#genome
stringclasses
121 values
asm_name
stringclasses
120 values
assembly_accession
stringclasses
120 values
bioproject
stringclasses
45 values
biosample
stringclasses
120 values
wgs_master
float64
seq_rel_date
stringclasses
98 values
submitter
stringclasses
76 values
ftp_path
stringclasses
120 values
img_id
float64
637M
2.51B
gtdb_id
stringclasses
120 values
scope
stringclasses
3 values
assembly_level
stringclasses
1 value
genome_rep
stringclasses
1 value
refseq_category
stringclasses
3 values
release_type
stringclasses
2 values
taxid
float64
1.15k
681k
species_taxid
float64
7
911k
organism_name
stringclasses
120 values
infraspecific_name
stringclasses
112 values
isolate
stringclasses
1 value
superkingdom
stringclasses
2 values
phylum
stringclasses
18 values
class
stringclasses
30 values
order
stringclasses
56 values
family
stringclasses
75 values
genus
stringclasses
89 values
species
stringclasses
117 values
classified
bool
1 class
lv1_group
stringclasses
2 values
lv2_group
stringclasses
13 values
score_faa
float64
0.93
1
score_fna
float64
0.88
1
score_rrna
float64
0.1
1
score_trna
float64
0.6
1
total_length
float64
618k
9.12M
contigs
float64
1
22
gc
float64
22.5
72.2
n50
float64
616k
9.03M
l50
float64
1
1
proteins
float64
525
7.92k
protein_length
float64
172k
2.68M
coding_density
float64
74
96.9
completeness
float64
76.3
100
contamination
float64
0
4.4
strain_heterogeneity
float64
0
100
markers
float64
124
383
5s_rrna
stringclasses
2 values
16s_rrna
stringclasses
1 value
23s_rrna
stringclasses
1 value
trnas
float64
14
20
draft_quality
stringclasses
2 values
start_position
int64
0
10M
human_label
int64
0
1
autotrain_text
stringlengths
150
150
autotrain_label
class label
121 classes
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
936,600
1
TTGAACTCCTGACCTCAGGTGATCCGCCTGCCTCGGTCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACCGCTGGCCTCTAGTATAGGTTTTAAATTTACTCTGGCTTTTTTTTTCTCTCTCTTTTTTTTTTTGGAGATAGAGTCTCG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,582,200
1
TTTGGAGGCCCGAAGTCCAAGATCAAGGTGTCACCAGGGCCATGCTGCACTCTGGGTGGAATCCTTCCTGGCCTCTTCTGGCTTCTGGCTGTGGCTGGCAATCTTGGCATTCCTTCACTTGCAGCTGCACCCCTCCCCCGCTGTGCCTCC
120homo sapiens
G000010165
ASM1016v1
GCF_000010165.1
PRJNA224116
SAMD00060942
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
643,692,011
RS_GCF_000010165.1
Monoisolate
Complete Genome
Full
representative genome
Major
358,681
1,393
Brevibacillus brevis NBRC 100599
strain=NBRC 100599 (= 47)
null
Bacteria
Firmicutes
Bacilli
Bacillales
Paenibacillaceae
Brevibacillus
Brevibacillus brevis
true
Eubacteria
Firmicutes
1
1
1
1
6,296,436
1
47.27
6,296,436
1
5,917
1,875,522
87.757979
99.73
0.27
0
381
yes
yes
yes
20
high
5,739,630
0
CCTCAATGTCCACGCCCATTTCACGAAGCTTGGCGGTCACGGATTTGAGATGATCGCAAATCGCACCTTCCACAAAGACATCCCCACCGGTAATCGCTGCAGCCACCATGAAAGTACCTGCTTCAATGCGGTCAGGAATGACACAATGTG
15Brevibacillus brevis NBRC 100599
G000007145
ASM714v1
GCF_000007145.1
PRJNA57887
SAMN02603845
null
2002/05/24
Sao Paulo state (Brazil) Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/145/GCF_000007145.1_ASM714v1
637,000,344
RS_GCF_000007145.1
Monoisolate
Complete Genome
Full
reference genome
Major
190,485
339
Xanthomonas campestris pv. campestris str. ATCC 33913
strain=ATCC 33913
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xanthomonas
Xanthomonas campestris
true
Eubacteria
Proteobacteria
1
1
0.9
1
5,076,188
1
65.07
5,076,188
1
4,292
1,472,146
85.453159
99.64
0
0
358
yes
yes
yes
20
high
3,983,070
0
AGCACCGAAAAGCCGCACAACCGGCACACGATGCCCAGGATCACCAGCACGAAGAACAGCGAGGTCAGGTAAAACGAGCCCACCAGCCAGGCCAGGTTGACCAGCGATTCCACGCCGTACTTGCCGATGGTGAAAGCGATTGCACCGAAT
112Xanthomonas campestris pv. campestris str. ATCC 33913
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,800,100
1
ACAGCCTGAACAACATAGTAAGACCCTGTCTCAAAAACAATGGTAAATGTGTAAGTAAATATAAGATACTTTTATTCTTGGTTTAAAAACACTTTCTTGAAAATATAATTGGCCAAACACTTATGGGAAAGTTATAGCTCTTAATGCCTA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,524,250
1
GGTTCAAGCGATTCTTTTGCCTCAGCCTCCCCAGTAACTGAGACTACAGACCTGCGCCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGAGGCTTCACCATTTTGGCCAGGATGGTCTCAATCTCTTGACCTCGTGATCCGCC
120homo sapiens
G000009345
ASM934v1
GCF_000009345.1
PRJNA57741
SAMEA1705958
null
2007/01/12
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/345/GCF_000009345.1_ASM934v1
640,069,335
RS_GCF_000009345.1
Monoisolate
Complete Genome
Full
reference genome
Major
393,305
630
Yersinia enterocolitica subsp. enterocolitica 8081
strain=8081
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia enterocolitica
true
Eubacteria
Proteobacteria
1
0.998
0.9
1
4,683,620
2
47.22
4,615,899
1
4,253
1,352,606
85.086813
99.95
0
0
373
yes
yes
yes
20
high
1,105,650
0
GCCATGCGATGAGAGATTGTGAGACAGCTTCTGAACCTAAGGTGCAGAATATTAATACGGGTATTGCTAATGCTACCCAGACCCGTTTCATCACAAAGACTGTCGGTTTGGCTGGCTCTTTAAACGTGAGTTCTGTTGTCATTTGCGTGT
115Yersinia enterocolitica subsp. enterocolitica 8081
G000008765
ASM876v1
GCF_000008765.1
PRJNA57677
SAMN02603243
null
2002/11/22
Genome Therapeutics
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/765/GCF_000008765.1_ASM876v1
637,000,076
RS_GCF_000008765.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,562
1,488
Clostridium acetobutylicum ATCC 824
strain=ATCC 824
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Clostridiaceae
Clostridium
Clostridium acetobutylicum
true
Eubacteria
Firmicutes
1
0.998
0.1
0.9
4,132,880
2
30.93
3,940,880
1
3,896
1,211,240
86.343567
100
0
0
345
yes
yes
yes
19
high
3,746,860
0
TATATTCTTTTGCTTCCTTAAGTAATTTCCAAGAGAACTGTTTCCCTTATCCACTATAGCAATTTTCAAATTTTCCTTTACGCTTTTTTCGCTCTTATTTACTACGCTAGACATAAAAAACGATATAAGTGGAAGCAGTAGCATAGGTAT
29Clostridium acetobutylicum ATCC 824
G000009925
ASM992v1
GCF_000009925.1
PRJNA58195
SAMD00061068
null
2004/09/16
Kitasato Univ.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/925/GCF_000009925.1_ASM992v1
637,000,025
RS_GCF_000009925.1
Monoisolate
Complete Genome
Full
reference genome
Major
295,405
817
Bacteroides fragilis YCH46
strain=YCH46
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Bacteroidaceae
Bacteroides
Bacteroides fragilis
true
Eubacteria
Bacteroidetes
1
0.998
0.9
1
5,310,990
2
43.2
5,277,274
1
4,416
1,603,639
88.979964
99.26
0
0
347
yes
yes
yes
20
high
4,983,940
0
AAAGAAGCGGCAAGCGCCTGCATTCTTCGTACAAAATGTTTCATGGTCTTTACAGTTTTAGTATCTATTTATGAATGTTCTGACTTTCCGGATGCAAATAAAACAAATCTGCGGCAAACAGATTCCATTTACCCATACGGCAAGAATACT
10Bacteroides fragilis YCH46
G000007785
ASM778v1
GCF_000007785.1
PRJNA57669
SAMN02603978
null
2003/03/28
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/785/GCF_000007785.1_ASM778v1
637,000,101
RS_GCF_000007785.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,185
1,351
Enterococcus faecalis V583
strain=V583
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Enterococcaceae
Enterococcus
Enterococcus faecalis
true
Eubacteria
Firmicutes
0.99
0.991
1
1
3,359,974
4
37.38
3,218,031
1
3,271
1,000,353
87.714339
99.53
0.31
0
309
yes
yes
yes
20
high
1,289,470
0
GCCACAAGATCCTTCGAAAATGGCTGATTTTCAATTATTTAATGATCGAGTCACTGGAGAAAAATATTCCCTCAACGATGACGGTGTAATCATTAATGAAAAATTAGCTAAATTATTTGGCTATAAAGTCGGAGATCAATTAAATTTAGA
37Enterococcus faecalis V583 ASM778v1
G000010185
ASM1018v1
GCF_000010185.1
PRJNA224116
SAMD00060918
null
2008/02/14
Kitasato Institute for Life Sciences
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/185/GCF_000010185.1_ASM1018v1
641,522,627
RS_GCF_000010185.1
Monoisolate
Complete Genome
Full
representative genome
Major
334,413
1,260
Finegoldia magna ATCC 29328
strain=ATCC 29328
null
Bacteria
Firmicutes
Tissierellia
Tissierellales
Peptoniphilaceae
Finegoldia
Finegoldia magna
true
Eubacteria
Firmicutes
1
0.995
1
1
1,986,740
2
32.07
1,797,577
1
1,846
611,719
90.720879
99.39
0
0
282
yes
yes
yes
20
high
547,820
0
CGTTCATGGAAATCACGAAAAAAGAATAGAAAACCTCGTAGAAATAGATGAGACAATCAGAAAATATAATGTACAAATTCTAGATAATGAAGATGTGTTCTTATCAAACAATATTAAACTTATCGGAGTGGACGATTCATCTGGAAAAAT
39Finegoldia magna ATCC 29328
G000007865
ASM786v1
GCF_000007865.1
PRJNA224116
SAMN02604086
null
2004/01/30
Univ. Minnesota
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/865/GCF_000007865.1_ASM786v1
637,000,168
RS_GCF_000007865.1
Monoisolate
Complete Genome
Full
representative genome
Major
262,316
1,764
Mycobacterium avium subsp. paratuberculosis K-10
strain=K-10
null
Bacteria
Actinobacteria
Actinobacteria
Corynebacteriales
Mycobacteriaceae
Mycobacterium
Mycobacterium avium
true
Eubacteria
Actinobacteria
1
1
1
1
4,829,781
1
69.3
4,829,781
1
4,544
1,497,326
91.345322
99.28
0.33
0
336
yes
yes
yes
20
high
1,008,670
0
AACGGTTTTCGCCTACCCCAACGGCCGGTTGCAGGATTTCGACGAGCGGGCCAAGGACGTGTTGCGGGCCCGCGGGGTGCGCTGGGCACTGTCCACCGCACCGGGATTCGCCGACCGGAGCTGCGACCCGCTGGCGTTACCGCGGTTGGC
65Mycobacterium avium subsp. paratuberculosis K-10
G000007945
ASM794v1
GCF_000007945.1
PRJNA224116
SAMN02604087
null
2003/07/23
Univ. Ohio
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/945/GCF_000007945.1_ASM794v1
637,000,124
RS_GCF_000007945.1
Monoisolate
Complete Genome
Full
representative genome
Major
233,412
730
Haemophilus ducreyi 35000HP
strain=35000HP
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pasteurellales
Pasteurellaceae
Haemophilus
[Haemophilus] ducreyi
true
Eubacteria
Proteobacteria
1
1
1
1
1,698,955
1
38.22
1,698,955
1
1,689
506,660
87.856241
99.43
0.02
0
277
yes
yes
yes
20
high
764,140
0
CTGCCATAACTCCCAGATTGCTTTTTCCTCTTCTTCACTCGCTGCCGGTTTACGACCCATCGGTTCTTGCTTACCTAATAGACTACGACGCGAAGAGACCTTTGAGGTGGTTAAACCAAAATAGCTGTTTAGCATTTGGATAGAGGCGCC
44Haemophilus ducreyi 35000HP
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,195,750
1
CCCACCACGAGGCTGGTGACCTTGGACAAGAAACACCACACAGGCCCGGCCTCGGGTCAGACAGGCGGTTCTAGTGCCGGATGTTTCCGGGGCTACCGATAGTCCTGAGTTCGTGGCTCAGGTGGGGGGCCTGCTTGTGGAAGTGGCTGC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,705,250
1
AAACTGAGACTTGCTCTGTCACCCAGGCTGGAGTGCAGTAGCACGATCTCAGCTCACAGCAATCTCCACTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACCCGCCACCACGCGTGGCTAATTT
120homo sapiens
G000007085
ASM708v1
GCF_000007085.1
PRJNA224116
SAMN02603009
null
2002/05/14
Beijing Center.HGP
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/085/GCF_000007085.1_ASM708v1
637,000,318
RS_GCF_000007085.1
Monoisolate
Complete Genome
Full
representative genome
Major
273,068
911,092
Caldanaerobacter subterraneus subsp. tengcongensis MB4
strain=MB4
null
Bacteria
Firmicutes
Clostridia
Thermoanaerobacterales
Thermoanaerobacteraceae
Caldanaerobacter
Caldanaerobacter subterraneus
true
Eubacteria
Firmicutes
1
1
1
1
2,689,445
1
37.57
2,689,445
1
2,674
812,453
88.995016
99.04
0.6
0
329
yes
yes
yes
20
high
1,457,690
0
ATCCAGCGAATAGCCTTTTTCTGCCCCCTTACCTTGTCTATCACTTTTAACTCTCCGTCCTCATTGGTCAAAATGGGCTTTACGTTTAAAATCCCTCCTATGATTGACTGGGTTCTTGAAAGCCTTCCGCCTCTATATAAATAGTCTAAA
18Caldanaerobacter subterraneus subsp. tengcongensis MB4
G000007985
ASM798v2
GCF_000007985.2
PRJNA57743
SAMN02603989
null
2012/07/31
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/985/GCF_000007985.2_ASM798v2
637,000,120
RS_GCF_000007985.2
Monoisolate
Complete Genome
Full
reference genome
Major
243,231
35,554
Geobacter sulfurreducens PCA
strain=PCA
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfuromonadales
Geobacteraceae
Geobacter
Geobacter sulfurreducens
true
Eubacteria
Proteobacteria
1
1
1
1
3,814,128
1
60.94
3,814,128
1
3,417
1,176,369
90.878544
99.35
0
0
363
yes
yes
yes
20
high
1,753,570
0
TGACGACCGTCGTATCTATCTCATGATGCAGGGGAATGAGGTTTTCAAACTCGCCGTGAGGGCCATGGAGGATGCCGCCCTTGAAGCCCTTGATGCAAACGGGCTCACGCCTGCAGACATTTCGTTGTTCATCCCCCATCAGGCCAATCG
43Geobacter sulfurreducens PCA
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,624,450
1
ATAGGTAAATGTTCAAGGGATGTATGACCTGTGGAGGAAGGACTTAGAGAACTGCAGCTGGGCAAAGGCAGGGAAGAATGTGGTTGAGAGCACAAACAGCCTGGGAGGCAGCATTTCAAGGCTGGGCAGAGAAGTCTTAAGCACACTTGC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,673,300
1
GTGGGAGGCCAGGCCAGGGCAGTGAGCCAGCCCGCCTCTGTGCCCAGAGGAGGCGGGGCCCGGGGGAGCAGGGGAAGGGAGGGCCTGCACCCACCATTGGCAACAAAGCTGTCCTGGCCGCTCCCGTCACCAGGGCTGGAGGCACACGGA
120homo sapiens
G000007805
ASM780v1
GCF_000007805.1
PRJNA57967
SAMN02604017
null
2003/03/05
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/805/GCF_000007805.1_ASM780v1
2,508,501,074
RS_GCF_000007805.1
Multiisolate
Complete Genome
Full
reference genome
Major
223,283
251,701
[Pseudomonas syringae] pv. tomato str. DC3000
strain=DC3000
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas syringae group genomosp. 3
true
Eubacteria
Proteobacteria
1
0.997
0.9
1
6,538,260
3
58.34
6,397,126
1
5,862
1,948,843
87.825109
100
0.22
0
381
yes
yes
yes
20
high
4,408,690
0
AGGAAAAGGTCGACGAGATCGAAGCCGAGCAGATGCGCAAGGTCTACAAAAAAGAGCGCGATCAGCTCAAGGATGAAATCATCCAGGCGTTCCTGCCGCGCGCCTTTATCCGCCGCTCCGCGACCTTCGCCGCCATCGCACCCAGGCAAG
119[Pseudomonas syringae] pv. tomato str. DC3000
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,863,800
1
GGTCGCATTACAGCCAGTTGACTCGCGGAGTCCTCACTGGCCAACTAGAGTCTTCAAATCAACCAATGTCCATTATTTGGAGGGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCTCCATCACGGCACACTGCAGCCTCCACCTCCC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
829,350
1
AGTGCTGAGATGACAGGTGTGAGCTCCCACATCTGGTATGAGAGAATTTCTGGCTGTCACATCTAAGGTGGGGTACTCCTGTCATCCAGTGAGTCGAGACCAGGGATGTTGCTGAATCCTGCAGCACACAGGAGAATCCCCTACAACTAA
120homo sapiens
G000009025
ASM902v1
GCF_000009025.1
PRJNA224116
SAMEA3138187
null
2005/08/19
Max Planck Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/025/GCF_000009025.1_ASM902v1
637,000,090
RS_GCF_000009025.1
Monoisolate
Complete Genome
Full
na
Major
255,470
61,435
Dehalococcoides mccartyi CBDB1
strain=CBDB1
null
Bacteria
Chloroflexi
Dehalococcoidia
Dehalococcoidales
Dehalococcoidaceae
Dehalococcoides
Dehalococcoides mccartyi
true
Eubacteria
Chloroflexi
0.97
1
1
1
1,395,502
1
47.03
1,395,502
1
1,437
426,285
89.985038
99.01
0
0
259
yes
yes
yes
20
high
967,200
0
ACTCAGGCCTATGAAAAAACCCTCTAGCCATTATCATCTTCCCATTCTGTGATATAATCTATGTTCCGGTTTAAACCCGAAGAATAAATACTCGGAGTATAGTTTTGAACAGTATCTTAGCTATCAAAAATATTATTATAGAGTCTCTAA
34Dehalococcoides mccartyi CBDB1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
488,850
1
GGAGATGGAGCTGGAGGCACCGGAGCTTTGGGTGGATTCGCCCTGATGCGTCTGGAGGGATGGCTGGGCTGGGGAAGCTGGGGTTCCCTGAGTGGGGTCCAGGGGGCCGAGGGGTGCCAGGCAGGGAGAGGCTGGGCTGAAGCCTGAGGC
120homo sapiens
G000008625
ASM862v1
GCF_000008625.1
PRJNA57765
SAMN02603207
null
1999/12/22
DIVERSA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/625/GCF_000008625.1_ASM862v1
637,000,010
RS_GCF_000008625.1
Monoisolate
Complete Genome
Full
reference genome
Major
224,324
63,363
Aquifex aeolicus VF5
strain=VF5
null
Bacteria
Aquificae
Aquificae
Aquificales
Aquificaceae
Aquifex
Aquifex aeolicus
true
Eubacteria
Bacteria
1
0.994
0.9
1
1,590,791
2
43.3
1,551,335
1
1,776
514,666
95.304851
98.98
1.22
75
317
yes
yes
yes
20
high
1,333,670
0
ACTTCTCCCGATGTCTCTCCCCAAAGACTTCCGATGAGCGGAAAGGCCGGGAATTCTTCCCCTTCGCACTTTATCCTTGCAGAAACGGGAACGGTTTTAGTTACGGAAAAATCCTCCTCGTAAACCTTAAAACCTTTCCTCTTCAGATAA
2Aquifex aeolicus VF5
G000010625
ASM1062v1
GCF_000010625.1
PRJNA224116
SAMD00060936
null
2008/01/24
Kazusa DNA Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/625/GCF_000010625.1_ASM1062v1
641,522,640
RS_GCF_000010625.1
Monoisolate
Complete Genome
Full
representative genome
Major
449,447
1,126
Microcystis aeruginosa NIES-843
strain=NIES-843
null
Bacteria
Cyanobacteria
null
Chroococcales
Microcystaceae
Microcystis
Microcystis aeruginosa
true
Eubacteria
Cyanobacteria
1
1
0.9
1
5,842,795
1
42.33
5,842,795
1
5,605
1,591,543
80.239081
99.89
0.51
25
350
yes
yes
yes
20
high
2,723,890
0
ATGGTGCTAAAAATAAAACTTGAAAACCTAATTGAATGCTAGGATACCAAAAAGTCGCATTTTTATAACCAGCTTCCACATCATTAAATTTACTTTCATTTCTCATGAAAGCAAGTAAATTTTGACTCGATGGTTTTTGTAGTAGTTCAT
64Microcystis aeruginosa NIES-843
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,974,650
1
CCAGGACGTCCAGGCACAGAGGGCTGCATGATCCAGGCAGTGGTGGCCACAAGCTGCTCACCTGTAGGCAGGAAGCCTCGAGTTGCAGCTCTGGGTCATGTTCCACCCAAAGGTGTCTGGTGGCTGGACCTGAGCTCTGGTTGCAGGGCC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,425,250
1
GGCTTCCAATGAGCAGGGGGAGACAGACACCAGTCAAGTCACCCAGATCAATGATCTCAGACACTGAGACAAAGAACATGAAGGTTAAGTTTGAGTCGCCTCGGGGATGTGCGGCTGGGAGCCTGGAGGAGAAGGAGGAGTTGGTAGGGG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,429,000
1
ATGTGTCTGTAATCCCAGTTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCAAGAGTGCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCTTTGTCTCAAAAAAGAAAAAAAAAA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
38,250
1
TTTAGGCCAGGATTTTGAGAGCAGCCTGGACAATATAGTGAGACCCTGTCTCTACAAAAAAATTTTAAAAATTAGCCGAATGTGGTGGGGCATGCCTGTAGTCCCAGCTACTCCGGAGGCTGAGGTGGGAGGATTGCTTGAGCCCAGGAG
120homo sapiens
G000008925
ASM892v1
GCF_000008925.1
PRJNA58233
SAMN02604111
null
2006/03/30
University College Cork
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/925/GCF_000008925.1_ASM892v1
637,000,143
RS_GCF_000008925.1
Monoisolate
Complete Genome
Full
reference genome
Major
362,948
1,624
Lactobacillus salivarius UCC118
strain=UCC118
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Lactobacillaceae
Lactobacillus
Lactobacillus salivarius
true
Eubacteria
Firmicutes
1
0.986
1
1
2,133,977
4
33.04
1,827,111
1
2,106
630,045
86.976336
99.48
0.52
0
292
yes
yes
yes
20
high
1,242,410
0
TCTCTAAACCAATGAATGATCATTCCAGACTGAGATAAAGTAAATGGCACAAACACACCTACTGCATATAAAGGTATCAATAGATTAGTTTGTCCATGGAAAATTAAAATCAAAGTAATCGCACCAATTGCCAATGCAATAATACCATTA
53Lactobacillus salivarius UCC118
G000009725
ASM972v1
GCF_000009725.1
PRJNA224116
SAMD00061113
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/725/GCF_000009725.1_ASM972v1
2,514,885,032
RS_GCF_000009725.1
Monoisolate
Complete Genome
Full
representative genome
Major
1,148
1,148
Synechocystis sp. PCC 6803
strain=PCC 6803
null
Bacteria
Cyanobacteria
null
Synechococcales
Merismopediaceae
Synechocystis
Synechocystis sp. PCC 6803
true
Eubacteria
Cyanobacteria
1
0.99
0.9
1
3,947,019
5
47.37
3,573,470
1
3,713
1,164,101
86.890968
99.78
0
0
349
yes
yes
yes
20
high
3,046,420
0
GTGGTGAATCGTCCGGCATTGGCGGACTGGCTCACTTAGTTAATTTCCAAGGTTCTGACACAGTAAAGGCCCTGGTGTATGGGCAGCAATATTACAACTGCCCCATGGCGGCCTATTCGATTCCCGCCGCAGAACATTCCACCATTACAG
101Synechocystis sp. PCC 6803 ASM972v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
251,100
1
CACCCTGTCTACACTACCTGCCTATCCAGCAGATCCACCCTGTCTATACTACCTGCCTGTCTAGCAGATCCACCCTGTCTATACTACCTGCCCATCCAGCAGGTCCACCCTGTCTACACTACCTCCCTGCCGAGTAGATCCACCCTGTCT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,781,800
1
GAAGTTCCAGCTCATCAAATGCCTTGGGAGACCAGATTTGTCCCAGGGGCCTTCTGCAGGCGGTAGGGCCTGCTGGACACTCATAAATGCTGTAGAGTGTCAAGCGGCTAATTGGGAGTGAATGTCTCAATTCATCAAGTCACGTTTGGT
120homo sapiens
G000009925
ASM992v1
GCF_000009925.1
PRJNA58195
SAMD00061068
null
2004/09/16
Kitasato Univ.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/925/GCF_000009925.1_ASM992v1
637,000,025
RS_GCF_000009925.1
Monoisolate
Complete Genome
Full
reference genome
Major
295,405
817
Bacteroides fragilis YCH46
strain=YCH46
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Bacteroidaceae
Bacteroides
Bacteroides fragilis
true
Eubacteria
Bacteroidetes
1
0.998
0.9
1
5,310,990
2
43.2
5,277,274
1
4,416
1,603,639
88.979964
99.26
0
0
347
yes
yes
yes
20
high
533,910
0
CGAATGGGAGATGCCAGTTGACTTCAGCAAGGTATCCGGTTACTGCCGTAGCTACTACCAGTGTTATGTTGGTGATGGCCGAACTTAATCCGAACTGTTTCACACGGTATGAACCTACAAAGTATTTGGAGATTAATCCGGTGGATAGCG
10Bacteroides fragilis YCH46
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,614,850
1
TTCACAGAATTGGAAAAAACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCACCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCATGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCA
120homo sapiens
G000010625
ASM1062v1
GCF_000010625.1
PRJNA224116
SAMD00060936
null
2008/01/24
Kazusa DNA Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/625/GCF_000010625.1_ASM1062v1
641,522,640
RS_GCF_000010625.1
Monoisolate
Complete Genome
Full
representative genome
Major
449,447
1,126
Microcystis aeruginosa NIES-843
strain=NIES-843
null
Bacteria
Cyanobacteria
null
Chroococcales
Microcystaceae
Microcystis
Microcystis aeruginosa
true
Eubacteria
Cyanobacteria
1
1
0.9
1
5,842,795
1
42.33
5,842,795
1
5,605
1,591,543
80.239081
99.89
0.51
25
350
yes
yes
yes
20
high
5,837,520
0
ACTAAAACAGTTTTCTCTGAAATTCAAACTCGTTCTATTTCACAGCTTCCAATACCCAAAATTAGTCAAGAACAACAGCAACCTATAATTGTACTTGTAGATCAAATTCTCACGGCTAAAAAATCTAATCCCAAAGCTGACACCAGCGAG
64Microcystis aeruginosa NIES-843
G000008165
ASM816v1
GCF_000008165.1
PRJNA58091
SAMN02598266
null
2004/06/24
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/165/GCF_000008165.1_ASM816v1
637,000,015
RS_GCF_000008165.1
Monoisolate
Complete Genome
Full
reference genome
Major
260,799
1,392
Bacillus anthracis str. Sterne
strain=Sterne
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus anthracis
true
Eubacteria
Firmicutes
1
1
1
1
5,228,663
1
35.38
5,228,663
1
5,471
1,495,624
84.251844
99.23
0.15
0
381
yes
yes
yes
20
high
1,086,670
0
CTATAGGTGCATAACAAGATATAATAGAAGAAATGAATAAGGAGGCTAGTTGTGAAGAATCTTCGTTATCTCAATATATTTACGATATTAATTATATACACACTACTTATGTTTTACATTGGCTGGAACGGCTGGGTTTGGCTTCATGCG
6Bacillus anthracis str. Sterne ASM816v1
G000010785
ASM1078v1
GCF_000010785.1
PRJNA224116
SAMD00060961
null
2010/02/11
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/785/GCF_000010785.1_ASM1078v1
646,311,936
RS_GCF_000010785.1
Monoisolate
Complete Genome
Full
representative genome
Major
608,538
940
Hydrogenobacter thermophilus TK-6
strain=TK-6
null
Bacteria
Aquificae
Aquificae
Aquificales
Aquificaceae
Hydrogenobacter
Hydrogenobacter thermophilus
true
Eubacteria
Bacteria
1
1
0.8
1
1,743,135
1
44
1,743,135
1
1,905
573,308
96.888881
98.78
0.51
0
310
yes
yes
yes
20
high
1,427,920
0
CGGAAAGCTAAGAGTCCTCAAAGAGCCTTTTGTTCCAAGGTCTCCCAAGCAGGAAGAAAGTATAGCGGAGTTTGTCAGAAGGCGTTTTGGGAGGGAGTTTTTAGATTATGTAGTAGCTCCTTTCGTGTCTGGAGTTTACGCTGGAGACCC
49Hydrogenobacter thermophilus TK-6 ASM1078v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,370,300
1
AAGTGACCAAACGTGATGGTAGGAGATAAAGCCAGAGACATGGGGTGACAGGTTTGAACAGGCCTGAGCTGGCGGCTGGGGGGCTGTGCTCATCTGCTGGTGAAAGAGGGGGACACACCTGCCCTCCTCATTCAGCGCCCCACTCTTCCC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,275,350
1
CCCAGCATCAAACATTAGCTAAATCCTGAGCCATTCGTGTCTTGGAGCCTCTGGGTCTGAATAGGGCCCCTGCAAAATGACATCCGCCTTCTAACTTGAAAGCAGTCACTGGCTGATTACAAATTGCTGTGTCCTTAGTGCCTGGAGTTG
120homo sapiens
G000008805
ASM880v1
GCF_000008805.1
PRJNA57817
SAMN02603997
null
2005/05/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/805/GCF_000008805.1_ASM880v1
637,000,189
RS_GCF_000008805.1
Monoisolate
Complete Genome
Full
reference genome
Major
122,586
487
Neisseria meningitidis MC58
strain=MC58
null
Bacteria
Proteobacteria
Betaproteobacteria
Neisseriales
Neisseriaceae
Neisseria
Neisseria meningitidis
true
Eubacteria
Proteobacteria
1
1
0.9
1
2,272,360
1
51.53
2,272,360
1
2,107
632,964
82.059313
99.75
1.9
80
322
yes
yes
yes
20
high
1,915,940
0
CCAACACACCCGAACAACCCGACGGCGACATCGAAATCCTCATTACCGGACTGCGTCCCGGAGAAAAACTCTACGAAGAGCTGCTCATCGGCGACAACGTCCGCAAAACCGGCCATCCGCGCATCATGACCGCCAACGAGACCATGCTGC
67Neisseria meningitidis MC58
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,601,200
1
CGACACGTGGTTTTACTGTCATGGCAATATGTCCTCAGTTTTCCAATTCAAACATCTTATTTCAGATACTTGGTTCCATTAGCCACATGGGGGCTTATACCATCTTCCTCCCTGGCTGTGTGCTGGTTGGCTATTTCTGACTTTTGAGGT
120homo sapiens
G000007705
ASM770v1
GCF_000007705.1
PRJNA224116
SAMN02603528
null
2003/08/22
LNCC, Brazil
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/705/GCF_000007705.1_ASM770v1
637,000,074
RS_GCF_000007705.1
Monoisolate
Complete Genome
Full
representative genome
Major
243,365
536
Chromobacterium violaceum ATCC 12472
strain=ATCC 12472
null
Bacteria
Proteobacteria
Betaproteobacteria
Neisseriales
Chromobacteriaceae
Chromobacterium
Chromobacterium violaceum
true
Eubacteria
Proteobacteria
1
1
0.9
1
4,751,080
1
64.83
4,751,080
1
4,298
1,428,392
88.582238
99.04
0.45
0
372
yes
yes
yes
20
high
4,602,520
0
GAGCTGGACCCCGAGGACCTGGACATCGACACCGCCAAGCTGCTGGTGCTGATGGTGTTGTGGGCGCAACAGGCGGAACTGCCCATCCTGCTGGGCGAGGCGCTGCTGGAAGCGGTGCACGGCGAGCCGACCATGCAATAGCTTGTCAGG
27Chromobacterium violaceum ATCC 12472
G000010505
ASM1050v1
GCF_000010505.1
PRJNA224116
SAMD00060922
null
2008/05/20
Kitasato University
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/505/GCF_000010505.1_ASM1050v1
642,555,148
RS_GCF_000010505.1
Monoisolate
Complete Genome
Full
representative genome
Major
431,947
837
Porphyromonas gingivalis ATCC 33277
strain=ATCC 33277
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Porphyromonadaceae
Porphyromonas
Porphyromonas gingivalis
true
Eubacteria
Bacteroidetes
1
1
0.9
1
2,354,886
1
48.36
2,354,886
1
1,981
685,765
85.805173
99.92
0
0
278
yes
yes
yes
20
high
801,450
0
TAGAGAGGAATGATCTCTCTCTCAAGAATGTCATATAAGGAAAGAGCATCGAGTTTGTCCTGCATTTGTTGATCGCGATAAGTCGGTTTGTCGGTCAGTGCCCAGCCGGCATTTGGTCGATAACCTTCGTACCACCATCCATCTTGTACG
75Porphyromonas gingivalis ATCC 33277
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,198,450
1
ACTTTCTTTCTTTTTTCTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTTTGTCGCCCAGGCTGGAGTGCAATGGTGTGATCTCGGCCCACTGCAACCTCTGCCTCCAGGTTCAAGCGATTCTCCCACCTCAGCCTCCTGAGTA
120homo sapiens
G000011025
ASM1102v1
GCF_000011025.1
PRJNA224116
SAMD00060968
null
2010/01/05
Department of Bacteriology, Osaka Dental University
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/025/GCF_000011025.1_ASM1102v1
646,311,951
RS_GCF_000011025.1
Monoisolate
Complete Genome
Full
representative genome
Major
680,646
43,675
Rothia mucilaginosa DY-18
strain=DY-18
null
Bacteria
Actinobacteria
Actinobacteria
Micrococcales
Micrococcaceae
Rothia
Rothia mucilaginosa
true
Eubacteria
Actinobacteria
1
1
1
1
2,264,603
1
59.62
2,264,603
1
1,722
637,843
83.000906
99.33
0
0
293
yes
yes
yes
20
high
421,980
0
GAACTACTGTGCGTTGAGCGTAGAGTACGAACAAGCGTGCGGATAATGTGCCGAGAAATTCAAGACCACCCCCAGCAAAAGCCGCTACCCATAGCATCCGCGGAACACCTCTGCAGAATGTGCCGGTAACGGAGGACCCCTGGACTCTAC
84Rothia mucilaginosa DY-18
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,636,250
1
CAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAAACCCGTCTCTACTGAAAATACAAAAAATTAGCCGAGCATGGTGGCGCATGCCTGTAATCCCAGCAGCTTGGGATTGGGAAGCAGGAGAATCGCTTGAACCTGGGAGGCGGTGGT
120homo sapiens
G000008765
ASM876v1
GCF_000008765.1
PRJNA57677
SAMN02603243
null
2002/11/22
Genome Therapeutics
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/765/GCF_000008765.1_ASM876v1
637,000,076
RS_GCF_000008765.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,562
1,488
Clostridium acetobutylicum ATCC 824
strain=ATCC 824
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Clostridiaceae
Clostridium
Clostridium acetobutylicum
true
Eubacteria
Firmicutes
1
0.998
0.1
0.9
4,132,880
2
30.93
3,940,880
1
3,896
1,211,240
86.343567
100
0
0
345
yes
yes
yes
19
high
2,472,470
0
ATGAATGTATATTATCCTTATAAACAAGAATTGATCCTGGGCAATTCATAGGCTTTATAGCGTAATCAGCTTCATCTATCTTGGTAAAATACATATTTTCTTTATAATGATCCCAGTGGCCTGACTGATGCCATAAAGCTTCATTTAATA
29Clostridium acetobutylicum ATCC 824
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,709,800
1
CAACAATGAAATTGAGACAGAAATTTTAAAAAATTTTGAACTGAACAACAATTGTGATACAACCTAGTAAACCTCTGGGATACAGCAAAAGTGGTGCTGAGAGGAAAGTTCATAGCGTTAAATGTCTACATCAAAAAGCCTGAAACAGCA
120homo sapiens
G000007265
ASM726v1
GCF_000007265.1
PRJNA57943
SAMN02604013
null
2002/08/28
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/265/GCF_000007265.1_ASM726v1
637,000,285
RS_GCF_000007265.1
Monoisolate
Complete Genome
Full
reference genome
Major
208,435
1,311
Streptococcus agalactiae 2603V/R
strain=2603V/R
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus agalactiae
true
Eubacteria
Firmicutes
1
1
1
1
2,160,267
1
35.65
2,160,267
1
2,106
643,747
87.791509
100
0.18
0
298
yes
yes
yes
20
high
1,988,610
0
CTTTTACCGTGAACAATTACTATGGCTTTTGTGTATTTACGAAAACTCATTTTTAGTCCTCGCTTAAATTATGATCAAGAAATAAATCTGAAAAATCAATATCTAATGGATCTGGTACAGCACCAAAGAAACCAGACAAATATAATTTTT
91Streptococcus agalactiae 2603V/R
G000007525
ASM752v1
GCF_000007525.1
PRJNA57939
SAMN02603675
null
2005/01/21
Nestle Research Center, Switzerland
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/525/GCF_000007525.1_ASM752v1
637,000,031
RS_GCF_000007525.1
Monoisolate
Complete Genome
Full
reference genome
Major
206,672
216,816
Bifidobacterium longum NCC2705
strain=NCC2705
null
Bacteria
Actinobacteria
Actinobacteria
Bifidobacteriales
Bifidobacteriaceae
Bifidobacterium
Bifidobacterium longum
true
Eubacteria
Actinobacteria
1
0.996
0.9
1
2,260,266
2
60.13
2,256,640
1
1,833
667,063
86.967994
100
0
0
289
yes
yes
yes
20
high
839,410
0
TGCATCCGTGGTCCACACAGGCGCGCATAACACGCCAGATGGCATCAATATCGGATCGGACCTGGATGCCCGAGCGTGAAGCGGTTTCGTTGGCCCATACAAGTTCGGCGATGCTGAGATGATGTTCCCGGCATAACGACACCAGTTCAG
13Bifidobacterium longum NCC2705
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,677,250
1
GTGATGGTTCAGTAAAAGAATGTATAAAATGGCCAAGCGTGGTGGCTCATGCCTGTAATCCCAGCAATTTGGGAGGCCGAGACGGGCGTATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAATATGGTGAAACCCCATCTCTACT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,736,050
1
TATTTTGCCAAGGTTAAGGACGCACCAGTGATACAACCTCAGGAGGCCCTGATGACATGTTCCCGAGGTGGTCGGGGCACAGCTTGGTTTTATATATTTTAGGGAGGCATGAGACATCAGTCAGTACATGTAAGGTGTACATTGGTTTGG
120homo sapiens
G000008625
ASM862v1
GCF_000008625.1
PRJNA57765
SAMN02603207
null
1999/12/22
DIVERSA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/625/GCF_000008625.1_ASM862v1
637,000,010
RS_GCF_000008625.1
Monoisolate
Complete Genome
Full
reference genome
Major
224,324
63,363
Aquifex aeolicus VF5
strain=VF5
null
Bacteria
Aquificae
Aquificae
Aquificales
Aquificaceae
Aquifex
Aquifex aeolicus
true
Eubacteria
Bacteria
1
0.994
0.9
1
1,590,791
2
43.3
1,551,335
1
1,776
514,666
95.304851
98.98
1.22
75
317
yes
yes
yes
20
high
886,730
0
TCAAAATCTTTGTGTCAAGTCCAAAGAGCATTATTGTAAAATGACACTTATGAAGAAGTTCTACGTAACAACTCCCATATACTACGTGAACGACGTTCCGCACCTGGGACACGCTTACACAACGATAGCCGCGGACACGATAGCGCGCTA
2Aquifex aeolicus VF5
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,583,500
1
TATTTTTCTCTTTCATTTTTGCATGGCTCAGTGGAAGCAGCTAATGGGGGTTCAGCAGCAAGTTCTCTCCTCTTAAAGATGGGCTGAGCCTGACCTGCAGTTGCTTGAACAACTGGACAAGCCCTGGTGGGGCTGTGCATGCTGGTGGTG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,779,250
1
TGAGAGTTTGCAAAGTGTCAGGGAAGAGGGGAGGCAGCGTAAGGAACTTCCCTCTTGAGGTGACCCTGGCCTCCCCCTGCCAAGCTGGCAGGCCCCTCACAGAGCCTGGCTTCACCCCCTCCACCGACAAACCCTGGGTGTGTCAGCCTT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,187,200
1
AGGGTTTCAGTTTCATTATCACAGTGCTTTCCCAGACCTGATTAACCAGGCTCTGGTCCCTTTTCTCCTTACAAGACAACTTCTCACGTTCTCCAATTGCAACAGCAGCCCATTTCTGCAGACGGTAAATTGCCCCTTCCTGCCACTACG
120homo sapiens
G000007005
ASM700v1
GCF_000007005.1
PRJNA224116
SAMN02603227
null
2002/11/25
European/Canadian Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/005/GCF_000007005.1_ASM700v1
638,154,518
RS_GCF_000007005.1
Monoisolate
Complete Genome
Full
representative genome
Major
273,057
2,287
Sulfolobus solfataricus P2
strain=P2
null
Archaea
Crenarchaeota
Thermoprotei
Sulfolobales
Sulfolobaceae
Sulfolobus
Sulfolobus solfataricus
true
Archaea
Crenarchaeota
0.96
1
1
0.9
2,992,245
1
35.79
2,992,245
1
3,281
874,971
86.125133
100
0
0
196
no
yes
yes
14
medium
2,438,540
0
TTACCAGTAATCCTATGGCAAAAGTTGACATTAAAATGAATATGAACATTTCAGCAAGTATCACCGGAGATAAAATAAATTGACTAATGATGTTTGGGAATTGTGGTAAACCTACGGTATTTGTCGGTAAAGTTACTATTGTGAATGAGT
97Sulfolobus solfataricus P2
G000010305
ASM1030v1
GCF_000010305.1
PRJNA224116
SAMD00060909
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/305/GCF_000010305.1_ASM1030v1
643,692,024
RS_GCF_000010305.1
Monoisolate
Complete Genome
Full
representative genome
Major
379,066
173,480
Gemmatimonas aurantiaca T-27
strain=T-27
null
Bacteria
Gemmatimonadetes
Gemmatimonadetes
Gemmatimonadales
Gemmatimonadaceae
Gemmatimonas
Gemmatimonas aurantiaca
true
Eubacteria
FCB
1
1
1
1
4,636,964
1
64.27
4,636,964
1
4,004
1,466,180
93.177023
98.9
4.4
0
353
yes
yes
yes
20
high
2,158,910
0
ACGTCGAAGCGGGCGTGGTGTTTGTGGACGCGGATGCCCGCCCGCATCTGGCGACGTTCGGCACGGAGCCCGCGCCACTGTGGGCGGATTGTCTCGAGCAATTGTCCGCGACGCTGATCCCGCGCAACGCGGTCTATCGTGCGTGGACGC
42Gemmatimonas aurantiaca T-27
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,568,300
1
CACATCTTCTCCAACTGGAGAAATCACACTTGTTTTTCCAAATTCCTTACCTCCCTTCTATACTCCCACATCTCTCTTCCTGCTGTATTTTACTAACCCATGTGTAGATACTTATCTATATTTGTATATGTAGCCTGAATCTATATTAAA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,334,450
1
CCTGAGCGCTGTCCTGTGTGGCCCAGGGCTCTGGGGGGCTGACCGCACTGCTCTGGGCTGCCCCTGAGAATGCCTCCCCGGCCCCAGGGAAAATATCAGGAAAAATGCCTCACCCCAGTGGCATCTCCGCTGCTCCACCAAACAGCCTCT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,686,800
1
TCAGAACCAGAAGGAGATATAGATTAAGTTTATTTCAAGGAATCGGCTTACGTGATTGTGGGGGCTGGCTAGGCAAGTCTGAAATCCAGAGGGCAGGCCAGCAGGCCGGAAGCTCCCCGGAGGAGCTGACACTGCAGTCCCCAGGCAGGA
120homo sapiens
G000010825
ASM1082v1
GCF_000010825.1
PRJNA224116
SAMD00060943
null
2009/08/26
Acetobacter pasteurianus genome sequencing consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/825/GCF_000010825.1_ASM1082v1
644,736,321
RS_GCF_000010825.1
Monoisolate
Complete Genome
Full
representative genome
Major
634,452
438
Acetobacter pasteurianus IFO 3283-01
strain=IFO 3283 substr. IFO 3283-01
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhodospirillales
Acetobacteraceae
Acetobacter
Acetobacter pasteurianus
true
Eubacteria
Proteobacteria
1
0.982
0.9
1
3,340,249
7
53.1
2,907,495
1
3,156
1,006,859
88.810714
100
0
0
352
yes
yes
yes
20
high
1,592,890
0
CACGCACAACCGGGCTGATATGAGGTTCGGCTGGTAGCCTGTGGTAAAGAGTTGGATTATCGGCATGCGTCAGCACATACATAACGTGCGTGCCGCCTACACCCGGTGGATCATATAATCCTGCGCCTTCATGCCCGCGGCTTTTCAGGT
0Acetobacter pasteurianus IFO 3283-01 IFO 3283 substr. IFO 3283-01
G000006865
ASM686v1
GCF_000006865.1
PRJNA57671
SAMN02603339
null
2001/03/21
INRA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/865/GCF_000006865.1_ASM686v1
637,000,144
RS_GCF_000006865.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,623
1,358
Lactococcus lactis subsp. lactis Il1403
strain=IL1403
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Lactococcus
Lactococcus lactis
true
Eubacteria
Firmicutes
1
1
1
1
2,365,589
1
35.33
2,365,589
1
2,383
693,662
86.378488
100
0
0
310
yes
yes
yes
20
high
395,850
0
AATGATAAGGGAGAAAAAGTAAACTTCGAACGTAAGGGAAAAGTAGCTCGTGTTTTTATTGAAGAAACTGGAGCGACGGTTGCTTGGAATATTTTTGAAGCGAAATCTCTATTGGCTAATTTGTCAGGAAATGGTCAAGTCGTCTTATCA
54Lactococcus lactis subsp. lactis Il1403 IL1403
G000007345
ASM734v1
GCF_000007345.1
PRJNA224116
SAMN03081414
null
2002/04/03
Broad Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/345/GCF_000007345.1_ASM734v1
638,154,508
RS_GCF_000007345.1
Monoisolate
Complete Genome
Full
representative genome
Major
188,937
2,214
Methanosarcina acetivorans C2A
strain=C2A
null
Archaea
Euryarchaeota
Methanomicrobia
Methanosarcinales
Methanosarcinaceae
Methanosarcina
Methanosarcina acetivorans
true
Archaea
Euryarchaeota
0.98
1
0.8
0.9
5,751,492
1
42.68
5,751,492
1
4,884
1,470,904
75.340086
99.84
0.03
0
229
no
yes
yes
18
medium
5,534,750
0
TTCTGGAAGGGTATTACGCACCAGAGATCTACGTTATAAATAAGGATGCGGAACGATGACCATGACCCTGGAATATATCAAAAAACTGATGGGATGGTGTCCTAATGCTAAAGCATTTGAAACTAGGCGTTCCGTCTGCCCTGAATATCT
61Methanosarcina acetivorans C2A
G000010785
ASM1078v1
GCF_000010785.1
PRJNA224116
SAMD00060961
null
2010/02/11
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/785/GCF_000010785.1_ASM1078v1
646,311,936
RS_GCF_000010785.1
Monoisolate
Complete Genome
Full
representative genome
Major
608,538
940
Hydrogenobacter thermophilus TK-6
strain=TK-6
null
Bacteria
Aquificae
Aquificae
Aquificales
Aquificaceae
Hydrogenobacter
Hydrogenobacter thermophilus
true
Eubacteria
Bacteria
1
1
0.8
1
1,743,135
1
44
1,743,135
1
1,905
573,308
96.888881
98.78
0.51
0
310
yes
yes
yes
20
high
1,345,890
0
TACCAAGCATACAGATACATGAGAAGCTTAGAAGAGAAGCTTTCTGATTACATAGAAAACTCAGAAGTTTCAAAGATAAACAAAAATGCGGGAATAAAACCCGTTGCCGTGTCTGAGGAAACGCTGGAGGTCATAAAAAAAGCCCTTTAT
49Hydrogenobacter thermophilus TK-6 ASM1078v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,466,650
1
CCACACAGCCTCCAGGAAGCTTGAGCTTTGTTTTTCTGGCCTTTCATGATCTCCTCTGGCTCCCTGTGGCCCATCTGGGACTCTGGGTTTGGTGCTTGACTGCGGTATAGACTGACCAGTATTATGGCTTCATGCTTCTTGGCTGAGCTG
120homo sapiens
G000010345
ASM1034v1
GCF_000010345.1
PRJNA224116
SAMD00060915
null
2007/07/11
Japan Agency for Marine-Earth Science and Technology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/345/GCF_000010345.1_ASM1034v1
640,753,056
RS_GCF_000010345.1
Monoisolate
Complete Genome
Full
na
Major
387,093
387,093
Sulfurovum sp. NBC37-1
strain=NBC37-1
null
Bacteria
Proteobacteria
Epsilonproteobacteria
null
null
Sulfurovum
Sulfurovum sp. NBC37-1
true
Eubacteria
Proteobacteria
1
1
0.9
1
2,562,277
1
43.87
2,562,277
1
2,552
795,482
91.463999
99.59
0.61
0
334
yes
yes
yes
20
high
1,007,110
0
TTTATGATCTTGAAGCCCGCTTTTGGGCTTTTCCATGCCATGAAGATATCACCCTGCCGCAGTCTCGGTTTTCCTGAAAGAACCTCCTGCCAGGCGATCATCTTTTTGCCGTGTTTTGCAAGGATACTGTCCATTCTGCCAAAAAAATAA
98Sulfurovum sp. NBC37-1 ASM1034v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,250,600
1
GAAGCTGATACTATTGCTTTGTTACTTCTATGTTCATTCTAATTTCATAGAGAAAGCGCAGGCACCATGATCTGCACTGAATGGCTCCCTGCCTAAGGGAAGCTATTGTTTGCACAATGTCCTCAGCCAGGAAGCACAGCTCAGGTGGCA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,099,050
1
GAGCTTCACATCGGGGTCTGCGTGAAGCGCCCCATCTCCTGCCCCTGGTGGCGCAGCTCGGTACTGCCTCTGCGTCTCCTCCCTGGCGGGGTGACTGCGGCAGCCCCGGAACTGCCTTACCACAAAGGCCAGAGGCACGGTCTCATCCCA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
521,250
1
AAGGGCTGTGAGCAGCAGGGAGACGGAGGCCCTGGAGGACACAGCTCCAGTCTCTGCACAGGGACGGTCCACTCTCCGCACAGGGACGGTCCACTCTGTCACCCATTCCATGCTGGATTCAGGTCATGGCCTCACAAACTGACCAGGCTG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,071,200
1
TAGATGCTTTATCAGTATTAATAAGTATTCTAGATTAAAAAGAATGAAATATAAGTTTATACCTAATAATAACAAAGTAATTCCATGCCAATTACCAAGAAATCCATTCTTCCCAAATGTTAAAGGCAACAAATTCTAGAGTACAGAACA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,142,650
1
GTCACTAGTCTGGCAGAAATCTGTTTCTTGAGAGTTTGAATTAGCTGGGGAAATGGTTCTAAAACTCTGGTAAAAACTCTGGTAGAAAATGCAGGCTTGTCTAGAAAATGATTTAGTAAACTTTCTTTTTTTTTGGAATGGAAACTTGCT
120homo sapiens
G000007985
ASM798v2
GCF_000007985.2
PRJNA57743
SAMN02603989
null
2012/07/31
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/985/GCF_000007985.2_ASM798v2
637,000,120
RS_GCF_000007985.2
Monoisolate
Complete Genome
Full
reference genome
Major
243,231
35,554
Geobacter sulfurreducens PCA
strain=PCA
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfuromonadales
Geobacteraceae
Geobacter
Geobacter sulfurreducens
true
Eubacteria
Proteobacteria
1
1
1
1
3,814,128
1
60.94
3,814,128
1
3,417
1,176,369
90.878544
99.35
0
0
363
yes
yes
yes
20
high
1,020,630
0
TCCGCCAGGGCAGATGCCTGTTCCGCCTGGACCGGCGGCAGCCCCTTCCGGGCCACCCGGTCCGCGATCCGCACGCGATTATTGCGAATGGCGTTGTTGTCCTCCTTGAACTGGATCTTCTGGGCATCCTCCAGCGTTACCCAGGCCACC
43Geobacter sulfurreducens PCA
G000007005
ASM700v1
GCF_000007005.1
PRJNA224116
SAMN02603227
null
2002/11/25
European/Canadian Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/005/GCF_000007005.1_ASM700v1
638,154,518
RS_GCF_000007005.1
Monoisolate
Complete Genome
Full
representative genome
Major
273,057
2,287
Sulfolobus solfataricus P2
strain=P2
null
Archaea
Crenarchaeota
Thermoprotei
Sulfolobales
Sulfolobaceae
Sulfolobus
Sulfolobus solfataricus
true
Archaea
Crenarchaeota
0.96
1
1
0.9
2,992,245
1
35.79
2,992,245
1
3,281
874,971
86.125133
100
0
0
196
no
yes
yes
14
medium
2,175,290
0
TTGACCTGCTCTTCCTTCTTATGCCTCTTACTGTTTGTCGTGTACTCTCCGTCGAACTCCTCGTAGATCTTCACGTCCCCCACAGGGACTCCTATCACGAACTTGAACTGCGATATGAACTTGAGGACTTCCACGGTGTAGAATCCCGCG
97Sulfolobus solfataricus P2
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,648,000
1
GTGGGTTAGTTATCATGGAAGTGGGTTAGATAACATGGGAGTGGGTTAGTCATCATGGGAGTGGGTTAGTTATCGTGGGAGTGGGTTATCATGGGAGTGGGTTAGTCATCATGGGAGTGGGTTAGTTATCATGAGAGTGGGTTAGTGATC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,554,700
1
ACTGTCTCTCAGACCAAAGTGCAAACTAGAAGTCAGGATTAAGAAACTCACTCAAAACCACTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAAC
120homo sapiens
G000007345
ASM734v1
GCF_000007345.1
PRJNA224116
SAMN03081414
null
2002/04/03
Broad Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/345/GCF_000007345.1_ASM734v1
638,154,508
RS_GCF_000007345.1
Monoisolate
Complete Genome
Full
representative genome
Major
188,937
2,214
Methanosarcina acetivorans C2A
strain=C2A
null
Archaea
Euryarchaeota
Methanomicrobia
Methanosarcinales
Methanosarcinaceae
Methanosarcina
Methanosarcina acetivorans
true
Archaea
Euryarchaeota
0.98
1
0.8
0.9
5,751,492
1
42.68
5,751,492
1
4,884
1,470,904
75.340086
99.84
0.03
0
229
no
yes
yes
18
medium
3,398,720
0
TACCTGTCCTGCCGCTGGTTACGTTTGTTTCCAGGAGTGTCCGGTTTCCTTCCATAATCCAGGGCCAGACCTGTTCGTATTTTGGCTTAAAGCTGGCCCATCCGGTATAGCTGGGAGTATCTTCTGCGTATTTGTAAGCATATGAGAAAA
61Methanosarcina acetivorans C2A
G000008345
ASM834v1
GCF_000008345.1
PRJNA224116
SAMN02603281
null
2004/07/30
Goettingen Genomics Laboratory
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/345/GCF_000008345.1_ASM834v1
637,000,215
RS_GCF_000008345.1
Monoisolate
Complete Genome
Full
representative genome
Major
267,747
1,747
Propionibacterium acnes KPA171202
strain=KPA171202
null
Bacteria
Actinobacteria
Actinobacteria
Propionibacteriales
Propionibacteriaceae
Cutibacterium
Cutibacterium acnes
true
Eubacteria
Actinobacteria
1
1
1
1
2,560,265
1
60.01
2,560,265
1
2,373
780,330
89.799572
100
0
0
319
yes
yes
yes
20
high
1,401,920
0
TCGTGCGCAACAGGACGAATGGCATAATTAAATGCTGATTCCCCAAAGTTTTCCATAACCCAATCGTCGTTATATACTCCATCCAGATACCTTTCACCAAGATCCGGCGCAATAATGACAACGCGGCTTCCCTCGGGAATTTTATCTCGA
77Propionibacterium acnes KPA171202
G000009345
ASM934v1
GCF_000009345.1
PRJNA57741
SAMEA1705958
null
2007/01/12
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/345/GCF_000009345.1_ASM934v1
640,069,335
RS_GCF_000009345.1
Monoisolate
Complete Genome
Full
reference genome
Major
393,305
630
Yersinia enterocolitica subsp. enterocolitica 8081
strain=8081
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia enterocolitica
true
Eubacteria
Proteobacteria
1
0.998
0.9
1
4,683,620
2
47.22
4,615,899
1
4,253
1,352,606
85.086813
99.95
0
0
373
yes
yes
yes
20
high
528,320
0
TCAAAGCGTGGTGAAACCAAACCGTACAGTGTCCAACCGAGGAAGGTGACAATCGCCCCCCAAGTCATGGCTTCCTGGCCTGAACTATAAAGCGCATAGAAGCTATACATCGCACCGATAAAGGCAATGATATTGGCTTTGCGCGCTTTT
115Yersinia enterocolitica subsp. enterocolitica 8081
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,390,800
1
TTGTGGTTCTCTCACTCTTCACTAAATGACCCAGGGGACATCCTGAGGGTATTGCTGGCAGTGGTCTTAGTCAGCAGAGGCAGGAGGAGCTTGTTATGCCATAAGAAGCTGCAGTCTTAGAAAAATCGCAAGGGATATAAGAGAGGGATA
120homo sapiens
G000009865
ASM986v1
GCF_000009865.1
PRJNA224116
SAMD00061066
null
2005/06/30
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/865/GCF_000009865.1_ASM986v1
642,555,160
RS_GCF_000009865.1
Monoisolate
Complete Genome
Full
representative genome
Major
279,808
1,283
Staphylococcus haemolyticus JCSC1435
null
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Staphylococcus
Staphylococcus haemolyticus
true
Eubacteria
Firmicutes
1
0.989
1
1
2,697,861
4
32.78
2,685,015
1
2,600
785,925
85.820989
99.62
0
0
341
yes
yes
yes
20
high
2,466,360
0
GGAGATGCAACATGGATGCCTAAGTTTTTAGCAGCCATACCTAAGTGTAATTCTAATACTTGTCCGATGTTCATACGAGATGGTACACCAAGTGGGTTTAACATGATATCAATTGGACGTCCATCTGGTAAGTAAGGCATATCTTCTTCA
89Staphylococcus haemolyticus JCSC1435
G000009765
ASM976v2
GCF_000009765.2
PRJNA224116
SAMD00061088
null
2016/03/24
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2
637,000,304
RS_GCF_000009765.2
Monoisolate
Complete Genome
Full
representative genome
Minor
227,882
33,903
Streptomyces avermitilis MA-4680 = NBRC 14893
strain=MA-4680
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces avermitilis
true
Eubacteria
Actinobacteria
1
0.999
1
1
9,119,895
2
70.7
9,025,608
1
7,915
2,675,970
86.456522
99.89
0.79
0
356
yes
yes
yes
20
high
161,070
0
CCGAGTCGGCGGCCAAGGGCGGTCAACTGCCGGCGGCGCAAGGACAGCCCAGGTACGGCAGGCAGGTTGGCGAGGCTCGCAACGACAGGGAAGGCAGGCCCGACGGCCCCGGCGACCTCTGTGGCGACGCGACCTCGCGACGAAAGACCC
95Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
G000008565
ASM856v1
GCF_000008565.1
PRJNA57665
SAMN02603976
null
2000/12/11
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/565/GCF_000008565.1_ASM856v1
637,000,092
RS_GCF_000008565.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,230
1,299
Deinococcus radiodurans R1
strain=R1
null
Bacteria
Deinococcus-Thermus
Deinococci
Deinococcales
Deinococcaceae
Deinococcus
Deinococcus radiodurans
true
Eubacteria
Terrabacteria
1
0.991
0.8
1
3,284,156
4
66.61
2,648,638
1
3,248
987,980
88.625967
98.72
0
0
359
yes
yes
yes
20
high
248,170
0
GGGCCTGGGCTTTATCGCCCTCGCCGCGCTGATCTTCGGGCAGTGGAAACCGCTGGGCGTGCTCGGCGCCACCCTGCTTTTCGGGCTCTTGCAGGCCATCAGCATCGCGCTCGGCGGCAAGGACCTGCTGCCCGACCCGCTGGTCGGCGC
35Deinococcus radiodurans R1 ASM856v1
G000007705
ASM770v1
GCF_000007705.1
PRJNA224116
SAMN02603528
null
2003/08/22
LNCC, Brazil
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/705/GCF_000007705.1_ASM770v1
637,000,074
RS_GCF_000007705.1
Monoisolate
Complete Genome
Full
representative genome
Major
243,365
536
Chromobacterium violaceum ATCC 12472
strain=ATCC 12472
null
Bacteria
Proteobacteria
Betaproteobacteria
Neisseriales
Chromobacteriaceae
Chromobacterium
Chromobacterium violaceum
true
Eubacteria
Proteobacteria
1
1
0.9
1
4,751,080
1
64.83
4,751,080
1
4,298
1,428,392
88.582238
99.04
0.45
0
372
yes
yes
yes
20
high
4,566,250
0
CCGGCAGGCTGGATCCGGCCAATGGCCGCTACGTGCTCGCCACGCTGGACGCGGCGATAGACGGCTGCGTGTCCGGCGAGTTCGCCGCCATGGTGACCGCCCCGGTGCACAAAGGCGTGATCAACGACGCCGGCGTGCCGTTCACCGGCC
27Chromobacterium violaceum ATCC 12472
G000010605
ASM1060v1
GCF_000010605.1
PRJNA224116
SAMD00060929
null
2008/04/08
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
641,522,653
RS_GCF_000010605.1
Monoisolate
Complete Genome
Full
representative genome
Major
455,632
1,911
Streptomyces griseus subsp. griseus NBRC 13350
strain=NBRC 13350
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces griseus
true
Eubacteria
Actinobacteria
1
1
1
1
8,545,929
1
72.23
8,545,929
1
7,113
2,547,362
87.837226
99.84
0
0
357
yes
yes
yes
20
high
984,620
0
CGCATCTGATCAGCGCCTGGCGGTGGACCGCCCCCGAGGAACTGCCGTCCTCCCTGTTCGACCCGTCCGCACAGATCCTCGCGGCCTGGCGGCCGGAGCTGGGCATCGTCCACCCGCCCGCGCACGTGCTGCGGATCGCCCCCGACGGGG
96Streptomyces griseus subsp. griseus NBRC 13350
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,707,250
1
GGTGACAGGTGCCTGTAATCCCAGCTATTTGGAAGGCTGAGGTGGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCTGATACCATGCCACTACATTTCACATTTCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,847,750
1
GTCCCACATATCGCTCAGGCTCTTTTCCTTTGGTTTCAGCTTTTGGTTTTTGTTTTGTTTTGTTTTTTTTGAGATGGAGTCTCGCTCTGTCACCCAGCCTGGAGTGCAGTGGTGCAATCTCAGCTCACTACAAGCTCCGCCTCCCGGGTT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,856,600
1
TGTGGCTCACTGAACGCCAAGGGCTTAGAGAAAAGAATGAACGTGGGGTGGGTGTGCTTGCAATTCTGCGGAGAACAGCCAGGAGCCCCCATCTGACCCCTGCTCCTTAGGTCTTCAATCACCCCCAAGTTAGCACTGCTGAAAATGACC
120homo sapiens
G000006845
ASM684v1
GCF_000006845.1
PRJNA57611
SAMN02604088
null
2005/02/14
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/845/GCF_000006845.1_ASM684v1
637,000,188
RS_GCF_000006845.1
Monoisolate
Complete Genome
Full
reference genome
Major
242,231
485
Neisseria gonorrhoeae FA 1090
strain=FA 1090
null
Bacteria
Proteobacteria
Betaproteobacteria
Neisseriales
Neisseriaceae
Neisseria
Neisseria gonorrhoeae
true
Eubacteria
Proteobacteria
1
1
1
1
2,153,922
1
52.69
2,153,922
1
2,142
609,210
83.31778
99.82
0.21
0
323
yes
yes
yes
20
high
299,520
0
CTTATCCGATAACGAATGGAGTTTTCCCATGCCTAAAATGAAAACCAAGTCTAGCGCGAAAAAACGCTTTAAAGTACTGGGTAACGGCGGTGTGAAACGCGCTCATGCGTTCAAACGCCACATCTTGACTAAAAAGACCACCAAAAACAA
66Neisseria gonorrhoeae FA 1090
G000007565
ASM756v2
GCF_000007565.2
PRJNA57843
SAMN02603999
null
2016/02/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
637,000,222
RS_GCF_000007565.2
Multiisolate
Complete Genome
Full
reference genome
Major
160,488
303
Pseudomonas putida KT2440
strain=KT2440
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas putida
true
Eubacteria
Proteobacteria
1
1
0.9
1
6,181,873
1
61.52
6,181,873
1
5,584
1,861,131
88.706707
99.97
1.2
0
381
yes
yes
yes
20
high
1,198,340
0
GGCGCTGGATAACCTGGGCATGCCGGCAGCGGTATTGCAGGGCCTGCGCAGTTGCCTGGCGCGGCCCAACGGCATTGTGCTGTCCACCGGGCCGACCGGTTCGGGCAAGACCACGACCTTGTACGCCAGCCTGAACAGCCTCAACGATGG
78Pseudomonas putida KT2440
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,026,100
1
TGGGGGAAGACCCTCCCTGTCTGTGCTCCACAGCCCTCACCTGGCTCACCTGCGGACAGATGCGGGCTCGACAGCAAGCCCTACTGTGTCTTTCACTTCTTTAATACTGAAGTGGTGTTTTCTCAAAGGAAAAAATCCCCACCCAGTGGG
120homo sapiens
G000005825
ASM582v2
GCF_000005825.2
PRJNA224116
SAMN02603086
null
2010/12/15
Center for Genomic Sciences, Allegheny-Singer Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/825/GCF_000005825.2_ASM582v2
646,311,908
RS_GCF_000005825.2
Monoisolate
Complete Genome
Full
representative genome
Major
398,511
79,885
Bacillus pseudofirmus OF4
strain=OF4
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus pseudofirmus
true
Eubacteria
Firmicutes
1
0.995
1
1
4,249,248
3
39.86
3,858,997
1
4,260
1,228,222
85.144124
98.68
1.32
0
377
yes
yes
yes
20
high
3,723,590
0
TGGTGAATAAATCCTTTATATACAAAATAAAACCCGCCCCATTCTTCTTGGAGCAGGTTTGACTAAAAGTCGAGTAGATTATCTTTGGGCGGAGCTGGCTCATTTTGCTGCACGGAAGTTGAAATAATTTTTGTCTCGTTTGGATAAGTA
9Bacillus pseudofirmus OF4
G000010085
ASM1008v1
GCF_000010085.1
PRJNA224116
SAMD00061079
null
2006/01/10
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/085/GCF_000010085.1_ASM1008v1
637,000,270
RS_GCF_000010085.1
Monoisolate
Complete Genome
Full
representative genome
Major
343,509
63,612
Sodalis glossinidius str. 'morsitans'
strain=morsitans
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Pectobacteriaceae
Sodalis
Sodalis glossinidius
true
Eubacteria
Proteobacteria
1
0.993
1
1
4,292,502
4
54.5
4,171,146
1
5,742
1,142,020
78.310831
100
0
0
357
yes
yes
yes
20
high
1,768,650
0
CCCTGGAAGAGCCGCCGACCGATACCTATTTTCTGCTGGGCTGCCAGACACCATCGCGCCTGTTGCCGACGCTCAGAAGCCGCTGTCTCTATTGGCCGCTGCCGGCCCCGGATGAGGCGCTGGGTCTGCGCTGGTTACGACAGGCGGGTT
87Sodalis glossinidius str. 'morsitans' morsitans
G000006745
ASM674v1
GCF_000006745.1
PRJNA57623
SAMN02603969
null
2001/01/09
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/745/GCF_000006745.1_ASM674v1
637,000,333
RS_GCF_000006745.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,277
666
Vibrio cholerae O1 biovar El Tor str. N16961
strain=N16961
null
Bacteria
Proteobacteria
Gammaproteobacteria
Vibrionales
Vibrionaceae
Vibrio
Vibrio cholerae
true
Eubacteria
Proteobacteria
1
0.998
0.9
1
4,033,464
2
47.49
2,961,149
1
3,594
1,184,587
86.533164
99.86
0.03
0
360
yes
yes
yes
20
high
1,115,790
0
TATCCGCTCTTATGCGTTTGCCGCGATTGGCGTAGAAAAAGATATGCTGATGGGGCCTTCTTACGCCACTCCGATAGCCTTGGATCGCGCAGGCATCACCTTAAATGATCTCACCTTGATTGATATGCACGAAGCCTTTGCCGCGCAAAC
107Vibrio cholerae O1 biovar El Tor str. N16961
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,162,150
1
TAATGACTCAACCAGTCCTGTAGCCCCAGCCAGAGATAGATGGACCATTTCCTACACCCTGTGATTTTTATCCCCAACCAATCAGCAGCATCCATCCCCGAGCCCCTGCCACCAAACTGTCCTTGAAAAACCCCTAACCTCCGAGCTTTG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,485,900
1
GGAAGACACAATAAATAACTAAAGGCAAAATGCTAGAATGATGCGCTCTCTCTCAAGATGAAATATAGAACATGATTTATTTTTTATTTTTATTTTATTTTATTTTGAGACGGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGT
120homo sapiens
G000010165
ASM1016v1
GCF_000010165.1
PRJNA224116
SAMD00060942
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
643,692,011
RS_GCF_000010165.1
Monoisolate
Complete Genome
Full
representative genome
Major
358,681
1,393
Brevibacillus brevis NBRC 100599
strain=NBRC 100599 (= 47)
null
Bacteria
Firmicutes
Bacilli
Bacillales
Paenibacillaceae
Brevibacillus
Brevibacillus brevis
true
Eubacteria
Firmicutes
1
1
1
1
6,296,436
1
47.27
6,296,436
1
5,917
1,875,522
87.757979
99.73
0.27
0
381
yes
yes
yes
20
high
3,400,930
0
AACATAATCGAAGGCATCCATTTCCATCGGAACTGCCAGACGAAAAGGCATGGTGCTGGTAAACATCCCGAATATTTTGCGCTCCACTTTGCCTGAACGGTTTAACAGCGGCGTACCAATCACGATTTCTTCTTGCCTCGTACAACGCTG
15Brevibacillus brevis NBRC 100599
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,648,700
1
GTGCACGTGTGTGCTCAGTGTGGGGGGTGTGTGTGCATGTGCTTGGTATGGGGTGTGTGTGTGCACGTGTGTGCTCAGTGTGGGGTGTGTGTGCACGTGTGTTTGGTGTGGGGTGTGTCTGCACATGTGTGCTCGGTGTGGGTTGTGTGA
120homo sapiens