Dr. Jorge Abreu Vicente commited on
Commit
2ad87e5
1 Parent(s): 8b936ef

End of training

Browse files
Files changed (21) hide show
  1. .gitignore +1 -0
  2. config.json +41 -0
  3. pytorch_model.bin +3 -0
  4. runs/Aug10_13-19-52_361e346b2861/1660137776.1423857/events.out.tfevents.1660137776.361e346b2861.469.1 +3 -0
  5. runs/Aug10_13-19-52_361e346b2861/events.out.tfevents.1660137776.361e346b2861.469.0 +3 -0
  6. runs/Aug10_13-19-52_361e346b2861/losses_main_loss_eval/events.out.tfevents.1660139302.361e346b2861.469.5 +3 -0
  7. runs/Aug10_13-19-52_361e346b2861/losses_main_loss_train/events.out.tfevents.1660137785.361e346b2861.469.2 +3 -0
  8. runs/Aug10_13-19-52_361e346b2861/other_data_epoch_epoch/events.out.tfevents.1660137785.361e346b2861.469.4 +3 -0
  9. runs/Aug10_13-19-52_361e346b2861/other_data_eval_accuracy_score_eval_accuracy_score/events.out.tfevents.1660139302.361e346b2861.469.6 +3 -0
  10. runs/Aug10_13-19-52_361e346b2861/other_data_eval_f1_eval_f1/events.out.tfevents.1660139302.361e346b2861.469.9 +3 -0
  11. runs/Aug10_13-19-52_361e346b2861/other_data_eval_precision_eval_precision/events.out.tfevents.1660139302.361e346b2861.469.7 +3 -0
  12. runs/Aug10_13-19-52_361e346b2861/other_data_eval_recall_eval_recall/events.out.tfevents.1660139302.361e346b2861.469.8 +3 -0
  13. runs/Aug10_13-19-52_361e346b2861/other_data_eval_runtime_eval_runtime/events.out.tfevents.1660139302.361e346b2861.469.10 +3 -0
  14. runs/Aug10_13-19-52_361e346b2861/other_data_eval_samples_per_second_eval_samples_per_second/events.out.tfevents.1660139302.361e346b2861.469.11 +3 -0
  15. runs/Aug10_13-19-52_361e346b2861/other_data_eval_steps_per_second_eval_steps_per_second/events.out.tfevents.1660139302.361e346b2861.469.12 +3 -0
  16. runs/Aug10_13-19-52_361e346b2861/other_data_learning_rate_learning_rate/events.out.tfevents.1660137785.361e346b2861.469.3 +3 -0
  17. runs/Aug10_13-19-52_361e346b2861/other_data_train_loss_train_loss/events.out.tfevents.1660140828.361e346b2861.469.16 +3 -0
  18. runs/Aug10_13-19-52_361e346b2861/other_data_train_runtime_train_runtime/events.out.tfevents.1660140828.361e346b2861.469.13 +3 -0
  19. runs/Aug10_13-19-52_361e346b2861/other_data_train_samples_per_second_train_samples_per_second/events.out.tfevents.1660140828.361e346b2861.469.14 +3 -0
  20. runs/Aug10_13-19-52_361e346b2861/other_data_train_steps_per_second_train_steps_per_second/events.out.tfevents.1660140828.361e346b2861.469.15 +3 -0
  21. training_args.bin +3 -0
.gitignore ADDED
@@ -0,0 +1 @@
 
1
+ checkpoint-*/
config.json ADDED
@@ -0,0 +1,41 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "_name_or_path": "michiyasunaga/BioLinkBERT-large",
3
+ "architectures": [
4
+ "BertForTokenClassification"
5
+ ],
6
+ "attention_probs_dropout_prob": 0.1,
7
+ "classifier_dropout": null,
8
+ "gradient_checkpointing": false,
9
+ "hidden_act": "gelu",
10
+ "hidden_dropout_prob": 0.1,
11
+ "hidden_size": 1024,
12
+ "id2label": {
13
+ "0": "O",
14
+ "1": "B-CONTROLLED_VAR",
15
+ "2": "I-CONTROLLED_VAR",
16
+ "3": "B-MEASURED_VAR",
17
+ "4": "I-MEASURED_VAR"
18
+ },
19
+ "initializer_range": 0.02,
20
+ "intermediate_size": 4096,
21
+ "label2id": {
22
+ "B-CONTROLLED_VAR": 1,
23
+ "B-MEASURED_VAR": 3,
24
+ "I-CONTROLLED_VAR": 2,
25
+ "I-MEASURED_VAR": 4,
26
+ "O": 0
27
+ },
28
+ "layer_norm_eps": 1e-12,
29
+ "max_length": 512,
30
+ "max_position_embeddings": 512,
31
+ "model_type": "bert",
32
+ "num_attention_heads": 16,
33
+ "num_hidden_layers": 24,
34
+ "pad_token_id": 0,
35
+ "position_embedding_type": "absolute",
36
+ "torch_dtype": "float32",
37
+ "transformers_version": "4.15.0",
38
+ "type_vocab_size": 2,
39
+ "use_cache": true,
40
+ "vocab_size": 28895
41
+ }
pytorch_model.bin ADDED
@@ -0,0 +1,3 @@
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:a2ac3dbf0c9b18f04d1e1c5f75534112c51e2f075aeb50690d3ebd0a4089174b
3
+ size 1329886385
runs/Aug10_13-19-52_361e346b2861/1660137776.1423857/events.out.tfevents.1660137776.361e346b2861.469.1 ADDED
@@ -0,0 +1,3 @@
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:6e6d3e9999cac741a0a8d450c3b4686069c269127c9e651cdcbc7e36aaa54832
3
+ size 5022
runs/Aug10_13-19-52_361e346b2861/events.out.tfevents.1660137776.361e346b2861.469.0 ADDED
@@ -0,0 +1,3 @@
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:3226ed3d160a287a46b10b78d33eb3ba0622cbb6e12c4a1921ab48991ced4fc4
3
+ size 3749
runs/Aug10_13-19-52_361e346b2861/losses_main_loss_eval/events.out.tfevents.1660139302.361e346b2861.469.5 ADDED
@@ -0,0 +1,3 @@
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e1bfd1ad937231610cc109a23a39b85894790d231c6c02afebf94cc8e976d0a3
3
+ size 150
runs/Aug10_13-19-52_361e346b2861/losses_main_loss_train/events.out.tfevents.1660137785.361e346b2861.469.2 ADDED
@@ -0,0 +1,3 @@
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e1ac13d2c5e643405852d13eb46b8eecfdd1c5748e7c8a45bae6c7c78bba2272
3
+ size 2348
runs/Aug10_13-19-52_361e346b2861/other_data_epoch_epoch/events.out.tfevents.1660137785.361e346b2861.469.4 ADDED
@@ -0,0 +1,3 @@
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:2ebd3b09f909dcf6bf8d51cea69c230bd24195217ca89f001171e2d8143973b7
3
+ size 2513
runs/Aug10_13-19-52_361e346b2861/other_data_eval_accuracy_score_eval_accuracy_score/events.out.tfevents.1660139302.361e346b2861.469.6 ADDED
@@ -0,0 +1,3 @@
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:6a93b917f189510dffe5166f5c94693e9b789ff0df4e5388c0f238682ea850c4
3
+ size 178
runs/Aug10_13-19-52_361e346b2861/other_data_eval_f1_eval_f1/events.out.tfevents.1660139302.361e346b2861.469.9 ADDED
@@ -0,0 +1,3 @@
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:29cd234898c868794a1e96563560c67b0a25bfc5fbd56792770915bcafc65af6
3
+ size 154
runs/Aug10_13-19-52_361e346b2861/other_data_eval_precision_eval_precision/events.out.tfevents.1660139302.361e346b2861.469.7 ADDED
@@ -0,0 +1,3 @@
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:d90121f56a8ee4ecb52fe3372a4b8c476ccae80f57fa0035b637c1885985d4b0
3
+ size 168
runs/Aug10_13-19-52_361e346b2861/other_data_eval_recall_eval_recall/events.out.tfevents.1660139302.361e346b2861.469.8 ADDED
@@ -0,0 +1,3 @@
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:11734aae25d7a835ab724c1d03f69fa2e2724e7d542c134bf09ed33beb6ebb14
3
+ size 162
runs/Aug10_13-19-52_361e346b2861/other_data_eval_runtime_eval_runtime/events.out.tfevents.1660139302.361e346b2861.469.10 ADDED
@@ -0,0 +1,3 @@
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:af3f8edbd5e33f55e869726f81eeec0052ec857ab638c0990edfd2ad13ea04c7
3
+ size 164
runs/Aug10_13-19-52_361e346b2861/other_data_eval_samples_per_second_eval_samples_per_second/events.out.tfevents.1660139302.361e346b2861.469.11 ADDED
@@ -0,0 +1,3 @@
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:29e41352d52276618376d1ccfc1c15c9667602f6ec6a8f3616e9405b245a61e0
3
+ size 186
runs/Aug10_13-19-52_361e346b2861/other_data_eval_steps_per_second_eval_steps_per_second/events.out.tfevents.1660139302.361e346b2861.469.12 ADDED
@@ -0,0 +1,3 @@
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:1ebaefe6a1dd7ac7d837d4cc999060701916a45a63789f25156e6824bfe89774
3
+ size 182
runs/Aug10_13-19-52_361e346b2861/other_data_learning_rate_learning_rate/events.out.tfevents.1660137785.361e346b2861.469.3 ADDED
@@ -0,0 +1,3 @@
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:6a689e9c3cff03a4488c4ebf96d51e12c3d6309ae1d02c1ecc0dde4bbf556f0b
3
+ size 2684
runs/Aug10_13-19-52_361e346b2861/other_data_train_loss_train_loss/events.out.tfevents.1660140828.361e346b2861.469.16 ADDED
@@ -0,0 +1,3 @@
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:95210a089572680247f5cea8972d6fd8e931417ec5067fa3982a74a2aac513cb
3
+ size 100
runs/Aug10_13-19-52_361e346b2861/other_data_train_runtime_train_runtime/events.out.tfevents.1660140828.361e346b2861.469.13 ADDED
@@ -0,0 +1,3 @@
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:a52901a551726917aa80ef4867c15447d327b1efbe2a519627fdeff8ea9c51f7
3
+ size 103
runs/Aug10_13-19-52_361e346b2861/other_data_train_samples_per_second_train_samples_per_second/events.out.tfevents.1660140828.361e346b2861.469.14 ADDED
@@ -0,0 +1,3 @@
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ca6312766f1355bc784c8e8bb3eafe6deab1cee8fd3687fb623219f49c215f10
3
+ size 114
runs/Aug10_13-19-52_361e346b2861/other_data_train_steps_per_second_train_steps_per_second/events.out.tfevents.1660140828.361e346b2861.469.15 ADDED
@@ -0,0 +1,3 @@
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:9cd13ee7bcd7f978f97f40235b138a38da3e43ad285d61ccb8e6cbbdbf1a3059
3
+ size 112
training_args.bin ADDED
@@ -0,0 +1,3 @@
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:6d97870817464c3e70bf14e8f4b1eff42ea76e1118025207559c0b9f5e62bdfc
3
+ size 3183