,38.717280977958886,35.67046467218332,30.56585243011836,29.505694760820045,39.964396462616286,32.99841033283656,31.140268340930593,31.623179174743836,18.77013279797265,19.730630250835613,17.612761248185777
+197,MTR_188,,t2_recon_gt,34.11006950283056,26.571849377467355,23.71731866340668,27.936548059893735,29.8440771064359,23.05,25.52247908921933,42.34141357679648,38.06834061135371,41.99099062702004,46.60315959161741,36.5998023715415,36.41397639926383,34.36888684170121,30.64477234401349,34.9505404097435,38.070226349390595,29.78426028238183,31.159194081712716,22.219625427152753,29.140441101737988,20.214858461912282,22.5532204604497,33.15318050392399,39.66196730881494,27.208702204856266,30.75450305489483,30.936431200453,27.15785744060025,21.179204476709018,31.017794432548182,27.904273504273505,21.574952760865,29.004232424677184,42.59395638629284,33.20923804328059,42.2396551724138,40.94615384615384,36.81853470437018,37.514103170847136,33.345404595404595,26.64144166460243,36.196517527675276,33.397798664358156,28.42778227204438,32.67314833707406,22.219625427152753,21.029220588851192,23.196706772086625
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+199,MTR_198,,t2_recon_gt,30.901659501154693,25.31937243658663,18.784525382147578,24.718258612164163,23.894901185770753,19.55945050901509,23.785130588046787,38.66596239655239,32.47372430900071,39.46346580178996,37.63477147805135,33.25386105059308,38.211063157894735,32.13708725381334,25.84491455725121,32.10506139069988,30.931689163131512,26.449183623735838,31.053027892671544,20.058566675687292,27.74541097581043,21.67278603125603,23.057107823748122,32.8497150633665,32.23590817210511,27.61262939022737,27.85629034084475,29.64168957509571,33.44375863657301,23.379037470521443,28.400527627143482,23.61943305402033,20.86202462678435,29.752058460271716,34.205827067669176,29.864640059679225,39.75195775792039,35.03824804856895,33.75049273220005,38.874374079528714,33.795598809819,26.51580751364272,33.78410386808445,28.771920555718616,26.911668112171146,33.912863860277646,20.058566675687292,18.374071961207775,21.13853910862636
+200,MTR_199,,t2_recon_gt,30.084763296277664,26.738792694497157,20.023742090991263,22.46625028261361,32.32983640859806,27.98155570652174,27.808476901130255,37.42207675753228,24.0376316538571,29.57949920868189,36.31473714727484,34.72247191011236,33.912086092715235,32.05987793986305,22.087904524820615,26.023721101124863,34.307886284098,31.274188495344177,30.902076002814916,19.510504067351068,29.776851983844143,26.395246096066415,23.591940407864207,33.734300595238096,33.02394290537948,30.176248203162437,29.384043355325165,25.573052593255564,26.476682393841568,25.09609375,26.40432820855615,22.583925686591275,20.557782740049916,21.989197299324836,27.469720873786407,28.86444157520981,26.596570537802027,30.953001765744556,25.134075917859366,27.445918367346938,26.923637853338793,26.843226578868606,26.49308204390068,26.582536557930258,22.907636758691204,24.724023949108144,19.510504067351068,19.918969657280073,19.120891171571348
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+206,MTR_235,,t2_recon_gt,35.27072782674098,33.452947561477714,23.29783908045977,30.136752714689152,29.436790100655646,26.664932278396137,33.407198883777056,43.47634704519119,37.32688885293642,36.45560690080099,40.778236252895255,35.51049769970724,39.035776131045246,38.54839315295417,30.122453958759642,33.346110198012056,35.316140366482834,31.001859193438136,36.17447942631438,17.69404860744207,33.90501255712462,28.210840203473076,28.693532594692087,40.44921510724277,37.17318594551915,34.699649773382774,33.11161757446108,27.349073862627183,27.336001270446243,21.457239987251672,31.268573351278604,24.778281444582817,22.73715983465381,25.714619755244758,33.56442092407897,25.934549305718996,30.0681449569184,36.48147202722825,31.08969634936882,31.44799107142857,30.065727029438005,23.581530902797162,30.70492622560685,29.099756499882176,26.336466552315606,28.23280637254902,17.69404860744207,17.323174745661277,17.91978812530354
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+245,MTR_241,,t2_recon_pred,35.87756103061397,29.797739753282933,24.132064421669106,31.82144491663943,30.560292428198437,23.03863636363636,28.928481062702616,43.886074925155754,38.1084052532833,44.76248953624645,40.9841397021058,37.377136324664185,42.201146335678715,36.78490490329829,31.03578049684835,38.21606832657788,35.81605986845513,29.87982527982528,35.564836120665795,19.602757294729702,28.695608382261685,24.934635345534005,18.967149758454106,37.33875,32.872749540722594,32.07120983644589,26.33504218040234,27.447102526002972,23.408379120879122,18.241034031413616,25.347774725274725,21.5477807486631,18.64343236903831,28.184953789279113,31.24937088076693,30.365473643260064,34.9459264352011,37.45630397236615,37.86377311960542,42.505202312138735,26.80485336101739,23.780156402737045,29.611177278973887,28.4890278824416,27.141794787918442,33.416447677146884,19.602757294729702,18.85200389542288,20.747321836455
+246,MTR_244,,t2_recon_pred,33.14637371719815,23.703861031014835,21.022794520547944,34.30240827845721,25.61223874460358,21.59177826222361,24.025886669384427,41.476965931004926,42.4135316418781,46.116509433962264,37.648447204968946,29.033891595615103,31.021619496855347,32.52412461015027,31.384263314027404,39.995490138739974,31.50709465365922,25.354882932840418,27.588978584295152,18.785406470096692,28.179315618924175,24.33337079914578,21.80952175786299,35.4607167814715,30.14681507179339,30.226498889711326,26.20991302578709,28.67198582971779,27.716641279512565,20.544881769641496,26.116982591876205,27.58029067706487,27.020577734501785,33.42932528222631,36.32409464027041,30.609845529723827,32.8161523309258,26.60437881873727,30.400476284977177,32.69531301212717,31.51183734298488,25.52068805924097,29.259862408871545,27.179728317659354,28.541094545129898,33.10287172011662,18.785056407807556,17.95860735648898,19.465477648083144
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+248,MTR_066,,t2_recon_pred,29.690113494152676,27.19245017884517,24.20385109114249,26.005448601525607,26.665178571428573,26.589693593314763,28.99988754568457,34.251817709685795,30.206862745098036,30.833464079273327,31.159937315634217,35.925771812080534,34.31639756010046,30.693872817473103,26.82856099342586,28.28089931194883,28.880817067635043,30.424352617079887,31.348834628190897,20.436278447121822,25.41559352721512,20.77595466434176,20.667659710052572,28.273139069189337,30.337007440066134,24.95961004932182,25.85274473586997,26.8631275368511,25.633668341708546,23.980538116591926,25.233830455259024,21.79294990723562,28.911111111111115,29.509565217391305,28.62876254180602,29.070677290836652,25.824696802646088,27.553684210526317,28.560815939278935,27.965486725663716,26.918507890961262,26.675949367088606,25.479550664832647,24.491518737672585,28.742367458866546,28.74429824561404,20.436278447121822,21.5642,18.153036437246964
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neurips2021/recon-models/6x/U-Net_E2/config.yaml

@@ -0,0 +1,241 @@
+AUG_TEST:
+  UNDERSAMPLE:
+    ACCELERATIONS:
+    - 6
+AUG_TRAIN:
+  NOISE_P: 0.2
+  UNDERSAMPLE:
+    ACCELERATIONS:
+    - 6
+    CALIBRATION_SIZE: 24
+    CENTER_FRACTIONS: []
+    NAME: PoissonDiskMaskFunc
+    PRECOMPUTE:
+      NUM: 100000
+      SEED: -1
+  USE_NOISE: false
+CUDNN_BENCHMARK: false
+DATALOADER:
+  ALT_SAMPLER:
+    PERIOD_SUPERVISED: 1
+    PERIOD_UNSUPERVISED: 1
+  DATA_KEYS: []
+  DROP_LAST: true
+  FILTER:
+    BY: []
+  GROUP_SAMPLER:
+    AS_BATCH_SAMPLER: true
+    BATCH_BY:
+    - num_coils
+    - matrix_shape
+  NUM_WORKERS: 8
+  PREFETCH_FACTOR: 2
+  SAMPLER_TRAIN: GroupSampler
+  SUBSAMPLE_TRAIN:
+    NUM_TOTAL: -1
+    NUM_TOTAL_BY_GROUP: []
+    NUM_UNDERSAMPLED: 0
+    NUM_VAL: -1
+    NUM_VAL_BY_GROUP: []
+    SEED: 1000
+DATASETS:
+  QDESS:
+    DATASET_TYPE: ''
+    ECHO_KIND: echo2
+    KWARGS: []
+  TEST:
+  - stanford_qdess_v0.1.0_test
+  TRAIN:
+  - stanford_qdess_v0.1.0_train
+  VAL:
+  - stanford_qdess_v0.1.0_val
+DESCRIPTION:
+  BRIEF: Recon only unet baseline - 4 pooling layers, 32 channels, L1 loss, lr=1e-3,
+    echo=echo2, acc=6
+  ENTITY_NAME: mtrecon
+  EXP_NAME: recon-baseline/unet-6x-echo2/version_001
+  PROJECT_NAME: mtrecon
+  TAGS:
+  - baseline
+  - unet
+  - neurips
+  - recon-baseline
+  - unet_6x
+MODEL:
+  CASCADE:
+    ITFS:
+      PERIOD: 0
+    RECON_MODEL_NAME: ''
+    SEG_MODEL_NAME: ''
+    SEG_NORMALIZE: ''
+    USE_MAGNITUDE: false
+    ZERO_FILL: false
+  CS:
+    MAX_ITER: 200
+    REGULARIZATION: 0.005
+  DENOISING:
+    META_ARCHITECTURE: GeneralizedUnrolledCNN
+    NOISE:
+      STD_DEV:
+      - 1
+      USE_FULLY_SAMPLED_TARGET: true
+      USE_FULLY_SAMPLED_TARGET_EVAL: null
+  DEVICE: cpu
+  META_ARCHITECTURE: UnetModel
+  N2R:
+    META_ARCHITECTURE: GeneralizedUnrolledCNN
+    USE_SUPERVISED_CONSISTENCY: false
+  NORMALIZER:
+    KEYWORDS: []
+    NAME: TopMagnitudeNormalizer
+  PARAMETERS:
+    INIT: []
+    USE_COMPLEX_WEIGHTS: false
+  RECON_LOSS:
+    NAME: l1
+    RENORMALIZE_DATA: false
+    WEIGHT: 1.0
+  SEG:
+    ACTIVATION: sigmoid
+    CLASSES: []
+    INCLUDE_BACKGROUND: false
+    IN_CHANNELS: null
+    LOSS_NAME: DiceLoss
+    LOSS_WEIGHT: 1.0
+    MODEL:
+      DYNUNET_MONAI:
+        DEEP_SUPERVISION: false
+        DEEP_SUPR_NUM: 1
+        KERNEL_SIZE:
+        - 3
+        NORM_NAME: instance
+        RES_BLOCK: false
+        STRIDES:
+        - 1
+        UPSAMPLE_KERNEL_SIZE:
+        - 2
+      UNET_MONAI:
+        ACTIVATION:
+        - prelu
+        - {}
+        CHANNELS: []
+        DROPOUT: 0.0
+        KERNEL_SIZE:
+        - 3
+        NORM:
+        - instance
+        - {}
+        NUM_RES_UNITS: 0
+        STRIDES: []
+        UP_KERNEL_SIZE:
+        - 3
+      VNET_MONAI:
+        ACTIVATION:
+        - elu
+        - inplace: true
+        DROPOUT_DIM: 3
+        DROPOUT_PROB: 0.5
+    USE_MAGNITUDE: true
+  TASKS:
+  - recon
+  TB_RECON:
+    CHANNELS:
+    - 16
+    - 32
+    - 64
+    DEC_NUM_CONV_BLOCKS:
+    - 2
+    - 3
+    ENC_NUM_CONV_BLOCKS:
+    - 1
+    - 2
+    - 3
+    KERNEL_SIZE:
+    - 5
+    MULTI_CONCAT: []
+    ORDER:
+    - conv
+    - relu
+    STRIDES:
+    - 2
+    USE_MAGNITUDE: false
+  UNET:
+    BLOCK_ORDER:
+    - conv
+    - instancenorm
+    - - leakyrelu
+      - negative_slope: 0.2
+    - dropout
+    CHANNELS: 32
+    DROPOUT: 0.0
+    IN_CHANNELS: 2
+    NUM_POOL_LAYERS: 4
+    OUT_CHANNELS: 2
+  UNROLLED:
+    CONV_BLOCK:
+      ACTIVATION: relu
+      NORM: none
+      NORM_AFFINE: false
+      ORDER:
+      - norm
+      - act
+      - drop
+      - conv
+    DROPOUT: 0.0
+    FIX_STEP_SIZE: false
+    KERNEL_SIZE:
+    - 3
+    NUM_EMAPS: 1
+    NUM_FEATURES: 256
+    NUM_RESBLOCKS: 2
+    NUM_UNROLLED_STEPS: 5
+    PADDING: ''
+    SHARE_WEIGHTS: false
+  WEIGHTS: ''
+OUTPUT_DIR: results://skm-tea/neurips2021/6x/U-Net_E2
+SEED: 1000
+SOLVER:
+  BASE_LR: 0.001
+  CHECKPOINT_MONITOR: val_loss
+  CHECKPOINT_PERIOD: 1
+  EARLY_STOPPING:
+    MIN_DELTA: 0.0
+    MONITOR: val_loss
+    PATIENCE: 0
+  GAMMA: 1.0
+  GRAD_ACCUM_ITERS: 1
+  LR_SCHEDULER_NAME: ''
+  MAX_ITER: 20
+  MIN_LR: null
+  MOMENTUM: 0.9
+  OPTIMIZER: Adam
+  STEPS: []
+  TEST_BATCH_SIZE: 16
+  TRAIN_BATCH_SIZE: 24
+  WARMUP_FACTOR: 0.001
+  WARMUP_ITERS: 1000
+  WARMUP_METHOD: linear
+  WEIGHT_DECAY: 0.0001
+  WEIGHT_DECAY_NORM: 0.0
+TEST:
+  EVAL_PERIOD: 1
+  EXPECTED_RESULTS: []
+  FLUSH_PERIOD: 1000
+  QDESS_EVALUATOR:
+    ADDITIONAL_PATHS: []
+  VAL_METRICS:
+    RECON:
+    - psnr
+    - psnr_scan
+    - psnr_mag
+    - psnr_mag_scan
+    - nrmse
+    - nrmse_scan
+    - nrmse_mag
+    - nrmse_mag_scan
+    - ssim_old
+    - ssim (Wang)
+    SEM_SEG: []
+TIME_SCALE: epoch
+VERSION: 1
+VIS_PERIOD: -400

neurips2021/recon-models/6x/U-Net_E2/model-gpu.ckpt

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neurips2021/recon-models/6x/U-Net_E2/model-raw-gpu.ckpt

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neurips2021/recon-models/6x/U-Net_E2/model-raw.ckpt

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neurips2021/recon-models/6x/U-Net_E2/model.ckpt

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neurips2021/recon-models/6x/U-Net_E2/scan_metrics.csv

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neurips2021/recon-models/6x/Unrolled_E1+E2/config.yaml

@@ -0,0 +1,239 @@
+AUG_TEST:
+  UNDERSAMPLE:
+    ACCELERATIONS:
+    - 6
+AUG_TRAIN:
+  NOISE_P: 0.2
+  UNDERSAMPLE:
+    ACCELERATIONS:
+    - 6
+    CALIBRATION_SIZE: 24
+    CENTER_FRACTIONS: []
+    NAME: PoissonDiskMaskFunc
+    PRECOMPUTE:
+      NUM: 100000
+      SEED: -1
+  USE_NOISE: false
+CUDNN_BENCHMARK: false
+DATALOADER:
+  ALT_SAMPLER:
+    PERIOD_SUPERVISED: 1
+    PERIOD_UNSUPERVISED: 1
+  DATA_KEYS: []
+  DROP_LAST: true
+  FILTER:
+    BY: []
+  GROUP_SAMPLER:
+    AS_BATCH_SAMPLER: true
+    BATCH_BY:
+    - num_coils
+    - matrix_shape
+  NUM_WORKERS: 8
+  PREFETCH_FACTOR: 2
+  SAMPLER_TRAIN: GroupSampler
+  SUBSAMPLE_TRAIN:
+    NUM_TOTAL: -1
+    NUM_TOTAL_BY_GROUP: []
+    NUM_UNDERSAMPLED: 0
+    NUM_VAL: -1
+    NUM_VAL_BY_GROUP: []
+    SEED: 1000
+DATASETS:
+  QDESS:
+    DATASET_TYPE: ''
+    ECHO_KIND: echo1+echo2
+    KWARGS: []
+  TEST:
+  - stanford_qdess_v0.1.0_test
+  TRAIN:
+  - stanford_qdess_v0.1.0_train
+  VAL:
+  - stanford_qdess_v0.1.0_val
+DESCRIPTION:
+  BRIEF: Recon only unrolled baseline - 8 unrolled, 2 resblocks, 256 features, L1
+    loss, lr=8e-4- echo=echo1+echo2, acc=6
+  ENTITY_NAME: mtrecon
+  EXP_NAME: recon-baseline/unrolled-6x-echo1+echo2/version_005
+  PROJECT_NAME: mtrecon
+  TAGS:
+  - unrolled
+  - baseline
+  - neurips
+  - unrolled_6x
+  - gcp
+  - recon-baseline
+MODEL:
+  CASCADE:
+    ITFS:
+      PERIOD: 0
+    RECON_MODEL_NAME: ''
+    SEG_MODEL_NAME: ''
+    SEG_NORMALIZE: ''
+    USE_MAGNITUDE: false
+    ZERO_FILL: false
+  CS:
+    MAX_ITER: 200
+    REGULARIZATION: 0.005
+  DENOISING:
+    META_ARCHITECTURE: GeneralizedUnrolledCNN
+    NOISE:
+      STD_DEV:
+      - 1
+      USE_FULLY_SAMPLED_TARGET: true
+      USE_FULLY_SAMPLED_TARGET_EVAL: null
+  DEVICE: cpu
+  META_ARCHITECTURE: GeneralizedUnrolledCNN
+  N2R:
+    META_ARCHITECTURE: GeneralizedUnrolledCNN
+    USE_SUPERVISED_CONSISTENCY: false
+  NORMALIZER:
+    KEYWORDS: []
+    NAME: TopMagnitudeNormalizer
+  PARAMETERS:
+    INIT: []
+    USE_COMPLEX_WEIGHTS: false
+  RECON_LOSS:
+    NAME: l1
+    RENORMALIZE_DATA: false
+    WEIGHT: 1.0
+  SEG:
+    ACTIVATION: sigmoid
+    CLASSES: []
+    INCLUDE_BACKGROUND: false
+    IN_CHANNELS: null
+    LOSS_NAME: DiceLoss
+    LOSS_WEIGHT: 1.0
+    MODEL:
+      DYNUNET_MONAI:
+        DEEP_SUPERVISION: false
+        DEEP_SUPR_NUM: 1
+        KERNEL_SIZE:
+        - 3
+        NORM_NAME: instance
+        RES_BLOCK: false
+        STRIDES:
+        - 1
+        UPSAMPLE_KERNEL_SIZE:
+        - 2
+      UNET_MONAI:
+        ACTIVATION:
+        - prelu
+        - {}
+        CHANNELS: []
+        DROPOUT: 0.0
+        KERNEL_SIZE:
+        - 3
+        NORM:
+        - instance
+        - {}
+        NUM_RES_UNITS: 0
+        STRIDES: []
+        UP_KERNEL_SIZE:
+        - 3
+      VNET_MONAI:
+        ACTIVATION:
+        - elu
+        - inplace: true
+        DROPOUT_DIM: 3
+        DROPOUT_PROB: 0.5
+    USE_MAGNITUDE: true
+  TASKS:
+  - recon
+  TB_RECON:
+    CHANNELS:
+    - 16
+    - 32
+    - 64
+    DEC_NUM_CONV_BLOCKS:
+    - 2
+    - 3
+    ENC_NUM_CONV_BLOCKS:
+    - 1
+    - 2
+    - 3
+    KERNEL_SIZE:
+    - 5
+    MULTI_CONCAT: []
+    ORDER:
+    - conv
+    - relu
+    STRIDES:
+    - 2
+    USE_MAGNITUDE: false
+  UNET:
+    BLOCK_ORDER:
+    - conv
+    - instancenorm
+    - - leakyrelu
+      - negative_slope: 0.2
+    - dropout
+    CHANNELS: 32
+    DROPOUT: 0.0
+    IN_CHANNELS: 2
+    NUM_POOL_LAYERS: 4
+    OUT_CHANNELS: 2
+  UNROLLED:
+    CONV_BLOCK:
+      ACTIVATION: relu
+      NORM: none
+      NORM_AFFINE: false
+      ORDER:
+      - act
+      - conv
+    DROPOUT: 0.0
+    FIX_STEP_SIZE: false
+    KERNEL_SIZE:
+    - 3
+    NUM_EMAPS: 1
+    NUM_FEATURES: 128
+    NUM_RESBLOCKS: 2
+    NUM_UNROLLED_STEPS: 8
+    PADDING: ''
+    SHARE_WEIGHTS: false
+  WEIGHTS: ''
+OUTPUT_DIR: results://skm-tea/neurips2021/6x/Unrolled_E1+E2
+SEED: 1000
+SOLVER:
+  BASE_LR: 0.0008
+  CHECKPOINT_MONITOR: val_loss
+  CHECKPOINT_PERIOD: 1
+  EARLY_STOPPING:
+    MIN_DELTA: 0.0
+    MONITOR: val_loss
+    PATIENCE: 0
+  GAMMA: 1.0
+  GRAD_ACCUM_ITERS: 6
+  LR_SCHEDULER_NAME: ''
+  MAX_ITER: 20
+  MIN_LR: null
+  MOMENTUM: 0.9
+  OPTIMIZER: Adam
+  STEPS: []
+  TEST_BATCH_SIZE: 8
+  TRAIN_BATCH_SIZE: 4
+  WARMUP_FACTOR: 0.001
+  WARMUP_ITERS: 1000
+  WARMUP_METHOD: linear
+  WEIGHT_DECAY: 0.0001
+  WEIGHT_DECAY_NORM: 0.0
+TEST:
+  EVAL_PERIOD: 1
+  EXPECTED_RESULTS: []
+  FLUSH_PERIOD: 1000
+  QDESS_EVALUATOR:
+    ADDITIONAL_PATHS: []
+  VAL_METRICS:
+    RECON:
+    - psnr
+    - psnr_scan
+    - psnr_mag
+    - psnr_mag_scan
+    - nrmse
+    - nrmse_scan
+    - nrmse_mag
+    - nrmse_mag_scan
+    - ssim (Wang)
+    SEM_SEG: []
+TIME_SCALE: epoch
+VERSION: 1
+VIS_PERIOD: -400

neurips2021/recon-models/6x/Unrolled_E1+E2/model-gpu.ckpt

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+oid sha256:2b9103e924dc78e28b190c57ae7b3ffba5c17109b1b01ef3d5a11cf54c31612b
+size 43117073

neurips2021/recon-models/6x/Unrolled_E1+E2/model-raw-gpu.ckpt

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+size 43117073

neurips2021/recon-models/6x/Unrolled_E1+E2/model-raw.ckpt

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+oid sha256:6aad0b6571910f30afdd6adf644c85acb2bd3891d26d0d0785199187a1dca953
+size 43102033

neurips2021/recon-models/6x/Unrolled_E1+E2/model.ckpt

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+version https://git-lfs.github.com/spec/v1
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+size 43102033

neurips2021/recon-models/6x/Unrolled_E1+E2/scan_metrics.csv

@@ -0,0 +1,254 @@
+,id,channel_0,channel_1,Metric,fc,fc/deep-lateral-anterior,fc/deep-lateral-central,fc/deep-lateral-posterior,fc/deep-medial-anterior,fc/deep-medial-central,fc/deep-medial-posterior,fc/superficial-lateral-anterior,fc/superficial-lateral-central,fc/superficial-lateral-posterior,fc/superficial-medial-anterior,fc/superficial-medial-central,fc/superficial-medial-posterior,fc/total-lateral-anterior,fc/total-lateral-central,fc/total-lateral-posterior,fc/total-medial-anterior,fc/total-medial-central,fc/total-medial-posterior,men,pc,pc/deep-lateral,pc/deep-medial,pc/superficial-lateral,pc/superficial-medial,pc/total-lateral,pc/total-medial,tc,tc/inferior-lateral-anterior,tc/inferior-lateral-central,tc/inferior-lateral-posterior,tc/inferior-medial-anterior,tc/inferior-medial-central,tc/inferior-medial-posterior,tc/superior-lateral-anterior,tc/superior-lateral-central,tc/superior-lateral-posterior,tc/superior-medial-anterior,tc/superior-medial-central,tc/superior-medial-posterior,tc/total-lateral-anterior,tc/total-lateral-central,tc/total-lateral-posterior,tc/total-medial-anterior,tc/total-medial-central,tc/total-medial-posterior,total,total-total-lateral,total-total-medial
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+179,MTR_223,0.812067,0.74749476,ssim (Wang)_scan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
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+181,MTR_006,,,t2_recon_gt,40.04454054956057,29.879695587872813,25.67926670992862,32.57818181818182,35.61708328901181,26.185839909808344,38.273704445334396,45.810166092134125,41.48685655456417,45.674300313552436,51.133289831430126,44.15154809737651,51.06379504504504,37.777838543285064,33.36226855713094,39.013065068493155,43.29017424975799,34.9572351719363,44.65358676889728,23.695051386893578,35.59087416571708,28.892792199235735,28.319042842814156,41.320452969724975,42.53042839983985,35.51404297235732,35.67710751796573,35.397207505263395,35.780591982015736,25.441424075531078,31.282301587301585,33.56471932943865,26.283621613347623,33.3322192513369,40.21808066759388,35.792618086873965,39.721761416589,49.74898648648648,48.16111481234732,41.08387307818122,37.76394529631165,30.132139399806388,35.16380197171024,40.096288441145276,35.21025733961581,36.818581727232605,23.695051386893578,22.82269705603039,24.033089024502438
+182,MTR_030,,,t2_recon_gt,40.07597837625671,35.62168752697454,25.304686704024455,34.94289541575709,43.492132428159586,28.770808254514186,33.04933817594834,45.36949399597418,33.93188067444876,47.31789381050161,50.32164206642067,39.73148379052369,43.20520909757887,40.58310665206486,29.578923017606993,41.176656322348656,46.92548520079671,34.34436225298531,38.10227134455486,20.968663093587196,34.66991417403127,29.217487169739595,29.862394845176304,38.713340898038574,39.364028225187916,34.34258967629046,34.97896084586156,35.534663875655646,27.43119221411192,31.559860199110354,37.27281380130874,32.660883084577115,29.033842750854614,31.14437821171634,35.89769470404985,41.454799604156364,45.14398589065256,34.986164488854726,43.18142028985507,39.652241918665275,31.143961748633878,36.123975807371906,40.873713086977574,33.70082502578205,34.82858838893505,34.89523043328354,20.212778660710452,19.77517707240294,21.04342088883356
+183,MTR_034,,,t2_recon_gt,31.40828923937929,29.06056824838899,21.34295051353875,26.870401756087603,27.440633955709945,23.5634954954955,26.559234543670264,38.950664627690855,32.668678231126314,36.54431579486654,37.57863277224321,35.576843631092586,32.905397201802224,33.995782336884744,26.877256446991403,31.699314683168822,32.53818550824769,29.553094786301614,29.786995321016832,17.75390150663368,28.254155325712212,22.560671764592005,21.667533104462972,33.25629598662208,33.95527495259438,28.2992956798708,28.207991925494333,27.553282574133227,26.310344827586206,22.64546288743883,28.267883880825057,24.53907734056988,22.098670977011494,24.249596431605777,34.00646882294098,31.204036948340747,31.586062840091273,34.03172133919513,29.436505759736697,30.855318078953985,29.72010636726252,26.685412068687086,29.812048684855412,28.76517615176152,25.51899130657121,27.27446171560161,17.75390150663368,19.02291854911579,16.95231358799788
+184,MTR_048,,,t2_recon_gt,33.380045171029685,27.522514050206066,21.430876446964326,24.12708275925416,26.386990425426905,25.010986091576807,30.015059872922777,42.92354521697523,32.73771059312255,35.47422709519552,41.77837811714672,42.63107309486781,42.274563180552036,35.29158496732026,27.150291851505955,29.731886011807916,34.163782912412685,33.84446090278319,36.034270256824826,23.04688066675966,30.429573577356255,22.848209804249624,23.92815349544073,37.11287772803581,35.96283793056127,30.61688380952381,30.25228600274032,31.022412553530682,22.900875118259222,21.608156831839228,26.462291209718238,31.102731339769253,26.08727672793166,34.94428369795342,33.090942857142856,33.740334286342645,37.510129268763265,46.84986945169713,39.756851790995725,39.4505149330587,27.51594202898551,27.341075604053,31.616291629162916,37.70227055122418,32.11051983782218,36.776591289782246,23.047054105421005,18.9969734919641,27.11709840936899
+185,MTR_052,,,t2_recon_gt,32.7966813781178,19.566987858932357,25.497423018126227,30.105573164289485,28.61531475101785,24.436790123456788,31.56959521946361,29.46345817290865,35.72077532662241,40.327682893414924,39.6195048994327,34.02127022168963,39.09965748324645,24.752027522935784,30.658845155709344,35.12450224215247,34.15377309528753,29.10866433021807,35.24565668328542,18.872110485384823,33.34132015120675,47.613725490196074,27.94955242966752,66.58125,36.12120669056153,52.14328358208956,32.17418159357628,25.760542608492493,20.091262683201805,21.250878208839993,20.312316715542522,26.374359899026327,24.012932047966142,28.28498823529412,27.081657963446474,28.524944665781323,28.546628470691935,30.535611510791366,27.76800748362956,32.27035024154589,23.330611010284333,24.63929271058872,24.051290774464675,28.226395837502498,25.627211796246648,30.030494578153927,18.872110485384823,18.425523883899515,19.058382193268184
+186,MTR_065,,,t2_recon_gt,28.170455836043573,24.784373337697943,18.37749674054759,24.539945683577947,21.87295423023578,19.204736106256554,27.320684112389895,33.94909973939825,23.126845806127577,30.753119212962964,30.85669445806768,27.629295117480417,35.16192384769539,29.448613455510007,20.79682742740182,27.64496877168633,26.553615781673226,23.515065688449067,31.293323602208545,19.373702120924346,29.464178711066204,23.39689767086674,22.08050785531604,37.22102702233035,33.841507186532205,30.633736638617236,28.3719255766535,25.221999865124587,20.248037383177568,17.90585214379553,25.570011189854537,18.731053294167015,20.22326708074534,24.22493415276558,30.917479108635096,30.290295774647888,33.622703180212014,29.126638176638178,31.357993593476998,28.035392051557462,24.878933051231677,23.588625347379306,29.256825075834175,23.14000724987917,25.34951065826518,25.938719806763284,19.373702120924346,18.870155454927406,19.744078563334824
+187,MTR_079,,,t2_recon_gt,33.76607252333053,29.294194335021572,22.27507451564829,24.755250948966683,28.123443650677938,23.74099033108702,28.223342415985467,44.61698541942814,36.20230055658627,34.77395678881593,45.94911042944785,37.473798494499135,40.405163572060125,36.91789905273575,29.25292805354155,29.750169115315508,36.809800403677954,30.647480337896884,34.39705183924011,19.42573113207547,29.031524926686213,20.339101680903827,24.797721387881925,31.931182356544824,36.2593522093522,26.99713816561107,31.066389019239796,30.801948158766717,23.770576848625627,19.816491375683636,29.0890701754386,26.389928360724824,22.71358836421598,31.118698652645413,34.88330788804071,32.69298675821481,40.126196172248804,34.708097395243485,39.89511077158135,41.61086769759451,28.571921723834652,25.761956521739126,34.25538447181784,29.939067407586375,30.25571205007825,35.66641221374046,19.42573113207547,20.1658908714766,19.000631219367296
+188,MTR_080,,,t2_recon_gt,32.74203598670057,32.12960135213894,21.668136225798925,25.148605678874382,30.572072750753332,28.492154954253458,30.68508641516447,42.95918683677119,27.559372003835094,33.15207097591889,39.52767330588628,38.711757269279396,34.86929504154872,37.485436807356756,24.5752630956604,29.154601507193423,34.97792612859097,33.40007083586318,32.795629245826134,19.61092715231788,31.138697760809,24.97641580432738,26.412018917155905,35.83301067262348,36.09141309188066,30.752867896289125,31.479240811251845,27.353981676316447,21.443489965736664,20.925671467497082,25.385316671400172,25.888107992286265,24.16075975359343,24.10382626680455,30.269542857142856,31.389842909403917,33.270911086717895,36.27069885641678,30.622139502920632,29.520114513318394,25.51562088056947,25.895217169136433,29.132722259482822,30.637642408742153,27.214969411509934,26.56171486669679,19.61092715231788,19.026566340100327,20.15495690330669
+189,MTR_096,,,t2_recon_gt,29.586105051936965,22.231745413637935,19.248959160972507,25.679953060825348,24.274041314448862,20.126592726334792,23.838514392795794,35.35413843382795,32.61398244213887,40.13644024813702,34.91269944998094,31.79876967852891,33.45159927890806,28.823607969843835,25.91631759178147,32.917615345548306,29.667324627998784,25.888871473354232,28.67073139158576,19.459645342698927,28.176913940179244,21.790875020368254,22.27423798986366,33.291529955915294,34.02320989252881,27.885416108153652,28.435318282125277,27.408077020990998,22.842217898832686,20.7638517163993,28.41880971880972,21.938435737155057,21.623639146656462,25.675169578622814,33.06044404168554,30.15810602628002,34.78784319707138,37.20394537177542,33.78042817033224,25.269826973216404,27.563093992045214,25.258154859967046,31.426689237861982,28.7408841179951,27.092626703857693,25.486911052399826,19.459645342698927,19.59167164297942,19.30388878452001
+190,MTR_099,,,t2_recon_gt,29.939810502741974,27.07355654941778,19.279984383133783,24.49575175093298,27.533914338919928,21.135391887770663,23.213077603360606,36.350991129965294,26.927358725416976,33.81119673148532,38.935731555425306,36.83586888331242,31.804928020704157,31.813824902953755,23.187375922626625,29.1262829082682,33.28166974510528,28.875166228544924,27.562639882089638,17.38941623021244,32.4394771029555,25.39172897627619,27.67075731067233,39.44034633435831,35.78492537313433,32.87794403001164,32.049476469911404,26.29973862880651,22.595427242782407,19.787102643690464,28.83918613413715,22.946012269938652,20.15818788890575,21.79217477166132,30.4884882418813,29.361115786942406,33.81395089285714,35.01898480068827,30.991649159663865,27.709754655631098,26.256607105755247,24.295996602491506,31.116152431548837,28.395650485436896,25.18873262336395,24.485095507129408,17.38941623021244,17.451552555448412,17.33697574738213
+191,MTR_120,,,t2_recon_gt,38.607257772302326,34.96633801878623,28.302537562604343,32.00830009289109,39.90521608565088,27.57141041931385,32.5651769277971,46.6046015936255,42.98536502546689,39.97210326416029,43.81470988654781,42.32053746995849,44.76105759376921,40.79577984702361,35.5838538597525,35.97594197334503,41.866134226877904,34.834097020544256,38.65712603665405,22.643967595508546,35.03660957297044,28.81678661557155,28.04733933022651,40.74323899371068,40.88740810556079,35.1425229337664,34.914966980894285,32.401577591294455,22.71007814605228,22.789007694613773,31.187399256044635,26.198996655518396,27.10912154310946,36.64668969487622,32.6653756260434,34.939071956960326,38.21210292812778,41.62186079885195,41.896995820271684,45.11692755733528,27.1562630480167,28.51582228326906,34.46233970381402,33.15959628670121,34.07111671381134,40.3868831377592,22.643967595508546,20.837303370786515,24.948618593387042
+192,MTR_126,,,t2_recon_gt,35.46315425409269,33.19636676260606,23.38685540950455,32.24522998729352,29.51120803754061,25.103730249226256,30.72050878573302,41.22601351351351,34.25544678192044,42.48227366418266,37.41897373981286,39.53113018075589,41.327613521230546,37.22608177330726,28.740857787810388,37.26513526119403,33.459453351012534,31.90797382244037,35.886441742563605,19.077051621935603,33.96615353527931,27.249860659544822,24.715923762680607,42.62388267185654,39.81889613150064,35.35043032411646,32.574190813241906,28.56583702186695,21.327599410898383,21.62187119057294,28.72086228679722,27.426402321083174,26.85691843859092,26.74378860672615,25.822515359595226,32.71343859649123,35.88545971563981,38.15741873189572,31.133215350223548,29.606881635863154,23.346007789678676,26.77751440687181,31.976936331524083,32.02964241336463,28.82394173093402,28.078009895547005,19.077051621935603,18.656957686127477,19.603402456210993
+193,MTR_144,,,t2_recon_gt,31.319269939584707,26.788954193841953,21.52340054767239,31.027980616592863,29.644357995226734,27.321316614420063,24.056753972127325,36.41115797401619,30.393714580113343,36.09019353685245,35.28980708457148,36.84358464292819,31.788000660211264,31.616757992593154,25.886344058778818,33.4749519511089,32.48546446790841,31.63973480064947,27.894846233681108,21.50606278112738,32.160486248535996,32.29571696718048,25.54257382823083,37.06409712649772,33.566943513025535,34.76371319594984,29.653366807610997,28.566671766885975,27.952915578764145,25.58544471153846,30.66756667218817,26.375331294597352,22.444609665427507,21.293673965936737,32.32009679062659,29.270917593528818,33.729274047186934,32.19169435215947,31.641056765440915,29.951875901875905,29.96483219901431,27.38186298669295,32.12855287087555,28.992749018874978,26.916701388888892,25.54230837316339,21.50606278112738,28.2231953665772,18.06510601345973
+194,MTR_156,,,t2_recon_gt,34.89981717544448,31.415690376569042,21.087812769628993,26.205733135580214,32.038121431555496,24.061477682284448,30.115481566019948,42.63366994866617,32.56124667258207,36.866882243377475,41.6148041038353,40.2880400572246,44.26003009027081,37.007404376744084,26.74422572178478,31.504812366573212,36.85421211176898,32.04681075753309,37.149664513232395,19.482325506072875,34.67824012285866,26.48242783123612,28.744856487704595,40.80688368938623,41.593649873142446,33.957710139798266,35.44817336056274,30.27788458787515,24.911495285136954,21.243726561662918,27.411887125220456,23.948012552301254,24.20571302037201,26.32338041889917,38.548191144708426,32.36477957118767,38.580891719745225,43.36649544711651,39.50237965732934,36.79996887643946,31.103003187055656,26.479166430394105,32.47990366088632,32.249176564527396,31.070822653484683,30.92254406339664,19.482325506072875,18.314847738247757,20.89631415612318
+195,MTR_158,,,t2_recon_gt,36.3225341492733,30.23411354804127,21.482338591640918,27.62016638100414,29.444558931064282,24.007631484365643,32.271554704865395,44.06351357476318,39.45275244849713,42.316095989426294,47.04185811493634,38.90798417995303,48.48985507246377,37.100060756075614,30.29857509734073,35.01161326517891,38.18539825970549,31.340843270868824,40.298852295409176,24.50062746843189,35.617829367829366,28.15993308905528,26.941555217426124,43.056657081236516,43.19596060629375,35.989944830713426,35.2314040182075,35.681362382546865,34.13385949310805,25.002445797287198,31.869291081345963,29.95135887360838,24.782335985241556,32.71719635378172,45.33033980582524,47.27917658591233,36.88140740740741,49.611019816336395,45.492723043694966,47.135709482178875,38.86873235822427,34.64120819195347,34.2183127929179,37.891206324419294,33.2669411924857,38.81426133939996,24.50062746843189,21.171850421184903,27.550037304683336
+196,MTR_176,,,t2_recon_gt,34.685512490918235,29.860086262167048,23.22994413407821,30.647138853205654,29.579348458406052,23.895649570943924,27.156509034527996,43.27290295560608,35.346237864077665,43.304098560624546,40.995620754444275,37.31978313786236,37.523766521141084,36.478957625867416,29.03787085514834,36.83849228841621,35.30682205386595,30.261393933032434,32.3332069161167,18.77013444354852,27.628953710211867,21.660825109975033,21.89559646958337,31.778628106076425,33.89462422634836,27.047912613263662,28.107387742024077,32.68882038726908,26.688808337109197,24.76576151121606,35.50338552687262,25.265448504983386,24.571820809248553,28.50637254901961,35.416553287981856,35.07508917954816,45.26023612157749,42.38398093841642,38.717280977958886,35.67046467218332,30.56585243011836,29.505703872437355,39.964396462616286,32.99841033283656,31.140268340930593,31.623179174743836,18.77013444354852,19.73063326206751,17.612761248185777
+197,MTR_188,,,t2_recon_gt,34.110071371186216,26.571855450956573,23.71735941320293,27.936548059893735,29.8440771064359,23.05,25.52247908921933,42.34141357679648,38.06834061135371,41.99099062702004,46.60315959161741,36.5998023715415,36.41397639926383,34.36888991248272,30.6447934232715,34.9505404097435,38.070226349390595,29.78426028238183,31.159194081712716,22.219625427152753,29.140443642646606,20.214858461912282,22.5532204604497,33.15318050392399,39.661977038334314,27.208702204856266,30.75450771885639,30.9364335598339,27.15785744060025,21.179204476709018,31.017794432548182,27.90431623931624,21.574952760865,29.004232424677184,42.59395638629284,33.20923804328059,42.2396551724138,40.94615384615384,36.81853470437018,37.514103170847136,33.345404595404595,26.64144166460243,36.196517527675276,33.397823398466485,28.42778227204438,32.67314833707406,22.219625427152753,21.029220588851192,23.196706772086625
+198,MTR_196,,,t2_recon_gt,31.230065979674002,23.741434939503286,19.986222692036645,23.890075693860386,24.69995407225964,22.364500562972495,26.60778433687525,39.53500514781585,31.759979245935664,34.05943244565597,39.85769230769231,39.934351271046545,41.85511897307452,31.485871407450144,25.92719972067039,28.982101357972844,32.22480930734263,31.035633401221997,34.25252394410426,17.772381892398286,29.865666081217732,22.998109619686797,19.919479937233803,36.906713850388286,38.09235041391595,30.40104117616282,29.311502843216893,27.34485633745415,24.439306012563566,19.296895306859206,25.995318352059925,23.38743304491141,19.754776667088446,28.182738669238187,29.356615878107455,29.479747216370747,35.34249779346867,38.37918781725888,35.321048334421945,33.30486921529175,26.540346068185713,23.82185076223589,30.286385737439222,29.91460974758637,26.550802024666716,30.457308791994283,17.772381892398286,17.496586536629966,17.988307930921344
+199,MTR_198,,,t2_recon_gt,30.90165845382042,25.31937243658663,18.784525382147578,24.71826273281688,23.894893280632413,19.55945050901509,23.785130588046787,38.66595858281531,32.47372430900071,39.46346169636259,37.63477147805135,33.25386105059308,38.211063157894735,32.13708530574874,25.84491455725121,32.10506139069988,30.93168530659468,26.449183623735838,31.053027892671544,20.058565083812223,27.745408918874446,21.67278603125603,23.057099912981567,32.8497150633665,32.23590817210511,27.61262939022737,27.856286566262785,29.641690830352097,33.443781667434365,23.379037470521443,28.400527627143482,23.61943305402033,20.86202462678435,29.752058460271716,34.205827067669176,29.864640059679225,39.75195775792039,35.03824804856895,33.75049273220005,38.874374079528714,33.79561120753782,26.51580751364272,33.78410386808445,28.771920555718616,26.911668112171146,33.912863860277646,20.058565083812223,18.374071961207775,21.138536496159674
+200,MTR_199,,,t2_recon_gt,30.084764674665912,26.738792694497157,20.023742090991263,22.46625028261361,32.32984591972608,27.98155570652174,27.808476901130255,37.42207675753228,24.0376316538571,29.579504860954103,36.31473714727484,34.72247191011236,33.912086092715235,32.05987793986305,22.087904524820615,26.023723927420722,34.30789107819167,31.274188495344177,30.902076002814916,19.51050761962275,29.776851983844143,26.395246096066415,23.591940407864207,33.734300595238096,33.02394290537948,30.176248203162437,29.384043355325165,25.573052593255564,26.476682393841568,25.09609375,26.40432820855615,22.583925686591275,20.557782740049916,21.989197299324836,27.469720873786407,28.86444157520981,26.596570537802027,30.953001765744556,25.134075917859366,27.445918367346938,26.923637853338793,26.843226578868606,26.49308204390068,26.582536557930258,22.907636758691204,24.724023949108144,19.51050761962275,19.918976933711708,19.120891171571348
+201,MTR_218,,,t2_recon_gt,38.06025853192116,29.57528059499662,23.796150348590484,30.509379296798272,32.0060820537428,24.548530741410488,32.98076475022271,46.049697863968525,36.62574165636588,45.03744582199375,49.294317873609984,41.41178276269185,49.284428258256135,37.65708574579542,30.149104820198925,37.67427220701667,40.12080601005921,32.79574910477071,41.005036196575254,22.483502385580493,32.14368221861781,25.2824668291362,24.918616452991454,37.580793045963325,39.37870517684494,31.82588697415104,32.4640143048726,34.04892697139635,33.414472640761296,36.108322580645165,36.81500701262272,29.58304848273457,23.710698013486425,30.375408229915088,40.93362979433019,47.209618104667605,46.23459214501511,38.22258965999068,34.02706219673577,40.936083333333336,36.54498958574404,39.58577758085954,40.681748656469615,33.28250897487036,28.378335495459535,35.0157634566093,22.483502385580493,25.850694183864913,20.44810320385597
+202,MTR_219,,,t2_recon_gt,30.61301232883159,27.633100233100233,20.968717304875497,26.277988482922957,29.266520984639115,23.701779910230616,24.9858087067048,36.03230727811182,32.31915897435898,35.57411776367962,34.58887549181368,33.497771891555004,33.28224633136836,31.87137487546418,26.700372902423865,30.92658381703626,31.944608359676856,28.583895014753846,29.16058272041415,19.644008714596954,28.814006448558093,22.06806672624367,22.097037960122698,34.209746143171984,35.01445201345175,28.7317937460801,28.897312633346953,27.788978018840993,23.398129781807878,20.23487333887043,26.307403859312984,24.99461137323069,22.33804593597525,28.079081410535483,28.14740596627756,27.89345577124259,36.275225294027805,37.931209987195906,34.39772541541814,32.198267390742174,25.61297444427642,23.848077872223747,31.017908185361627,30.646119423856803,27.961556049539535,29.961706654059807,19.644008714596954,19.88003856505845,19.405932169050608
+203,MTR_221,,,t2_recon_gt,36.35991142573187,26.307704875179713,24.481664145234493,28.704881505839666,23.915501181704435,29.76,32.805867775201854,46.832333137216445,43.68552155314248,44.6595205108126,39.03515244326883,41.07234544596508,46.81073820022865,36.56587566189449,33.685556606748655,36.43980781026375,31.470839131644865,35.143660694034935,39.735416750838354,21.3944489049467,31.683406657867717,30.410292269013194,22.194995203070036,41.33278955954323,31.19884963023829,36.26640670553936,27.044961640601947,30.640962467693004,28.795477093667934,20.851336606655757,29.054173329069393,23.119207836456557,22.981718924972004,27.688421491045396,42.711644951140066,36.581596162232884,40.88589058000823,36.07505112474438,34.11741854636592,40.79284199363733,34.60511643719191,28.0044323252355,34.22921914357683,28.101179554390562,27.450184378142808,33.45351061348262,21.3944489049467,20.27813680008631,22.181300380228134
+204,MTR_224,,,t2_recon_gt,31.952338353048606,27.031989210125882,20.346442400774443,27.152731179814225,27.25605445738971,21.663912087912088,28.281823469536135,37.288931457230426,32.28562544845731,35.868850792790354,40.63639396770319,35.11199110122358,39.53039173789173,32.143205720037486,26.351220979189222,31.561051333013502,33.87749355542336,28.348545836558664,33.965543920256216,19.112402976897087,30.32164283094976,22.74185080578169,24.520601319220738,33.55506001091108,38.39358108108108,28.680166279679426,31.896134779797404,32.610492815121994,30.457046332046332,25.083621127475872,29.89090598290598,27.61968592260235,27.721789419969383,31.376536312849158,35.37654090399701,39.78640747438215,37.25860082304526,36.63716265499635,38.03414584186809,38.385330261136716,32.733535004321524,31.80686328555678,33.23422969187675,31.539457831325304,32.40025090604963,34.41582014987511,19.112213775312192,17.848508988367993,19.717442096022687
+205,MTR_227,,,t2_recon_gt,32.546622957017895,26.294364368263864,22.781086587436334,30.683191239734064,27.591961102106968,25.669230769230772,30.726244472971047,36.13547058823529,33.276468468468465,38.35725506072875,37.0797513321492,35.71900164822227,37.329835479256076,31.198390669794104,27.874217246807767,34.45645321765432,32.274696023660866,30.660843655059594,34.023878571428575,21.53051527427151,32.75368757687577,24.961802265705458,25.530054984956948,39.54762079062958,39.602593270992,32.68511968213974,32.82440035978413,28.70413821083238,25.161235059760962,23.51081282624907,31.568581851345186,23.94675675675676,21.505150525933985,25.522583479789105,29.123718309859157,29.45569253081943,37.518161434977586,31.804111548087235,36.62185615848407,37.685921787709496,26.80263710618436,26.194059405940592,34.04255460841769,27.533670638158966,28.416154754873006,30.87732415150025,21.53051527427151,24.445792035657732,20.070565084586466
+206,MTR_235,,,t2_recon_gt,35.270727344608794,33.45295130441293,23.29783908045977,30.136748737122623,29.436790100655646,26.664932278396137,33.407198883777056,43.47635066628041,37.32688885293642,36.45559919901417,40.778236252895255,35.51049769970724,39.035776131045246,38.5483968341616,30.122453958759642,33.34610432808954,35.316140366482834,31.001859193438136,36.17447942631438,17.694050494376935,33.90501255712462,28.210840203473076,28.693532594692087,40.44921510724277,37.17318594551915,34.699649773382774,33.11161757446108,27.349073862627183,27.336001270446243,21.457239987251672,31.268573351278604,24.778281444582817,22.73715983465381,25.714619755244758,33.56442092407897,25.934549305718996,30.0681449569184,36.48147202722825,31.08969634936882,31.44799107142857,30.065727029438005,23.581530902797162,30.70492622560685,29.099756499882176,26.336466552315606,28.23280637254902,17.694050494376935,17.323174745661277,17.919791160757647
+207,MTR_237,,,t2_recon_gt,36.220314140626435,31.845161290322583,24.98369411288691,31.54729333701963,28.189144704614478,25.80468409586057,33.20250936329588,39.956629085824154,40.032080679405524,43.84366289555665,38.12156336909019,40.839931099279674,44.30430056957726,35.88773439031295,32.32627162540143,37.72810567116585,33.11804281345565,33.300062451209996,38.819457515994294,22.1484468151867,31.63284753573235,26.516010950332422,24.861079774375504,38.37059148319415,35.416570552595076,32.81362103101855,30.399387184495772,29.547295320317158,21.342012962256955,19.81043356207112,27.893478744714002,25.1404541015625,22.900023534949398,31.616598079561044,32.45852555404794,30.51226431413251,32.413791348600505,41.06491482421167,37.78965619883911,42.924899135446694,26.42654116673562,24.884433691462316,30.002564406980888,31.549730123997083,29.474475915094963,36.61912289648139,22.149089975466424,19.950347471842804,24.14785971027121
+208,MTR_240,,,t2_recon_gt,37.02890107295188,30.713096055341396,22.76932056969414,33.48183735500279,30.534218489470756,24.959284403669727,27.35331408904186,46.2597934595525,40.37852727761354,47.62873301607007,45.15650708881683,42.378772132409544,38.51420594147867,38.16130132277315,30.955123719070237,40.18211182964269,37.739074590395035,33.46457158962796,32.917178016593354,18.789144676139514,34.79791276336982,26.50309222909384,29.705002266888318,39.40829192889478,42.13486527150869,33.58902091542892,36.22960941987363,33.50943833606261,27.64239520958084,31.468088679879074,37.793263646922185,31.783736842105263,27.96175528507367,26.029804234918096,35.42063234698014,37.8255766062603,37.59723282442748,44.55675485008818,38.1571491615181,29.513975782038344,30.94684002066472,34.32395929694727,37.705449882453514,37.241386586284854,32.70792302951449,27.56952062430323,18.789144676139514,17.938311776718855,19.22521805875375
+209,MTR_241,,,t2_recon_gt,36.517759703774665,29.622084144332984,25.219705671213212,33.91336442586041,30.893247094935322,24.48305386178862,31.44559348332041,41.28192204301075,39.71452991452992,45.56995262985952,40.08009448142581,38.1207958571818,44.18444880345234,35.45882682817407,32.34501278772379,39.6989746291643,35.53662797005533,31.056325618095737,37.777418851435705,21.859094100328388,35.08661954178574,32.44930206588498,24.702498277050307,45.47734481196194,38.96682934764926,39.641120560280136,32.039360722952054,30.131749099324793,26.37566574839302,22.051298383145518,28.521789560894778,23.19863542739444,21.682270577105015,30.35031704587841,34.3697519661222,33.467581983405765,36.81017301038062,37.88958261469472,41.31892752203722,45.02103225806452,29.824954320020886,27.21797049620027,32.2007064966979,29.477428866283354,30.242000213469954,35.72484046324746,21.859094100328388,21.245303064191457,22.809267701540772
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+

neurips2021/recon-models/6x/Unrolled_E1-oplus-E2/config.yaml

@@ -0,0 +1,238 @@
+AUG_TEST:
+  UNDERSAMPLE:
+    ACCELERATIONS:
+    - 6
+AUG_TRAIN:
+  NOISE_P: 0.2
+  UNDERSAMPLE:
+    ACCELERATIONS:
+    - 6
+    CALIBRATION_SIZE: 24
+    CENTER_FRACTIONS: []
+    NAME: PoissonDiskMaskFunc
+    PRECOMPUTE:
+      NUM: 100000
+      SEED: -1
+  USE_NOISE: false
+CUDNN_BENCHMARK: false
+DATALOADER:
+  ALT_SAMPLER:
+    PERIOD_SUPERVISED: 1
+    PERIOD_UNSUPERVISED: 1
+  DATA_KEYS: []
+  DROP_LAST: true
+  FILTER:
+    BY: []
+  GROUP_SAMPLER:
+    AS_BATCH_SAMPLER: true
+    BATCH_BY:
+    - num_coils
+    - matrix_shape
+  NUM_WORKERS: 8
+  PREFETCH_FACTOR: 2
+  SAMPLER_TRAIN: GroupSampler
+  SUBSAMPLE_TRAIN:
+    NUM_TOTAL: -1
+    NUM_TOTAL_BY_GROUP: []
+    NUM_UNDERSAMPLED: 0
+    NUM_VAL: -1
+    NUM_VAL_BY_GROUP: []
+    SEED: 1000
+DATASETS:
+  QDESS:
+    DATASET_TYPE: ''
+    ECHO_KIND: echo1-echo2-mc
+    KWARGS: []
+  TEST:
+  - stanford_qdess_v0.1.0_test
+  TRAIN:
+  - stanford_qdess_v0.1.0_train
+  VAL:
+  - stanford_qdess_v0.1.0_val
+DESCRIPTION:
+  BRIEF: Recon only unrolled baseline - 8 unrolled, 2 resblocks, 256 features, L1
+    loss, lr=8e-4, echo=echo1-echo2-mc, acc=6
+  ENTITY_NAME: mtrecon
+  EXP_NAME: recon-baseline/unrolled-6x-echo1-echo2-mc/version_001
+  PROJECT_NAME: mtrecon
+  TAGS:
+  - neurips
+  - recon-baseline
+  - unrolled
+  - baseline
+  - unrolled_6x
+MODEL:
+  CASCADE:
+    ITFS:
+      PERIOD: 0
+    RECON_MODEL_NAME: ''
+    SEG_MODEL_NAME: ''
+    SEG_NORMALIZE: ''
+    USE_MAGNITUDE: false
+    ZERO_FILL: false
+  CS:
+    MAX_ITER: 200
+    REGULARIZATION: 0.005
+  DENOISING:
+    META_ARCHITECTURE: GeneralizedUnrolledCNN
+    NOISE:
+      STD_DEV:
+      - 1
+      USE_FULLY_SAMPLED_TARGET: true
+      USE_FULLY_SAMPLED_TARGET_EVAL: null
+  DEVICE: cpu
+  META_ARCHITECTURE: GeneralizedUnrolledCNN
+  N2R:
+    META_ARCHITECTURE: GeneralizedUnrolledCNN
+    USE_SUPERVISED_CONSISTENCY: false
+  NORMALIZER:
+    KEYWORDS: []
+    NAME: TopMagnitudeNormalizer
+  PARAMETERS:
+    INIT: []
+    USE_COMPLEX_WEIGHTS: false
+  RECON_LOSS:
+    NAME: l1
+    RENORMALIZE_DATA: false
+    WEIGHT: 1.0
+  SEG:
+    ACTIVATION: sigmoid
+    CLASSES: []
+    INCLUDE_BACKGROUND: false
+    IN_CHANNELS: null
+    LOSS_NAME: DiceLoss
+    LOSS_WEIGHT: 1.0
+    MODEL:
+      DYNUNET_MONAI:
+        DEEP_SUPERVISION: false
+        DEEP_SUPR_NUM: 1
+        KERNEL_SIZE:
+        - 3
+        NORM_NAME: instance
+        RES_BLOCK: false
+        STRIDES:
+        - 1
+        UPSAMPLE_KERNEL_SIZE:
+        - 2
+      UNET_MONAI:
+        ACTIVATION:
+        - prelu
+        - {}
+        CHANNELS: []
+        DROPOUT: 0.0
+        KERNEL_SIZE:
+        - 3
+        NORM:
+        - instance
+        - {}
+        NUM_RES_UNITS: 0
+        STRIDES: []
+        UP_KERNEL_SIZE:
+        - 3
+      VNET_MONAI:
+        ACTIVATION:
+        - elu
+        - inplace: true
+        DROPOUT_DIM: 3
+        DROPOUT_PROB: 0.5
+    USE_MAGNITUDE: true
+  TASKS:
+  - recon
+  TB_RECON:
+    CHANNELS:
+    - 16
+    - 32
+    - 64
+    DEC_NUM_CONV_BLOCKS:
+    - 2
+    - 3
+    ENC_NUM_CONV_BLOCKS:
+    - 1
+    - 2
+    - 3
+    KERNEL_SIZE:
+    - 5
+    MULTI_CONCAT: []
+    ORDER:
+    - conv
+    - relu
+    STRIDES:
+    - 2
+    USE_MAGNITUDE: false
+  UNET:
+    BLOCK_ORDER:
+    - conv
+    - instancenorm
+    - - leakyrelu
+      - negative_slope: 0.2
+    - dropout
+    CHANNELS: 32
+    DROPOUT: 0.0
+    IN_CHANNELS: 2
+    NUM_POOL_LAYERS: 4
+    OUT_CHANNELS: 2
+  UNROLLED:
+    CONV_BLOCK:
+      ACTIVATION: relu
+      NORM: none
+      NORM_AFFINE: false
+      ORDER:
+      - act
+      - conv
+    DROPOUT: 0.0
+    FIX_STEP_SIZE: false
+    KERNEL_SIZE:
+    - 3
+    NUM_EMAPS: 2
+    NUM_FEATURES: 128
+    NUM_RESBLOCKS: 2
+    NUM_UNROLLED_STEPS: 8
+    PADDING: ''
+    SHARE_WEIGHTS: false
+  WEIGHTS: ''
+OUTPUT_DIR: results://skm-tea/neurips2021/6x/Unrolled_E1-oplus-E2
+SEED: 1000
+SOLVER:
+  BASE_LR: 0.0008
+  CHECKPOINT_MONITOR: val_loss
+  CHECKPOINT_PERIOD: 1
+  EARLY_STOPPING:
+    MIN_DELTA: 0.0
+    MONITOR: val_loss
+    PATIENCE: 0
+  GAMMA: 1.0
+  GRAD_ACCUM_ITERS: 6
+  LR_SCHEDULER_NAME: ''
+  MAX_ITER: 20
+  MIN_LR: null
+  MOMENTUM: 0.9
+  OPTIMIZER: Adam
+  STEPS: []
+  TEST_BATCH_SIZE: 8
+  TRAIN_BATCH_SIZE: 4
+  WARMUP_FACTOR: 0.001
+  WARMUP_ITERS: 1000
+  WARMUP_METHOD: linear
+  WEIGHT_DECAY: 0.0001
+  WEIGHT_DECAY_NORM: 0.0
+TEST:
+  EVAL_PERIOD: 1
+  EXPECTED_RESULTS: []
+  FLUSH_PERIOD: 1000
+  QDESS_EVALUATOR:
+    ADDITIONAL_PATHS: []
+  VAL_METRICS:
+    RECON:
+    - psnr
+    - psnr_scan
+    - psnr_mag
+    - psnr_mag_scan
+    - nrmse
+    - nrmse_scan
+    - nrmse_mag
+    - nrmse_mag_scan
+    - ssim (Wang)
+    SEM_SEG: []
+TIME_SCALE: epoch
+VERSION: 1
+VIS_PERIOD: -400

neurips2021/recon-models/6x/Unrolled_E1-oplus-E2/model-gpu.ckpt

@@ -0,0 +1,3 @@
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+144,MTR_005,0.8227794,0.7702339,ssim (Wang)_scan,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
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+180,MTR_005,,,t2_recon_gt,32.73131429320983,27.11039868001995,20.501396753491886,30.57102376599634,27.35588918124129,20.930302096177556,25.72927164704588,40.23342426803965,36.796611165524,40.908497146480656,38.25488019914946,33.79012059369202,35.39124704848718,33.66843752399969,28.497846774968757,35.695029650273455,32.791376768486664,27.350285581969743,30.565215479331577,18.02563753377117,32.68610453903811,24.773490522422566,25.97101624480544,34.94334935897436,43.3114186097189,30.22186306074265,34.81203984890008,28.60626973094462,26.62504752851711,25.019025157232704,29.526626672819567,23.778105018407288,21.713338117695308,22.46749024707412,31.5695108393552,32.30175707426704,35.84055380301437,41.31318085357228,30.779474529600737,28.778698683191323,28.90408660005124,28.479568952963447,32.47798803964938,31.687726015741333,25.991651326475367,25.34757864969954,18.02563753377117,18.681120428604707,17.628672191853287
+181,MTR_006,,,t2_recon_gt,40.04453962250158,29.879695587872813,25.67926670992862,32.57818181818182,35.61708328901181,26.185839909808344,38.27369643572287,45.810166092134125,41.48685655456417,45.674300313552436,51.133289831430126,44.15154809737651,51.06379504504504,37.777838543285064,33.36226855713094,39.013065068493155,43.29017424975799,34.9572351719363,44.6535827546064,23.69505359708255,35.59087416571708,28.892792199235735,28.319042842814156,41.320452969724975,42.53042839983985,35.51404297235732,35.67710751796573,35.397207505263395,35.780591982015736,25.441424075531078,31.282301587301585,33.56471932943865,26.283621613347623,33.3322192513369,40.21808066759388,35.792618086873965,39.721761416589,49.74898648648648,48.16111481234732,41.08387307818122,37.76394529631165,30.132139399806388,35.16380197171024,40.096288441145276,35.21025733961581,36.818581727232605,23.69505359708255,22.82269705603039,24.03309209114048
+182,MTR_030,,,t2_recon_gt,40.07598016039395,35.62168752697454,25.304686704024455,34.94289541575709,43.492132428159586,28.770808254514186,33.04933817594834,45.3695078781148,33.93188067444876,47.31789381050161,50.32164206642067,39.73148379052369,43.20520909757887,40.58311371745504,29.578923017606993,41.176656322348656,46.92548520079671,34.34436225298531,38.10227134455486,20.968663093587196,34.669909925220935,29.2174681619464,29.862394845176304,38.713340898038574,39.364028225187916,34.34258092738407,34.97896084586156,35.534663875655646,27.43119221411192,31.559860199110354,37.27281380130874,32.660883084577115,29.033842750854614,31.14437821171634,35.89769470404985,41.454799604156364,45.14398589065256,34.986164488854726,43.18142028985507,39.652241918665275,31.143961748633878,36.123975807371906,40.873713086977574,33.70082502578205,34.82858838893505,34.89523043328354,20.212778660710452,19.77517707240294,21.04342088883356
+183,MTR_034,,,t2_recon_gt,31.40828923937929,29.06056824838899,21.34295051353875,26.870401756087603,27.440633955709945,23.5634954954955,26.559234543670264,38.950664627690855,32.668678231126314,36.54431579486654,37.57863277224321,35.576843631092586,32.905397201802224,33.995782336884744,26.877256446991403,31.699314683168822,32.53818550824769,29.553094786301614,29.786995321016832,17.75390150663368,28.254155325712212,22.560671764592005,21.667533104462972,33.25629598662208,33.95527495259438,28.2992956798708,28.207991925494333,27.553282574133227,26.310344827586206,22.64546288743883,28.267883880825057,24.53907734056988,22.098670977011494,24.24961767204758,34.00646882294098,31.204025544531877,31.586062840091273,34.03172133919513,29.436505759736697,30.855318078953985,29.72010636726252,26.685406685686605,29.812048684855412,28.76517615176152,25.51899130657121,27.274473229706388,17.75390150663368,19.02291854911579,16.95231358799788
+184,MTR_048,,,t2_recon_gt,33.38004575614666,27.522514050206066,21.430876446964326,24.12708275925416,26.386990425426905,25.010986091576807,30.015059872922777,42.9235488976407,32.73771059312255,35.47422709519552,41.77837811714672,42.63107309486781,42.274563180552036,35.29158682412359,27.150291851505955,29.731886011807916,34.163782912412685,33.84446090278319,36.034270256824826,23.046882410378018,30.429571724955544,22.848209804249624,23.928145896656538,37.11287772803581,35.96283793056127,30.61688380952381,30.252282397057762,31.0224109905911,22.900875118259222,21.608156831839228,26.462274337776282,31.102731339769253,26.08727672793166,34.94428369795342,33.090942857142856,33.740334286342645,37.510129268763265,46.84986945169713,39.756851790995725,39.4505149330587,27.51594202898551,27.341075604053,31.616282628262827,37.70227055122418,32.11051983782218,36.776591289782246,23.047055849069768,18.9969734919641,27.117101905261322
+185,MTR_052,,,t2_recon_gt,32.7966813781178,19.566987858932357,25.497423018126227,30.105573164289485,28.61531475101785,24.436790123456788,31.56959521946361,29.46345817290865,35.72077532662241,40.327682893414924,39.6195048994327,34.02127022168963,39.09965748324645,24.752027522935784,30.658845155709344,35.12450224215247,34.15377309528753,29.10866433021807,35.24565668328542,18.872110485384823,33.34132015120675,47.613725490196074,27.94955242966752,66.58125,36.12120669056153,52.14328358208956,32.17418159357628,25.76053968810233,20.091262683201805,21.250878208839993,20.312316715542522,26.374359899026327,24.012932047966142,28.28498823529412,27.081657963446474,28.524944665781323,28.546628470691935,30.535566546762592,27.76800748362956,32.27035024154589,23.330611010284333,24.63929271058872,24.051290774464675,28.2263758254953,25.627211796246648,30.030494578153927,18.872110485384823,18.425523883899515,19.058382193268184
+186,MTR_065,,,t2_recon_gt,28.170454545454547,24.784373337697943,18.37749674054759,24.539945683577947,21.87295423023578,19.204736106256554,27.320677682762167,33.94909973939825,23.126845806127577,30.75311342592592,30.85669445806768,27.629295117480417,35.16192384769539,29.448613455510007,20.79682742740182,27.6449658801758,26.553615781673226,23.515065688449067,31.293320429015672,19.373700142450144,29.464176514519174,23.39689767086674,22.08050785531604,37.22102702233035,33.84149924561264,30.633736638617236,28.371921328745593,25.221999865124587,20.248037383177568,17.90585214379553,25.570011189854537,18.731053294167015,20.22326708074534,24.22493415276558,30.917479108635096,30.290295774647888,33.622703180212014,29.126638176638178,31.357993593476998,28.035392051557462,24.878933051231677,23.588625347379306,29.256825075834175,23.14000724987917,25.34951065826518,25.938719806763284,19.373700142450144,18.87015078661127,19.744078563334824
+187,MTR_079,,,t2_recon_gt,33.766073658636266,29.294194335021572,22.27507451564829,24.755250948966683,28.123443650677938,23.74099033108702,28.223342415985467,44.61698541942814,36.20230055658627,34.77396737979242,45.94911042944785,37.473798494499135,40.405163572060125,36.91789905273575,29.25292805354155,29.75017440016912,36.809800403677954,30.647480337896884,34.39705183924011,19.42573113207547,29.031524926686213,20.339101680903827,24.797721387881925,31.931182356544824,36.2593522093522,26.99713816561107,31.066389019239796,30.801950508777292,23.770576848625627,19.816491375683636,29.0890701754386,26.389928360724824,22.71358836421598,31.118698652645413,34.883358778625954,32.69298675821481,40.126196172248804,34.708097395243485,39.89511077158135,41.61086769759451,28.571943711521552,25.761956521739126,34.25538447181784,29.939067407586375,30.25571205007825,35.66641221374046,19.42573113207547,20.1658908714766,19.000631219367296
+188,MTR_080,,,t2_recon_gt,32.74203598670057,32.12960135213894,21.668136225798925,25.148605678874382,30.572072750753332,28.492154954253458,30.68508641516447,42.95918683677119,27.559372003835094,33.15207097591889,39.52767330588628,38.711757269279396,34.86929504154872,37.485436807356756,24.5752630956604,29.154601507193423,34.97792612859097,33.40007083586318,32.795629245826134,19.61092715231788,31.13869569703849,24.97641580432738,26.412018917155905,35.83301067262348,36.091405670179604,30.752867896289125,31.479236925946072,27.353980369349003,21.443489965736664,20.925671467497082,25.385316671400172,25.888107992286265,24.16075975359343,24.10382626680455,30.269514285714283,31.389842909403917,33.270911086717895,36.27069885641678,30.622139502920632,29.520114513318394,25.515607698391772,25.895217169136433,29.132722259482822,30.637642408742153,27.214969411509934,26.56171486669679,19.61092715231788,19.026566340100327,20.15495690330669
+189,MTR_096,,,t2_recon_gt,29.586104053629093,22.231745413637935,19.248959160972507,25.679953060825348,24.274041314448862,20.126592726334792,23.838514392795794,35.35413843382795,32.61398244213887,40.13643634661152,34.91269944998094,31.798756449265774,33.45159927890806,28.823607969843835,25.91631759178147,32.9176133921944,29.667324627998784,25.888864942528734,28.67073139158576,19.459645342698927,28.176913940179244,21.790883167671506,22.27423798986366,33.291522728915226,34.02320989252881,27.885416108153652,28.435318282125277,27.408077020990998,22.842217898832686,20.7638517163993,28.41880971880972,21.938435737155057,21.623639146656462,25.675169578622814,33.06044404168554,30.15810602628002,34.78784319707138,37.20394537177542,33.78042817033224,25.269826973216404,27.563093992045214,25.258154859967046,31.426689237861982,28.7408841179951,27.092626703857693,25.486911052399826,19.459645342698927,19.59167164297942,19.30388878452001
+190,MTR_099,,,t2_recon_gt,29.939809928507852,27.07355252024658,19.279984383133783,24.49575175093298,27.533914338919928,21.135391887770663,23.213077603360606,36.350991129965294,26.927358725416976,33.81119673148532,38.935731555425306,36.83586888331242,31.804928020704157,31.81382293247158,23.187375922626625,29.1262829082682,33.28166974510528,28.875166228544924,27.562639882089638,17.38941623021244,32.4394771029555,25.39172897627619,27.67075731067233,39.44034633435831,35.78492537313433,32.87794403001164,32.049476469911404,26.29973862880651,22.595427242782407,19.787102643690464,28.83918613413715,22.946012269938652,20.15818788890575,21.79217477166132,30.4884882418813,29.361115786942406,33.81395089285714,35.01898480068827,30.991649159663865,27.709754655631098,26.256607105755247,24.295996602491506,31.116152431548837,28.395650485436896,25.18873262336395,24.485095507129408,17.38941623021244,17.451552555448412,17.33697574738213
+191,MTR_120,,,t2_recon_gt,38.60725704761214,34.96633135700486,28.302537562604343,32.00830555707338,39.90521608565088,27.57141041931385,32.5651769277971,46.6046015936255,42.985348047538196,39.97210326416029,43.81470988654781,42.32053746995849,44.76105759376921,40.795776521449945,35.58384544153548,35.975944715625516,41.866134226877904,34.834097020544256,38.65712603665405,22.643967595508546,35.03660957297044,28.81678661557155,28.04733933022651,40.74323899371068,40.88740810556079,35.1425229337664,34.914966980894285,32.401577591294455,22.71007814605228,22.789007694613773,31.187399256044635,26.198996655518396,27.10912154310946,36.64668969487622,32.6653756260434,34.939071956960326,38.21210292812778,41.62186079885195,41.896995820271684,45.11692755733528,27.1562630480167,28.51582228326906,34.46233970381402,33.15959628670121,34.07111671381134,40.3868831377592,22.643967595508546,20.837303370786515,24.948618593387042
+192,MTR_126,,,t2_recon_gt,35.46315425409269,33.19636302470751,23.38685540950455,32.24522998729352,29.51120803754061,25.103730249226256,30.72050878573302,41.22601351351351,34.25544678192044,42.48227366418266,37.41897977663749,39.53113018075589,41.327613521230546,37.22607991058955,28.740857787810388,37.26513526119403,33.459456364513024,31.90797382244037,35.886441742563605,19.077051621935603,33.96615169829344,27.249860659544822,24.715923762680607,42.62387572113713,39.81889613150064,35.35042666178355,32.574190813241906,28.56583702186695,21.327599410898383,21.62187119057294,28.72086228679722,27.426402321083174,26.85691843859092,26.74378860672615,25.822515359595226,32.71343859649123,35.88545971563981,38.15741873189572,31.133215350223548,29.606881635863154,23.346007789678676,26.77751440687181,31.976936331524083,32.02964241336463,28.82394173093402,28.078009895547005,19.077051621935603,18.656957686127477,19.603402456210993
+193,MTR_144,,,t2_recon_gt,31.319269939584707,26.788954193841953,21.52340054767239,31.027980616592863,29.644357995226734,27.321316614420063,24.056753972127325,36.41115797401619,30.393714580113343,36.09019353685245,35.28980708457148,36.84358464292819,31.788000660211264,31.616757992593154,25.886344058778818,33.4749519511089,32.48546446790841,31.63973480064947,27.894846233681108,21.506067566274282,32.160486248535996,32.29571696718048,25.54257382823083,37.06409712649772,33.566943513025535,34.76371319594984,29.653366807610997,28.566671766885975,27.952915578764145,25.58544471153846,30.66756667218817,26.375331294597352,22.444609665427507,21.293673965936737,32.32009679062659,29.270917593528818,33.729274047186934,32.19169435215947,31.641056765440915,29.951875901875905,29.96483219901431,27.38186298669295,32.12855287087555,28.992749018874978,26.916701388888892,25.54230837316339,21.506067566274282,28.2231953665772,18.065113249873363
+194,MTR_156,,,t2_recon_gt,34.899816616347984,31.415690376569042,21.087812769628993,26.205733135580214,32.038121431555496,24.061477682284448,30.115481566019948,42.63366994866617,32.56124667258207,36.866882243377475,41.6147972182056,40.2880400572246,44.26003009027081,37.007404376744084,26.74422572178478,31.504812366573212,36.85420864928499,32.04681075753309,37.149664513232395,19.48232442645074,34.67824012285866,26.48242783123612,28.744856487704595,40.80688368938623,41.593649873142446,33.957710139798266,35.44817336056274,30.27788458787515,24.911495285136954,21.243726561662918,27.411887125220456,23.948012552301254,24.20571302037201,26.32338041889917,38.548191144708426,32.36477957118767,38.580891719745225,43.36649544711651,39.50237965732934,36.79996887643946,31.103003187055656,26.479166430394105,32.47990366088632,32.249176564527396,31.070822653484683,30.92254406339664,19.48232442645074,18.314845767221836,20.89631415612318
+195,MTR_158,,,t2_recon_gt,36.322535242050044,30.23411354804127,21.482338591640918,27.62016638100414,29.444558931064282,24.007631484365643,32.271554704865395,44.063518107238366,39.45275244849713,42.316095989426294,47.04186485211885,38.90798417995303,48.48985507246377,37.10006300630063,30.29857509734073,35.01161326517891,38.1854016064257,31.340843270868824,40.298852295409176,24.50062746843189,35.617829367829366,28.15993308905528,26.941555217426124,43.056657081236516,43.19596060629375,35.989944830713426,35.2314040182075,35.681362382546865,34.13385949310805,25.002445797287198,31.869291081345963,29.95135887360838,24.782335985241556,32.71719635378172,45.33033980582524,47.27917658591233,36.88140740740741,49.611019816336395,45.492723043694966,47.135709482178875,38.86873235822427,34.64120819195347,34.2183127929179,37.891206324419294,33.2669411924857,38.81426133939996,24.50062746843189,21.171850421184903,27.550037304683336
+196,MTR_176,,,t2_recon_gt,34.68551179232102,29.860086262167048,23.22994413407821,30.647138853205654,29.579348458406052,23.895649570943924,27.156509034527996,43.27290295560608,35.346237864077665,43.304098560624546,40.99561352796647,37.31978313786236,37.523766521141084,36.478957625867416,29.03787085514834,36.83849228841621,35.30681842897017,30.261393933032434,32.3332069161167,18.77013444354852,27.628953710211867,21.660825109975033,21.89559646958337,31.778628106076425,33.89462422634836,27.047912613263662,28.107387742024077,32.68882038726908,26.688808337109197,24.76576151121606,35.50338552687262,25.265448504983386,24.571820809248553,28.50637254901961,35.416553287981856,35.07508917954816,45.26023612157749,42.38398093841642,38.717280977958886,35.67046467218332,30.56585243011836,29.505703872437355,39.964396462616286,32.99841033283656,31.140268340930593,31.623179174743836,18.77013444354852,19.73063326206751,17.612761248185777
+197,MTR_188,,,t2_recon_gt,34.11007043700839,26.571855450956573,23.71731866340668,27.936548059893735,29.8440771064359,23.05,25.52247908921933,42.34141357679648,38.06834061135371,41.99099062702004,46.60315959161741,36.5998023715415,36.41397639926383,34.36888991248272,30.64477234401349,34.9505404097435,38.070226349390595,29.78426028238183,31.159194081712716,22.219625427152753,29.140443642646606,20.214858461912282,22.5532204604497,33.15318050392399,39.661977038334314,27.208702204856266,30.75450771885639,30.9364359192148,27.15785744060025,21.179219600725954,31.017794432548182,27.90431623931624,21.574952760865,29.004232424677184,42.59395638629284,33.20923804328059,42.2396551724138,40.94615384615384,36.81853470437018,37.514103170847136,33.345404595404595,26.641449921558912,36.196517527675276,33.397823398466485,28.42778227204438,32.67314833707406,22.219625427152753,21.029220588851192,23.196706772086625
+198,MTR_196,,,t2_recon_gt,31.230066866497573,23.741434939503286,19.986222692036645,23.890075693860386,24.69995407225964,22.364500562972495,26.60778433687525,39.53499779379321,31.759979245935664,34.05943943524149,39.85769230769231,39.934351271046545,41.855126800250474,31.485867801377523,25.92719972067039,28.98210485790284,32.22480930734263,31.035633401221997,34.252527869367256,17.772381892398286,29.865666081217732,22.998109619686797,19.919479937233803,36.90672368033028,38.09233993503091,30.40104640820384,29.311497427565662,27.34485633745415,24.439306012563566,19.296895306859206,25.995318352059925,23.38743304491141,19.7547893205112,28.182738669238187,29.356615878107455,29.479747216370747,35.342475728155335,38.37918781725888,35.321048334421945,33.30486921529175,26.540346068185713,23.82185076223589,30.286375607779576,29.91460974758637,26.550809153774864,30.457308791994283,17.772381892398286,17.496586536629966,17.988307930921344
+199,MTR_198,,,t2_recon_gt,30.90165793015328,25.31937243658663,18.784525382147578,24.718258612164163,23.894893280632413,19.55945050901509,23.785130588046787,38.66595858281531,32.47372430900071,39.46346169636259,37.63477147805135,33.25386105059308,38.211063157894735,32.13708530574874,25.84491455725121,32.105059334060016,30.93168530659468,26.449183623735838,31.053027892671544,20.058566675687292,27.745408918874446,21.67278603125603,23.057099912981567,32.8497150633665,32.23590817210511,27.61262939022737,27.856286566262785,29.64168957509571,33.44375863657301,23.379037470521443,28.400527627143482,23.61943305402033,20.86202462678435,29.752058460271716,34.205827067669176,29.864640059679225,39.75195775792039,35.03824804856895,33.75049273220005,38.874374079528714,33.795598809819,26.51580751364272,33.78410386808445,28.771920555718616,26.911668112171146,33.912863860277646,20.058566675687292,18.374071961207775,21.13853910862636
+200,MTR_199,,,t2_recon_gt,30.084764674665912,26.738792694497157,20.023742090991263,22.46625028261361,32.32984591972608,27.98155570652174,27.808476901130255,37.42207675753228,24.0376316538571,29.579504860954103,36.31473714727484,34.72247191011236,33.912086092715235,32.05987793986305,22.087904524820615,26.023723927420722,34.30789107819167,31.274188495344177,30.902076002814916,19.51050761962275,29.776851983844143,26.395246096066415,23.591940407864207,33.734300595238096,33.02394290537948,30.176248203162437,29.384043355325165,25.573052593255564,26.476682393841568,25.09609375,26.40432820855615,22.583925686591275,20.557782740049916,21.989197299324836,27.469720873786407,28.86444157520981,26.596570537802027,30.953001765744556,25.134075917859366,27.445918367346938,26.923637853338793,26.843226578868606,26.49308204390068,26.582536557930258,22.907636758691204,24.724023949108144,19.51050761962275,19.918976933711708,19.120891171571348
+201,MTR_218,,,t2_recon_gt,38.06025853192115,29.57528059499662,23.796150348590484,30.509379296798272,32.0060820537428,24.548530741410488,32.980771602823275,46.049697863968525,36.62574165636588,45.037435742364686,49.294317873609984,41.41178276269185,49.284428258256135,37.65708574579542,30.149104820198925,37.67426723065439,40.12080601005921,32.79574910477071,41.00503967701518,22.483502385580493,32.14368221861781,25.2824668291362,24.918616452991454,37.580793045963325,39.37870517684494,31.82588697415104,32.4640143048726,34.04892697139635,33.414472640761296,36.108322580645165,36.81500701262272,29.58304848273457,23.710698013486425,30.375408229915088,40.93362979433019,47.209618104667605,46.23459214501511,38.22258965999068,34.02706219673577,40.936083333333336,36.54498958574404,39.58577758085954,40.681748656469615,33.28250897487036,28.378335495459535,35.0157634566093,22.483502385580493,25.850694183864913,20.44810320385597
+202,MTR_219,,,t2_recon_gt,30.613012917039207,27.633100233100233,20.968717304875497,26.277988482922957,29.266520984639115,23.701779910230616,24.9858087067048,36.03230727811182,32.31915897435898,35.57411776367962,34.58887549181368,33.497771891555004,33.28225260253355,31.87137487546418,26.700372902423865,30.92658381703626,31.944608359676856,28.583895014753846,29.160585877079452,19.644008714596954,28.81400193907691,22.06806672624367,22.09702837423313,34.20973798057302,35.01445201345175,28.731789266194784,28.897308093876255,27.788978018840993,23.398129781807878,20.23487333887043,26.307403859312984,24.99461137323069,22.33804593597525,28.079081410535483,28.14740596627756,27.89345577124259,36.275225294027805,37.931209987195906,34.39772541541814,32.198267390742174,25.61297444427642,23.848077872223747,31.017908185361627,30.646119423856803,27.961556049539535,29.961706654059807,19.644008714596954,19.88003856505845,19.405932169050608
+203,MTR_221,,,t2_recon_gt,36.359911425731866,26.307704875179713,24.481664145234493,28.704887175416715,23.915501181704435,29.76,32.805867775201854,46.83232659998692,43.68552155314248,44.6595205108126,39.03515244326883,41.07234544596508,46.81073820022865,36.56587239327972,33.685556606748655,36.43981073108041,31.470839131644865,35.143660694034935,39.735416750838354,21.3944489049467,31.683406657867717,30.410292269013194,22.194995203070036,41.33278955954323,31.19884963023829,36.26640670553936,27.044961640601947,30.640962467693004,28.795477093667934,20.851336606655757,29.054173329069393,23.119207836456557,22.981718924972004,27.688421491045396,42.711644951140066,36.581596162232884,40.88589058000823,36.07505112474438,34.11741854636592,40.79284199363733,34.60511643719191,28.0044323252355,34.22921914357683,28.101179554390562,27.450184378142808,33.45351061348262,21.3944489049467,20.27813680008631,22.181300380228134
+204,MTR_224,,,t2_recon_gt,31.952339198593013,27.031989210125882,20.346442400774443,27.152731179814225,27.25605445738971,21.663912087912088,28.28183074014832,37.288931457230426,32.28562544845731,35.868850792790354,40.63639396770319,35.11199110122358,39.53039173789173,32.143205720037486,26.351220979189222,31.561051333013502,33.87749355542336,28.348545836558664,33.96554751880241,19.112402976897087,30.32164283094976,22.74185080578169,24.520601319220738,33.55506001091108,38.39358108108108,28.680166279679426,31.896134779797404,32.610492815121994,30.457046332046332,25.083621127475872,29.89090598290598,27.61968592260235,27.721789419969383,31.376536312849158,35.37654090399701,39.78640747438215,37.25860082304526,36.63716265499635,38.03414584186809,38.385330261136716,32.733535004321524,31.80686328555678,33.23422969187675,31.539457831325304,32.40025090604963,34.41582014987511,19.112213775312192,17.848508988367993,19.717442096022687
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neurips2021/recon-models/6x/Unrolled_E1/config.yaml

@@ -0,0 +1,240 @@
+AUG_TEST:
+  UNDERSAMPLE:
+    ACCELERATIONS:
+    - 6
+AUG_TRAIN:
+  NOISE_P: 0.2
+  UNDERSAMPLE:
+    ACCELERATIONS:
+    - 6
+    CALIBRATION_SIZE: 24
+    CENTER_FRACTIONS: []
+    NAME: PoissonDiskMaskFunc
+    PRECOMPUTE:
+      NUM: 100000
+      SEED: -1
+  USE_NOISE: false
+CUDNN_BENCHMARK: false
+DATALOADER:
+  ALT_SAMPLER:
+    PERIOD_SUPERVISED: 1
+    PERIOD_UNSUPERVISED: 1
+  DATA_KEYS: []
+  DROP_LAST: true
+  FILTER:
+    BY: []
+  GROUP_SAMPLER:
+    AS_BATCH_SAMPLER: true
+    BATCH_BY:
+    - num_coils
+    - matrix_shape
+  NUM_WORKERS: 8
+  PREFETCH_FACTOR: 2
+  SAMPLER_TRAIN: GroupSampler
+  SUBSAMPLE_TRAIN:
+    NUM_TOTAL: -1
+    NUM_TOTAL_BY_GROUP: []
+    NUM_UNDERSAMPLED: 0
+    NUM_VAL: -1
+    NUM_VAL_BY_GROUP: []
+    SEED: 1000
+DATASETS:
+  QDESS:
+    DATASET_TYPE: ''
+    ECHO_KIND: echo1
+    KWARGS: []
+  TEST:
+  - stanford_qdess_v0.1.0_test
+  TRAIN:
+  - stanford_qdess_v0.1.0_train
+  VAL:
+  - stanford_qdess_v0.1.0_val
+DESCRIPTION:
+  BRIEF: Recon only unrolled baseline - 8 unrolled, 2 resblocks, 256 features, L1
+    loss, lr=8e-4- echo=echo1, acc=6
+  ENTITY_NAME: mtrecon
+  EXP_NAME: recon-baseline/unrolled-6x-echo1/version_004
+  PROJECT_NAME: mtrecon
+  TAGS:
+  - unrolled
+  - gcp
+  - unrolled_6x
+  - neurips
+  - recon-baseline
+  - baseline
+MODEL:
+  CASCADE:
+    ITFS:
+      PERIOD: 0
+    RECON_MODEL_NAME: ''
+    SEG_MODEL_NAME: ''
+    SEG_NORMALIZE: ''
+    USE_MAGNITUDE: false
+    ZERO_FILL: false
+  CS:
+    MAX_ITER: 200
+    REGULARIZATION: 0.005
+  DENOISING:
+    META_ARCHITECTURE: GeneralizedUnrolledCNN
+    NOISE:
+      STD_DEV:
+      - 1
+      USE_FULLY_SAMPLED_TARGET: true
+      USE_FULLY_SAMPLED_TARGET_EVAL: null
+  DEVICE: cpu
+  META_ARCHITECTURE: GeneralizedUnrolledCNN
+  N2R:
+    META_ARCHITECTURE: GeneralizedUnrolledCNN
+    USE_SUPERVISED_CONSISTENCY: false
+  NORMALIZER:
+    KEYWORDS: []
+    NAME: TopMagnitudeNormalizer
+  PARAMETERS:
+    INIT: []
+    USE_COMPLEX_WEIGHTS: false
+  RECON_LOSS:
+    NAME: l1
+    RENORMALIZE_DATA: false
+    WEIGHT: 1.0
+  SEG:
+    ACTIVATION: sigmoid
+    CLASSES: []
+    INCLUDE_BACKGROUND: false
+    IN_CHANNELS: null
+    LOSS_NAME: DiceLoss
+    LOSS_WEIGHT: 1.0
+    MODEL:
+      DYNUNET_MONAI:
+        DEEP_SUPERVISION: false
+        DEEP_SUPR_NUM: 1
+        KERNEL_SIZE:
+        - 3
+        NORM_NAME: instance
+        RES_BLOCK: false
+        STRIDES:
+        - 1
+        UPSAMPLE_KERNEL_SIZE:
+        - 2
+      UNET_MONAI:
+        ACTIVATION:
+        - prelu
+        - {}
+        CHANNELS: []
+        DROPOUT: 0.0
+        KERNEL_SIZE:
+        - 3
+        NORM:
+        - instance
+        - {}
+        NUM_RES_UNITS: 0
+        STRIDES: []
+        UP_KERNEL_SIZE:
+        - 3
+      VNET_MONAI:
+        ACTIVATION:
+        - elu
+        - inplace: true
+        DROPOUT_DIM: 3
+        DROPOUT_PROB: 0.5
+    USE_MAGNITUDE: true
+  TASKS:
+  - recon
+  TB_RECON:
+    CHANNELS:
+    - 16
+    - 32
+    - 64
+    DEC_NUM_CONV_BLOCKS:
+    - 2
+    - 3
+    ENC_NUM_CONV_BLOCKS:
+    - 1
+    - 2
+    - 3
+    KERNEL_SIZE:
+    - 5
+    MULTI_CONCAT: []
+    ORDER:
+    - conv
+    - relu
+    STRIDES:
+    - 2
+    USE_MAGNITUDE: false
+  UNET:
+    BLOCK_ORDER:
+    - conv
+    - instancenorm
+    - - leakyrelu
+      - negative_slope: 0.2
+    - dropout
+    CHANNELS: 32
+    DROPOUT: 0.0
+    IN_CHANNELS: 2
+    NUM_POOL_LAYERS: 4
+    OUT_CHANNELS: 2
+  UNROLLED:
+    CONV_BLOCK:
+      ACTIVATION: relu
+      NORM: none
+      NORM_AFFINE: false
+      ORDER:
+      - act
+      - conv
+    DROPOUT: 0.0
+    FIX_STEP_SIZE: false
+    KERNEL_SIZE:
+    - 3
+    NUM_EMAPS: 1
+    NUM_FEATURES: 128
+    NUM_RESBLOCKS: 2
+    NUM_UNROLLED_STEPS: 8
+    PADDING: ''
+    SHARE_WEIGHTS: false
+  WEIGHTS: ''
+OUTPUT_DIR: results://skm-tea/neurips2021/6x/Unrolled_E1
+SEED: 1000
+SOLVER:
+  BASE_LR: 0.0008
+  CHECKPOINT_MONITOR: val_loss
+  CHECKPOINT_PERIOD: 1
+  EARLY_STOPPING:
+    MIN_DELTA: 0.0
+    MONITOR: val_loss
+    PATIENCE: 0
+  GAMMA: 1.0
+  GRAD_ACCUM_ITERS: 6
+  LR_SCHEDULER_NAME: ''
+  MAX_ITER: 20
+  MIN_LR: null
+  MOMENTUM: 0.9
+  OPTIMIZER: Adam
+  STEPS: []
+  TEST_BATCH_SIZE: 8
+  TRAIN_BATCH_SIZE: 4
+  WARMUP_FACTOR: 0.001
+  WARMUP_ITERS: 1000
+  WARMUP_METHOD: linear
+  WEIGHT_DECAY: 0.0001
+  WEIGHT_DECAY_NORM: 0.0
+TEST:
+  EVAL_PERIOD: 1
+  EXPECTED_RESULTS: []
+  FLUSH_PERIOD: 1000
+  QDESS_EVALUATOR:
+    ADDITIONAL_PATHS: []
+  VAL_METRICS:
+    RECON:
+    - psnr
+    - psnr_scan
+    - psnr_mag
+    - psnr_mag_scan
+    - nrmse
+    - nrmse_scan
+    - nrmse_mag
+    - nrmse_mag_scan
+    - ssim_old
+    - ssim (Wang)
+    SEM_SEG: []
+TIME_SCALE: epoch
+VERSION: 1
+VIS_PERIOD: -400

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+186,MTR_065,,t2_recon_gt,28.170453254865524,24.784373337697943,18.37749674054759,24.539945683577947,21.872943561293074,19.204736106256554,27.320671253134446,33.94909973939825,23.126845806127577,30.75311342592592,30.85669445806768,27.629295117480417,35.16192384769539,29.448613455510007,20.79682742740182,27.6449658801758,26.55361067102775,23.515065688449067,31.29331725582281,19.373702120924346,29.464178711066204,23.39689767086674,22.08050785531604,37.22102702233035,33.841507186532205,30.633736638617236,28.3719255766535,25.221999865124587,20.248037383177568,17.90585214379553,25.570011189854537,18.731053294167015,20.22326708074534,24.22493415276558,30.917479108635096,30.290295774647888,33.622703180212014,29.126638176638178,31.357993593476998,28.035392051557462,24.878933051231677,23.588625347379306,29.256825075834175,23.14000724987917,25.34951065826518,25.938719806763284,19.373702120924346,18.870155454927406,19.744078563334824
+187,MTR_079,,t2_recon_gt,33.766070252719054,29.294194335021572,22.27507451564829,24.755250948966683,28.123443650677938,23.74099033108702,28.223342415985467,44.61698541942814,36.20230055658627,34.77394619783944,45.949095092024535,37.473798494499135,40.405163572060125,36.91789905273575,29.25292805354155,29.750163830461894,36.80979292816028,30.647480337896884,34.39705183924011,19.42572641509434,29.031524926686213,20.339101680903827,24.797721387881925,31.931182356544824,36.2593522093522,26.99713816561107,31.066389019239796,30.801948158766717,23.770576848625627,19.816491375683636,29.0890701754386,26.389928360724824,22.71358836421598,31.118698652645413,34.88330788804071,32.69298675821481,40.126196172248804,34.708097395243485,39.89511077158135,41.61086769759451,28.571921723834652,25.761956521739126,34.25538447181784,29.939067407586375,30.25571205007825,35.66641221374046,19.42572641509434,20.165877941556765,19.000631219367296
+188,MTR_080,,t2_recon_gt,32.74203663863355,32.12960135213894,21.668136225798925,25.148605678874382,30.572072750753332,28.492154954253458,30.68508641516447,42.95918683677119,27.559372003835094,33.15207097591889,39.52767330588628,38.711757269279396,34.869299607341794,37.485436807356756,24.5752630956604,29.154601507193423,34.97792612859097,33.40007083586318,32.795631548647094,19.610930398649526,31.13869982457951,24.97641580432738,26.412018917155905,35.83301067262348,36.09142051358171,30.752867896289125,31.479244696557615,27.35398298328389,21.443489965736664,20.925671467497082,25.385316671400172,25.888107992286265,24.16075975359343,24.10382626680455,30.269542857142856,31.389842909403917,33.270911086717895,36.27069885641678,30.622150956362386,29.520114513318394,25.51562088056947,25.895217169136433,29.132722259482822,30.637642408742153,27.21497482540198,26.56171486669679,19.610930398649526,19.026566340100327,20.154963171916627
+189,MTR_096,,t2_recon_gt,29.5861055510909,22.231745413637935,19.248959160972507,25.679953060825348,24.274041314448862,20.126592726334792,23.838514392795794,35.35413843382795,32.61398244213887,40.13644024813702,34.91269944998094,31.79876967852891,33.451604429564775,28.823607969843835,25.91631759178147,32.917615345548306,29.667324627998784,25.888871473354232,28.670733980582526,19.459645342698927,28.176919339164236,21.790883167671506,22.27423798986366,33.291529955915294,34.023222840864946,27.88541993795718,28.43532507214395,27.408077020990998,22.842217898832686,20.7638517163993,28.41880971880972,21.938435737155057,21.623639146656462,25.675169578622814,33.06044404168554,30.15810602628002,34.787827943868216,37.20394537177542,33.7804398689752,25.269826973216404,27.563093992045214,25.258154859967046,31.426682034289012,28.7408841179951,27.09263196673859,25.486911052399826,19.459645342698927,19.59167164297942,19.30388878452001
+190,MTR_099,,t2_recon_gt,29.939809928507852,27.07355252024658,19.279984383133783,24.49575175093298,27.533914338919928,21.135391887770663,23.213077603360606,36.350991129965294,26.927358725416976,33.81119673148532,38.935731555425306,36.83586888331242,31.804928020704157,31.81382293247158,23.187375922626625,29.1262829082682,33.28166974510528,28.875166228544924,27.562639882089638,17.38941623021244,32.4394771029555,25.39172897627619,27.67075731067233,39.44034633435831,35.78492537313433,32.87794403001164,32.049476469911404,26.29973862880651,22.595427242782407,19.787102643690464,28.83918613413715,22.946012269938652,20.15818788890575,21.79217477166132,30.4884882418813,29.361115786942406,33.81395089285714,35.01898480068827,30.991649159663865,27.709754655631098,26.256607105755247,24.295996602491506,31.116152431548837,28.395650485436896,25.18873262336395,24.485095507129408,17.38941623021244,17.451552555448412,17.33697574738213
+191,MTR_120,,t2_recon_gt,38.60725777230233,34.96633801878623,28.302537562604343,32.00830009289109,39.90521608565088,27.57141041931385,32.565166700756805,46.60460823373174,42.985348047538196,39.97210326416029,43.81471636952998,42.32053746995849,44.76105759376921,40.79578317259727,35.58384544153548,35.97594197334503,41.866137480074165,34.834097020544256,38.65712091737484,22.643965423625737,35.03660957297044,28.81678661557155,28.04733933022651,40.74323899371068,40.88740810556079,35.1425229337664,34.914966980894285,32.40158047011069,22.71007814605228,22.789007694613773,31.18741475511469,26.198996655518396,27.10912154310946,36.64671848013817,32.6653756260434,34.939071956960326,38.21210292812778,41.62186079885195,41.896995820271684,45.11692755733528,27.1562630480167,28.51582228326906,34.46234797716555,33.15959628670121,34.07111671381134,40.386899212345284,22.643965423625737,20.837299496319254,24.948618593387042
+192,MTR_126,,t2_recon_gt,35.463155436524126,33.19636302470751,23.38685540950455,32.24522998729352,29.51120803754061,25.103730249226256,30.72050878573302,41.22601351351351,34.25544678192044,42.4822842344485,37.41897373981286,39.53113018075589,41.32762273187805,37.22607991058955,28.740857787810388,37.265140443615266,33.459453351012534,31.90797382244037,35.88644622908161,19.077051621935603,33.96615353527931,27.249860659544822,24.715923762680607,42.62388267185654,39.81889613150064,35.35043032411646,32.574190813241906,28.565838673449168,21.327599410898383,21.62187119057294,28.72086228679722,27.426426499032882,26.85691843859092,26.74378860672615,25.822515359595226,32.71343859649123,35.88545971563981,38.15741873189572,31.133215350223548,29.606881635863154,23.346007789678676,26.77751440687181,31.976936331524083,32.029656219798426,28.82394173093402,28.078009895547005,19.077051621935603,18.656957686127477,19.603402456210993
+193,MTR_144,,t2_recon_gt,31.31927146265929,26.788954193841953,21.52340054767239,31.027980616592863,29.64436276849642,27.321316614420063,24.056753972127325,36.41115797401619,30.393714580113343,36.09019353685245,35.28981180133013,36.84358464292819,31.788006161971833,31.616757992593154,25.886344058778818,33.4749519511089,32.48546921342982,31.63973480064947,27.894848964876825,21.50606278112738,32.16048759473903,32.29571696718048,25.54257382823083,37.06410242816245,33.566943513025535,34.76371593996104,29.653366807610997,28.566671766885975,27.952915578764145,25.58544471153846,30.66756667218817,26.375331294597352,22.444609665427507,21.293673965936737,32.32009679062659,29.270917593528818,33.729274047186934,32.19169435215947,31.641056765440915,29.951875901875905,29.96483219901431,27.38186298669295,32.12855287087555,28.992749018874978,26.916701388888892,25.54230837316339,21.50606278112738,28.2231953665772,18.06510601345973
+194,MTR_156,,t2_recon_gt,34.899819411830485,31.415690376569042,21.087812769628993,26.205738249884924,32.038121431555496,24.061477682284448,30.115481566019948,42.63367415635782,32.56124667258207,36.866882243377475,41.614810989464985,40.2880400572246,44.26003510531595,37.00740647489562,26.74422572178478,31.50481493865583,36.854215574252976,32.04681075753309,37.1496670075578,19.482326585695006,34.67824012285866,26.48242783123612,28.744856487704595,40.80688368938623,41.593649873142446,33.957710139798266,35.44817336056274,30.27788458787515,24.911495285136954,21.243726561662918,27.411887125220456,23.948012552301254,24.20571302037201,26.32338041889917,38.548191144708426,32.36477957118767,38.580891719745225,43.36649544711651,39.50237965732934,36.79996887643946,31.103003187055656,26.479166430394105,32.47990366088632,32.249176564527396,31.070822653484683,30.92254406339664,19.482326585695006,18.314847738247757,20.896316543327764
+195,MTR_158,,t2_recon_gt,36.32253578843842,30.23411354804127,21.482338591640918,27.62016638100414,29.444558931064282,24.007631484365643,32.271554704865395,44.06351357476318,39.45275244849713,42.316095989426294,47.04187832648386,38.90798417995303,48.48985507246377,37.100060756075614,30.29857509734073,35.01161326517891,38.18540829986613,31.340843270868824,40.298852295409176,24.50062746843189,35.6178312928313,28.15993308905528,26.941555217426124,43.056657081236516,43.19596830037701,35.989944830713426,35.23140794223826,35.681362382546865,34.13385949310805,25.002445797287198,31.869291081345963,29.95135887360838,24.782335985241556,32.71719635378172,45.33033980582524,47.27917658591233,36.88140740740741,49.611019816336395,45.492723043694966,47.135709482178875,38.86873235822427,34.64120819195347,34.2183127929179,37.891206324419294,33.2669411924857,38.81426133939996,24.50062746843189,21.171850421184903,27.550037304683336
+196,MTR_176,,t2_recon_gt,34.68551109372381,29.860086262167048,23.22994413407821,30.647133014130564,29.579348458406052,23.895649570943924,27.156509034527996,43.27289697259782,35.346237864077665,43.304098560624546,40.995620754444275,37.31978313786236,37.523766521141084,36.47895467296619,29.03787085514834,36.83848930521166,35.30682205386595,30.261393933032434,32.3332069161167,18.77013115239678,27.628953710211867,21.660825109975033,21.89559646958337,31.778628106076425,33.89462422634836,27.047912613263662,28.107387742024077,32.688818161584685,26.688808337109197,24.76576151121606,35.50338552687262,25.265448504983386,24.571820809248553,28.50637254901961,35.416553287981856,35.07506936187079,45.26023612157749,42.38398093841642,38.717280977958886,35.67046467218332,30.56585243011836,29.505694760820045,39.964396462616286,32.99841033283656,31.140268340930593,31.623179174743836,18.77013115239678,19.730630250835613,17.612757619738755
+197,MTR_188,,t2_recon_gt,34.11007043700839,26.571849377467355,23.71735941320293,27.936548059893735,29.8440771064359,23.05,25.52247908921933,42.34141357679648,38.06834061135371,41.99099062702004,46.60315959161741,36.5998023715415,36.41397639926383,34.36888684170121,30.6447934232715,34.9505404097435,38.070226349390595,29.78426028238183,31.159194081712716,22.219625427152753,29.140438560829356,20.214858461912282,22.5532204604497,33.15318050392399,39.66195757929558,27.208702204856266,30.754498390933257,30.936428841072104,27.15785744060025,21.179204476709018,31.01777301927195,27.904273504273505,21.574952760865,29.004232424677184,42.59395638629284,33.20923804328059,42.2396551724138,40.94615384615384,36.81853470437018,37.514103170847136,33.345404595404595,26.64144166460243,36.19650599630996,33.397798664358156,28.42778227204438,32.67314833707406,22.219625427152753,21.029220588851192,23.196706772086625
+198,MTR_196,,t2_recon_gt,31.230065979674002,23.741434939503286,19.986222692036645,23.890075693860386,24.69995407225964,22.364500562972495,26.60778433687525,39.53500514781585,31.759979245935664,34.05943244565597,39.85769230769231,39.934351271046545,41.85511897307452,31.485871407450144,25.92719972067039,28.982101357972844,32.22480930734263,31.035633401221997,34.25252394410426,17.772381892398286,29.865663420086225,22.998109619686797,19.919479937233803,36.906713850388286,38.09233993503091,30.40104117616282,29.311497427565662,27.344854639315308,24.439306012563566,19.296895306859206,25.995318352059925,23.38743304491141,19.754776667088446,28.182738669238187,29.356615878107455,29.479747216370747,35.342475728155335,38.37918781725888,35.321048334421945,33.30486921529175,26.540346068185713,23.82185076223589,30.286375607779576,29.91460974758637,26.550802024666716,30.457308791994283,17.772381892398286,17.496586536629966,17.988307930921344
+199,MTR_198,,t2_recon_gt,30.90166002482183,25.31937243658663,18.784525382147578,24.71826273281688,23.894901185770753,19.55945050901509,23.785130588046787,38.66596239655239,32.47372430900071,39.46346580178996,37.63477147805135,33.25386105059308,38.211063157894735,32.13708725381334,25.84491455725121,32.10506344733973,30.931689163131512,26.449183623735838,31.053027892671544,20.058566675687292,27.74541097581043,21.67278603125603,23.057107823748122,32.8497150633665,32.23590817210511,27.61262939022737,27.85629034084475,29.641690830352097,33.443781667434365,23.379037470521443,28.400527627143482,23.61943305402033,20.86202462678435,29.752058460271716,34.205827067669176,29.864640059679225,39.75195775792039,35.03824804856895,33.75049273220005,38.874374079528714,33.79561120753782,26.51580751364272,33.78410386808445,28.771920555718616,26.911668112171146,33.912863860277646,20.058566675687292,18.374071961207775,21.13853910862636
+200,MTR_199,,t2_recon_gt,30.084763296277664,26.738792694497157,20.023742090991263,22.46625028261361,32.32983640859806,27.98155570652174,27.808476901130255,37.42207675753228,24.0376316538571,29.57949920868189,36.31473714727484,34.72247191011236,33.912086092715235,32.05987793986305,22.087904524820615,26.023721101124863,34.307886284098,31.274188495344177,30.902076002814916,19.510504067351068,29.776851983844143,26.395246096066415,23.591940407864207,33.734300595238096,33.02394290537948,30.176248203162437,29.384043355325165,25.573052593255564,26.476682393841568,25.09609375,26.40432820855615,22.583925686591275,20.557782740049916,21.989197299324836,27.469720873786407,28.86444157520981,26.596570537802027,30.953001765744556,25.134075917859366,27.445918367346938,26.923637853338793,26.843226578868606,26.49308204390068,26.582536557930258,22.907636758691204,24.724023949108144,19.510504067351068,19.918969657280073,19.120891171571348
+201,MTR_218,,t2_recon_gt,38.06025393498087,29.57526707234618,23.796150348590484,30.509379296798272,32.0060820537428,24.548530741410488,32.98076475022271,46.049697863968525,36.62574165636588,45.037435742364686,49.29430431244915,41.41178276269185,49.28442118662046,37.6570788530466,30.149104820198925,37.67426723065439,40.12079964347106,32.79574910477071,41.005032716135325,22.483502385580493,32.14368221861781,25.2824668291362,24.918616452991454,37.580793045963325,39.37870517684494,31.82588697415104,32.4640143048726,34.04892697139635,33.414472640761296,36.108322580645165,36.81500701262272,29.58304848273457,23.710698013486425,30.375408229915088,40.93362979433019,47.209618104667605,46.23459214501511,38.22258965999068,34.02706219673577,40.936083333333336,36.54498958574404,39.58577758085954,40.681748656469615,33.28250897487036,28.378335495459535,35.0157634566093,22.483502385580493,25.850694183864913,20.44810320385597
+202,MTR_219,,t2_recon_gt,30.61301174062398,27.633100233100233,20.968717304875497,26.277988482922957,29.266520984639115,23.701779910230616,24.9858087067048,36.03230727811182,32.31915897435898,35.57411776367962,34.58887549181368,33.497771891555004,33.282240060203186,31.87137487546418,26.700372902423865,30.92658381703626,31.944608359676856,28.583895014753846,29.160579563748854,19.644008714596954,28.814004193817503,22.06806672624367,22.09702837423313,34.209746143171984,35.01445201345175,28.7317937460801,28.897308093876255,27.788978018840993,23.398129781807878,20.23487333887043,26.307403859312984,24.99461137323069,22.33804593597525,28.079081410535483,28.14740596627756,27.89345577124259,36.275225294027805,37.931209987195906,34.39772541541814,32.198267390742174,25.61297444427642,23.848077872223747,31.017908185361627,30.646119423856803,27.961556049539535,29.961706654059807,19.644008714596954,19.88003856505845,19.405932169050608
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+204,MTR_224,,t2_recon_gt,31.95234088968182,27.031989210125882,20.346442400774443,27.152731179814225,27.25605445738971,21.663912087912088,28.28183074014832,37.288931457230426,32.28562544845731,35.86885756877626,40.63640731349259,35.11199110122358,39.53039173789173,32.143205720037486,26.351220979189222,31.56105475978343,33.87750016524555,28.348545836558664,33.96554751880241,19.112405259793626,30.32164283094976,22.74185080578169,24.520601319220738,33.55506001091108,38.39358108108108,28.680166279679426,31.896134779797404,32.61049522615488,30.457046332046332,25.083621127475872,29.89090598290598,27.61968592260235,27.72180642966491,31.376536312849158,35.37654090399701,39.78640747438215,37.25860082304526,36.63716265499635,38.03414584186809,38.385330261136716,32.733535004321524,31.80686328555678,33.23422969187675,31.539457831325304,32.40026019886628,34.41582014987511,19.11221605826085,17.848508988367993,19.717445472347897
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+

neurips2021/recon-models/6x/Unrolled_E2/config.yaml

@@ -0,0 +1,239 @@
+AUG_TEST:
+  UNDERSAMPLE:
+    ACCELERATIONS:
+    - 6
+AUG_TRAIN:
+  NOISE_P: 0.2
+  UNDERSAMPLE:
+    ACCELERATIONS:
+    - 6
+    CALIBRATION_SIZE: 24
+    CENTER_FRACTIONS: []
+    NAME: PoissonDiskMaskFunc
+    PRECOMPUTE:
+      NUM: 100000
+      SEED: -1
+  USE_NOISE: false
+CUDNN_BENCHMARK: false
+DATALOADER:
+  ALT_SAMPLER:
+    PERIOD_SUPERVISED: 1
+    PERIOD_UNSUPERVISED: 1
+  DATA_KEYS: []
+  DROP_LAST: true
+  FILTER:
+    BY: []
+  GROUP_SAMPLER:
+    AS_BATCH_SAMPLER: true
+    BATCH_BY:
+    - num_coils
+    - matrix_shape
+  NUM_WORKERS: 8
+  PREFETCH_FACTOR: 2
+  SAMPLER_TRAIN: GroupSampler
+  SUBSAMPLE_TRAIN:
+    NUM_TOTAL: -1
+    NUM_TOTAL_BY_GROUP: []
+    NUM_UNDERSAMPLED: 0
+    NUM_VAL: -1
+    NUM_VAL_BY_GROUP: []
+    SEED: 1000
+DATASETS:
+  QDESS:
+    DATASET_TYPE: ''
+    ECHO_KIND: echo2
+    KWARGS: []
+  TEST:
+  - stanford_qdess_v0.1.0_test
+  TRAIN:
+  - stanford_qdess_v0.1.0_train
+  VAL:
+  - stanford_qdess_v0.1.0_val
+DESCRIPTION:
+  BRIEF: Recon only unrolled baseline - 8 unrolled, 2 resblocks, 256 features, L1
+    loss, lr=8e-4- echo=echo2, acc=6
+  ENTITY_NAME: mtrecon
+  EXP_NAME: recon-baseline/unrolled-6x-echo2/version_001
+  PROJECT_NAME: mtrecon
+  TAGS:
+  - recon-baseline
+  - unrolled
+  - baseline
+  - unrolled_6x
+  - neurips
+MODEL:
+  CASCADE:
+    ITFS:
+      PERIOD: 0
+    RECON_MODEL_NAME: ''
+    SEG_MODEL_NAME: ''
+    SEG_NORMALIZE: ''
+    USE_MAGNITUDE: false
+    ZERO_FILL: false
+  CS:
+    MAX_ITER: 200
+    REGULARIZATION: 0.005
+  DENOISING:
+    META_ARCHITECTURE: GeneralizedUnrolledCNN
+    NOISE:
+      STD_DEV:
+      - 1
+      USE_FULLY_SAMPLED_TARGET: true
+      USE_FULLY_SAMPLED_TARGET_EVAL: null
+  DEVICE: cpu
+  META_ARCHITECTURE: GeneralizedUnrolledCNN
+  N2R:
+    META_ARCHITECTURE: GeneralizedUnrolledCNN
+    USE_SUPERVISED_CONSISTENCY: false
+  NORMALIZER:
+    KEYWORDS: []
+    NAME: TopMagnitudeNormalizer
+  PARAMETERS:
+    INIT: []
+    USE_COMPLEX_WEIGHTS: false
+  RECON_LOSS:
+    NAME: l1
+    RENORMALIZE_DATA: false
+    WEIGHT: 1.0
+  SEG:
+    ACTIVATION: sigmoid
+    CLASSES: []
+    INCLUDE_BACKGROUND: false
+    IN_CHANNELS: null
+    LOSS_NAME: DiceLoss
+    LOSS_WEIGHT: 1.0
+    MODEL:
+      DYNUNET_MONAI:
+        DEEP_SUPERVISION: false
+        DEEP_SUPR_NUM: 1
+        KERNEL_SIZE:
+        - 3
+        NORM_NAME: instance
+        RES_BLOCK: false
+        STRIDES:
+        - 1
+        UPSAMPLE_KERNEL_SIZE:
+        - 2
+      UNET_MONAI:
+        ACTIVATION:
+        - prelu
+        - {}
+        CHANNELS: []
+        DROPOUT: 0.0
+        KERNEL_SIZE:
+        - 3
+        NORM:
+        - instance
+        - {}
+        NUM_RES_UNITS: 0
+        STRIDES: []
+        UP_KERNEL_SIZE:
+        - 3
+      VNET_MONAI:
+        ACTIVATION:
+        - elu
+        - inplace: true
+        DROPOUT_DIM: 3
+        DROPOUT_PROB: 0.5
+    USE_MAGNITUDE: true
+  TASKS:
+  - recon
+  TB_RECON:
+    CHANNELS:
+    - 16
+    - 32
+    - 64
+    DEC_NUM_CONV_BLOCKS:
+    - 2
+    - 3
+    ENC_NUM_CONV_BLOCKS:
+    - 1
+    - 2
+    - 3
+    KERNEL_SIZE:
+    - 5
+    MULTI_CONCAT: []
+    ORDER:
+    - conv
+    - relu
+    STRIDES:
+    - 2
+    USE_MAGNITUDE: false
+  UNET:
+    BLOCK_ORDER:
+    - conv
+    - instancenorm
+    - - leakyrelu
+      - negative_slope: 0.2
+    - dropout
+    CHANNELS: 32
+    DROPOUT: 0.0
+    IN_CHANNELS: 2
+    NUM_POOL_LAYERS: 4
+    OUT_CHANNELS: 2
+  UNROLLED:
+    CONV_BLOCK:
+      ACTIVATION: relu
+      NORM: none
+      NORM_AFFINE: false
+      ORDER:
+      - act
+      - conv
+    DROPOUT: 0.0
+    FIX_STEP_SIZE: false
+    KERNEL_SIZE:
+    - 3
+    NUM_EMAPS: 1
+    NUM_FEATURES: 128
+    NUM_RESBLOCKS: 2
+    NUM_UNROLLED_STEPS: 8
+    PADDING: ''
+    SHARE_WEIGHTS: false
+  WEIGHTS: ''
+OUTPUT_DIR: results://skm-tea/neurips2021/6x/Unrolled_E2
+SEED: 1000
+SOLVER:
+  BASE_LR: 0.0008
+  CHECKPOINT_MONITOR: val_loss
+  CHECKPOINT_PERIOD: 1
+  EARLY_STOPPING:
+    MIN_DELTA: 0.0
+    MONITOR: val_loss
+    PATIENCE: 0
+  GAMMA: 1.0
+  GRAD_ACCUM_ITERS: 6
+  LR_SCHEDULER_NAME: ''
+  MAX_ITER: 20
+  MIN_LR: null
+  MOMENTUM: 0.9
+  OPTIMIZER: Adam
+  STEPS: []
+  TEST_BATCH_SIZE: 8
+  TRAIN_BATCH_SIZE: 4
+  WARMUP_FACTOR: 0.001
+  WARMUP_ITERS: 1000
+  WARMUP_METHOD: linear
+  WEIGHT_DECAY: 0.0001
+  WEIGHT_DECAY_NORM: 0.0
+TEST:
+  EVAL_PERIOD: 1
+  EXPECTED_RESULTS: []
+  FLUSH_PERIOD: 1000
+  QDESS_EVALUATOR:
+    ADDITIONAL_PATHS: []
+  VAL_METRICS:
+    RECON:
+    - psnr
+    - psnr_scan
+    - psnr_mag
+    - psnr_mag_scan
+    - nrmse
+    - nrmse_scan
+    - nrmse_mag
+    - nrmse_mag_scan
+    - ssim_old
+    - ssim (Wang)
+    SEM_SEG: []
+TIME_SCALE: epoch
+VERSION: 1
+VIS_PERIOD: -400

neurips2021/recon-models/6x/Unrolled_E2/model-gpu.ckpt

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+size 43116881

neurips2021/recon-models/6x/Unrolled_E2/model-raw-gpu.ckpt

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+size 43116881

neurips2021/recon-models/6x/Unrolled_E2/model-raw.ckpt

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neurips2021/recon-models/6x/Unrolled_E2/model.ckpt

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neurips2021/recon-models/6x/Unrolled_E2/scan_metrics.csv

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+159,MTR_158,0.7749874,ssim (Wang)_scan
+160,MTR_176,0.7008165,ssim (Wang)_scan
+161,MTR_188,0.7765202,ssim (Wang)_scan
+162,MTR_196,0.7879599,ssim (Wang)_scan
+163,MTR_198,0.71455854,ssim (Wang)_scan
+164,MTR_199,0.71750456,ssim (Wang)_scan
+165,MTR_218,0.7446267,ssim (Wang)_scan
+166,MTR_219,0.7593743,ssim (Wang)_scan
+167,MTR_221,0.7870104,ssim (Wang)_scan
+168,MTR_224,0.7679205,ssim (Wang)_scan
+169,MTR_227,0.71805805,ssim (Wang)_scan
+170,MTR_235,0.7615935,ssim (Wang)_scan
+171,MTR_237,0.7522939,ssim (Wang)_scan
+172,MTR_240,0.8007619,ssim (Wang)_scan
+173,MTR_241,0.7633345,ssim (Wang)_scan
+174,MTR_244,0.7757887,ssim (Wang)_scan
+175,MTR_248,0.7705573,ssim (Wang)_scan
+176,MTR_066,0.7193102,ssim (Wang)_scan
+177,MTR_173,0.82352024,ssim (Wang)_scan
+178,MTR_178,0.73837924,ssim (Wang)_scan
+179,MTR_223,0.7326915,ssim (Wang)_scan
+

neurips2021/recon-models/8x/U-Net_E1+E2/config.yaml

@@ -0,0 +1,240 @@
+AUG_TEST:
+  UNDERSAMPLE:
+    ACCELERATIONS:
+    - 8
+AUG_TRAIN:
+  NOISE_P: 0.2
+  UNDERSAMPLE:
+    ACCELERATIONS:
+    - 8
+    CALIBRATION_SIZE: 24
+    CENTER_FRACTIONS: []
+    NAME: PoissonDiskMaskFunc
+    PRECOMPUTE:
+      NUM: 100000
+      SEED: -1
+  USE_NOISE: false
+CUDNN_BENCHMARK: false
+DATALOADER:
+  ALT_SAMPLER:
+    PERIOD_SUPERVISED: 1
+    PERIOD_UNSUPERVISED: 1
+  DATA_KEYS: []
+  DROP_LAST: true
+  FILTER:
+    BY: []
+  GROUP_SAMPLER:
+    AS_BATCH_SAMPLER: true
+    BATCH_BY:
+    - num_coils
+    - matrix_shape
+  NUM_WORKERS: 8
+  PREFETCH_FACTOR: 2
+  SAMPLER_TRAIN: GroupSampler
+  SUBSAMPLE_TRAIN:
+    NUM_TOTAL: -1
+    NUM_TOTAL_BY_GROUP: []
+    NUM_UNDERSAMPLED: 0
+    NUM_VAL: -1
+    NUM_VAL_BY_GROUP: []
+    SEED: 1000
+DATASETS:
+  QDESS:
+    DATASET_TYPE: ''
+    ECHO_KIND: echo1+echo2
+    KWARGS: []
+  TEST:
+  - stanford_qdess_v0.1.0_test
+  TRAIN:
+  - stanford_qdess_v0.1.0_train
+  VAL:
+  - stanford_qdess_v0.1.0_val
+DESCRIPTION:
+  BRIEF: Recon only unet baseline - 4 pooling layers, 32 channels, L1 loss, lr=1e-3,
+    echo=echo1+echo2, acc=8
+  ENTITY_NAME: mtrecon
+  EXP_NAME: recon-baseline/unet-8x-echo1+echo2/version_002
+  PROJECT_NAME: mtrecon
+  TAGS:
+  - neurips
+  - recon-baseline
+  - unet_8x
+  - baseline
+  - unet
+MODEL:
+  CASCADE:
+    ITFS:
+      PERIOD: 0
+    RECON_MODEL_NAME: ''
+    SEG_MODEL_NAME: ''
+    SEG_NORMALIZE: ''
+    USE_MAGNITUDE: false
+    ZERO_FILL: false
+  CS:
+    MAX_ITER: 200
+    REGULARIZATION: 0.005
+  DENOISING:
+    META_ARCHITECTURE: GeneralizedUnrolledCNN
+    NOISE:
+      STD_DEV:
+      - 1
+      USE_FULLY_SAMPLED_TARGET: true
+      USE_FULLY_SAMPLED_TARGET_EVAL: null
+  DEVICE: cpu
+  META_ARCHITECTURE: UnetModel
+  N2R:
+    META_ARCHITECTURE: GeneralizedUnrolledCNN
+    USE_SUPERVISED_CONSISTENCY: false
+  NORMALIZER:
+    KEYWORDS: []
+    NAME: TopMagnitudeNormalizer
+  PARAMETERS:
+    INIT: []
+    USE_COMPLEX_WEIGHTS: false
+  RECON_LOSS:
+    NAME: l1
+    RENORMALIZE_DATA: false
+    WEIGHT: 1.0
+  SEG:
+    ACTIVATION: sigmoid
+    CLASSES: []
+    INCLUDE_BACKGROUND: false
+    IN_CHANNELS: null
+    LOSS_NAME: DiceLoss
+    LOSS_WEIGHT: 1.0
+    MODEL:
+      DYNUNET_MONAI:
+        DEEP_SUPERVISION: false
+        DEEP_SUPR_NUM: 1
+        KERNEL_SIZE:
+        - 3
+        NORM_NAME: instance
+        RES_BLOCK: false
+        STRIDES:
+        - 1
+        UPSAMPLE_KERNEL_SIZE:
+        - 2
+      UNET_MONAI:
+        ACTIVATION:
+        - prelu
+        - {}
+        CHANNELS: []
+        DROPOUT: 0.0
+        KERNEL_SIZE:
+        - 3
+        NORM:
+        - instance
+        - {}
+        NUM_RES_UNITS: 0
+        STRIDES: []
+        UP_KERNEL_SIZE:
+        - 3
+      VNET_MONAI:
+        ACTIVATION:
+        - elu
+        - inplace: true
+        DROPOUT_DIM: 3
+        DROPOUT_PROB: 0.5
+    USE_MAGNITUDE: true
+  TASKS:
+  - recon
+  TB_RECON:
+    CHANNELS:
+    - 16
+    - 32
+    - 64
+    DEC_NUM_CONV_BLOCKS:
+    - 2
+    - 3
+    ENC_NUM_CONV_BLOCKS:
+    - 1
+    - 2
+    - 3
+    KERNEL_SIZE:
+    - 5
+    MULTI_CONCAT: []
+    ORDER:
+    - conv
+    - relu
+    STRIDES:
+    - 2
+    USE_MAGNITUDE: false
+  UNET:
+    BLOCK_ORDER:
+    - conv
+    - instancenorm
+    - - leakyrelu
+      - negative_slope: 0.2
+    - dropout
+    CHANNELS: 32
+    DROPOUT: 0.0
+    IN_CHANNELS: 2
+    NUM_POOL_LAYERS: 4
+    OUT_CHANNELS: 2
+  UNROLLED:
+    CONV_BLOCK:
+      ACTIVATION: relu
+      NORM: none
+      NORM_AFFINE: false
+      ORDER:
+      - norm
+      - act
+      - drop
+      - conv
+    DROPOUT: 0.0
+    FIX_STEP_SIZE: false
+    KERNEL_SIZE:
+    - 3
+    NUM_EMAPS: 1
+    NUM_FEATURES: 256
+    NUM_RESBLOCKS: 2
+    NUM_UNROLLED_STEPS: 5
+    PADDING: ''
+    SHARE_WEIGHTS: false
+  WEIGHTS: ''
+OUTPUT_DIR: results://skm-tea/neurips2021/8x/U-Net_E1+E2
+SEED: 1000
+SOLVER:
+  BASE_LR: 0.001
+  CHECKPOINT_MONITOR: val_loss
+  CHECKPOINT_PERIOD: 1
+  EARLY_STOPPING:
+    MIN_DELTA: 0.0
+    MONITOR: val_loss
+    PATIENCE: 0
+  GAMMA: 1.0
+  GRAD_ACCUM_ITERS: 1
+  LR_SCHEDULER_NAME: ''
+  MAX_ITER: 20
+  MIN_LR: null
+  MOMENTUM: 0.9
+  OPTIMIZER: Adam
+  STEPS: []
+  TEST_BATCH_SIZE: 16
+  TRAIN_BATCH_SIZE: 24
+  WARMUP_FACTOR: 0.001
+  WARMUP_ITERS: 1000
+  WARMUP_METHOD: linear
+  WEIGHT_DECAY: 0.0001
+  WEIGHT_DECAY_NORM: 0.0
+TEST:
+  EVAL_PERIOD: 1
+  EXPECTED_RESULTS: []
+  FLUSH_PERIOD: 1000
+  QDESS_EVALUATOR:
+    ADDITIONAL_PATHS: []
+  VAL_METRICS:
+    RECON:
+    - psnr
+    - psnr_scan
+    - psnr_mag
+    - psnr_mag_scan
+    - nrmse
+    - nrmse_scan
+    - nrmse_mag
+    - nrmse_mag_scan
+    - ssim (Wang)
+    SEM_SEG: []
+TIME_SCALE: epoch
+VERSION: 1
+VIS_PERIOD: -400