| # Use an official Python runtime as a parent image | |
| FROM python:3.8-slim-buster | |
| # Set the working directory in the container | |
| WORKDIR /app | |
| # Install system and Python dependencies | |
| RUN apt-get update && \ | |
| apt-get install -y build-essential openslide-tools libgl1-mesa-glx && \ | |
| apt-get clean && \ | |
| rm -rf /var/lib/apt/lists/* | |
| # Copy the entire genomic_plip_model directory contents into the container at /app | |
| RUN adduser --disabled-password --gecos '' myuser | |
| USER myuser | |
| COPY ./ /app/ | |
| # Install Python dependencies | |
| RUN pip install --no-cache-dir -r requirements.txt | |
| # Create a non-root user and switch to it for security | |
| EXPOSE 8888 | |
| # Set the entrypoint to a shell command | |
| ENTRYPOINT ["/bin/bash"] | |