Seq-TransfoRNA / kba_pipeline /environment.yml
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name: hbdx_kba
channels:
- bioconda
- conda-forge
dependencies:
- anndata=0.8.0
- bedtools=2.30.0
- biopython=1.79
- bowtie=1.3.1
- joblib>=1.2.0
- pyfastx=0.8.4
- pytest
- python=3.10.6
- pyyaml
- rich
- samtools=1.16.1
- tqdm
- viennarna=2.5.1
- levenshtein
- pip