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nucleotide-transformer-v2-50m-3mer-multi-species

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PyTorch
esm
DNA
biology
genomics
custom_code
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sboshar commited on
Commit
864cc9f
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1 Parent(s): 340b3d7

Upload tokenizer

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Files changed (3) hide show
  1. special_tokens_map.json +6 -0
  2. tokenizer_config.json +6 -0
  3. vocab.txt +75 -0
special_tokens_map.json ADDED
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+ {
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+ "cls_token": "<cls>",
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+ "mask_token": "<mask>",
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+ "pad_token": "<pad>",
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+ "unk_token": "<unk>"
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+ }
tokenizer_config.json ADDED
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+ {
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+ "clean_up_tokenization_spaces": true,
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+ "eos_token": null,
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+ "model_max_length": 2048,
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+ "tokenizer_class": "EsmTokenizer"
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+ }
vocab.txt ADDED
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+ <unk>
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+ <pad>
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+ <mask>
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+ <cls>
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+ <eos>
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+ <bos>
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+ AAA
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+ AAT
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+ AAC
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+ AAG
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+ ATA
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+ ATT
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+ ATC
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+ ATG
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+ ACA
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+ ACT
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+ ACC
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+ ACG
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+ AGA
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+ AGT
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+ AGC
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+ AGG
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+ TAA
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+ TAT
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+ TAC
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+ TAG
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+ TTA
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+ TTT
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+ TTC
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+ TTG
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+ TCA
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+ TCT
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+ TCC
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+ TCG
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+ TGA
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+ TGT
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+ TGC
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+ TGG
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+ CAA
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+ CAT
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+ CAC
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+ CAG
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+ CTA
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+ CTT
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+ CTC
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+ CTG
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+ CCA
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+ CCT
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+ CCC
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+ CCG
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+ CGA
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+ CGT
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+ CGC
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+ CGG
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+ GAA
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+ GAT
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+ GAC
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+ GAG
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+ GTA
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+ GTT
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+ GTC
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+ GTG
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+ GCA
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+ GCT
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+ GCC
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+ GCG
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+ GGA
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+ GGT
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+ GGC
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+ GGG
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+ A
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+ T
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+ C
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+ G
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+ N