bertNer-biobert
Browse files- README.md +77 -0
- config.json +90 -0
- model.safetensors +3 -0
- runs/Nov20_13-36-45_7bad536ebe99/events.out.tfevents.1732109890.7bad536ebe99.30.0 +3 -0
- runs/Nov20_13-36-45_7bad536ebe99/events.out.tfevents.1732110258.7bad536ebe99.30.1 +3 -0
- runs/Nov20_13-44-18_7bad536ebe99/events.out.tfevents.1732110277.7bad536ebe99.30.2 +3 -0
- runs/Nov20_13-44-18_7bad536ebe99/events.out.tfevents.1732116056.7bad536ebe99.30.3 +3 -0
- special_tokens_map.json +7 -0
- tokenizer.json +0 -0
- tokenizer_config.json +55 -0
- training_args.bin +3 -0
- vocab.txt +0 -0
README.md
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---
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library_name: transformers
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license: apache-2.0
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base_model: bert-base-cased
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tags:
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- generated_from_trainer
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metrics:
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- precision
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- recall
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- f1
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- accuracy
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model-index:
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- name: bertNer-biobert
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results: []
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---
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<!-- This model card has been generated automatically according to the information the Trainer had access to. You
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should probably proofread and complete it, then remove this comment. -->
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# bertNer-biobert
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This model is a fine-tuned version of [bert-base-cased](https://huggingface.co/bert-base-cased) on an unknown dataset.
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It achieves the following results on the evaluation set:
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- Loss: 0.1284
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- Precision: 0.9471
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- Recall: 0.9630
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- F1: 0.9550
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- Accuracy: 0.9758
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## Model description
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More information needed
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## Intended uses & limitations
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More information needed
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## Training and evaluation data
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More information needed
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## Training procedure
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### Training hyperparameters
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The following hyperparameters were used during training:
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- learning_rate: 2e-05
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- train_batch_size: 8
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- eval_batch_size: 8
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- seed: 42
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- optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
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- lr_scheduler_type: linear
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- num_epochs: 10
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- mixed_precision_training: Native AMP
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### Training results
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| Training Loss | Epoch | Step | Validation Loss | Precision | Recall | F1 | Accuracy |
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|:-------------:|:-----:|:-----:|:---------------:|:---------:|:------:|:------:|:--------:|
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| 0.1851 | 1.0 | 1224 | 0.1186 | 0.9202 | 0.9550 | 0.9373 | 0.9670 |
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| 0.1188 | 2.0 | 2448 | 0.1061 | 0.9349 | 0.9684 | 0.9514 | 0.9737 |
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| 0.0789 | 3.0 | 3672 | 0.1051 | 0.9381 | 0.9710 | 0.9543 | 0.9755 |
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| 0.0569 | 4.0 | 4896 | 0.1062 | 0.9403 | 0.9712 | 0.9555 | 0.9761 |
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| 0.0492 | 5.0 | 6120 | 0.1174 | 0.9403 | 0.9646 | 0.9523 | 0.9734 |
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| 0.0405 | 6.0 | 7344 | 0.1220 | 0.9426 | 0.9638 | 0.9531 | 0.9739 |
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| 0.0355 | 7.0 | 8568 | 0.1175 | 0.9446 | 0.9651 | 0.9548 | 0.9756 |
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| 0.0296 | 8.0 | 9792 | 0.1239 | 0.9446 | 0.9660 | 0.9552 | 0.9757 |
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| 0.0224 | 9.0 | 11016 | 0.1247 | 0.9474 | 0.9640 | 0.9556 | 0.9760 |
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| 0.0219 | 10.0 | 12240 | 0.1284 | 0.9471 | 0.9630 | 0.9550 | 0.9758 |
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### Framework versions
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- Transformers 4.45.1
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- Pytorch 2.4.0
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- Datasets 3.0.1
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- Tokenizers 0.20.0
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config.json
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{
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"_name_or_path": "bert-base-cased",
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"architectures": [
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"BertForTokenClassification"
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],
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"attention_probs_dropout_prob": 0.1,
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"classifier_dropout": null,
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"gradient_checkpointing": false,
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"hidden_act": "gelu",
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"hidden_dropout_prob": 0.1,
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"hidden_size": 768,
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"id2label": {
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"0": "LABEL_0",
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"1": "LABEL_1",
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"2": "LABEL_2",
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"3": "LABEL_3",
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"4": "LABEL_4",
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"5": "LABEL_5",
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"6": "LABEL_6",
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"7": "LABEL_7",
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"29": "LABEL_29"
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},
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"initializer_range": 0.02,
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"intermediate_size": 3072,
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"label2id": {
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"LABEL_0": 0,
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"LABEL_1": 1,
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"LABEL_2": 2,
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"LABEL_8": 8,
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"LABEL_9": 9
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},
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"layer_norm_eps": 1e-12,
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"max_position_embeddings": 512,
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"model_type": "bert",
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"num_attention_heads": 12,
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"num_hidden_layers": 12,
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"pad_token_id": 0,
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"position_embedding_type": "absolute",
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"torch_dtype": "float16",
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"transformers_version": "4.45.1",
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"type_vocab_size": 2,
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"use_cache": true,
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"vocab_size": 28996
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}
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model.safetensors
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version https://git-lfs.github.com/spec/v1
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runs/Nov20_13-36-45_7bad536ebe99/events.out.tfevents.1732109890.7bad536ebe99.30.0
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version https://git-lfs.github.com/spec/v1
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runs/Nov20_13-36-45_7bad536ebe99/events.out.tfevents.1732110258.7bad536ebe99.30.1
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runs/Nov20_13-44-18_7bad536ebe99/events.out.tfevents.1732110277.7bad536ebe99.30.2
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runs/Nov20_13-44-18_7bad536ebe99/events.out.tfevents.1732116056.7bad536ebe99.30.3
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version https://git-lfs.github.com/spec/v1
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special_tokens_map.json
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{
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"cls_token": "[CLS]",
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"mask_token": "[MASK]",
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"pad_token": "[PAD]",
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"sep_token": "[SEP]",
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"unk_token": "[UNK]"
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}
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tokenizer.json
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tokenizer_config.json
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{
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"added_tokens_decoder": {
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"0": {
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"content": "[PAD]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"100": {
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"content": "[UNK]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"101": {
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"content": "[CLS]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"102": {
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"content": "[SEP]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"103": {
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"content": "[MASK]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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}
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},
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"clean_up_tokenization_spaces": false,
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"cls_token": "[CLS]",
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"do_lower_case": false,
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"mask_token": "[MASK]",
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"model_max_length": 512,
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"pad_token": "[PAD]",
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"sep_token": "[SEP]",
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"strip_accents": null,
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"tokenize_chinese_chars": true,
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"tokenizer_class": "BertTokenizer",
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"unk_token": "[UNK]"
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}
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training_args.bin
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version https://git-lfs.github.com/spec/v1
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size 5240
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vocab.txt
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