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bgc-accession model is a Named Entity Recognition (NER) model that identifies and annotates the accession number of biosynthetic gene clusters in texts.
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Testing examples:
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1. The genome sequences of Leptolyngbya sp. PCC 7375 (ALVN00000000) and G. sunshinyii YC6258 (NZ_CP007142.1) were obtained previously.36,59
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bgc-accession model is a Named Entity Recognition (NER) model that identifies and annotates the accession number of biosynthetic gene clusters in texts.
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The model is a fine-tuned BioBERT model and the training dataset is available in https://gitlab.com/maaly7/emerald_metagenomics_annotations
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Testing examples:
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1. The genome sequences of Leptolyngbya sp. PCC 7375 (ALVN00000000) and G. sunshinyii YC6258 (NZ_CP007142.1) were obtained previously.36,59
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