| { | |
| "_name_or_path": "Javtor/biomedical-topic-categorization-2022only", | |
| "architectures": [ | |
| "BertForSequenceClassification" | |
| ], | |
| "attention_probs_dropout_prob": 0.1, | |
| "classifier_dropout": null, | |
| "gradient_checkpointing": false, | |
| "hidden_act": "gelu", | |
| "hidden_dropout_prob": 0.1, | |
| "hidden_size": 1024, | |
| "id2label": { | |
| "0": "T001 - Organism", | |
| "1": "T002 - Plant", | |
| "2": "T004 - Fungus", | |
| "3": "T005 - Virus", | |
| "4": "T007 - Bacterium", | |
| "5": "T008 - Animal", | |
| "6": "T010 - Vertebrate", | |
| "7": "T011 - Amphibian", | |
| "8": "T012 - Bird", | |
| "9": "T013 - Fish", | |
| "10": "T014 - Reptile", | |
| "11": "T015 - Mammal", | |
| "12": "T016 - Human", | |
| "13": "T017 - Anatomical Structure", | |
| "14": "T018 - Embryonic Structure", | |
| "15": "T019 - Congenital Abnormality", | |
| "16": "T020 - Acquired Abnormality", | |
| "17": "T022 - Body System", | |
| "18": "T023 - Body Part, Organ, or Organ Component", | |
| "19": "T024 - Tissue", | |
| "20": "T025 - Cell", | |
| "21": "T026 - Cell Component", | |
| "22": "T028 - Gene or Genome", | |
| "23": "T029 - Body Location or Region", | |
| "24": "T030 - Body Space or Junction", | |
| "25": "T031 - Body Substance", | |
| "26": "T032 - Organism Attribute", | |
| "27": "T033 - Finding", | |
| "28": "T034 - Laboratory or Test Result", | |
| "29": "T037 - Injury or Poisoning", | |
| "30": "T038 - Biologic Function", | |
| "31": "T039 - Physiologic Function", | |
| "32": "T040 - Organism Function", | |
| "33": "T041 - Mental Process", | |
| "34": "T042 - Organ or Tissue Function", | |
| "35": "T043 - Cell Function", | |
| "36": "T044 - Molecular Function", | |
| "37": "T045 - Genetic Function", | |
| "38": "T046 - Pathologic Function", | |
| "39": "T047 - Disease or Syndrome", | |
| "40": "T048 - Mental or Behavioral Dysfunction", | |
| "41": "T049 - Cell or Molecular Dysfunction", | |
| "42": "T050 - Experimental Model of Disease", | |
| "43": "T051 - Event", | |
| "44": "T052 - Activity", | |
| "45": "T053 - Behavior", | |
| "46": "T054 - Social Behavior", | |
| "47": "T055 - Individual Behavior", | |
| "48": "T056 - Daily or Recreational Activity", | |
| "49": "T057 - Occupational Activity", | |
| "50": "T058 - Health Care Activity", | |
| "51": "T059 - Laboratory Procedure", | |
| "52": "T060 - Diagnostic Procedure", | |
| "53": "T061 - Therapeutic or Preventive Procedure", | |
| "54": "T062 - Research Activity", | |
| "55": "T063 - Molecular Biology Research Technique", | |
| "56": "T064 - Governmental or Regulatory Activity", | |
| "57": "T065 - Educational Activity", | |
| "58": "T066 - Machine Activity", | |
| "59": "T067 - Phenomenon or Process", | |
| "60": "T068 - Human-caused Phenomenon or Process", | |
| "61": "T069 - Environmental Effect of Humans", | |
| "62": "T070 - Natural Phenomenon or Process", | |
| "63": "T071 - Entity", | |
| "64": "T072 - Physical Object", | |
| "65": "T073 - Manufactured Object", | |
| "66": "T074 - Medical Device", | |
| "67": "T075 - Research Device", | |
| "68": "T077 - Conceptual Entity", | |
| "69": "T078 - Idea or Concept", | |
| "70": "T079 - Temporal Concept", | |
| "71": "T080 - Qualitative Concept", | |
| "72": "T081 - Quantitative Concept", | |
| "73": "T082 - Spatial Concept", | |
| "74": "T083 - Geographic Area", | |
| "75": "T085 - Molecular Sequence", | |
| "76": "T086 - Nucleotide Sequence", | |
| "77": "T087 - Amino Acid Sequence", | |
| "78": "T089 - Regulation or Law", | |
| "79": "T090 - Occupation or Discipline", | |
| "80": "T091 - Biomedical Occupation or Discipline", | |
| "81": "T092 - Organization", | |
| "82": "T093 - Health Care Related Organization", | |
| "83": "T094 - Professional Society", | |
| "84": "T095 - Self-help or Relief Organization", | |
| "85": "T096 - Group", | |
| "86": "T097 - Professional or Occupational Group", | |
| "87": "T098 - Population Group", | |
| "88": "T099 - Family Group", | |
| "89": "T100 - Age Group", | |
| "90": "T101 - Patient or Disabled Group", | |
| "91": "T102 - Group Attribute", | |
| "92": "T103 - Chemical", | |
| "93": "T104 - Chemical Viewed Structurally", | |
| "94": "T109 - Organic Chemical", | |
| "95": "T114 - Nucleic Acid, Nucleoside, or Nucleotide", | |
| "96": "T116 - Amino Acid, Peptide, or Protein", | |
| "97": "T120 - Chemical Viewed Functionally", | |
| "98": "T121 - Pharmacologic Substance", | |
| "99": "T122 - Biomedical or Dental Material", | |
| "100": "T123 - Biologically Active Substance", | |
| "101": "T125 - Hormone", | |
| "102": "T126 - Enzyme", | |
| "103": "T127 - Vitamin", | |
| "104": "T129 - Immunologic Factor", | |
| "105": "T130 - Indicator, Reagent, or Diagnostic Aid", | |
| "106": "T131 - Hazardous or Poisonous Substance", | |
| "107": "T167 - Substance", | |
| "108": "T168 - Food", | |
| "109": "T169 - Functional Concept", | |
| "110": "T170 - Intellectual Product", | |
| "111": "T171 - Language", | |
| "112": "T184 - Sign or Symptom", | |
| "113": "T185 - Classification", | |
| "114": "T190 - Anatomical Abnormality", | |
| "115": "T191 - Neoplastic Process", | |
| "116": "T192 - Receptor", | |
| "117": "T194 - Archaeon", | |
| "118": "T195 - Antibiotic", | |
| "119": "T196 - Element, Ion, or Isotope", | |
| "120": "T197 - Inorganic Chemical", | |
| "121": "T200 - Clinical Drug", | |
| "122": "T201 - Clinical Attribute", | |
| "123": "T204 - Eukaryote" | |
| }, | |
| "initializer_range": 0.02, | |
| "intermediate_size": 4096, | |
| "label2id": { | |
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| "T002 - Plant": 1, | |
| "T004 - Fungus": 2, | |
| "T005 - Virus": 3, | |
| "T007 - Bacterium": 4, | |
| "T008 - Animal": 5, | |
| "T010 - Vertebrate": 6, | |
| "T011 - Amphibian": 7, | |
| "T012 - Bird": 8, | |
| "T013 - Fish": 9, | |
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| "T020 - Acquired Abnormality": 16, | |
| "T022 - Body System": 17, | |
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| "T024 - Tissue": 19, | |
| "T025 - Cell": 20, | |
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| "T034 - Laboratory or Test Result": 28, | |
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| "T040 - Organism Function": 32, | |
| "T041 - Mental Process": 33, | |
| "T042 - Organ or Tissue Function": 34, | |
| "T043 - Cell Function": 35, | |
| "T044 - Molecular Function": 36, | |
| "T045 - Genetic Function": 37, | |
| "T046 - Pathologic Function": 38, | |
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| "T048 - Mental or Behavioral Dysfunction": 40, | |
| "T049 - Cell or Molecular Dysfunction": 41, | |
| "T050 - Experimental Model of Disease": 42, | |
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| "T054 - Social Behavior": 46, | |
| "T055 - Individual Behavior": 47, | |
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| "T057 - Occupational Activity": 49, | |
| "T058 - Health Care Activity": 50, | |
| "T059 - Laboratory Procedure": 51, | |
| "T060 - Diagnostic Procedure": 52, | |
| "T061 - Therapeutic or Preventive Procedure": 53, | |
| "T062 - Research Activity": 54, | |
| "T063 - Molecular Biology Research Technique": 55, | |
| "T064 - Governmental or Regulatory Activity": 56, | |
| "T065 - Educational Activity": 57, | |
| "T066 - Machine Activity": 58, | |
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| "T068 - Human-caused Phenomenon or Process": 60, | |
| "T069 - Environmental Effect of Humans": 61, | |
| "T070 - Natural Phenomenon or Process": 62, | |
| "T071 - Entity": 63, | |
| "T072 - Physical Object": 64, | |
| "T073 - Manufactured Object": 65, | |
| "T074 - Medical Device": 66, | |
| "T075 - Research Device": 67, | |
| "T077 - Conceptual Entity": 68, | |
| "T078 - Idea or Concept": 69, | |
| "T079 - Temporal Concept": 70, | |
| "T080 - Qualitative Concept": 71, | |
| "T081 - Quantitative Concept": 72, | |
| "T082 - Spatial Concept": 73, | |
| "T083 - Geographic Area": 74, | |
| "T085 - Molecular Sequence": 75, | |
| "T086 - Nucleotide Sequence": 76, | |
| "T087 - Amino Acid Sequence": 77, | |
| "T089 - Regulation or Law": 78, | |
| "T090 - Occupation or Discipline": 79, | |
| "T091 - Biomedical Occupation or Discipline": 80, | |
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| "T093 - Health Care Related Organization": 82, | |
| "T094 - Professional Society": 83, | |
| "T095 - Self-help or Relief Organization": 84, | |
| "T096 - Group": 85, | |
| "T097 - Professional or Occupational Group": 86, | |
| "T098 - Population Group": 87, | |
| "T099 - Family Group": 88, | |
| "T100 - Age Group": 89, | |
| "T101 - Patient or Disabled Group": 90, | |
| "T102 - Group Attribute": 91, | |
| "T103 - Chemical": 92, | |
| "T104 - Chemical Viewed Structurally": 93, | |
| "T109 - Organic Chemical": 94, | |
| "T114 - Nucleic Acid, Nucleoside, or Nucleotide": 95, | |
| "T116 - Amino Acid, Peptide, or Protein": 96, | |
| "T120 - Chemical Viewed Functionally": 97, | |
| "T121 - Pharmacologic Substance": 98, | |
| "T122 - Biomedical or Dental Material": 99, | |
| "T123 - Biologically Active Substance": 100, | |
| "T125 - Hormone": 101, | |
| "T126 - Enzyme": 102, | |
| "T127 - Vitamin": 103, | |
| "T129 - Immunologic Factor": 104, | |
| "T130 - Indicator, Reagent, or Diagnostic Aid": 105, | |
| "T131 - Hazardous or Poisonous Substance": 106, | |
| "T167 - Substance": 107, | |
| "T168 - Food": 108, | |
| "T169 - Functional Concept": 109, | |
| "T170 - Intellectual Product": 110, | |
| "T171 - Language": 111, | |
| "T184 - Sign or Symptom": 112, | |
| "T185 - Classification": 113, | |
| "T190 - Anatomical Abnormality": 114, | |
| "T191 - Neoplastic Process": 115, | |
| "T192 - Receptor": 116, | |
| "T194 - Archaeon": 117, | |
| "T195 - Antibiotic": 118, | |
| "T196 - Element, Ion, or Isotope": 119, | |
| "T197 - Inorganic Chemical": 120, | |
| "T200 - Clinical Drug": 121, | |
| "T201 - Clinical Attribute": 122, | |
| "T204 - Eukaryote": 123 | |
| }, | |
| "layer_norm_eps": 1e-12, | |
| "max_position_embeddings": 512, | |
| "model_type": "bert", | |
| "num_attention_heads": 16, | |
| "num_hidden_layers": 24, | |
| "pad_token_id": 0, | |
| "position_embedding_type": "absolute", | |
| "problem_type": "multi_label_classification", | |
| "torch_dtype": "float32", | |
| "transformers_version": "4.23.1", | |
| "type_vocab_size": 2, | |
| "use_cache": true, | |
| "vocab_size": 28895 | |
| } | |