#genome
stringclasses
121 values
asm_name
stringclasses
120 values
assembly_accession
stringclasses
120 values
bioproject
stringclasses
45 values
biosample
stringclasses
120 values
wgs_master
float64
seq_rel_date
stringclasses
98 values
submitter
stringclasses
76 values
ftp_path
stringclasses
120 values
img_id
float64
637M
2.51B
gtdb_id
stringclasses
120 values
scope
stringclasses
3 values
assembly_level
stringclasses
1 value
genome_rep
stringclasses
1 value
refseq_category
stringclasses
3 values
release_type
stringclasses
2 values
taxid
float64
1.15k
681k
species_taxid
float64
7
911k
organism_name
stringclasses
120 values
infraspecific_name
stringclasses
112 values
isolate
stringclasses
1 value
superkingdom
stringclasses
2 values
phylum
stringclasses
18 values
class
stringclasses
30 values
order
stringclasses
56 values
family
stringclasses
75 values
genus
stringclasses
89 values
species
stringclasses
117 values
classified
bool
1 class
lv1_group
stringclasses
2 values
lv2_group
stringclasses
13 values
score_faa
float64
0.93
1
score_fna
float64
0.88
1
score_rrna
float64
0.1
1
score_trna
float64
0.6
1
total_length
float64
618k
9.12M
contigs
float64
1
22
gc
float64
22.5
72.2
n50
float64
616k
9.03M
l50
float64
1
1
proteins
float64
525
7.92k
protein_length
float64
172k
2.68M
coding_density
float64
74
96.9
completeness
float64
76.3
100
contamination
float64
0
4.4
strain_heterogeneity
float64
0
100
markers
float64
124
383
5s_rrna
stringclasses
2 values
16s_rrna
stringclasses
1 value
23s_rrna
stringclasses
1 value
trnas
float64
14
20
draft_quality
stringclasses
2 values
start_position
int64
0
10M
human_label
int64
0
1
autotrain_text
stringlengths
150
150
autotrain_label
class label
121 classes
G000009705
ASM970v1
GCF_000009705.1
PRJNA224116
SAMD00061094
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1
637,000,199
RS_GCF_000009705.1
Monoisolate
Complete Genome
Full
representative genome
Major
103,690
103,690
Nostoc sp. PCC 7120
null
null
Bacteria
Cyanobacteria
null
Nostocales
Nostocaceae
Nostoc
Nostoc sp. PCC 7120
true
Eubacteria
Cyanobacteria
1
0.992
0.9
1
7,211,789
7
41.27
6,413,771
1
6,159
2,024,679
82.716938
99.19
0
0
360
yes
yes
yes
20
high
553,150
0
CCATCCTCGACCATTCTTCCCAAGGATTGGGAGGGGTGGGTACAGAATTTGGCTGTGCTAAAGGTGGTGGCGGTAGTTGGGGAATTGTAGAACTGGCTACTGGCATCGGTGCAGGTGGATAGGGATTTTGAGCAGGACGCTCAATAATCA
70Nostoc sp. PCC 7120 ASM970v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,514,000
1
TGGAGAAATGACTGATTCCAGATGCGGAACAAGAATATAGAAGATGGGCTGGGCACAGTGGCTCACTCCTGTAATCCCAGCACTTTGGGAGGCAGGGTTGGGAGGATCATTTAAGGCCAGGAGTTTGAGATCAGCCTGTGCAACAGAGCA
120homo sapiens
G000007145
ASM714v1
GCF_000007145.1
PRJNA57887
SAMN02603845
null
2002/05/24
Sao Paulo state (Brazil) Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/145/GCF_000007145.1_ASM714v1
637,000,344
RS_GCF_000007145.1
Monoisolate
Complete Genome
Full
reference genome
Major
190,485
339
Xanthomonas campestris pv. campestris str. ATCC 33913
strain=ATCC 33913
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xanthomonas
Xanthomonas campestris
true
Eubacteria
Proteobacteria
1
1
0.9
1
5,076,188
1
65.07
5,076,188
1
4,292
1,472,146
85.453159
99.64
0
0
358
yes
yes
yes
20
high
4,208,230
0
GAGTTCCTGCATCGCCACATCGCCCAGCGTGCCGTCGCTCTTCCAGTCCTTGGCAAAGCGCGTTTCCTGGTACTGCACCGGGTTGACCCGCTCCATCACGCTGCGCGTTTTGGCTGCCACGCGGGCGTCGTCCATGCCCGGCGGCACCGC
112Xanthomonas campestris pv. campestris str. ATCC 33913
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,734,400
1
ATGCCTCAGCCTTCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCAGAGTTTCACTCTTGTTGTCCAGGCTGGATTGCAATGTTGTGCTCTCCGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCTATTTTCCTGCCT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,502,600
1
CGTGTCCCCACCCTGTCCTGGAGCAGCAGCCCTGGCCCCACCCCCACCCCTCAGGATCGGGGCCAGCGACCCCTGCCAGGACTCTCTGTGCCTGGCACGAACGAGGCAACAGTGACCAGATGGTGCTGCCTTCTCAATCCAGGGGAACTA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,422,950
1
CCAAGTCCCCGTAGGAAGAGAGCAGACTTGAGATCTGAACTCCACTTACTGAAGGACTATTATGCAATAAAGGGAATAGACCTAGTCTTTGTGGCTCCAGAGATGAGGACGACTACAGAGAGCATTCCCAGGGAGGCCGAGGGCATCTCA
120homo sapiens
G000009705
ASM970v1
GCF_000009705.1
PRJNA224116
SAMD00061094
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1
637,000,199
RS_GCF_000009705.1
Monoisolate
Complete Genome
Full
representative genome
Major
103,690
103,690
Nostoc sp. PCC 7120
null
null
Bacteria
Cyanobacteria
null
Nostocales
Nostocaceae
Nostoc
Nostoc sp. PCC 7120
true
Eubacteria
Cyanobacteria
1
0.992
0.9
1
7,211,789
7
41.27
6,413,771
1
6,159
2,024,679
82.716938
99.19
0
0
360
yes
yes
yes
20
high
3,470,350
0
GGTGGTGTATTGTTCTAGCCGCTTGCCAATAGAATTCATTTTGAAAGCTGGAAATTTAGAACTGAAGCGCAGTGAGAGTTTACTGTGGTGTAGCCGAGCGTCCCTGCTTGCCCAGCTTTACGACGACAAAGTAGCTTAAATATAATACAT
70Nostoc sp. PCC 7120 ASM970v1
G000006725
ASM672v1
GCF_000006725.1
PRJNA224116
SAMN02603773
null
2004/06/04
Sao Paulo state (Brazil) Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/725/GCF_000006725.1_ASM672v1
637,000,348
RS_GCF_000006725.1
Monoisolate
Complete Genome
Full
representative genome
Major
160,492
2,371
Xylella fastidiosa 9a5c
null
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xylella
Xylella fastidiosa
true
Eubacteria
Proteobacteria
0.98
0.993
0.9
1
2,731,750
3
52.62
2,679,306
1
2,664
765,931
82.59299
99.59
0.18
0
325
yes
yes
yes
20
high
637,910
0
TGCCATGAGAATGATGTGTTCTTTTTAAGGGCGCAGCCATGTGCTCGGTCCGTCATGGTGGTTGCCTTTGTAGTGGTGGTCTGTGTGGATGGTATGCATGGTATCCCTCGCGATGCATCGATTGCGAGGGATTGTCATCAACACTTGAGA
114Xylella fastidiosa 9a5c
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,698,700
1
GAAAGCATGTTTGAGATCCAGAACAGAATAATGGGTTGTGGAGGGAGGTATTGAGGATAGGAGAGTATATGGGTTTGGCACCACGGGGTGGGTAGGCAAAACAATTTGGTTGATAAGGCACAGATCTTGAACTAACCTGTAAGCCTGGTC
120homo sapiens
G000008745
ASM874v1
GCF_000008745.1
PRJNA57811
SAMN02603115
null
1999/12/22
ChGP
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/745/GCF_000008745.1_ASM874v1
637,000,069
RS_GCF_000008745.1
Monoisolate
Complete Genome
Full
reference genome
Major
115,713
83,558
Chlamydophila pneumoniae CWL029
strain=CWL029
null
Bacteria
Chlamydiae
Chlamydiia
Chlamydiales
Chlamydiaceae
Chlamydia
Chlamydia pneumoniae
true
Eubacteria
Chlamydiae
1
1
0.9
1
1,230,230
1
40.58
1,230,230
1
1,063
373,983
89.578859
99.49
0
0
219
yes
yes
yes
20
high
442,780
0
AATCAAAACTTATTCGTATCCTCAAAGAGTTTCGAGACAACCGTTCGAGTGTTGCTGTTGTCCTCAATGCTTCTGGTGAACCTATAGGTATTCTTAGTTTAAATGCAATTTTCAAAATCTTATTCAACACTACAAACATTGCTCATTTAA
24Chlamydophila pneumoniae CWL029
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,910,900
1
AGGGGGCCCTGTCTGTGCCCAGTGCTGTTCCAGTGCGGGGGCCAGCCCTGAATAAAAGACCAGCTGTCTTTAGGAGGCTCGCACACCAATGGGAGGAGACAGGCAAGCCAGACAAGCAAGGTGGCAGGCACAGCTCTGGGTGCAGCGGTG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,778,400
1
GTGTGGTGATGTGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGTTGGAGGTTGCAGTGAGCAGAGATCATGCAACTGCACTCCAGCCTGGGTAACAGAGTGAGACCCTGTCTCAAA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
414,750
1
ATCGTTTGAGACGGAGTCTCACTCTGTCGCCCAGGCTGGATGGAGTGCAGTGGCTCCATCTCGGCTCACTACAACCTCCGCCTCCCGGGTTCCAGCGATTCTCCTGCCTCAGACTCCTGAGTAGCTGGGACCACAGGCGCCCACCGTGTC
120homo sapiens
G000009905
ASM990v1
GCF_000009905.1
PRJNA224116
SAMD00061067
null
2004/09/02
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/905/GCF_000009905.1_ASM990v1
637,000,306
RS_GCF_000009905.1
Monoisolate
Complete Genome
Full
representative genome
Major
292,459
2,734
Symbiobacterium thermophilum IAM 14863
strain=IAM14863
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Symbiobacteriaceae
Symbiobacterium
Symbiobacterium thermophilum
true
Eubacteria
Firmicutes
1
1
1
1
3,566,135
1
68.67
3,566,135
1
3,297
1,051,001
86.832243
98.02
0.03
0
347
yes
yes
yes
20
high
83,720
0
GCTCACGGCGCTCTTCCAGACCAGCGATCCGCTCGAGGGCGTCTGGGAGGTCGTGGTGGTCGCCCTGCCCCGGGAGGGGATGGCCGACGAGCCGGCCGAGTACGTCCTGCAGGTGCAGTCCGGGCCGGTGGTCGCCCCGGCGCCGCTGGC
99Symbiobacterium thermophilum IAM 14863 IAM14863
G000007525
ASM752v1
GCF_000007525.1
PRJNA57939
SAMN02603675
null
2005/01/21
Nestle Research Center, Switzerland
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/525/GCF_000007525.1_ASM752v1
637,000,031
RS_GCF_000007525.1
Monoisolate
Complete Genome
Full
reference genome
Major
206,672
216,816
Bifidobacterium longum NCC2705
strain=NCC2705
null
Bacteria
Actinobacteria
Actinobacteria
Bifidobacteriales
Bifidobacteriaceae
Bifidobacterium
Bifidobacterium longum
true
Eubacteria
Actinobacteria
1
0.996
0.9
1
2,260,266
2
60.13
2,256,640
1
1,833
667,063
86.967994
100
0
0
289
yes
yes
yes
20
high
632,580
0
TGTCGGTGATGCCGACCGGCGGCAGGGCACCGAGCATCACGTCGCGCACAAGACCGCCGCCGAGTGCGGTAAGCCATCCGCACAGCATGATGGTGAAGATGTCGTAGCCCTTGCGAATGGCGGCAAGTCCGCCCGATAATCCCCAACACA
13Bifidobacterium longum NCC2705
G000009705
ASM970v1
GCF_000009705.1
PRJNA224116
SAMD00061094
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1
637,000,199
RS_GCF_000009705.1
Monoisolate
Complete Genome
Full
representative genome
Major
103,690
103,690
Nostoc sp. PCC 7120
null
null
Bacteria
Cyanobacteria
null
Nostocales
Nostocaceae
Nostoc
Nostoc sp. PCC 7120
true
Eubacteria
Cyanobacteria
1
0.992
0.9
1
7,211,789
7
41.27
6,413,771
1
6,159
2,024,679
82.716938
99.19
0
0
360
yes
yes
yes
20
high
5,290,870
0
CAACATTTTGCAAAGCTGTTTCAAACGCCGCTAAACCGCTACTACTAGCCGCCGCCACATCACCTTTTAACCTGGCGCGTAAAGCAGGTAAAGCATCAACCCGATACAAATTACTGAATCCTGCTGGTAACTCAGCCCGGAAACTTTCTG
70Nostoc sp. PCC 7120 ASM970v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,777,750
1
GTAGATGCATAGGTAGGTAGACGATGAATGTATTAATAATAGATAGATGGACAGACAAACAGATAGAAAGAAAGCAAGGTAGATAATGCCTTTCAGAGAAAAGGAGAGAGAGCGAGAGGAATGCTGGACCAGAGTGTTGGGGGTGCAGTT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,269,250
1
AGGTGGCTCACGCCTGTAATCTCAGCACTTTGGGAGGCAGAGGTAGACAGATCCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGCGAAACCCCGTCTCTACTAAAAATACAACAAATTAGCCAGGCGTGGTGGTGGGTGCCTG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,300,000
1
CCCTGGAAGCCAGCACTCGCCCTTGGTCAGTGTGGCTGGTGAGTCCTAGTTACACTGGGTGTGGAGGAGACAGGTAGGGCTGGACTTGATAGACTCTGAACAGAGTTGGGGATGGGCTGATTACTCAGAGGACACCTCCTGCTTCGCCTG
120homo sapiens
G000008685
ASM868v2
GCF_000008685.2
PRJNA57581
SAMN02603966
null
2011/11/09
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/685/GCF_000008685.2_ASM868v2
637,000,036
RS_GCF_000008685.2
Monoisolate
Complete Genome
Full
reference genome
Major
224,326
139
Borrelia burgdorferi B31
strain=B31
null
Bacteria
Spirochaetes
Spirochaetia
Spirochaetales
Borreliaceae
Borreliella
Borreliella burgdorferi
true
Eubacteria
Spirochaetes
1
0.879
1
0.9
1,521,208
22
28.18
910,724
1
1,511
441,681
85.52361
100
0
0
178
yes
yes
yes
20
high
558,350
0
ATATCCAGCATTTCTTACGAAGTTTATTTGATTTATTATAAACTCTTTGATTTTTGGATAAGAATCAAAGTAAGAGTTTATAAATCCTTTTGCCTCTTCTTTTGTAATTCCCAGTTCTTTTGCAAGTCTAAAATCTGACATTCTATAAAT
14Borrelia burgdorferi B31
G000009245
ASM924v1
GCF_000009245.1
PRJNA224116
SAMEA3138197
null
2006/03/02
LLNL
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/245/GCF_000009245.1_ASM924v1
637,000,111
RS_GCF_000009245.1
Monoisolate
Complete Genome
Full
na
Major
376,619
263
Francisella tularensis subsp. holarctica LVS
strain=LVS
null
Bacteria
Proteobacteria
Gammaproteobacteria
Thiotrichales
Francisellaceae
Francisella
Francisella tularensis
true
Eubacteria
Proteobacteria
1
1
0.9
1
1,895,994
1
32.15
1,895,994
1
2,100
571,581
88.799806
99.82
0.41
100
311
yes
yes
yes
20
high
1,856,010
0
ATAAACTTATGTTGTAGTTGTATACTCTGCGGTCGTAAAAGACATACAAAGCCTTTCTTTGTCAGAATCACATGCCATAATTCCATCTCTGATAATATCATCACCTAATATATTTATGCTTGGATCAGTAGGGGCTATATGAGTAACTTT
40Francisella tularensis subsp. holarctica LVS ASM924v1
G000009725
ASM972v1
GCF_000009725.1
PRJNA224116
SAMD00061113
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/725/GCF_000009725.1_ASM972v1
2,514,885,032
RS_GCF_000009725.1
Monoisolate
Complete Genome
Full
representative genome
Major
1,148
1,148
Synechocystis sp. PCC 6803
strain=PCC 6803
null
Bacteria
Cyanobacteria
null
Synechococcales
Merismopediaceae
Synechocystis
Synechocystis sp. PCC 6803
true
Eubacteria
Cyanobacteria
1
0.99
0.9
1
3,947,019
5
47.37
3,573,470
1
3,713
1,164,101
86.890968
99.78
0
0
349
yes
yes
yes
20
high
2,925,650
0
ACGTTATTTTGCTGAGGGCAACAATGAGTATCCGGTAATTCCAGGGGTACCCATTGATCCTGTGCTAGCCGCCCATGGCCAACTAAAAGGAGACCCCCTCAATGTTTCTAACTTGGGACGTTACCAACCCGATTCAGCTCGTTTAATGAA
101Synechocystis sp. PCC 6803 ASM972v1
G000009865
ASM986v1
GCF_000009865.1
PRJNA224116
SAMD00061066
null
2005/06/30
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/865/GCF_000009865.1_ASM986v1
642,555,160
RS_GCF_000009865.1
Monoisolate
Complete Genome
Full
representative genome
Major
279,808
1,283
Staphylococcus haemolyticus JCSC1435
null
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Staphylococcus
Staphylococcus haemolyticus
true
Eubacteria
Firmicutes
1
0.989
1
1
2,697,861
4
32.78
2,685,015
1
2,600
785,925
85.820989
99.62
0
0
341
yes
yes
yes
20
high
2,609,880
0
TTACTAGGTTATAAAATGGTAAACGACGAACTCATGGCAACTGTTAAATCGGATCACGGACATATATTTAGGTATTCATTTAAAATTGAAACGCCTGAGTATGAAATTCTGGAAGTATTAGAAGAAGTTAATAGGCACGTTGATAATGGT
89Staphylococcus haemolyticus JCSC1435
G000009365
ASM936v1
GCF_000009365.1
PRJNA224116
SAMEA3138202
null
2006/07/24
German Research Centre for Biotechnology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/365/GCF_000009365.1_ASM936v1
637,000,004
RS_GCF_000009365.1
Monoisolate
Complete Genome
Full
representative genome
Major
393,595
59,754
Alcanivorax borkumensis SK2
strain=SK2
null
Bacteria
Proteobacteria
Gammaproteobacteria
Oceanospirillales
Alcanivoracaceae
Alcanivorax
Alcanivorax borkumensis
true
Eubacteria
Proteobacteria
1
1
1
1
3,120,143
1
54.73
3,120,143
1
2,820
929,045
87.73194
100
0
0
352
yes
yes
yes
20
high
1,684,150
0
ATGAAAAACTATATGGATCTGTGCGTCGGCACTCTGGTTTTCTGGGCCGTCGGTTTTGGGTTGATGTTCGGCACCAGCAGCAATGGCTGGTTCGGACAGGATCAGTTCATGCTGAACCACGCAGATAGCAGCACCTGGGCTATGCTCCTG
1Alcanivorax borkumensis SK2
G000008385
ASM838v1
GCF_000008385.1
PRJNA224116
SAMN02603678
null
2005/02/02
New England Biolabs, Inc.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/385/GCF_000008385.1_ASM838v1
637,000,340
RS_GCF_000008385.1
Monoisolate
Complete Genome
Full
representative genome
Major
292,805
80,849
Wolbachia endosymbiont strain TRS of Brugia malayi
null
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rickettsiales
Anaplasmataceae
Wolbachia
Wolbachia endosymbiont of Brugia malayi
true
Eubacteria
Proteobacteria
0.96
1
0.9
1
1,080,084
1
34.18
1,080,084
1
1,140
271,320
73.973691
99.15
0
0
223
yes
yes
yes
20
high
585,000
0
GAGCATGAGCACCTCTGCTTTCCTCGCGATTGGCTGCACACTCCATAGTAATAACCGCTTGTGGAATCATGTTAGCAAGCTCCAACGCTTCAACTAAGTCGCTGTTCCATACCATGCTGCGGTCTTCAATTGCAATATCAGGCATCATTT
111Wolbachia endosymbiont strain TRS of Brugia malayi
G000006845
ASM684v1
GCF_000006845.1
PRJNA57611
SAMN02604088
null
2005/02/14
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/845/GCF_000006845.1_ASM684v1
637,000,188
RS_GCF_000006845.1
Monoisolate
Complete Genome
Full
reference genome
Major
242,231
485
Neisseria gonorrhoeae FA 1090
strain=FA 1090
null
Bacteria
Proteobacteria
Betaproteobacteria
Neisseriales
Neisseriaceae
Neisseria
Neisseria gonorrhoeae
true
Eubacteria
Proteobacteria
1
1
1
1
2,153,922
1
52.69
2,153,922
1
2,142
609,210
83.31778
99.82
0.21
0
323
yes
yes
yes
20
high
701,090
0
GTGATACCGATTTCACACGTATTCTTGTATGCCAACAAAATCACCTTGATCAGTACGGCCGAACAAGCAGGCATTCGTAATCAAGGGCAGTTGTTTGCTTCTTCCGGTAATGTGGCGATTGATGCAAATGGCCGTTTGGTCAATAGTGGC
66Neisseria gonorrhoeae FA 1090
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,819,450
1
GTTGCTGATGTTTTCAGACCTTCAAATCACTGTTCTTCATTCACTTCTCCTACTTTTTTTTTTTTTTGAGATGGAGTTCGTGCTGTTGCCCAGGCTGGAGTGCGGTGGTGCAATCTTGGCTCACTGCAGCCTCCGCCTCCTGGGTTCAAG
120homo sapiens
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
5,643,170
0
TCATAGGTCATCATGGCCGGCCGATAACGGCGCATCAGCTCCACGGCATTTGGCATTAGATAGATGATTGAAAATGCACAGAACAGCATGAGCACGGGTTCACGCATTTCGAAGGCCGATGGGGCATCGAGTGATGCGCCGAACATCTGC
86Sinorhizobium meliloti 1021
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,705,050
1
CCTGGACCTCTCCTCCTTCCTTCCTTGTTGGTTGCTGTTAAGCCAGCCTTGGGCACCAGGGACAGTGGGGACGTGGCTGTGCACCGGGCCCAGGGCTGGCAGGAGGCTGCTTCAGGGCTCTGGACCAGAGCAGTGTGTGGCTGGTGGTAC
120homo sapiens
G000010505
ASM1050v1
GCF_000010505.1
PRJNA224116
SAMD00060922
null
2008/05/20
Kitasato University
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/505/GCF_000010505.1_ASM1050v1
642,555,148
RS_GCF_000010505.1
Monoisolate
Complete Genome
Full
representative genome
Major
431,947
837
Porphyromonas gingivalis ATCC 33277
strain=ATCC 33277
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Porphyromonadaceae
Porphyromonas
Porphyromonas gingivalis
true
Eubacteria
Bacteroidetes
1
1
0.9
1
2,354,886
1
48.36
2,354,886
1
1,981
685,765
85.805173
99.92
0
0
278
yes
yes
yes
20
high
206,570
0
GAACGGCTCTCAATGCGCTACTGACTCTCCGCGAACAACGATGTCGGGGTCTCTCCATCCATTACTCTGCCATTGAGAAATTTCCTCTCGAAAGGGATGTATATGAGCATCTTCGCTTTTCTGTGGGAATGGCCGATGAAGACAAACTCC
75Porphyromonas gingivalis ATCC 33277
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,224,250
1
TAGCCATAAATATGGAAAGTGCCTTCACTCATTGGGAGAAGTAAAAAAAAAAAAAAAATTTAAGAAATATTTTTTGGCTGGGTGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGATGGGTGGACTGCTTGAGCTCAGG
120homo sapiens
G000009145
ASM914v1
GCF_000009145.1
PRJNA224116
SAMEA3138193
null
2003/05/06
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/145/GCF_000009145.1_ASM914v1
637,000,195
RS_GCF_000009145.1
Multiisolate
Complete Genome
Full
representative genome
Major
228,410
915
Nitrosomonas europaea ATCC 19718
strain=ATCC 19718
null
Bacteria
Proteobacteria
Betaproteobacteria
Nitrosomonadales
Nitrosomonadaceae
Nitrosomonas
Nitrosomonas europaea
true
Eubacteria
Proteobacteria
0.98
1
0.9
1
2,812,094
1
50.72
2,812,094
1
2,670
848,291
88.875656
99.97
0.74
25
352
yes
yes
yes
20
high
2,103,010
0
TGCCTGCACTCAGTTTTCTGGAGAAAATCACCATCTGGCGCACATCAGTGGAAACCGATGGTGAGGTCATCATGCGGCCCATTACATTGCAAACCCTGCTGGTTGCGCTCATTGTCCTGAGTTTGGCCATGATTGCCGCACACAATCTGC
69Nitrosomonas europaea ATCC 19718
G000010605
ASM1060v1
GCF_000010605.1
PRJNA224116
SAMD00060929
null
2008/04/08
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
641,522,653
RS_GCF_000010605.1
Monoisolate
Complete Genome
Full
representative genome
Major
455,632
1,911
Streptomyces griseus subsp. griseus NBRC 13350
strain=NBRC 13350
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces griseus
true
Eubacteria
Actinobacteria
1
1
1
1
8,545,929
1
72.23
8,545,929
1
7,113
2,547,362
87.837226
99.84
0
0
357
yes
yes
yes
20
high
7,715,110
0
CGTTCGACGCGGCGTTGACACCCAGGATGAACAGGGCGTCCGCGGACTCCCAGTCCTTGAGGTCGACCGTCCCCTTTCCGGTGCCGAGGGACGCCCGCAGGGCCCGCCCGCTGGCCTCGTGGCACATGTTGGAGCAGTCCGGCAGATTGT
96Streptomyces griseus subsp. griseus NBRC 13350
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,353,700
1
AAATAAATAAATAAAATTAAAAATAAATAAATAAATAAAAATAAAATCTAAACTGTTGACCACATCTACCTAGAATGCCTCATTCCACATACCTCCGGATCCTCTCTCCTCTCTGTTCTCTGATCAATTCTCTTGCTCCTGGGACCCTCA
120homo sapiens
G000010665
ASM1066v1
GCF_000010665.1
PRJNA224116
SAMD00060954
null
2009/06/11
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/665/GCF_000010665.1_ASM1066v1
644,736,352
RS_GCF_000010665.1
Monoisolate
Complete Genome
Full
representative genome
Major
573,370
184,917
Desulfovibrio magneticus RS-1
strain=RS-1
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfovibrionales
Desulfovibrionaceae
Desulfovibrio
Desulfovibrio magneticus
true
Eubacteria
Proteobacteria
0.99
0.996
1
1
5,315,620
3
62.67
5,248,049
1
4,555
1,546,858
85.744052
100
0
0
357
yes
yes
yes
20
high
3,688,490
0
CCTGACCGCCGCCAACCCGCAGGTCGCCATCGCCGTCTACCAGGCTTACCTGCAGTTCAAGCTGCCGGATTGCGACATCGAAGTCACCGCTGGTCTGCAGGATCTGTCCCTGCCGGCCAACGCCTTCTTCACCGACTCCGTTGTCTTCGG
36Desulfovibrio magneticus RS-1
G000009365
ASM936v1
GCF_000009365.1
PRJNA224116
SAMEA3138202
null
2006/07/24
German Research Centre for Biotechnology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/365/GCF_000009365.1_ASM936v1
637,000,004
RS_GCF_000009365.1
Monoisolate
Complete Genome
Full
representative genome
Major
393,595
59,754
Alcanivorax borkumensis SK2
strain=SK2
null
Bacteria
Proteobacteria
Gammaproteobacteria
Oceanospirillales
Alcanivoracaceae
Alcanivorax
Alcanivorax borkumensis
true
Eubacteria
Proteobacteria
1
1
1
1
3,120,143
1
54.73
3,120,143
1
2,820
929,045
87.73194
100
0
0
352
yes
yes
yes
20
high
1,402,830
0
AGGGTCTAAAGTACGGAGGTAGTGCCACTTGCTGTGGGTTAGCCGGTTCTCCCAAGCTTGAGATGACGGTTTTTCCATTCATTTTGCGCGGAGTAAATCTGTTAGGGGTAGATAGCGTTGAATTACCCTGTGAAATTAAGCAGCAAATGT
1Alcanivorax borkumensis SK2
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,401,350
1
AGGTTCCACACAGCAGGTATATCTGCCATGAAGACCTCTGACATCGCAGAGGCTGGCAAAGCAGCTCAGGGTCCTAGATCTGAGGAGGCCCCCAGAGGCTGTTTCTCTTTCTAGGCTCAGGCAGCAGATGGCACGGTGACGTCAGGCCAT
120homo sapiens
G000010585
ASM1058v1
GCF_000010585.1
PRJNA224116
SAMD00060930
null
2009/01/28
Juntendo University School of Medicine
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/585/GCF_000010585.1_ASM1058v1
643,348,562
RS_GCF_000010585.1
Monoisolate
Complete Genome
Full
representative genome
Major
458,233
69,966
Macrococcus caseolyticus JCSC5402
strain=JCSC5402
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Macrococcus
Macrococcus caseolyticus
true
Eubacteria
Firmicutes
1
0.965
1
1
2,219,737
9
36.56
2,102,324
1
2,352
677,409
89.896055
96.13
1.1
0
339
yes
yes
yes
20
high
1,131,520
0
AAAACAGAGGATCAGAAACAATTCCATTCACATTTCCGGCAATTCATAACGTTGAAGATGTAAATCATACGTTCGTGATCATTACACATGTATTTGTCAGCAGCTCAGTTGATTATTATGATGAGGATGAAATTTACTTTGAAAGTGTCA
55Macrococcus caseolyticus JCSC5402
G000010665
ASM1066v1
GCF_000010665.1
PRJNA224116
SAMD00060954
null
2009/06/11
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/665/GCF_000010665.1_ASM1066v1
644,736,352
RS_GCF_000010665.1
Monoisolate
Complete Genome
Full
representative genome
Major
573,370
184,917
Desulfovibrio magneticus RS-1
strain=RS-1
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfovibrionales
Desulfovibrionaceae
Desulfovibrio
Desulfovibrio magneticus
true
Eubacteria
Proteobacteria
0.99
0.996
1
1
5,315,620
3
62.67
5,248,049
1
4,555
1,546,858
85.744052
100
0
0
357
yes
yes
yes
20
high
2,256,670
0
GACGCTGGCCCAGGCGGCCGGGACGGCGATCTCGACCAGACCTTCCATGGCCATGTCCACGGCGTCGATGTTCATCTTGACGATTTTTTCGCCCTTGTTGCCGTAGGTCTTCTTGATGGAGTCCTTCAGCAGGCTGATGGCTTCCTCGAT
36Desulfovibrio magneticus RS-1
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
4,312,620
0
TGAGAACCGCTCCATCTGCGAGCTCAATCGCTAAGCCAGGCGGCCGTGGTAGAATATCTCGCACCCGCGAGGATGCGATCTCTGGGCATGCCGTGGCTGAAGGAACTGCGCGCGGCCGGCACGTCTGCGCCAGGTGAATTGCGTCGGGTT
86Sinorhizobium meliloti 1021
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
808,950
1
TCGAGCTCTTGAGTTCAGGCAATCCACCTGCCTCGGCCTTTCCAAGTGCTAGGATTACAGGCATGAGCCACCACGCCCGACATTTTTTTTTTTTTTTTTTTTTGAGAGGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGA
120homo sapiens
G000010085
ASM1008v1
GCF_000010085.1
PRJNA224116
SAMD00061079
null
2006/01/10
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/085/GCF_000010085.1_ASM1008v1
637,000,270
RS_GCF_000010085.1
Monoisolate
Complete Genome
Full
representative genome
Major
343,509
63,612
Sodalis glossinidius str. 'morsitans'
strain=morsitans
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Pectobacteriaceae
Sodalis
Sodalis glossinidius
true
Eubacteria
Proteobacteria
1
0.993
1
1
4,292,502
4
54.5
4,171,146
1
5,742
1,142,020
78.310831
100
0
0
357
yes
yes
yes
20
high
950,950
0
CTGCTTCAGCGTCGCGCTGGCGTACAATAGGGCAGAGGTGATTTCCTTTTGGGTGACAACATGGCTACTGTTGGGATACAACGCTTTGATTTGCTGTTTCAGTTCCGTCAGGGTGCATTTCGGCTGCTCCTTTGACAGCCAGTCGGTAAC
87Sodalis glossinidius str. 'morsitans' morsitans
G000010565
ASM1056v1
GCA_000010565.1
PRJDA19023
SAMD00060921
null
2007/05/07
Marine Biotechnology Institute Co., Ltd
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/565/GCA_000010565.1_ASM1056v1
640,427,128
GB_GCA_000010565.1
Monoisolate
Complete Genome
Full
na
Major
370,438
110,500
Pelotomaculum thermopropionicum SI
strain=SI
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Peptococcaceae
Pelotomaculum
Pelotomaculum thermopropionicum
true
Eubacteria
Firmicutes
0.98
1
1
1
3,025,375
1
52.96
3,025,375
1
3,001
887,464
86.415667
100
0.63
0
331
yes
yes
yes
20
high
1,838,590
0
TTAAACATTTCAAAAGTTGTTGCCGGAGGCATATCCATGGCCCTGCATCCGTCCATAAGCGCAGAAGACTATAACATGTACCTGAATTGAAAACATGTACTCTGAATTAAAAAAAGCAACAAGCGGTAAATATTCCGCTTGCAGCAACTT
73Pelotomaculum thermopropionicum SI
G000010585
ASM1058v1
GCF_000010585.1
PRJNA224116
SAMD00060930
null
2009/01/28
Juntendo University School of Medicine
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/585/GCF_000010585.1_ASM1058v1
643,348,562
RS_GCF_000010585.1
Monoisolate
Complete Genome
Full
representative genome
Major
458,233
69,966
Macrococcus caseolyticus JCSC5402
strain=JCSC5402
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Macrococcus
Macrococcus caseolyticus
true
Eubacteria
Firmicutes
1
0.965
1
1
2,219,737
9
36.56
2,102,324
1
2,352
677,409
89.896055
96.13
1.1
0
339
yes
yes
yes
20
high
530,140
0
AGGAGAAGCTTAGCAAACTTGAAAGATACTTCACGAACGTGCCGGAAGCGAATGCACATGTGAAGATAAAAACTTATCAAGATGGTAAATCTAAAGTAGAAGTTACGATCCCTCTTAAAGACGTGACATTACGTGCAGAAGAACGTCATA
55Macrococcus caseolyticus JCSC5402
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,718,800
1
AGGCTGCAGTTGAGTTATTGGCTGGGGTGTGTTCTCATCTGGAGGTTCGACTGGGGAGAGATCTGTTTCCAAGCTCTCTCAGGTTGTGGGCAGTTGGGACTGAGGGCACAGCAGTTTGTTGGCTGTTGGCTGGAGGCTGCTTTCAGGTTC
120homo sapiens
G000010065
ASM1006v1
GCF_000010065.1
PRJNA224116
SAMD00061073
null
2004/12/16
Nagoya University, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/065/GCF_000010065.1_ASM1006v1
637,000,307
RS_GCF_000010065.1
Monoisolate
Complete Genome
Full
representative genome
Major
269,084
32,046
Synechococcus elongatus PCC 6301
strain=PCC 6301
null
Bacteria
Cyanobacteria
null
Synechococcales
Synechococcaceae
Synechococcus
Synechococcus elongatus
true
Eubacteria
Cyanobacteria
1
1
0.9
1
2,696,255
1
55.48
2,696,255
1
2,691
815,460
89.10092
99.73
0
0
342
yes
yes
yes
20
high
102,310
0
GGCTTTGCACTCTCGTCGTTGGCTATTGATGGTGCTCACAAGCTGCTTCGCGACTAGCCTGTTCGCTAGACCTGCAATCGCTGCTGATGGCTGGTGGATCGATCAGTATGCGGTCATTCTCTTTACTGCCACGGGACGGCTCGATGCAGA
100Synechococcus elongatus PCC 6301
G000009985
ASM998v1
GCF_000009985.1
PRJNA224116
SAMD00061077
null
2005/12/01
Tokyo University of Agriculture and Technology, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/985/GCF_000009985.1_ASM998v1
637,000,155
RS_GCF_000009985.1
Monoisolate
Complete Genome
Full
representative genome
Major
342,108
84,159
Magnetospirillum magneticum AMB-1
strain=AMB-1
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhodospirillales
Rhodospirillaceae
Magnetospirillum
Magnetospirillum magneticum
true
Eubacteria
Proteobacteria
1
1
0.9
1
4,967,148
1
65.09
4,967,148
1
4,628
1,522,305
90.298759
99
0
0
360
yes
yes
yes
20
high
4,671,940
0
GCCGCCCAGGTCCACGAACGCACCGTAATCGGTGATGTTCTTGACCACGCCCTCGAGGATCTGGCCTTCCTTGAGGTTCTCGATCAGCTCGGAGCGCTGCTCGGCGCGGGTCTCTTCGAGAACGGCGCGACGCGACACCACGATGTTGCC
56Magnetospirillum magneticum AMB-1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,439,200
1
CTGTGCAGTGTCTTCCTGTGTTTGAGCCATCTCTGTAAGTGATCTTCCTGTGTTTGAGCCATCTCTGTAAATGATCTTCATGTTTGAGCCATCTCTGTAAATGATCTTCATGTTTGAGCCATCTCTGTAAATGATCTGTAAGACAGGTAG
120homo sapiens
G000009065
ASM906v1
GCF_000009065.1
PRJNA57621
SAMEA1705942
null
2003/05/06
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/065/GCF_000009065.1_ASM906v1
637,000,351
RS_GCF_000009065.1
Monoisolate
Complete Genome
Full
reference genome
Major
214,092
632
Yersinia pestis CO92
strain=CO92
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia pestis
true
Eubacteria
Proteobacteria
1
0.994
1
1
4,829,855
4
47.64
4,653,728
1
4,298
1,371,586
83.669593
99.82
0
0
372
yes
yes
yes
20
high
1,692,340
0
CCTCCAGCCGCCAGAACCCGTTTATTCGCTTCGATCAGGATAGAAAACTGTTCCGTAATGCGCTGGAAGTTGAGATGTTGACCAAAGGTTTTGATAACGGTCCGCTGTTTAAAAATCTGACTCTCCGCCTGGAAGTGGGTGAGAAAGTGG
116Yersinia pestis CO92 ASM906v1
G000008345
ASM834v1
GCF_000008345.1
PRJNA224116
SAMN02603281
null
2004/07/30
Goettingen Genomics Laboratory
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/345/GCF_000008345.1_ASM834v1
637,000,215
RS_GCF_000008345.1
Monoisolate
Complete Genome
Full
representative genome
Major
267,747
1,747
Propionibacterium acnes KPA171202
strain=KPA171202
null
Bacteria
Actinobacteria
Actinobacteria
Propionibacteriales
Propionibacteriaceae
Cutibacterium
Cutibacterium acnes
true
Eubacteria
Actinobacteria
1
1
1
1
2,560,265
1
60.01
2,560,265
1
2,373
780,330
89.799572
100
0
0
319
yes
yes
yes
20
high
902,850
0
CCTGTGGTCCTGGGGCTGGGGTTCTTATTGCCGGATCGGTGGTTTTGGCGGGTCGGGCTCGAGCCATCCTTCGCCCGGATGGCACCATGCTGGATGCTCCACAGACCGCCATTGTTGAGACCCCGGATCTATCTGAGGATCAGGTCAAAG
77Propionibacterium acnes KPA171202
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,457,400
1
CTGCAGGGGGAGGATCCCAGCTACATCTACCTTCCCTGTCTGTCCCCAGGGCGCAGACAAGTGACAGGGATGGGTTTGTTTTTCAGTGGGGCCAGGAGGGCAGGAGGCCAGGTGACCCATGGAGAGCCACCCGAGGGGGAAGCTGCCATG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,319,650
1
TATCTATCTATCTATCTATCTATCTATCTATCTATCAGCATTTACTACACTGAAAATTAAAACCAGTCCAGGAGCAGTGTCTCATGCCTGTAATCCCAGCGTGTTGGGAGGCTGGCCACACAGATCACTTGAGGTCAGGAGTTTGAGACC
120homo sapiens
G000010625
ASM1062v1
GCF_000010625.1
PRJNA224116
SAMD00060936
null
2008/01/24
Kazusa DNA Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/625/GCF_000010625.1_ASM1062v1
641,522,640
RS_GCF_000010625.1
Monoisolate
Complete Genome
Full
representative genome
Major
449,447
1,126
Microcystis aeruginosa NIES-843
strain=NIES-843
null
Bacteria
Cyanobacteria
null
Chroococcales
Microcystaceae
Microcystis
Microcystis aeruginosa
true
Eubacteria
Cyanobacteria
1
1
0.9
1
5,842,795
1
42.33
5,842,795
1
5,605
1,591,543
80.239081
99.89
0.51
25
350
yes
yes
yes
20
high
4,113,460
0
ATTCTCCCAAGAGGCAATTAATGATCCAGGGTGAGCGCATCTCAAACGCCATTGACAATTGACCAATTTTGTTATCCGTTTGCTGTGTGAGCATTTCAAGCGATACCAGTCAATCAGAATAGTTACGAACTCGATCCATTTGGTCGATTG
64Microcystis aeruginosa NIES-843
G000010825
ASM1082v1
GCF_000010825.1
PRJNA224116
SAMD00060943
null
2009/08/26
Acetobacter pasteurianus genome sequencing consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/825/GCF_000010825.1_ASM1082v1
644,736,321
RS_GCF_000010825.1
Monoisolate
Complete Genome
Full
representative genome
Major
634,452
438
Acetobacter pasteurianus IFO 3283-01
strain=IFO 3283 substr. IFO 3283-01
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhodospirillales
Acetobacteraceae
Acetobacter
Acetobacter pasteurianus
true
Eubacteria
Proteobacteria
1
0.982
0.9
1
3,340,249
7
53.1
2,907,495
1
3,156
1,006,859
88.810714
100
0
0
352
yes
yes
yes
20
high
87,620
0
TGGGGTAAGAGAAGATGTATGGCACGTTGTTTCCCCATTAGCACCTCAGGTTTGGCCGCGTGAAAAGCATGACGCTTTCCTTGGGGCAGCTTTGGCGGTCGGTCTCTATTATTGTCCGGCAGGCGCTTGTTGGCGGCGGTCCACCGCGCA
0Acetobacter pasteurianus IFO 3283-01 IFO 3283 substr. IFO 3283-01
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,918,650
1
GCTTTCTGTGAGCAGGTGTGCAGGAACCGAGGGGGTGAGACCAGTCTGTTCCTGGGCTGGGACAGCTGACTCTGGCCTGGACTCCCTGGACCCTGCAGCCCCCTCTCCTGGGACAAGCTACAGCAGGAGGCTGAATGGAGAGAGGAGGGG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,475,050
1
TTGAACTCCTGGCCTTCTGAACTCTTGTCTTAGCCTCACACAGTGCCAGGATTACAGGGATAAGCCATCTTGACTAGACCTATCTTTCTTTTTGATTATAGCCATCCTACTGGGTATGAGGTGGTATCTCATTGTGGTTTTGATTTGCAT
120homo sapiens
G000008625
ASM862v1
GCF_000008625.1
PRJNA57765
SAMN02603207
null
1999/12/22
DIVERSA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/625/GCF_000008625.1_ASM862v1
637,000,010
RS_GCF_000008625.1
Monoisolate
Complete Genome
Full
reference genome
Major
224,324
63,363
Aquifex aeolicus VF5
strain=VF5
null
Bacteria
Aquificae
Aquificae
Aquificales
Aquificaceae
Aquifex
Aquifex aeolicus
true
Eubacteria
Bacteria
1
0.994
0.9
1
1,590,791
2
43.3
1,551,335
1
1,776
514,666
95.304851
98.98
1.22
75
317
yes
yes
yes
20
high
1,108,380
0
GAAATCCCATACCCATAGAGGAAGTTGAACCAGTTGAAAGTATCCTCAGGCGTTTCGTGACTGGCGGTATGTCCCTGGGAGCTCTCTCCCCCGAAGCCCACGAGACTATAGCGGAAGCCTGCAACAGGCTCGGAATGAAGTCAAATTCCG
2Aquifex aeolicus VF5
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,089,750
1
AGTGACCCTAGGAAGGACCGGCCAGGCCAGGGCTGTGTACAGCTGGGTCTTGCACATCTGTACATCCGCTCACCTGTCTTCCATAGAGTCTTCTCTTCTATACGGGGAGTTCCTTATTGTGATCTCCATGCGGTGATCTCTCAGCTCCCC
120homo sapiens
G000008765
ASM876v1
GCF_000008765.1
PRJNA57677
SAMN02603243
null
2002/11/22
Genome Therapeutics
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/765/GCF_000008765.1_ASM876v1
637,000,076
RS_GCF_000008765.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,562
1,488
Clostridium acetobutylicum ATCC 824
strain=ATCC 824
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Clostridiaceae
Clostridium
Clostridium acetobutylicum
true
Eubacteria
Firmicutes
1
0.998
0.1
0.9
4,132,880
2
30.93
3,940,880
1
3,896
1,211,240
86.343567
100
0
0
345
yes
yes
yes
19
high
1,294,150
0
CTATATTCTGTAAAAATATATTCATTTCTTTTACAAAAGGTTTTAATTCTTCTTCTAAATCTTGTTTTAAATACTCTAAGGAAGGCAAAACACTACCTCCTTTATTTCTCTTCTTTAGCAGAATTATTTTTAGATGAAATATTTAATTCC
29Clostridium acetobutylicum ATCC 824
G000010585
ASM1058v1
GCF_000010585.1
PRJNA224116
SAMD00060930
null
2009/01/28
Juntendo University School of Medicine
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/585/GCF_000010585.1_ASM1058v1
643,348,562
RS_GCF_000010585.1
Monoisolate
Complete Genome
Full
representative genome
Major
458,233
69,966
Macrococcus caseolyticus JCSC5402
strain=JCSC5402
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Macrococcus
Macrococcus caseolyticus
true
Eubacteria
Firmicutes
1
0.965
1
1
2,219,737
9
36.56
2,102,324
1
2,352
677,409
89.896055
96.13
1.1
0
339
yes
yes
yes
20
high
1,190,540
0
TCTGACAATCGGTGCTTTGTCGTTCAATGCCTGATGCATCGTATCGAGACTTTCTTTATAACCTAGATCACTAATTGTGTCTCCTGCGGTTCTGCGTACTGCAATATTTCTATCCTCCATTGCCTCATCCAGCAATGGAAGGACATCACG
55Macrococcus caseolyticus JCSC5402
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,891,050
1
GTCCTGCTGGTGGAGGTGGAGGTGGGAGTGAATGTGAGAGTGCTGGTGATGGTGCGGAGTCACGTTGAACATCTGCAGTCGGGCCAGGGGATCGCTGGTCAGCGATGCCATGCGCTCTGCGTGGATACGCTCGGCTGCCAGTCTGTCAGG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,338,850
1
CCTAAAAAGAGCACAATTTTGTTCTTATTATCATTATTTTTAGACAGGGTCTCACTCTGTTGCCTAGGTTGGAAGTGGTACAAACACAACTCACTGCAGCTTTGGCCTCCTGGGTGCAAGCCATCCTCCTGCCCCAGCCTCCTGAGTAGC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,222,800
1
AGAGAGAGAGAAAGAGAAGTCTGAAATGTCTGCGTGGAGGTGGCACTGAATAAAGCACATCTGTGGGTGTGGAGGAAATTGATAAGCATGACAATATTGCTGAGTCCCAAGGCCAAGAACTTCTGTCTTAATTATCATTGTGCCCCAGTG
120homo sapiens
G000007005
ASM700v1
GCF_000007005.1
PRJNA224116
SAMN02603227
null
2002/11/25
European/Canadian Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/005/GCF_000007005.1_ASM700v1
638,154,518
RS_GCF_000007005.1
Monoisolate
Complete Genome
Full
representative genome
Major
273,057
2,287
Sulfolobus solfataricus P2
strain=P2
null
Archaea
Crenarchaeota
Thermoprotei
Sulfolobales
Sulfolobaceae
Sulfolobus
Sulfolobus solfataricus
true
Archaea
Crenarchaeota
0.96
1
1
0.9
2,992,245
1
35.79
2,992,245
1
3,281
874,971
86.125133
100
0
0
196
no
yes
yes
14
medium
1,005,420
0
GAAGGAAGGAGGGCGGTACTCGAGGTCATCGTAAGCGAGGCTGAGGACACCATGGCCTATTGGAGTCTCCTGGTCAGGGTTTGGAAGAGGTCGAGCTTCGTCCTGGTCGTAGCCGACGGGATCCAGGCCTTGGACAAGGCCATCTCCCTC
97Sulfolobus solfataricus P2
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
4,209,790
0
TGCACACTTCTCGGCCGTATGTCCCCTGCTGTGGTATGGTACTGCATACCGTTGGAGCTCTAATCTGCCGACTGCGAAGTTTGCGGATCGCGTCGTTGGTGCTTCCGCGCTTAATGTTGACTATCGGCCGATTTGGATAAGTCAACAGTT
86Sinorhizobium meliloti 1021
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,849,900
1
GGCGGTGATGTGATGATGATGGTGATGGTGATGATAATGGAGATGATGATGGTGATGATGGTGATGATGGTGATGATGTGATGATGACGGTGATGGTGATGATGATGATGGTGATGGTGGTGATGGTAGTGATAATGTGATAATGATGGT
120homo sapiens
G000007525
ASM752v1
GCF_000007525.1
PRJNA57939
SAMN02603675
null
2005/01/21
Nestle Research Center, Switzerland
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/525/GCF_000007525.1_ASM752v1
637,000,031
RS_GCF_000007525.1
Monoisolate
Complete Genome
Full
reference genome
Major
206,672
216,816
Bifidobacterium longum NCC2705
strain=NCC2705
null
Bacteria
Actinobacteria
Actinobacteria
Bifidobacteriales
Bifidobacteriaceae
Bifidobacterium
Bifidobacterium longum
true
Eubacteria
Actinobacteria
1
0.996
0.9
1
2,260,266
2
60.13
2,256,640
1
1,833
667,063
86.967994
100
0
0
289
yes
yes
yes
20
high
751,660
0
ACGGCCGTTGCCCATCACCTGCGGCACAACAATCGCCACCAAACCGGTGATGAGACCAGCCAGCGGCATCTGCCACAGAATAGCCTTACCGGTTGGCTTGTGCGCTTCCGCCCATTGCGAACCTTTTCGGAACAATGCGCCGCCCACTCC
13Bifidobacterium longum NCC2705
G000008465
ASM846v1
GCF_000008465.1
PRJNA224116
SAMN02604184
null
2004/12/02
University of Hawaii at Manoa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/465/GCF_000008465.1_ASM846v1
637,000,136
RS_GCF_000008465.1
Monoisolate
Complete Genome
Full
representative genome
Major
283,942
135,577
Idiomarina loihiensis L2TR
strain=L2TR
null
Bacteria
Proteobacteria
Gammaproteobacteria
Alteromonadales
Idiomarinaceae
Idiomarina
Idiomarina loihiensis
true
Eubacteria
Proteobacteria
1
1
1
1
2,839,318
1
47.04
2,839,318
1
2,658
892,961
92.667007
100
0.17
0
344
yes
yes
yes
20
high
1,347,450
0
GCATGTTGAGGTTGGTGACAAAGTAGAGCAGGGCGATTCAATTGGTGCTATAGGTGCCACAGGCCGTGCTACGGGGCCTCACCTAGACTGGCGGGTTAACTGGGGAAATGAGCGGTTAGACCCTGCGTTACTTCCCCAGCTTTATCAGGA
50Idiomarina loihiensis L2TR
G000009985
ASM998v1
GCF_000009985.1
PRJNA224116
SAMD00061077
null
2005/12/01
Tokyo University of Agriculture and Technology, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/985/GCF_000009985.1_ASM998v1
637,000,155
RS_GCF_000009985.1
Monoisolate
Complete Genome
Full
representative genome
Major
342,108
84,159
Magnetospirillum magneticum AMB-1
strain=AMB-1
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhodospirillales
Rhodospirillaceae
Magnetospirillum
Magnetospirillum magneticum
true
Eubacteria
Proteobacteria
1
1
0.9
1
4,967,148
1
65.09
4,967,148
1
4,628
1,522,305
90.298759
99
0
0
360
yes
yes
yes
20
high
1,354,080
0
GGGTGATATGCATGGTTTGAATCTTATAAGACGCCCGGGGGGGCTTGTCATCCCAGCTGGTTTGACCCACCCTTTGCCTGGAAGGGTTGCCTGAGAGGATTTGGCCGATGAGCGACAGGGTCTTTGTGCGTCTGGAACAGCGTGCCGTGC
56Magnetospirillum magneticum AMB-1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,805,050
1
CCAAGATGTTCTCGATCTCCTGACCTTGTGATCTGCCTGCCTCGTCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCTTGCCCAGCCCAAATTTTTAATTTTTGAAAAAAAATTTAAACTTTTTTGTTAAAAACTTAGGCACACAT
120homo sapiens
G000008165
ASM816v1
GCF_000008165.1
PRJNA58091
SAMN02598266
null
2004/06/24
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/165/GCF_000008165.1_ASM816v1
637,000,015
RS_GCF_000008165.1
Monoisolate
Complete Genome
Full
reference genome
Major
260,799
1,392
Bacillus anthracis str. Sterne
strain=Sterne
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus anthracis
true
Eubacteria
Firmicutes
1
1
1
1
5,228,663
1
35.38
5,228,663
1
5,471
1,495,624
84.251844
99.23
0.15
0
381
yes
yes
yes
20
high
2,485,340
0
TGGAGATGTAAGCCGGTACATTGTGACGTAAAAAAAGTTCTTTAACTGGAATAATCATATCTTTCATTAATTTTGTTAACATACCCATTTCAAACTCGAAATTAAATCGATCTATACTACATAAATCAGCGAATACTACACCAATAAAAC
6Bacillus anthracis str. Sterne ASM816v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,485,100
1
GCTGTTAACAACAGTAATTACAGTATAGTTGTGAGATGAAAACATGACTAAATTATGACACTGCTTGTGTAACAATCTCTTAAAACTGACTCAGAAGGCAACAGCTGCACAATTAGGCTATAAATTCTCTTAAATGAACTTGTCGGTGGC
120homo sapiens
G000010345
ASM1034v1
GCF_000010345.1
PRJNA224116
SAMD00060915
null
2007/07/11
Japan Agency for Marine-Earth Science and Technology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/345/GCF_000010345.1_ASM1034v1
640,753,056
RS_GCF_000010345.1
Monoisolate
Complete Genome
Full
na
Major
387,093
387,093
Sulfurovum sp. NBC37-1
strain=NBC37-1
null
Bacteria
Proteobacteria
Epsilonproteobacteria
null
null
Sulfurovum
Sulfurovum sp. NBC37-1
true
Eubacteria
Proteobacteria
1
1
0.9
1
2,562,277
1
43.87
2,562,277
1
2,552
795,482
91.463999
99.59
0.61
0
334
yes
yes
yes
20
high
2,444,780
0
TTTTGATGAGCTGATGCAGACAGGATACTTTGTCAATCGATCCATACTCGACTGGTATTTTGTGGACCACTGGTGGGACGGAAAATTCAAAGGAGGCTCCGTGGAATTCATGTTCGAACACCAGAATATCATCTCACGTGCCAGAAAGAA
98Sulfurovum sp. NBC37-1 ASM1034v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,351,150
1
AAGTATACATAAAACCTATTACAGGCATAAATTAGGAACTGTTTTCTCCAAAGGCAATACCTTTTGCAAATCAGCAATGGCTTGTTTTAGTTTCTTGGCATAATCATAGCGTTCCTTTTGGACAGCTTCCCGTTTTCTTTCATCTAATTT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,276,300
1
CTTATTTTTGGTGGAGCACATCCTCCAGTAGTTTTATCAAAAAGGATAAATGAGGCTGAGCACGATGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGTGGATCACCTCAGGTCAGGAGTTCAAGACCCGCCTGACCAA
120homo sapiens
G000008165
ASM816v1
GCF_000008165.1
PRJNA58091
SAMN02598266
null
2004/06/24
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/165/GCF_000008165.1_ASM816v1
637,000,015
RS_GCF_000008165.1
Monoisolate
Complete Genome
Full
reference genome
Major
260,799
1,392
Bacillus anthracis str. Sterne
strain=Sterne
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus anthracis
true
Eubacteria
Firmicutes
1
1
1
1
5,228,663
1
35.38
5,228,663
1
5,471
1,495,624
84.251844
99.23
0.15
0
381
yes
yes
yes
20
high
5,132,270
0
ACTTTCTTTTTGTATATAATGAAACAAAATAGACTATTTTATTTTGAAAAAGAATACAAATTTACTATAAACAAGCATACATTAAAGGAGGCTACTTCATGTTATCTACACCAATCGGACGATTAAGAGCAATCGGCTTAATTGAGGGAA
6Bacillus anthracis str. Sterne ASM816v1
G000009705
ASM970v1
GCF_000009705.1
PRJNA224116
SAMD00061094
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1
637,000,199
RS_GCF_000009705.1
Monoisolate
Complete Genome
Full
representative genome
Major
103,690
103,690
Nostoc sp. PCC 7120
null
null
Bacteria
Cyanobacteria
null
Nostocales
Nostocaceae
Nostoc
Nostoc sp. PCC 7120
true
Eubacteria
Cyanobacteria
1
0.992
0.9
1
7,211,789
7
41.27
6,413,771
1
6,159
2,024,679
82.716938
99.19
0
0
360
yes
yes
yes
20
high
3,824,730
0
GCAAGATTATTTAGTCAAGCGACAGGTAAATGTTAATGTATTGGTTCGTGCTGTATTTTATGCAATTGAGCGTAAGCAAGCATTAGAAACATTACGCACCATGAATACAACCCTAGAAAACCGGGTGGAAGAACGCACGGCTGAATTGGT
70Nostoc sp. PCC 7120 ASM970v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,334,550
1
TTGAACCTGGGAGGCGGAAGTTGCAGTGAGCCAATATCATGCCACTGCACTCCAGCCTAGGCAACAGAGCGAGACTCAATCTCAAAAAAAACCACTAAAACATTTACAAATAAATGGCTTAAAAAGGACATTTGTAATCAGTATCTGTGT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,798,350
1
CCTCAGGGCTTCACCTCAGGCACACCCAGGCCTTGGGCTGGTCAGGGGCGTGGGGTGGCACTGGCACTCACAAGCTCCCGGGGCCTCCATGGTGGTCCTCATCACCCTGGCAGATAGCAGGCTCTCCGCGCCCATCTCCCACCTTGACCC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,480,200
1
GCTGTCTGTGGAATTCCTACCATTGGGAGCACACTTGGTCCTCTTACTTGGAAAGATGAATGTTAGCTCCTATTATCCAGCTGAAAGGTAAAGAGGAGTCAGGCTGTCCTCCAGCTCACGTAATGTTACATGTACCACGGAGTCAACCTT
120homo sapiens
G000007265
ASM726v1
GCF_000007265.1
PRJNA57943
SAMN02604013
null
2002/08/28
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/265/GCF_000007265.1_ASM726v1
637,000,285
RS_GCF_000007265.1
Monoisolate
Complete Genome
Full
reference genome
Major
208,435
1,311
Streptococcus agalactiae 2603V/R
strain=2603V/R
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus agalactiae
true
Eubacteria
Firmicutes
1
1
1
1
2,160,267
1
35.65
2,160,267
1
2,106
643,747
87.791509
100
0.18
0
298
yes
yes
yes
20
high
576,550
0
CCAACAGAAGTTTATATTGTTCAGAAGAATGCCGCAAAAAGGGCATTCGTGAGAAACAACGCAAATTGATGAAGCAAAAACGAGCCGATAAAAAGAAAGAGAAAATTAAGGTTCTAAATACTAACGCAGATGTGACAGAAAAGCCTAAAA
91Streptococcus agalactiae 2603V/R
G000007145
ASM714v1
GCF_000007145.1
PRJNA57887
SAMN02603845
null
2002/05/24
Sao Paulo state (Brazil) Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/145/GCF_000007145.1_ASM714v1
637,000,344
RS_GCF_000007145.1
Monoisolate
Complete Genome
Full
reference genome
Major
190,485
339
Xanthomonas campestris pv. campestris str. ATCC 33913
strain=ATCC 33913
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xanthomonas
Xanthomonas campestris
true
Eubacteria
Proteobacteria
1
1
0.9
1
5,076,188
1
65.07
5,076,188
1
4,292
1,472,146
85.453159
99.64
0
0
358
yes
yes
yes
20
high
848,770
0
ATTCCCGATTCCCGATTCCCGATTCCCGATTCCCGCATGTCTGACGCCCGTACCCAACAAGCCGATGCCCTCATCGGCGAACTGCAGCGCGAACACGGCGGTCGGCTGACCGTGTTCCTGGGCGCAGCGCCTGGCGTGGGCAAGACCTAC
112Xanthomonas campestris pv. campestris str. ATCC 33913
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,898,000
1
CTCCGTTATCAGCAAGAAGGCTGTTTTGCTTTCTTATCATTCATGTGTTCACTGGAGCAGCACTTGTAATTTCCTTCGAAGGACTTTTCCTTTGCATTCACAACTTGGCTAACTGTTTGGCACACGAGGCCTAGCTTTCAGCCTATCTCA
120homo sapiens
G000008865
ASM886v1
GCF_000008865.1
PRJNA57781
SAMN01911278
null
2004/05/11
GIRC
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/865/GCF_000008865.1_ASM886v1
637,000,108
RS_GCF_000008865.1
Monoisolate
Complete Genome
Full
reference genome
Major
386,585
562
Escherichia coli O157:H7 str. Sakai
strain=Sakai substr. RIMD 0509952
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Enterobacteriaceae
Escherichia
Escherichia coli
true
Eubacteria
Proteobacteria
1
0.996
0.9
1
5,594,477
3
50.48
5,498,450
1
5,399
1,663,868
87.620737
99.97
0.33
0
374
yes
yes
yes
20
high
874,250
0
TTCGGTTTCGACAACGGTACGGCTACCGTCTGCCAGCTCGCGCTGAACATAATCCACCAGCATTGGCGATTTCTGCTCGGCAAAATATTCTTTTTGCAGGCGGTCTTCGCGCTCAGCTTCGTTAGGCAGGAAGCTATTTGCCCAAATCTG
38Escherichia coli O157:H7 str. Sakai Sakai substr. RIMD 0509952
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,759,850
1
GCCTTACCTCGTTCAGGACTGGACAGCGGAGAGGTGCCAGGGTTGGACCAATGCAGGGTTGTCTCCTGCTGTGACCCTGCAGCCACTTGGGAACTGCCGCCTCACCAGAGGCTTCCAAACTTCTGGCCCCAGACCAACCCACTGCAGTGT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
386,400
1
AAGGCAAATCTCTGTCTCTAATACCCAGCACGCAACTTGTCATCAGATCTCATCAGCAACACCTTCAAAACCGTTCGTGCCTCCTCTCAAACCACCACATAGTTCAATTCTCAGTTAACCTAAAGGTCTCTCTGTTTCCACCCTTGTCAC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,727,000
1
AACCTCCCTCTCAGCAGTTGACTTTTATTGTTCTTTCCTTTTTCTTTCTTTTTTTTTTTTTTTTTTCTGAGACAGGCTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGTGCGAATACGGCTCACTGAAGCCTTGACATCCTAGGCTCC
120homo sapiens
G000007465
ASM746v2
GCF_000007465.2
PRJNA57947
SAMN02604090
null
2011/09/01
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/465/GCF_000007465.2_ASM746v2
637,000,288
RS_GCF_000007465.2
Monoisolate
Complete Genome
Full
reference genome
Major
210,007
1,309
Streptococcus mutans UA159
strain=UA159
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus mutans
true
Eubacteria
Firmicutes
1
1
0.9
1
2,032,925
1
36.83
2,032,925
1
1,897
591,301
85.692487
100
0
0
308
yes
yes
yes
20
high
1,307,150
0
TTACCTAACCACTTCCCAAGGAGAAAATCAAAGATAGCCAGTCCGACAAAAACTATTCCAACTTACTCCTACGCCACATTCAAGATATTTTTAATTTATTCTAAAGAAAATAAAAGAGAGCTTTTTCTGATTGCTATGAACTGCACCCCA
92Streptococcus mutans UA159
G000007625
ASM762v1
GCF_000007625.1
PRJNA224116
SAMN02603289
null
2003/02/05
Gottingen Genomics Laboratory
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/625/GCF_000007625.1_ASM762v1
637,000,080
RS_GCF_000007625.1
Monoisolate
Complete Genome
Full
representative genome
Major
212,717
1,513
Clostridium tetani E88
strain=Massachusetts substr. E88
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Clostridiaceae
Clostridium
Clostridium tetani
true
Eubacteria
Firmicutes
1
0.997
1
1
2,873,333
2
28.64
2,799,251
1
2,799
856,294
87.797934
98.28
0.14
0
315
yes
yes
yes
20
high
1,761,110
0
TTTTTTCTAAAACATCTAACCTTTTATCTGGCACAGTAACCACACCTACATTAGGTTCTATGGTACAAAATGGATAGTTTGCCGCTTCAGCTCCTGCACTTGTAATTGCATTAAATAGAGTACTTTTACCTACATTAGGTAGTCCAACAA
30Clostridium tetani E88 Massachusetts substr. E88
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,290,400
1
CCCGGGCTGGGCCGGGCCATGCAGAGAAAGGGCAGCCTCTGCCATGGCAGCCCCAAATCACCTCTCAGAGCAACTGTCTGGGGTCCCCAGCCCCAGAACTCCAGCAGAGTCCTGGCCTGGGGAAGCCCCCGTGCCGCCTCAAGCCTCCAG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,859,500
1
GGGCACTAGCTCACTACAGTCACTGACTGATATGGTTTGGCTCTGTGTCCCCACCCAAATCTCATCTTGAATTGCAATTCTCATCTGTCAAGGGAGAGACCTGCAATCCCCATGTGTCGAGGGAGGGAGGTGTTTGGATCATGGGGCCGT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,802,300
1
TGCAGGTTCACCGCACGGAGCACACACGTGCTCCCAGCCCAGAACTCGTGCTCATGTGGGCAGTCCCCAAGTGAGAGCTGAAAATCCCTCTCCGGGCAGCCTGCCCCGCCAGTGGCTATTTCTATCAACATCAACATTGACATCCATGGG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,835,600
1
ATTATCTCACTGGTGGGGAGGAGAGAAAGGCCCAGAGAGTTTAGGTTAGGTGAGGGCTGCCACAGGTCACAGCCTCAGGGCACCGTTCACACGTCACCTTCAGAAGTTAGGACAAGGACAGCAAGTGGGGAATCCAGAGGAAGAGCAGGT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,194,050
1
TGTCATCCTCGCTTTACAGTCTACAGAACTCAGAAGAGATCATCTGCACAAGGCCACGCAGCCAATGGGCACGAAGTAGGATTCCAGTGCAGCTGTCTCAGAGCTCAACCCTATCTGGCTTGCACAGGAACTCCTGCTGCCTGTGCTGCC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,812,950
1
TGTGAGTTCAGCTCCCTTTGCATTCACGTTGCCAGATTGAGCAAGTCAATCTTCAAGATGCCTAGTTAAGTTTGAATTTCAGATAAAGAACAAATACAGTTTTAATATAAGTATGTCCCTTGCAACATTTGAGACATACTTATACTAAAA
120homo sapiens
G000007185
ASM718v1
GCA_000007185.1
PRJNA294
SAMN02603235
null
2002/04/03
Fidelity Systems
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/185/GCA_000007185.1_ASM718v1
638,154,507
GB_GCA_000007185.1
Monoisolate
Complete Genome
Full
na
Major
190,192
2,320
Methanopyrus kandleri AV19
strain=AV19
null
Archaea
Euryarchaeota
Methanopyri
Methanopyrales
Methanopyraceae
Methanopyrus
Methanopyrus kandleri
true
Archaea
Euryarchaeota
1
1
0.9
1
1,694,969
1
61.16
1,694,969
1
1,814
523,004
90.896353
96.74
1.6
0
146
yes
yes
yes
15
medium
720,460
0
ATCATCGACAGGCGACGGCCTTCTCCCCCGGGGGACCCAGACGGGAGTCATCTTTTGCGAAGTCTGGCCCCGGACGCCGCCGACTCATTAGCCCCTTAATTACGTTCTCCCCGCTACGGAGAGGCGCAGTACCGGGCCCGACCCAGACCC
60Methanopyrus kandleri AV19
G000009965
ASM996v1
GCF_000009965.1
PRJNA224116
SAMD00061071
null
2005/01/05
Kyoto University, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/965/GCF_000009965.1_ASM996v1
638,154,520
RS_GCF_000009965.1
Monoisolate
Complete Genome
Full
representative genome
Major
69,014
311,400
Thermococcus kodakarensis KOD1
strain=KOD1
null
Archaea
Euryarchaeota
Thermococci
Thermococcales
Thermococcaceae
Thermococcus
Thermococcus kodakarensis
true
Archaea
Euryarchaeota
1
1
0.9
0.9
2,088,737
1
52
2,088,737
1
2,314
650,473
91.73242
100
0
0
190
no
yes
yes
19
medium
438,750
0
ATCAAGGATTGCGTTCGCAACATCGGTGACCTCAGCCCTCGTTGGGAGCTTCTCGTGGGTCATGCTCTCTAGCATCTGAGTCGCTGTTATCACGGGCTTTCCCGCACAGTTTGCCTTTTGGATAAGCTTTTTCTGGAGAATCGGGAGCTT
102Thermococcus kodakarensis KOD1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,583,800
1
TAGCTGGGATTACAAGCATGTACCACCATGCCTGGCTAATTTTTTTGTATTTTTATTAGAGACGGGATTTCTCCATGTTGGCTTGGCCGGTCTCAAACTCTTGACCTTAGGTGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTAC
120homo sapiens
G000010665
ASM1066v1
GCF_000010665.1
PRJNA224116
SAMD00060954
null
2009/06/11
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/665/GCF_000010665.1_ASM1066v1
644,736,352
RS_GCF_000010665.1
Monoisolate
Complete Genome
Full
representative genome
Major
573,370
184,917
Desulfovibrio magneticus RS-1
strain=RS-1
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfovibrionales
Desulfovibrionaceae
Desulfovibrio
Desulfovibrio magneticus
true
Eubacteria
Proteobacteria
0.99
0.996
1
1
5,315,620
3
62.67
5,248,049
1
4,555
1,546,858
85.744052
100
0
0
357
yes
yes
yes
20
high
4,326,010
0
GGCCAGGCTCCCCACCCCGCCCACGGCCAGGGACATGGCGCCTTCCACGCCGTTTAAGCGCAGGTTGTCGGCGGCGCACCACACGGCCTGGGGGTCGATGTCCAGGCCCACGCCAGTCAGCCCCAGGCGGCAAAGCCCGATGCCCAGGAT
36Desulfovibrio magneticus RS-1
G000010665
ASM1066v1
GCF_000010665.1
PRJNA224116
SAMD00060954
null
2009/06/11
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/665/GCF_000010665.1_ASM1066v1
644,736,352
RS_GCF_000010665.1
Monoisolate
Complete Genome
Full
representative genome
Major
573,370
184,917
Desulfovibrio magneticus RS-1
strain=RS-1
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfovibrionales
Desulfovibrionaceae
Desulfovibrio
Desulfovibrio magneticus
true
Eubacteria
Proteobacteria
0.99
0.996
1
1
5,315,620
3
62.67
5,248,049
1
4,555
1,546,858
85.744052
100
0
0
357
yes
yes
yes
20
high
4,769,050
0
GGCGCAAGCGGGAGCTGGCCGCCTTTGCCTTTGAACTCACCGACGAGAGCTTTGCCCTCCACGCTGCCCGTTTCGGGCGCGGCGACCGGGACAAGGGACTCACCCTGACCATCAACGTCCTGGCCCAGGCTTCCTGGGTCGGCGGCACGG
36Desulfovibrio magneticus RS-1