JunchengDing commited on
Commit
a81fbfe
·
1 Parent(s): fc29af3

Training in progress, step 500

Browse files
.gitignore ADDED
@@ -0,0 +1 @@
 
 
1
+ checkpoint-*/
config.json ADDED
@@ -0,0 +1,26 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "_name_or_path": "michiyasunaga/BioLinkBERT-large",
3
+ "architectures": [
4
+ "BertForMaskedLM"
5
+ ],
6
+ "attention_probs_dropout_prob": 0.1,
7
+ "classifier_dropout": null,
8
+ "gradient_checkpointing": false,
9
+ "hidden_act": "gelu",
10
+ "hidden_dropout_prob": 0.1,
11
+ "hidden_size": 1024,
12
+ "initializer_range": 0.02,
13
+ "intermediate_size": 4096,
14
+ "layer_norm_eps": 1e-12,
15
+ "max_position_embeddings": 512,
16
+ "model_type": "bert",
17
+ "num_attention_heads": 16,
18
+ "num_hidden_layers": 24,
19
+ "pad_token_id": 0,
20
+ "position_embedding_type": "absolute",
21
+ "torch_dtype": "float32",
22
+ "transformers_version": "4.28.1",
23
+ "type_vocab_size": 2,
24
+ "use_cache": true,
25
+ "vocab_size": 28895
26
+ }
pytorch_model.bin ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:b8767072a7c2be76bd349db50a11fa6effdea4202d6c937f9ad2529fb9bde6f7
3
+ size 1334166649
runs/Apr28_19-31-49_a2c09e058ed0/1682710366.2722716/events.out.tfevents.1682710366.a2c09e058ed0.3363.1 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e78d6379c6009d09902f2bf8e498d0513140e95a3e17a06c3d5f4f5966a0a2fc
3
+ size 5865
runs/Apr28_19-31-49_a2c09e058ed0/events.out.tfevents.1682710366.a2c09e058ed0.3363.0 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:5bed03a1980a2c891d35cc68cf39fee9560c6ea2fe67729572e03950c04a6cc5
3
+ size 4199
runs/Apr28_19-36-42_a2c09e058ed0/1682710615.8630085/events.out.tfevents.1682710615.a2c09e058ed0.5119.1 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:5e719dda6de93cebdf15b41d86e2bf86606317c9204e9a05bc4f4274580d42d1
3
+ size 5865
runs/Apr28_19-36-42_a2c09e058ed0/1682710638.8357685/events.out.tfevents.1682710638.a2c09e058ed0.5119.2 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:2c518f54963934ead7474748c8267733e7234a5e60a4dec827e3c852bf15a9fe
3
+ size 5865
runs/Apr28_19-36-42_a2c09e058ed0/events.out.tfevents.1682710615.a2c09e058ed0.5119.0 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:6bca606e4530afa7f6b3427accd8cb0cf8c9bce1da40e81cbb94a291f438d88f
3
+ size 8101
runs/Apr28_19-38-28_a2c09e058ed0/1682710725.5104136/events.out.tfevents.1682710725.a2c09e058ed0.5119.4 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:d9c314a502e47af60bef0f182bb71ca06cf3062fd6745b16a93359d2cf650c93
3
+ size 5865
runs/Apr28_19-38-28_a2c09e058ed0/events.out.tfevents.1682710725.a2c09e058ed0.5119.3 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:00d9d3db59d526d70578dabec8057432b37e28377fda6fa7bb2180a8aef024cf
3
+ size 4199
runs/Apr28_19-43-27_a2c09e058ed0/1682711021.8858526/events.out.tfevents.1682711021.a2c09e058ed0.7036.1 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:766d1436fa785932e471186a249afb3301d9ddd102890bea5f6abe1de3cb8b0e
3
+ size 5865
runs/Apr28_19-43-27_a2c09e058ed0/events.out.tfevents.1682711021.a2c09e058ed0.7036.0 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:abf3dfd160b3c6206805d7b6b658f3f2cb7455fa2ca1504dc142083dae903e70
3
+ size 297
special_tokens_map.json ADDED
@@ -0,0 +1,7 @@
 
 
 
 
 
 
 
 
1
+ {
2
+ "cls_token": "[CLS]",
3
+ "mask_token": "[MASK]",
4
+ "pad_token": "[PAD]",
5
+ "sep_token": "[SEP]",
6
+ "unk_token": "[UNK]"
7
+ }
tokenizer.json ADDED
The diff for this file is too large to render. See raw diff
 
tokenizer_config.json ADDED
@@ -0,0 +1,15 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "clean_up_tokenization_spaces": true,
3
+ "cls_token": "[CLS]",
4
+ "do_basic_tokenize": true,
5
+ "do_lower_case": true,
6
+ "mask_token": "[MASK]",
7
+ "model_max_length": 1000000000000000019884624838656,
8
+ "never_split": null,
9
+ "pad_token": "[PAD]",
10
+ "sep_token": "[SEP]",
11
+ "strip_accents": null,
12
+ "tokenize_chinese_chars": true,
13
+ "tokenizer_class": "BertTokenizer",
14
+ "unk_token": "[UNK]"
15
+ }
training_args.bin ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:a707022cd510a4c42253cf93b3d8eb85cf2ac3f89bb4c1605c2e9f0743c88987
3
+ size 3579
vocab.txt ADDED
The diff for this file is too large to render. See raw diff