Commit
•
35cea74
1
Parent(s):
b83af74
Upload 11 files
Browse files- added_tokens.json +7 -0
- config (6).json +38 -0
- optimizer.pt +3 -0
- pytorch_model (2).bin +3 -0
- rng_state.pth +3 -0
- scheduler.pt +3 -0
- special_tokens_map.json +7 -0
- tokenizer_config.json +54 -0
- trainer_state.json +1293 -0
- training_args.bin +3 -0
- vocab.txt +33 -0
added_tokens.json
ADDED
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{
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"<cls>": 0,
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"<eos>": 2,
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"<mask>": 32,
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"<pad>": 1,
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"<unk>": 3
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}
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config (6).json
ADDED
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{
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"_name_or_path": "facebook/esm2_t6_8M_UR50D",
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"architectures": [
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"EsmForTokenClassification"
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],
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"attention_probs_dropout_prob": 0.5,
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"classifier_dropout": null,
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"emb_layer_norm_before": false,
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"esmfold_config": null,
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"hidden_act": "gelu",
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"hidden_dropout_prob": 0.5,
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"hidden_size": 320,
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"id2label": {
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"0": "No binding site",
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"1": "Binding site"
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},
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"initializer_range": 0.02,
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"intermediate_size": 1280,
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"is_folding_model": false,
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"label2id": {
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"Binding site": 1,
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"No binding site": 0
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},
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"layer_norm_eps": 1e-05,
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"mask_token_id": 32,
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"max_position_embeddings": 1026,
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"model_type": "esm",
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"num_attention_heads": 20,
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"num_hidden_layers": 6,
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"pad_token_id": 1,
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"position_embedding_type": "rotary",
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"token_dropout": true,
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"torch_dtype": "float32",
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"transformers_version": "4.34.0.dev0",
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"use_cache": true,
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"vocab_list": null,
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"vocab_size": 33
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}
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optimizer.pt
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version https://git-lfs.github.com/spec/v1
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oid sha256:ed01130202ab25bb28e408aff3d24b21e5262e7b557d9e0cd96d55cac4e0692a
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size 59361093
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pytorch_model (2).bin
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version https://git-lfs.github.com/spec/v1
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oid sha256:0a0e3863ebd00a136b483eb80d58882f03a47f08d7767b8a5158682fd7cc8c5c
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size 30989061
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rng_state.pth
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version https://git-lfs.github.com/spec/v1
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oid sha256:1a85c8f82e6ff59890e9b6b487c977f3ce1fcedec53eae378d17f83e2ecbb1a6
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size 14575
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scheduler.pt
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version https://git-lfs.github.com/spec/v1
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oid sha256:73eb32d30209f5b72ceb1037fc68aabd56fd23c02d2f88302d7a2c36d742bf16
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size 627
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special_tokens_map.json
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{
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"cls_token": "<cls>",
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"eos_token": "<eos>",
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"mask_token": "<mask>",
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"pad_token": "<pad>",
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"unk_token": "<unk>"
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}
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tokenizer_config.json
ADDED
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{
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"added_tokens_decoder": {
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"0": {
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"content": "<cls>",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"1": {
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"content": "<pad>",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"2": {
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"content": "<eos>",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"3": {
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"content": "<unk>",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"32": {
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"content": "<mask>",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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}
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},
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"additional_special_tokens": [],
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"clean_up_tokenization_spaces": true,
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"cls_token": "<cls>",
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"eos_token": "<eos>",
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"mask_token": "<mask>",
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"model_max_length": 1024,
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"pad_token": "<pad>",
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"tokenizer_class": "EsmTokenizer",
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"tokenizer_file": null,
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"unk_token": "<unk>"
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}
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trainer_state.json
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