| source ~/proj_MONAI/bin/activate | |
| cd ~/DeepAtlas/deepatlas/preprocess | |
| python3 registration_test.py -op firstTest -bp ~/Test_data -template template -target_scan target -target_seg target_seg -sl 1 Ear 2 Mid 3 Nasal -ti Task001_SepET | |
| python3 crop_flip_test.py -rs 128 128 128 -fp -ti Task001_SepET -op firstTest | |
| cd ~/DeepAtlas/deepatlas/scripts | |
| python3 deep_atlas_test_customized.py -gpu 0 -ti Task001_SepET -op firstTest -nf 5 |