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Model-demo-35M.zip +2 -2
README.md +28 -184
adapter_config.json +2 -2
adapter_model.safetensors +2 -2

Model-demo-35M.zip CHANGED Viewed

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README.md CHANGED Viewed

@@ -1,202 +1,46 @@
----
-base_model: westlake-repl/SaProt_35M_AF2
-library_name: peft
----
-# Model Card for Model ID
-This model is used for a demo classification task
-## Model Details
-### Model Description
-<!-- Provide a longer summary of what this model is. -->
-- **Developed by:** [More Information Needed]
-- **Funded by [optional]:** [More Information Needed]
-- **Shared by [optional]:** [More Information Needed]
-- **Model type:** [More Information Needed]
-- **Language(s) (NLP):** [More Information Needed]
-- **License:** [More Information Needed]
-- **Finetuned from model [optional]:** [More Information Needed]
-### Model Sources [optional]
-<!-- Provide the basic links for the model. -->
-- **Repository:** [More Information Needed]
-- **Paper [optional]:** [More Information Needed]
-- **Demo [optional]:** [More Information Needed]
-## Uses
-<!-- Address questions around how the model is intended to be used, including the foreseeable users of the model and those affected by the model. -->
-### Direct Use
-<!-- This section is for the model use without fine-tuning or plugging into a larger ecosystem/app. -->
-[More Information Needed]
-### Downstream Use [optional]
-<!-- This section is for the model use when fine-tuned for a task, or when plugged into a larger ecosystem/app -->
-[More Information Needed]
-### Out-of-Scope Use
-<!-- This section addresses misuse, malicious use, and uses that the model will not work well for. -->
-[More Information Needed]
-## Bias, Risks, and Limitations
-<!-- This section is meant to convey both technical and sociotechnical limitations. -->
-[More Information Needed]
-### Recommendations
-<!-- This section is meant to convey recommendations with respect to the bias, risk, and technical limitations. -->
-Users (both direct and downstream) should be made aware of the risks, biases and limitations of the model. More information needed for further recommendations.
-## How to Get Started with the Model
-Use the code below to get started with the model.
-[More Information Needed]
-## Training Details
-### Training Data
-<!-- This should link to a Dataset Card, perhaps with a short stub of information on what the training data is all about as well as documentation related to data pre-processing or additional filtering. -->
-[More Information Needed]
-### Training Procedure
-<!-- This relates heavily to the Technical Specifications. Content here should link to that section when it is relevant to the training procedure. -->
-#### Preprocessing [optional]
-[More Information Needed]
-#### Training Hyperparameters
-- **Training regime:** [More Information Needed] <!--fp32, fp16 mixed precision, bf16 mixed precision, bf16 non-mixed precision, fp16 non-mixed precision, fp8 mixed precision -->
-#### Speeds, Sizes, Times [optional]
-<!-- This section provides information about throughput, start/end time, checkpoint size if relevant, etc. -->
-[More Information Needed]
-## Evaluation
-<!-- This section describes the evaluation protocols and provides the results. -->
-### Testing Data, Factors & Metrics
-#### Testing Data
-<!-- This should link to a Dataset Card if possible. -->
-[More Information Needed]
-#### Factors
-<!-- These are the things the evaluation is disaggregating by, e.g., subpopulations or domains. -->
-[More Information Needed]
-#### Metrics
-<!-- These are the evaluation metrics being used, ideally with a description of why. -->
-[More Information Needed]
-### Results
-[More Information Needed]
-#### Summary
-## Model Examination [optional]
-<!-- Relevant interpretability work for the model goes here -->
-[More Information Needed]
-## Environmental Impact
-<!-- Total emissions (in grams of CO2eq) and additional considerations, such as electricity usage, go here. Edit the suggested text below accordingly -->
-Carbon emissions can be estimated using the [Machine Learning Impact calculator](https://mlco2.github.io/impact#compute) presented in [Lacoste et al. (2019)](https://arxiv.org/abs/1910.09700).
-- **Hardware Type:** [More Information Needed]
-- **Hours used:** [More Information Needed]
-- **Cloud Provider:** [More Information Needed]
-- **Compute Region:** [More Information Needed]
-- **Carbon Emitted:** [More Information Needed]
-## Technical Specifications [optional]
-### Model Architecture and Objective
-[More Information Needed]
-### Compute Infrastructure
-[More Information Needed]
-#### Hardware
-[More Information Needed]
-#### Software
-[More Information Needed]
-## Citation [optional]
-<!-- If there is a paper or blog post introducing the model, the APA and Bibtex information for that should go in this section. -->
-**BibTeX:**
-[More Information Needed]
-**APA:**
-[More Information Needed]
-## Glossary [optional]
-<!-- If relevant, include terms and calculations in this section that can help readers understand the model or model card. -->
-[More Information Needed]
-## More Information [optional]
-[More Information Needed]
-## Model Card Authors [optional]
-[More Information Needed]
-## Model Card Contact
-[More Information Needed]
-### Framework versions
-- PEFT 0.10.0

+---
+base_model: westlake-repl/SaProt_35M_AF2
+library_name: peft
+---
+# Model Card for Model-demo-35M
+This model is used for a demo classification task
+## Task type
+Protein-level Classification
+## Model input type
+SA Sequence
+## Label meanings
+0: A
+1: B
+## LoRA config
+- **r:** 8
+- **lora_dropout:** 0.0
+- **lora_alpha:** 16
+- **target_modules:** ['value', 'intermediate.dense', 'key', 'query', 'output.dense']
+- **modules_to_save:** ['classifier']
+## Training config
+- **optimizer:**
+  - **class:** AdamW
+  - **betas:** (0.9, 0.98)
+  - **weight_decay:** 0.01
+- **learning rate:** 0.001
+- **epoch:** 1
+- **batch size:** 2
+- **precision:** 16-mixed

adapter_config.json CHANGED Viewed

@@ -23,10 +23,10 @@
   "revision": null,
   "target_modules": [
     "value",
     "key",
     "query",
-    "output.dense",
-    "intermediate.dense"
   ],
   "task_type": "SEQ_CLS",
   "use_dora": false,

   "revision": null,
   "target_modules": [
     "value",
+    "intermediate.dense",
     "key",
     "query",
+    "output.dense"
   ],
   "task_type": "SEQ_CLS",
   "use_dora": false,

adapter_model.safetensors CHANGED Viewed

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