| | import numpy as np |
| | import torch |
| | import os |
| | import csv |
| | import sys |
| | import logging |
| | from transformers import BertTokenizer |
| | from torch.utils.data import (DataLoader, RandomSampler, SequentialSampler, TensorDataset) |
| |
|
| |
|
| | class BERT_Loader: |
| | def __init__(self, args, base_attrs, logger_name = 'Detection'): |
| | self.logger = logging.getLogger(logger_name) |
| | self.train_examples, self.train_labeled_examples, self.train_unlabeled_examples = get_examples(args, base_attrs, 'train') |
| | self.logger.info("Number of labeled training samples = %s", str(len(self.train_labeled_examples))) |
| | self.logger.info("Number of unlabeled training samples = %s", str(len(self.train_unlabeled_examples))) |
| |
|
| | self.eval_examples = get_examples(args, base_attrs, 'eval') |
| | self.logger.info("Number of evaluation samples = %s", str(len(self.eval_examples))) |
| |
|
| | self.test_examples = get_examples(args, base_attrs, 'test') |
| | self.logger.info("Number of testing samples = %s", str(len(self.test_examples))) |
| | self.base_attrs = base_attrs |
| | self.init_loader(args) |
| |
|
| | def init_loader(self, args): |
| | |
| | self.train_labeled_loader = get_loader(self.train_labeled_examples, args, self.base_attrs['label_list'], 'train_labeled', sampler_mode = 'random') |
| | self.train_unlabeled_loader = get_loader(self.train_unlabeled_examples, args, self.base_attrs['label_list'], 'train_unlabeled', sampler_mode = 'sequential') |
| | self.eval_loader = get_loader(self.eval_examples, args, self.base_attrs['label_list'], 'eval', sampler_mode = 'sequential') |
| | self.test_loader = get_loader(self.test_examples, args, self.base_attrs['label_list'], 'test', sampler_mode = 'sequential') |
| | self.num_train_examples = len(self.train_labeled_examples) |
| |
|
| | def get_examples(args, base_attrs, mode): |
| |
|
| | processor = DatasetProcessor() |
| | ori_examples = processor.get_examples(base_attrs['data_dir'], mode) |
| | if mode == 'train': |
| |
|
| | labeled_examples, unlabeled_examples = [], [] |
| | for example in ori_examples: |
| |
|
| | if (example.label in base_attrs['known_label_list']) and (np.random.uniform(0, 1) <= args.labeled_ratio): |
| | labeled_examples.append(example) |
| | else: |
| | example.label = base_attrs['unseen_label'] |
| | unlabeled_examples.append(example) |
| |
|
| | return ori_examples, labeled_examples, unlabeled_examples |
| |
|
| | elif mode == 'eval': |
| |
|
| | examples = [] |
| | for example in ori_examples: |
| | if (example.label in base_attrs['known_label_list']): |
| | examples.append(example) |
| | |
| | return examples |
| | |
| | elif mode == 'test': |
| |
|
| | examples = [] |
| | for example in ori_examples: |
| | if (example.label in base_attrs['label_list']) and (example.label != base_attrs['unseen_label']): |
| | examples.append(example) |
| | else: |
| | example.label = base_attrs['unseen_label'] |
| | examples.append(example) |
| | |
| | return examples |
| |
|
| | def get_loader(examples, args, label_list, mode, sampler_mode = 'sequential'): |
| |
|
| | tokenizer = BertTokenizer.from_pretrained(args.bert_model, do_lower_case=True) |
| | features = convert_examples_to_features(examples, label_list, args.max_seq_length, tokenizer) |
| | input_ids = torch.tensor([f.input_ids for f in features], dtype=torch.long) |
| | input_mask = torch.tensor([f.input_mask for f in features], dtype=torch.long) |
| | segment_ids = torch.tensor([f.segment_ids for f in features], dtype=torch.long) |
| |
|
| | if mode == 'train_unlabeled': |
| | label_ids = torch.tensor([-1 for f in features], dtype=torch.long) |
| | else: |
| | label_ids = torch.tensor([f.label_id for f in features], dtype=torch.long) |
| | datatensor = TensorDataset(input_ids, input_mask, segment_ids, label_ids) |
| |
|
| | if sampler_mode == 'random': |
| | sampler = RandomSampler(datatensor) |
| | elif sampler_mode == 'sequential': |
| | sampler = SequentialSampler(datatensor) |
| |
|
| | if mode == 'train_labeled': |
| | dataloader = DataLoader(datatensor, sampler = sampler, batch_size = args.train_batch_size) |
| |
|
| | else: |
| | if mode == 'train_unlabeled': |
| | dataloader = DataLoader(datatensor, sampler=sampler, batch_size = args.train_batch_size) |
| | elif mode == 'eval': |
| | dataloader = DataLoader(datatensor, sampler=sampler, batch_size = args.eval_batch_size) |
| | elif mode == 'test': |
| | dataloader = DataLoader(datatensor, sampler=sampler, batch_size = args.test_batch_size) |
| | |
| | return dataloader |
| |
|
| | class InputExample(object): |
| | """A single training/test example for simple sequence classification.""" |
| |
|
| | def __init__(self, guid, text_a, text_b=None, label=None): |
| | """Constructs a InputExample. |
| | |
| | Args: |
| | guid: Unique id for the example. |
| | text_a: string. The untokenized text of the first sequence. For single |
| | sequence tasks, only this sequence must be specified. |
| | text_b: (Optional) string. The untokenized text of the second sequence. |
| | Only must be specified for sequence pair tasks. |
| | label: (Optional) string. The label of the example. This should be |
| | specified for train and dev examples, but not for test examples. |
| | """ |
| | self.guid = guid |
| | self.text_a = text_a |
| | self.text_b = text_b |
| | self.label = label |
| |
|
| | class InputFeatures(object): |
| | """A single set of features of data.""" |
| |
|
| | def __init__(self, input_ids, input_mask, segment_ids, label_id): |
| | self.input_ids = input_ids |
| | self.input_mask = input_mask |
| | self.segment_ids = segment_ids |
| | self.label_id = label_id |
| |
|
| | class DataProcessor(object): |
| | """Base class for data converters for sequence classification data sets.""" |
| |
|
| | def get_train_examples(self, data_dir): |
| | """Gets a collection of `InputExample`s for the train set.""" |
| | raise NotImplementedError() |
| |
|
| | def get_dev_examples(self, data_dir): |
| | """Gets a collection of `InputExample`s for the dev set.""" |
| | raise NotImplementedError() |
| |
|
| | def get_labels(self): |
| | """Gets the list of labels for this data set.""" |
| | raise NotImplementedError() |
| |
|
| | @classmethod |
| | def _read_tsv(cls, input_file, quotechar=None): |
| | """Reads a tab separated value file.""" |
| | with open(input_file, "r") as f: |
| | reader = csv.reader(f, delimiter="\t", quotechar=quotechar) |
| | lines = [] |
| | for line in reader: |
| | if sys.version_info[0] == 2: |
| | line = list(unicode(cell, 'utf-8') for cell in line) |
| | lines.append(line) |
| | return lines |
| |
|
| | class DatasetProcessor(DataProcessor): |
| |
|
| | def get_examples(self, data_dir, mode): |
| | if mode == 'train': |
| | return self._create_examples( |
| | self._read_tsv(os.path.join(data_dir, "train.tsv")), "train") |
| | elif mode == 'eval': |
| | return self._create_examples( |
| | self._read_tsv(os.path.join(data_dir, "dev.tsv")), "train") |
| | elif mode == 'test': |
| | return self._create_examples( |
| | self._read_tsv(os.path.join(data_dir, "test.tsv")), "test") |
| |
|
| | def _create_examples(self, lines, set_type): |
| | """Creates examples for the training and dev sets.""" |
| | examples = [] |
| | for (i, line) in enumerate(lines): |
| | if i == 0: |
| | continue |
| | if len(line) != 2: |
| | continue |
| | guid = "%s-%s" % (set_type, i) |
| | text_a = line[0] |
| | label = line[1] |
| |
|
| | examples.append( |
| | InputExample(guid=guid, text_a=text_a, text_b=None, label=label)) |
| | return examples |
| |
|
| | def convert_examples_to_features(examples, label_list, max_seq_length, tokenizer): |
| | """Loads a data file into a list of `InputBatch`s.""" |
| | label_map = {} |
| | if label_list is not None: |
| | for i, label in enumerate(label_list): |
| | label_map[label] = i |
| |
|
| | features = [] |
| | for (ex_index, example) in enumerate(examples): |
| | tokens_a = tokenizer.tokenize(example.text_a) |
| |
|
| | tokens_b = None |
| | if example.text_b: |
| | tokens_b = tokenizer.tokenize(example.text_b) |
| | |
| | |
| | |
| | _truncate_seq_pair(tokens_a, tokens_b, max_seq_length - 3) |
| | else: |
| | |
| | if len(tokens_a) > max_seq_length - 2: |
| | tokens_a = tokens_a[:(max_seq_length - 2)] |
| |
|
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| | tokens = ["[CLS]"] + tokens_a + ["[SEP]"] |
| | segment_ids = [0] * len(tokens) |
| |
|
| | if tokens_b: |
| | tokens += tokens_b + ["[SEP]"] |
| | segment_ids += [1] * (len(tokens_b) + 1) |
| |
|
| | input_ids = tokenizer.convert_tokens_to_ids(tokens) |
| |
|
| | |
| | |
| | input_mask = [1] * len(input_ids) |
| |
|
| | |
| | padding = [0] * (max_seq_length - len(input_ids)) |
| | input_ids += padding |
| | input_mask += padding |
| | segment_ids += padding |
| |
|
| | assert len(input_ids) == max_seq_length |
| | assert len(input_mask) == max_seq_length |
| | assert len(segment_ids) == max_seq_length |
| |
|
| | label_id = label_map[example.label] if label_list is not None else None |
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| |
|
| | features.append( |
| | InputFeatures(input_ids=input_ids, |
| | input_mask=input_mask, |
| | segment_ids=segment_ids, |
| | label_id=label_id)) |
| | return features |
| |
|
| | def _truncate_seq_pair(tokens_a, tokens_b, max_length): |
| | """Truncates a sequence pair in place to the maximum length.""" |
| | |
| | |
| | |
| | |
| | while True: |
| | total_length = len(tokens_a) + len(tokens_b) |
| | if total_length <= max_length: |
| | break |
| | if len(tokens_a) > len(tokens_b): |
| | tokens_a.pop(0) |
| | else: |
| | tokens_b.pop() |
| |
|