gonzalobenegas/sqtl · Datasets at Hugging Face

chrom stringclasses 23 values	pos int64 12k 248M	ref stringclasses 4 values	alt stringclasses 4 values	pip float64 0 1	maf float64 0.01 0.5	consequence stringclasses 16 values	label bool 2 classes	tss_dist int64 0 5.43M	exon_dist int64 0 5.43M	match_group stringlengths 13 39
X	103,330,974	G	C	0.986844	0.452601	splice_polypyrimidine_tract_variant	true	735	0	splice_polypyrimidine_tract_variant_242
X	103,404,676	C	G	0.003579	0.403727	upstream_gene_variant	false	27,760	26,512	upstream_gene_variant_121
X	103,580,747	T	C	0.009732	0.022777	intron_variant	false	4,516	3,534	intron_variant_4242
X	103,604,118	T	G	0.009732	0.022777	intergenic_variant	false	3,331	3,331	intergenic_variant_837
X	103,683,140	G	A	0.969689	0.224798	intron_variant	true	3,557	1,539	intron_variant_4238
X	103,881,587	G	T	0.006139	0.349765	non_coding_transcript_exon_variant	false	37,307	37,307	non_coding_transcript_exon_variant_1114
X	104,019,882	A	G	0.924417	0.014634	intergenic_variant	true	6,174	6,174	intergenic_variant_844
X	107,065,063	G	A	0.001449	0.180124	3_prime_UTR_variant	false	51,701	0	3_prime_UTR_variant_438
X	107,089,790	G	T	0.001449	0.180124	intron_variant	false	26,974	951	intron_variant_4196
X	107,117,211	C	A	0.005356	0.226708	intron_variant	false	445	445	intron_variant_4218
X	107,119,168	T	C	0.944514	0.110665	upstream_gene_variant	true	346	346	upstream_gene_variant_123
X	107,146,969	A	G	0.005356	0.226708	intron_variant	false	7,263	772	intron_variant_4220
X	107,153,172	A	G	0.005356	0.226708	missense_variant	false	1,060	0	missense_variant_557
X	107,173,373	G	A	0.005356	0.226708	intron_variant	false	19,139	1,714	intron_variant_4192
X	107,206,413	G	T	0.003121	0.177019	5_prime_UTR_variant	false	18	0	5_prime_UTR_variant_299
X	107,271,911	C	G	0.003941	0.223602	upstream_gene_variant	false	64,763	27,664	upstream_gene_variant_122
X	107,272,895	G	C	0.006311	0.195652	non_coding_transcript_exon_variant	false	65,747	28,648	non_coding_transcript_exon_variant_1111
X	107,290,081	T	C	0.003941	0.223602	intergenic_variant	false	82,933	45,834	intergenic_variant_828
X	111,388,666	G	A	0.993323	0.101523	intron_variant	true	21,752	12,322	intron_variant_4239
X	115,593,515	C	T	1	0.15528	intron_variant	true	91	91	intron_variant_4240
X	118,676,868	C	T	0.991388	0.411454	intron_variant	true	6,233	131	intron_variant_4241
X	118,727,358	G	T	0.005981	0.397516	5_prime_UTR_variant	false	225	0	5_prime_UTR_variant_297
X	118,758,328	C	G	0.003772	0.255594	intron_variant	false	30,722	86	intron_variant_4195
X	119,144,594	G	A	0.953774	0.01919	intron_variant	true	5,983	2,877	intron_variant_4242
X	119,451,980	A	G	0.974151	0.167	non_coding_transcript_exon_variant	true	16,462	27	non_coding_transcript_exon_variant_1110
X	119,469,389	G	A	0.007585	0.045549	splice_donor_region_variant	false	945	270	splice_donor_region_variant_52
X	119,936,604	A	T	0.007473	0.471429	splice_region_variant	false	6,998	6	splice_region_variant_108
X	120,088,646	A	G	0.929233	0.083351	intron_variant	true	10,956	10,956	intron_variant_4243
X	120,117,350	T	C	0.009968	0.13676	intron_variant	false	1,437	1,437	intron_variant_4184
X	120,421,052	C	T	0.931015	0.389499	intergenic_variant	true	48,242	5,094	intergenic_variant_845
X	123,204,486	A	G	0.999968	0.047165	3_prime_UTR_variant	true	20,187	0	3_prime_UTR_variant_434
X	123,204,564	A	G	1	0.045643	3_prime_UTR_variant	true	20,265	0	3_prime_UTR_variant_435
X	123,601,370	G	C	0.999998	0.336269	3_prime_UTR_variant	true	12,182	0	3_prime_UTR_variant_436
X	123,908,574	G	A	0.003897	0.18806	3_prime_UTR_variant	false	48,302	0	3_prime_UTR_variant_437
X	130,338,788	A	G	0.956233	0.419255	intergenic_variant	true	1,098	1,098	intergenic_variant_846
X	131,795,275	C	T	0.008	0.31297	non_coding_transcript_exon_variant	false	216,376	216,376	non_coding_transcript_exon_variant_1099
X	134,476,316	A	G	0.003426	0.111842	intron_variant	false	16,151	952	intron_variant_4190
X	134,544,822	G	A	1	0.188943	non_coding_transcript_exon_variant	true	84,657	21,014	non_coding_transcript_exon_variant_1111
X	135,911,846	T	C	0.006177	0.251553	missense_variant	false	18,130	0	missense_variant_558
X	136,308,659	T	A	0.008425	0.431373	intron_variant	false	2,638	108	intron_variant_4225
X	137,244,638	C	T	0.009985	0.21322	intergenic_variant	false	210,643	210,643	intergenic_variant_833
X	141,896,464	C	T	0.99981	0.412195	5_prime_UTR_variant	true	229	0	5_prime_UTR_variant_301
X	142,293,779	T	C	0.90122	0.256592	intron_variant	true	88,489	88,489	intron_variant_4244
X	149,534,015	C	T	0.998254	0.027427	non_coding_transcript_exon_variant	true	80	0	non_coding_transcript_exon_variant_1112
X	150,014,957	G	A	0.006708	0.027383	non_coding_transcript_exon_variant	false	76,466	76,466	non_coding_transcript_exon_variant_1112
X	150,759,145	A	G	0.979114	0.418605	intron_variant	true	55,717	3,280	intron_variant_4245
X	150,770,869	C	A	0.943973	0.133663	intron_variant	true	43,993	500	intron_variant_4246
X	151,486,372	T	C	0.005845	0.409544	intergenic_variant	false	77,301	77,008	intergenic_variant_829
X	151,688,737	G	A	0.946447	0.464286	intergenic_variant	true	5,868	5,868	intergenic_variant_847
X	151,956,016	A	C	0.925704	0.363279	non_coding_transcript_exon_variant	true	18,658	156	non_coding_transcript_exon_variant_1113
X	151,957,499	A	G	0.999943	0.319899	splice_polypyrimidine_tract_variant	true	17,175	1,639	splice_polypyrimidine_tract_variant_243
X	151,961,350	G	A	1	0.18549	synonymous_variant	true	13,324	0	synonymous_variant_480
X	151,973,735	A	G	1	0.2677	intron_variant	true	939	833	intron_variant_4247
X	152,947,039	T	C	0.999992	0.076065	intron_variant	true	5,338	1,575	intron_variant_4248
X	152,963,989	G	A	0.93738	0.10559	intron_variant	true	22,288	40	intron_variant_4249
X	152,991,916	T	C	0.985784	0.279423	splice_region_variant	true	296	0	splice_region_variant_109
X	153,503,202	G	A	0.999567	0.047619	intron_variant	true	7,686	1,417	intron_variant_4250
X	153,503,691	G	C	1	0.318458	intron_variant	true	8,175	928	intron_variant_4251
X	153,505,665	T	G	0.999942	0.468036	intron_variant	true	10,149	196	intron_variant_4252
X	153,723,443	T	G	0.99822	0.056753	intron_variant	true	44	44	intron_variant_4253
X	153,771,717	G	A	0.953017	0.150423	intron_variant	true	3,040	62	intron_variant_4254
X	153,778,914	C	A	0.929991	0.176509	intron_variant	true	1,397	19	intron_variant_4255
X	153,796,101	G	C	0.918422	0.358633	non_coding_transcript_exon_variant	true	1,427	331	non_coding_transcript_exon_variant_1114
X	153,796,262	T	C	0.960548	0.021964	non_coding_transcript_exon_variant	true	1,588	170	non_coding_transcript_exon_variant_1115
X	153,807,864	G	A	1	0.122439	non_coding_transcript_exon_variant	true	13,190	476	non_coding_transcript_exon_variant_1116
X	153,874,994	C	T	0.998931	0.266917	intron_variant	true	851	765	intron_variant_4256
X	153,931,677	C	T	0.007914	0.246032	non_coding_transcript_exon_variant	false	3,258	392	non_coding_transcript_exon_variant_1102
X	153,937,937	A	G	0.009076	0.215152	intron_variant	false	2,276	1,832	intron_variant_4238
X	154,396,528	A	G	0.999673	0.182297	intron_variant	true	1,837	1,837	intron_variant_4257
X	154,412,069	T	C	1	0.226089	splice_polypyrimidine_tract_variant	true	12	0	splice_polypyrimidine_tract_variant_244
X	154,455,186	C	T	0.949511	0.087445	intergenic_variant	true	3,093	3,093	intergenic_variant_848
X	154,467,565	T	G	1	0.177796	synonymous_variant	true	9,284	0	synonymous_variant_481
X	154,473,373	G	A	0.925902	0.190372	3_prime_UTR_variant	true	5,906	0	3_prime_UTR_variant_437
X	154,477,925	C	G	0.906906	0.163367	3_prime_UTR_variant	true	1,354	0	3_prime_UTR_variant_438
X	154,480,849	G	A	1	0.291284	intergenic_variant	true	1,568	1,568	intergenic_variant_849
X	154,490,637	C	A	0.998292	0.236146	5_prime_UTR_variant	true	8	0	5_prime_UTR_variant_302
X	154,900,519	G	C	0.009303	0.017241	intron_variant	false	14,164	568	intron_variant_4221
X	155,285,375	C	T	0.008449	0.284723	intron_variant	false	20,884	5,307	intron_variant_4232
X	155,335,631	C	G	0.006108	0.28412	intron_variant	false	974	974	intron_variant_4256
X	155,717,274	G	T	0.003126	0.194275	intron_variant	false	1,822	1,751	intron_variant_4257
X	155,720,291	C	G	0.004336	0.19536	intron_variant	false	1,193	1,193	intron_variant_4178
X	156,021,873	C	T	0.999468	0.02333	non_coding_transcript_exon_variant	true	912	81	non_coding_transcript_exon_variant_1117

X

103,330,974

G

C

0.986844

0.452601

splice_polypyrimidine_tract_variant

true

735

0

splice_polypyrimidine_tract_variant_242

X

103,404,676

C

G

0.003579

0.403727

upstream_gene_variant

false

27,760

26,512

upstream_gene_variant_121

X

103,580,747

T

C

0.009732

0.022777

intron_variant

false

4,516

3,534

intron_variant_4242

X

103,604,118

T

G

0.009732

0.022777

intergenic_variant

false

3,331

intergenic_variant_837

X

103,683,140

G

A

0.969689

0.224798

intron_variant

true

3,557

1,539

intron_variant_4238

X

103,881,587

G

T

0.006139

0.349765

non_coding_transcript_exon_variant

false

37,307

non_coding_transcript_exon_variant_1114

X

104,019,882

A

G

0.924417

0.014634

intergenic_variant

true

6,174

intergenic_variant_844

X

107,065,063

G

A

0.001449

0.180124

3_prime_UTR_variant

false

51,701

0

3_prime_UTR_variant_438

X

107,089,790

G

T

0.001449

0.180124

intron_variant

false

26,974

951

intron_variant_4196

X

107,117,211

C

A

0.005356

0.226708

intron_variant

false

445

intron_variant_4218

X

107,119,168

T

C

0.944514

0.110665

upstream_gene_variant

true

346

upstream_gene_variant_123

X

107,146,969

A

G

0.005356

0.226708

intron_variant

false

7,263

772

intron_variant_4220

X

107,153,172

A

G

0.005356

0.226708

missense_variant

false

1,060

0

missense_variant_557

X

107,173,373

G

A

0.005356

0.226708

intron_variant

false

19,139

1,714

intron_variant_4192

X

107,206,413

G

T

0.003121

0.177019

5_prime_UTR_variant

false

18

0

5_prime_UTR_variant_299

X

107,271,911

C

G

0.003941

0.223602

upstream_gene_variant

false

64,763

27,664

upstream_gene_variant_122

X

107,272,895

G

C

0.006311

0.195652

non_coding_transcript_exon_variant

false

65,747

28,648

non_coding_transcript_exon_variant_1111

X

107,290,081

T

C

0.003941

0.223602

intergenic_variant

false

82,933

45,834

intergenic_variant_828

X

111,388,666

G

A

0.993323

0.101523

intron_variant

true

21,752

12,322

intron_variant_4239

X

115,593,515

C

T

1

0.15528

intron_variant

true

91

intron_variant_4240

X

118,676,868

C

T

0.991388

0.411454

intron_variant

true

6,233

131

intron_variant_4241

X

118,727,358

G

T

0.005981

0.397516

5_prime_UTR_variant

false

225

0

5_prime_UTR_variant_297

X

118,758,328

C

G

0.003772

0.255594

intron_variant

false

30,722

86

intron_variant_4195

X

119,144,594

G

A

0.953774

0.01919

intron_variant

true

5,983

2,877

intron_variant_4242

X

119,451,980

A

G

0.974151

0.167

non_coding_transcript_exon_variant

true

16,462

27

non_coding_transcript_exon_variant_1110

X

119,469,389

G

A

0.007585

0.045549

splice_donor_region_variant

false

945

270

splice_donor_region_variant_52

X

119,936,604

A

T

0.007473

0.471429

splice_region_variant

false

6,998

6

splice_region_variant_108

X

120,088,646

A

G

0.929233

0.083351

intron_variant

true

10,956

intron_variant_4243

X

120,117,350

T

C

0.009968

0.13676

intron_variant

false

1,437

intron_variant_4184

X

120,421,052

C

T

0.931015

0.389499

intergenic_variant

true

48,242

5,094

intergenic_variant_845

X

123,204,486

A

G

0.999968

0.047165

3_prime_UTR_variant

true

20,187

0

3_prime_UTR_variant_434

X

123,204,564

A

G

1

0.045643

3_prime_UTR_variant

true

20,265

0

3_prime_UTR_variant_435

X

123,601,370

G

C

0.999998

0.336269

3_prime_UTR_variant

true

12,182

0

3_prime_UTR_variant_436

X

123,908,574

G

A

0.003897

0.18806

3_prime_UTR_variant

false

48,302

0

3_prime_UTR_variant_437

X

130,338,788

A

G

0.956233

0.419255

intergenic_variant

true

1,098

intergenic_variant_846

X

131,795,275

C

T

0.008

0.31297

non_coding_transcript_exon_variant

false

216,376

non_coding_transcript_exon_variant_1099

X

134,476,316

A

G

0.003426

0.111842

intron_variant

false

16,151

952

intron_variant_4190

X

134,544,822

G

A

1

0.188943

non_coding_transcript_exon_variant

true

84,657

21,014

non_coding_transcript_exon_variant_1111

X

135,911,846

T

C

0.006177

0.251553

missense_variant

false

18,130

0

missense_variant_558

X

136,308,659

T

A

0.008425

0.431373

intron_variant

false

2,638

108

intron_variant_4225

X

137,244,638

C

T

0.009985

0.21322

intergenic_variant

false

210,643

intergenic_variant_833

X

141,896,464

C

T

0.99981

0.412195

5_prime_UTR_variant

true

229

0

5_prime_UTR_variant_301

X

142,293,779

T

C

0.90122

0.256592

intron_variant

true

88,489

intron_variant_4244

X

149,534,015

C

T

0.998254

0.027427

non_coding_transcript_exon_variant

true

80

0

non_coding_transcript_exon_variant_1112

X

150,014,957

G

A

0.006708

0.027383

non_coding_transcript_exon_variant

false

76,466

non_coding_transcript_exon_variant_1112

X

150,759,145

A

G

0.979114

0.418605

intron_variant

true

55,717

3,280

intron_variant_4245

X

150,770,869

C

A

0.943973

0.133663

intron_variant

true

43,993

500

intron_variant_4246

X

151,486,372

T

C

0.005845

0.409544

intergenic_variant

false

77,301

77,008

intergenic_variant_829

X

151,688,737

G

A

0.946447

0.464286

intergenic_variant

true

5,868

intergenic_variant_847

X

151,956,016

A

C

0.925704

0.363279

non_coding_transcript_exon_variant

true

18,658

156

non_coding_transcript_exon_variant_1113

X

151,957,499

A

G

0.999943

0.319899

splice_polypyrimidine_tract_variant

true

17,175

1,639

splice_polypyrimidine_tract_variant_243

X

151,961,350

G

A

1

0.18549

synonymous_variant

true

13,324

0

synonymous_variant_480

X

151,973,735

A

G

1

0.2677

intron_variant

true

939

833

intron_variant_4247

X

152,947,039

T

C

0.999992

0.076065

intron_variant

true

5,338

1,575

intron_variant_4248

X

152,963,989

G

A

0.93738

0.10559

intron_variant

true

22,288

40

intron_variant_4249

X

152,991,916

T

C

0.985784

0.279423

splice_region_variant

true

296

0

splice_region_variant_109

X

153,503,202

G

A

0.999567

0.047619

intron_variant

true

7,686

1,417

intron_variant_4250

X

153,503,691

G

C

1

0.318458

intron_variant

true

8,175

928

intron_variant_4251

X

153,505,665

T

G

0.999942

0.468036

intron_variant

true

10,149

196

intron_variant_4252

X

153,723,443

T

G

0.99822

0.056753

intron_variant

true

44

intron_variant_4253

X

153,771,717

G

A

0.953017

0.150423

intron_variant

true

3,040

62

intron_variant_4254

X

153,778,914

C

A

0.929991

0.176509

intron_variant

true

1,397

19

intron_variant_4255

X

153,796,101

G

C

0.918422

0.358633

non_coding_transcript_exon_variant

true

1,427

331

non_coding_transcript_exon_variant_1114

X

153,796,262

T

C

0.960548

0.021964

non_coding_transcript_exon_variant

true

1,588

170

non_coding_transcript_exon_variant_1115

X

153,807,864

G

A

1

0.122439

non_coding_transcript_exon_variant

true

13,190

476

non_coding_transcript_exon_variant_1116

X

153,874,994

C

T

0.998931

0.266917

intron_variant

true

851

765

intron_variant_4256

X

153,931,677

C

T

0.007914

0.246032

non_coding_transcript_exon_variant

false

3,258

392

non_coding_transcript_exon_variant_1102

X

153,937,937

A

G

0.009076

0.215152

intron_variant

false

2,276

1,832

intron_variant_4238

X

154,396,528

A

G

0.999673

0.182297

intron_variant

true

1,837

intron_variant_4257

X

154,412,069

T

C

1

0.226089

splice_polypyrimidine_tract_variant

true

12

0

splice_polypyrimidine_tract_variant_244

X

154,455,186

C

T

0.949511

0.087445

intergenic_variant

true

3,093

intergenic_variant_848

X

154,467,565

T

G

1

0.177796

synonymous_variant

true

9,284

0

synonymous_variant_481

X

154,473,373

G

A

0.925902

0.190372

3_prime_UTR_variant

true

5,906

0

3_prime_UTR_variant_437

X

154,477,925

C

G

0.906906

0.163367

3_prime_UTR_variant

true

1,354

0

3_prime_UTR_variant_438

X

154,480,849

G

A

1

0.291284

intergenic_variant

true

1,568

intergenic_variant_849

X

154,490,637

C

A

0.998292

0.236146

5_prime_UTR_variant

true

8

0

5_prime_UTR_variant_302

X

154,900,519

G

C

0.009303

0.017241

intron_variant

false

14,164

568

intron_variant_4221

X

155,285,375

C

T

0.008449

0.284723

intron_variant

false

20,884

5,307

intron_variant_4232

X

155,335,631

C

G

0.006108

0.28412

intron_variant

false

974

intron_variant_4256

X

155,717,274

G

T

0.003126

0.194275

intron_variant

false

1,822

1,751

intron_variant_4257

X

155,720,291

C

G

0.004336

0.19536

intron_variant

false

1,193

intron_variant_4178

X

156,021,873

C

T

0.999468

0.02333

non_coding_transcript_exon_variant

true

912

81

non_coding_transcript_exon_variant_1117