Datasets:

anz2

/

nasa-osdr

like 0

OSD-60

3

['metadata', 'microarray']

{'zip': ['GLDS-60_metadata_E-MTAB-3290-ISA.zip']}

GLDS-60_metadata_E-MTAB-3290-ISA.zip

OSD-60/version-3/metadata/GLDS-60_metadata_E-MTAB-3290-ISA.zip

['E-MTAB-3290/s_E-MTAB-3290_study_samples.txt', 'E-MTAB-3290/a_E-MTAB-3290_GeneChip_assay.txt', 'E-MTAB-3290/i_E-MTAB-3290_investigation.txt']

{'microarray': []}

E-MTAB-3290/s_E-MTAB-3290_study_samples.txt

OSD-608

1

['metadata', 'peripheral_quantitative_computed_tomography_pQCT']

{'zip': ['OSD-608_metadata_OSD-608-ISA.zip']}

OSD-608_metadata_OSD-608-ISA.zip

OSD-608/version-1/metadata/OSD-608_metadata_OSD-608-ISA.zip

['i_Investigation.txt', 's_OSD-608.txt', 'a_OSD-608_bone-microstructure_peripheral-quantitative-computed-tomography_xct research sa+(stratec).txt']

{'peripheral_quantitative_computed_tomography_pQCT': []}

s_OSD-608.txt

OSD-61

3

['array', 'metadata', 'microarray']

{'zip': ['GLDS-61_metadata_E-MTAB-2871-ISA.zip']}

GLDS-61_metadata_E-MTAB-2871-ISA.zip

OSD-61/version-3/metadata/GLDS-61_metadata_E-MTAB-2871-ISA.zip

['s_E-MTAB-2871_study_samples.txt', 'a_e-mtab-2871_transcription_profiling_DNA_microarray.txt', 'i_E-MTAB-2871_investigation.txt']

{'array': ['a_e-mtab-2871_transcription_profiling_DNA_microarray.txt'], 'microarray': ['a_e-mtab-2871_transcription_profiling_DNA_microarray.txt']}

s_E-MTAB-2871_study_samples.txt

OSD-612

1

['GsnATAC-Seq', 'GsnRNA-Seq', 'metadata', 'snATAC-Seq', 'snRNA-Seq']

{'zip': ['OSD-612_metadata_OSD-612-ISA.zip']}

OSD-612_metadata_OSD-612-ISA.zip

OSD-612/version-1/metadata/OSD-612_metadata_OSD-612-ISA.zip

['a_OSD-612_chromatin-accessibility_single-cell-atac-seq_illumina.txt', 'a_OSD-612_transcription-profiling_single-cell-rna-sequencing_illumina.txt', 's_OSD-612.txt', 'i_Investigation.txt']

{'GsnATAC-Seq': [], 'GsnRNA-Seq': [], 'snATAC-Seq': [], 'snRNA-Seq': []}

s_OSD-612.txt

OSD-613

1

['GsnATAC-Seq', 'GsnRNA-Seq', 'metadata', 'snATAC-Seq', 'snRNA-Seq']

{'zip': ['OSD-613_metadata_OSD-613-ISA.zip']}

OSD-613_metadata_OSD-613-ISA.zip

OSD-613/version-1/metadata/OSD-613_metadata_OSD-613-ISA.zip

['s_OSD-613.txt', 'a_OSD-613_transcription-profiling_single-cell-rna-sequencing_illumina.txt', 'a_OSD-613_chromatin-accessibility_single-cell-atac-seq_illumina.txt', 'i_Investigation.txt']

{'GsnATAC-Seq': [], 'GsnRNA-Seq': [], 'snATAC-Seq': [], 'snRNA-Seq': []}

s_OSD-613.txt

OSD-618

1

['Balance_Beam', 'EPM', 'Novel_Object_Recognition', 'Open_Field', 'Radial_Arm_Water_Maze', 'Three_Chamber_Social_Test', 'metadata']

{'zip': ['OSD-618_metadata_OSD-618-ISA.zip']}

OSD-618_metadata_OSD-618-ISA.zip

OSD-618/version-1/metadata/OSD-618_metadata_OSD-618-ISA.zip

['a_OSD-618_behavior_rawm_radial arm water maze.txt', 's_OSD-618.txt', 'a_OSD-618_behavior_elevated-plus-maze_elevated plus maze.txt', 'a_OSD-618_behavior_three-chamber-social-isolation_three chamber social approach.txt', 'a_OSD-618_behavior_open-field_open field.txt', 'a_OSD-618_behavior_novel-object-recognition_novel object recognition.txt', 'i_Investigation.txt', 'a_OSD-618_behavior_balance_conduct science (me-bb-m01).txt']

{'Balance_Beam': [], 'EPM': [], 'Novel_Object_Recognition': [], 'Open_Field': [], 'Radial_Arm_Water_Maze': [], 'Three_Chamber_Social_Test': []}

s_OSD-618.txt

OSD-62

11

['array', 'metadata', 'microarray']

{'zip': ['GLDS-62_metadata_E-GEOD-64468-ISA.zip']}

GLDS-62_metadata_E-GEOD-64468-ISA.zip

OSD-62/version-11/metadata/GLDS-62_metadata_E-GEOD-64468-ISA.zip

['i_E-GEOD-64468_investigation.txt', 'a_E-GEOD-64468_GeneChip_assay.txt', 's_E-GEOD-64468_study_samples.txt']

{'array': [], 'microarray': []}

s_E-GEOD-64468_study_samples.txt

OSD-627

1

['metadata', 'microscopy']

{'zip': ['OSD-627_metadata_OSD-627-ISA.zip']}

OSD-627_metadata_OSD-627-ISA.zip

OSD-627/version-1/metadata/OSD-627_metadata_OSD-627-ISA.zip

['s_OSD-627.txt', 'a_OSD-627_molecular-cellular-imaging_confocal_nikon sim a1 laser scanning confocal microscope-inverted.txt', 'i_Investigation.txt']

{'microscopy': []}

s_OSD-627.txt

OSD-628

2

['metadata', 'microscopy']

{'zip': ['OSD-628_metadata_OSD-628-ISA.zip']}

OSD-628_metadata_OSD-628-ISA.zip

OSD-628/version-2/metadata/OSD-628_metadata_OSD-628-ISA.zip

['s_OSD-628.txt', 'a_OSD-628_molecular-cellular-imaging_confocal_nikon sim a1 laser scanning confocal microscope.txt', 'i_Investigation.txt']

{'microscopy': []}

s_OSD-628.txt

OSD-63

5

['array', 'metadata', 'microarray']

{'zip': ['GLDS-63_metadata_E-GEOD-12132-ISA.zip']}

GLDS-63_metadata_E-GEOD-12132-ISA.zip

OSD-63/version-5/metadata/GLDS-63_metadata_E-GEOD-12132-ISA.zip

['s_E-GEOD-12132_study_samples.txt', 'a_E-GEOD-12132_GeneChip_assay.txt', 'i_E-GEOD-12132_investigation.txt']

{'array': [], 'microarray': []}

s_E-GEOD-12132_study_samples.txt

OSD-64

1

['metadata', 'sequencing']

{'zip': ['GLDS-64_metadata_MO-Bacillus-ISA.zip']}

GLDS-64_metadata_MO-Bacillus-ISA.zip

OSD-64/version-1/metadata/GLDS-64_metadata_MO-Bacillus-ISA.zip

['MO-Bacillus/a_mo-bacillus_genome_sequencing_nucleotide_sequencing.txt', 'MO-Bacillus/i_Investigation.txt', 'MO-Bacillus/s_MO-Bacillus.txt']

{'sequencing': ['MO-Bacillus/a_mo-bacillus_genome_sequencing_nucleotide_sequencing.txt']}

MO-Bacillus/s_MO-Bacillus.txt

OSD-640

2

['Flow_Cytometry', 'metadata']

{'zip': ['OSD-640_metadata_OSD-640-ISA 2.zip']}

OSD-640_metadata_OSD-640-ISA 2.zip

OSD-640/version-2/metadata/OSD-640_metadata_OSD-640-ISA 2.zip

['a_OSD-640_flow-cytometry_flow-cytometry_facs canto2(becton dickinson)-1.txt', 'i_Investigation.txt', 's_OSD-640.txt']

{'Flow_Cytometry': []}

s_OSD-640.txt

OSD-65

1

['metadata', 'sequencing']

{'csv': ['GLDS-65_metadata_MT1_cultivable_microbial_diversity.csv', 'GLDS-65_metadata_MT1_metagenomics_barcodes.csv', 'GLDS-65_metadata_MT1_sample_codes.csv', 'GLDS-65_metadata_MT1_sample_locations.csv'], 'zip': ['GLDS-65_metadata_MT1-Diversity-ISA.zip'], 'txt': ['GLDS-65_metadata_MT1_microbial_diversity_protocol.txt']}

GLDS-65_metadata_MT1-Diversity-ISA.zip

OSD-65/version-1/metadata/GLDS-65_metadata_MT1-Diversity-ISA.zip

['MT1-Diversity/a_mt1-microbial_diversity_metagenome_sequencing_nucleotide_sequencing.txt', 'MT1-Diversity/i_Investigation.txt', 'MT1-Diversity/s_MT1-Microbial Diversity.txt']

{'sequencing': ['MT1-Diversity/a_mt1-microbial_diversity_metagenome_sequencing_nucleotide_sequencing.txt']}

MT1-Diversity/s_MT1-Microbial Diversity.txt

OSD-654

1

['Bone_Biomechanical', 'metadata', 'microCT']

{'zip': ['OSD-654_metadata_OSD-654-ISA.zip']}

OSD-654_metadata_OSD-654-ISA.zip

OSD-654/version-1/metadata/OSD-654_metadata_OSD-654-ISA.zip

['a_OSD-654_bone-microstructure_micro-computed-tomography_skyscan 1176 v1 build 12.txt', 'a_OSD-654_bone-microstructure_dual-energy-x-ray-absorptiometry_osteosys insight.txt', 's_OSD-654.txt', 'i_Investigation.txt']

{'Bone_Biomechanical': [], 'microCT': []}

s_OSD-654.txt

OSD-66

1

['metadata', 'sequencing']

{'csv': ['GLDS-66_metadata_MT1_cultivable_microbial_diversity.csv', 'GLDS-66_metadata_MT1_metagenomics_barcodes.csv', 'GLDS-66_metadata_MT1_sample_codes.csv', 'GLDS-66_metadata_MT1_sample_locations.csv'], 'zip': ['GLDS-66_metadata_MT1-Antimicrobial-ISA.zip'], 'txt': ['GLDS-66_metadata_MT1_antibiotic_resistance_genes_protocol.txt']}

GLDS-66_metadata_MT1-Antimicrobial-ISA.zip

OSD-66/version-1/metadata/GLDS-66_metadata_MT1-Antimicrobial-ISA.zip

['a_mt-1_antimicrobial_resistance_environmental_gene_survey_nucleotide_sequencing.txt', 'i_Investigation.txt', 's_MT-1_Antimicrobial_Resistance.txt']

{'sequencing': ['a_mt-1_antimicrobial_resistance_environmental_gene_survey_nucleotide_sequencing.txt']}

s_MT-1_Antimicrobial_Resistance.txt

OSD-660

1

['metadata', 'western-blot']

{'zip': ['OSD-660_metadata_OSD-660-ISA.zip']}

OSD-660_metadata_OSD-660-ISA.zip

OSD-660/version-1/metadata/OSD-660_metadata_OSD-660-ISA.zip

['a_OSD-660_protein-quantification_western-blot_BioRad ChemiDoc.txt', 's_OSD-660.txt', 'i_Investigation.txt']

{'western-blot': ['a_OSD-660_protein-quantification_western-blot_BioRad ChemiDoc.txt']}

s_OSD-660.txt

OSD-67

1

['metadata', 'sequencing']

{'csv': ['GLDS-67_metadata_MT1_cultivable_microbial_diversity.csv', 'GLDS-67_metadata_MT1_metagenomics_barcodes.csv', 'GLDS-67_metadata_MT1_sample_codes.csv', 'GLDS-67_metadata_MT1_sample_locations.csv'], 'zip': ['GLDS-67_metadata_MO-BSL-2-ISA.zip']}

GLDS-67_metadata_MO-BSL-2-ISA.zip

OSD-67/version-1/metadata/GLDS-67_metadata_MO-BSL-2-ISA.zip

['MO-BSL-2/a_mo-bsl-2_genome_sequencing_nucleotide_sequencing.txt', 'MO-BSL-2/i_Investigation.txt', 'MO-BSL-2/s_MO-BSL-2.txt']

{'sequencing': ['MO-BSL-2/a_mo-bsl-2_genome_sequencing_nucleotide_sequencing.txt']}

MO-BSL-2/s_MO-BSL-2.txt

OSD-68

1

['metadata', 'sequencing']

{'csv': ['GLDS-68_metadata_MT1_cultivable_microbial_diversity.csv', 'GLDS-68_metadata_MT1_metagenomics_barcodes.csv', 'GLDS-68_metadata_MT1_sample_codes.csv', 'GLDS-68_metadata_MT1_sample_locations.csv'], 'zip': ['GLDS-68_metadata_MO-Aspergillus-ISA.zip']}

GLDS-68_metadata_MO-Aspergillus-ISA.zip

OSD-68/version-1/metadata/GLDS-68_metadata_MO-Aspergillus-ISA.zip

['MO-Aspergillus/a_mo-aspergillus_genome_sequencing_nucleotide_sequencing.txt', 'MO-Aspergillus/i_Investigation.txt', 'MO-Aspergillus/s_MO-Aspergillus.txt']

{'sequencing': ['MO-Aspergillus/a_mo-aspergillus_genome_sequencing_nucleotide_sequencing.txt']}

MO-Aspergillus/s_MO-Aspergillus.txt

OSD-69

5

['GMetagenomics', 'metadata', 'metagenomics']

{'zip': ['GLDS-69_metadata_MT-1_Metagenomics-ISA.zip']}

GLDS-69_metadata_MT-1_Metagenomics-ISA.zip

OSD-69/version-5/metadata/GLDS-69_metadata_MT-1_Metagenomics-ISA.zip

['s_MT-1_Metagenomics.txt', 'a_mt-1_metagenomics_metagenome_sequencing_nucleotide_sequencing.txt', 'i_Investigation.txt']

{'GMetagenomics': [], 'metagenomics': ['s_MT-1_Metagenomics.txt', 'a_mt-1_metagenomics_metagenome_sequencing_nucleotide_sequencing.txt']}

s_MT-1_Metagenomics.txt

OSD-7

4

['array', 'metadata', 'microarray']

{'zip': ['GLDS-7_metadata_E-MTAB-1264-ISA.zip']}

GLDS-7_metadata_E-MTAB-1264-ISA.zip

OSD-7/version-4/metadata/GLDS-7_metadata_E-MTAB-1264-ISA.zip

['s_E-MTAB-1264_study_samples.txt', 'a_E-MTAB-1264_GeneChip_assay.txt', 'i_E-MTAB-1264_investigation.txt']

{'array': [], 'microarray': []}

s_E-MTAB-1264_study_samples.txt

OSD-70

3

['array', 'metadata', 'microarray']

{'zip': ['GLDS-70_metadata_GSE33779-ISA.zip']}

GLDS-70_metadata_GSE33779-ISA.zip

OSD-70/version-3/metadata/GLDS-70_metadata_GSE33779-ISA.zip

['s_GSE33779.txt', 'a_gse33779_transcription_profiling_DNA_microarray.txt', 'i_Investigation.txt']

{'array': ['a_gse33779_transcription_profiling_DNA_microarray.txt'], 'microarray': ['a_gse33779_transcription_profiling_DNA_microarray.txt']}

s_GSE33779.txt

OSD-71

4

['array', 'metadata', 'microarray']

{'zip': ['GLDS-71_metadata_E-GEOD-64375-ISA.zip']}

GLDS-71_metadata_E-GEOD-64375-ISA.zip

OSD-71/version-4/metadata/GLDS-71_metadata_E-GEOD-64375-ISA.zip

['s_E-GEOD-64375.txt', 'a_e-geod-64375_transcription_profiling_DNA_microarray.txt', 'i_Investigation.txt']

{'array': ['a_e-geod-64375_transcription_profiling_DNA_microarray.txt'], 'microarray': ['a_e-geod-64375_transcription_profiling_DNA_microarray.txt']}

s_E-GEOD-64375.txt

OSD-72

2

['Amplicon', 'GAmplicon', 'metadata']

{'zip': ['GLDS-72_metadata_GLDS-72-ISA.zip']}

GLDS-72_metadata_GLDS-72-ISA.zip

OSD-72/version-2/metadata/GLDS-72_metadata_GLDS-72-ISA.zip

['i_Investigation.txt', 'a_gse68738_metagenome_profiling_amplicon_sequencing_assay.txt', 's_GSE68738.txt']

{'Amplicon': ['a_gse68738_metagenome_profiling_amplicon_sequencing_assay.txt'], 'GAmplicon': []}

s_GSE68738.txt

OSD-73

1

['metadata', 'microarray']

{'zip': ['GLDS-73_metadata_E-GEOD-44282-ISA.zip']}

GLDS-73_metadata_E-GEOD-44282-ISA.zip

OSD-73/version-1/metadata/GLDS-73_metadata_E-GEOD-44282-ISA.zip

['E-GEOD-44282/a_E-GEOD-44282_GeneChip_assay.txt', 'E-GEOD-44282/i_E-GEOD-44282_investigation.txt', 'E-GEOD-44282/s_E-GEOD-44282_study_samples.txt']

{'microarray': []}

E-GEOD-44282/s_E-GEOD-44282_study_samples.txt

OSD-74

5

['array', 'metadata', 'microarray']

{'zip': ['GLDS-74_metadata_GLDS-74-ISA.zip']}

GLDS-74_metadata_GLDS-74-ISA.zip

OSD-74/version-5/metadata/GLDS-74_metadata_GLDS-74-ISA.zip

['s_E-GEOD-56704_study_samples.txt', 'a_E-GEOD-56704_GeneChip_assay.txt', 'i_E-GEOD-56704_investigation.txt']

{'array': [], 'microarray': []}

s_E-GEOD-56704_study_samples.txt

OSD-75

1

['metadata', 'microarray']

{'zip': ['GLDS-75_metadata_GSE27288-ISA.zip']}

GLDS-75_metadata_GSE27288-ISA.zip

OSD-75/version-1/metadata/GLDS-75_metadata_GSE27288-ISA.zip

['GSE27288/a_gse27288_transcription_profiling_DNA_microarray.txt', 'GSE27288/i_Investigation.txt', 'GSE27288/s_GSE27288.txt']

{'microarray': ['GSE27288/a_gse27288_transcription_profiling_DNA_microarray.txt']}

GSE27288/s_GSE27288.txt

OSD-76

1

['metadata', 'microarray']

{'zip': ['GLDS-76_metadata_E-MTAB-4476-ISA.zip']}

GLDS-76_metadata_E-MTAB-4476-ISA.zip

OSD-76/version-1/metadata/GLDS-76_metadata_E-MTAB-4476-ISA.zip

['E-MTAB-4476/a_e-mtab-4476_transcription_profiling_DNA_microarray.txt', 'E-MTAB-4476/i_Investigation.txt', 'E-MTAB-4476/s_E-MTAB-4476.txt']

{'microarray': ['E-MTAB-4476/a_e-mtab-4476_transcription_profiling_DNA_microarray.txt']}

E-MTAB-4476/s_E-MTAB-4476.txt

OSD-78

5

['array', 'metadata', 'microarray']

{'zip': ['GLDS-78_metadata_E-GEOD-8240-ISA.zip']}

GLDS-78_metadata_E-GEOD-8240-ISA.zip

OSD-78/version-5/metadata/GLDS-78_metadata_E-GEOD-8240-ISA.zip

['s_E-GEOD-8240.txt', 'a_e-geod-8240_transcription_profiling_DNA_microarray.txt', 'i_Investigation.txt']

{'array': ['a_e-geod-8240_transcription_profiling_DNA_microarray.txt'], 'microarray': ['a_e-geod-8240_transcription_profiling_DNA_microarray.txt']}

s_E-GEOD-8240.txt

OSD-79

1

['metadata', 'microarray']

{'zip': ['GLDS-79_metadata_E-GEOD-42742-ISA.zip']}

GLDS-79_metadata_E-GEOD-42742-ISA.zip

OSD-79/version-1/metadata/GLDS-79_metadata_E-GEOD-42742-ISA.zip

['E-GEOD-42742/._i_Investigation.txt', 'E-GEOD-42742/a_e-geod-42742_transcription_profiling_DNA_microarray.txt', 'E-GEOD-42742/i_Investigation.txt', 'E-GEOD-42742/s_E-GEOD-42742.txt']

{'microarray': ['E-GEOD-42742/a_e-geod-42742_transcription_profiling_DNA_microarray.txt']}

E-GEOD-42742/s_E-GEOD-42742.txt

OSD-8

2

['metadata', 'microarray']

{'zip': ['GLDS-8_metadata_GLDS-8-ISA.zip']}

GLDS-8_metadata_GLDS-8-ISA.zip

OSD-8/version-2/metadata/GLDS-8_metadata_GLDS-8-ISA.zip

['s_GLDS-8.txt', 'i_Investigation.txt', 'a_GLDS-8_transcription-profiling_dna-microarray_agilent.txt']

{'microarray': ['a_GLDS-8_transcription-profiling_dna-microarray_agilent.txt']}

s_GLDS-8.txt

OSD-80

3

['array', 'metadata', 'microarray']

{'zip': ['GLDS-80_metadata_E-GEOD-48392-ISA.zip']}

GLDS-80_metadata_E-GEOD-48392-ISA.zip

OSD-80/version-3/metadata/GLDS-80_metadata_E-GEOD-48392-ISA.zip

['s_GSE48392.txt', 'i_Investigation.txt', 'a_gse48392_transcription_profiling_DNA_microarray.txt']

{'array': ['a_gse48392_transcription_profiling_DNA_microarray.txt'], 'microarray': ['a_gse48392_transcription_profiling_DNA_microarray.txt']}

s_GSE48392.txt

OSD-81

1

['metadata', 'microarray']

{'zip': ['GLDS-81_metadata_E-GEOD-50653-ISA.zip']}

GLDS-81_metadata_E-GEOD-50653-ISA.zip

OSD-81/version-1/metadata/GLDS-81_metadata_E-GEOD-50653-ISA.zip

['E-GEOD-50653/a_E-GEOD-50653_GeneChip_assay.txt', 'E-GEOD-50653/i_Investigation.txt', 'E-GEOD-50653/s_E-GEOD-50653_study_samples.txt']

{'microarray': []}

E-GEOD-50653/s_E-GEOD-50653_study_samples.txt

OSD-82

1

['metadata', 'sequencing']

{'zip': ['GLDS-82_metadata_PRJDB4280-ISA.zip']}

GLDS-82_metadata_PRJDB4280-ISA.zip

OSD-82/version-1/metadata/GLDS-82_metadata_PRJDB4280-ISA.zip

['PRJDB4280/i_Investigation.txt', 'PRJDB4280/a_metagenomics.txt', 'PRJDB4280/s_PRJDB4280.txt']

{'sequencing': []}

PRJDB4280/s_PRJDB4280.txt

OSD-83

4

['metadata', 'rna-seq', 'rna_seq']

{'zip': ['GLDS-83_metadata_GLDS-83-ISA.zip']}

GLDS-83_metadata_GLDS-83-ISA.zip

OSD-83/version-4/metadata/GLDS-83_metadata_GLDS-83-ISA.zip

['s_DRA003542.txt', 'a_dra003542_transcription_profiling_RNA_Sequencing_(RNA-Seq).txt', 'i_Investigation.txt']

{'rna-seq': ['a_dra003542_transcription_profiling_RNA_Sequencing_(RNA-Seq).txt'], 'rna_seq': ['a_dra003542_transcription_profiling_RNA_Sequencing_(RNA-Seq).txt']}

s_DRA003542.txt

OSD-84

2

['Illumina sequencing', 'PacBio sequencing', 'metadata', 'sequencing']

{'zip': ['GLDS-84_metadata_Burton_Nanopore-ISA.zip']}

GLDS-84_metadata_Burton_Nanopore-ISA.zip

OSD-84/version-2/metadata/GLDS-84_metadata_Burton_Nanopore-ISA.zip

['a_burton_nanopore_genome_sequencing_nucleotide_sequencing.txt', 'a_illumina_biomolecule_sequencer_genome_sequencing_nucleotide_sequencing.txt', 'a_pacbio_biomolecule_sequencer_genome_sequencing_nucleotide_sequencing.txt', 'i_Investigation.txt', 's_Burton_Nanopore.txt']

{'Illumina sequencing': [], 'PacBio sequencing': [], 'sequencing': ['a_burton_nanopore_genome_sequencing_nucleotide_sequencing.txt', 'a_illumina_biomolecule_sequencer_genome_sequencing_nucleotide_sequencing.txt', 'a_pacbio_biomolecule_sequencer_genome_sequencing_nucleotide_sequencing.txt']}

s_Burton_Nanopore.txt

OSD-85

7

['metadata', 'rna_seq', 'transcriptomics']

{'zip': ['GLDS-85_metadata_GLDS-85-ISA.zip']}

GLDS-85_metadata_GLDS-85-ISA.zip

OSD-85/version-7/metadata/GLDS-85_metadata_GLDS-85-ISA.zip

['a_gse80323_transcription_profiling_RNA_Sequencing_(RNA-Seq).txt', 'i_Investigation.txt', 's_GSE80323.txt']

{'rna_seq': ['a_gse80323_transcription_profiling_RNA_Sequencing_(RNA-Seq).txt'], 'transcriptomics': []}

s_GSE80323.txt

OSD-86

3

['epigenomics', 'metadata']

{'zip': ['GLDS-86_metadata_GSE65477-v1-ISA.zip']}

GLDS-86_metadata_GSE65477-v1-ISA.zip

OSD-86/version-3/metadata/GLDS-86_metadata_GSE65477-v1-ISA.zip

['a_gse65477_DNA_methylation_profiling_nucleotide_sequencing.txt', 's_GSE65477.txt', 'i_Investigation.txt']

{'epigenomics': []}

s_GSE65477.txt

OSD-87

4

['array', 'metadata', 'microarray']

{'zip': ['GLDS-87_metadata_Zanello_STS135-ISA.zip']}

GLDS-87_metadata_Zanello_STS135-ISA.zip

OSD-87/version-4/metadata/GLDS-87_metadata_Zanello_STS135-ISA.zip

['s_Zanello.txt', 'a_zanello_transcription_profiling_DNA_microarray.txt', 'i_Investigation.txt']

{'array': ['a_zanello_transcription_profiling_DNA_microarray.txt'], 'microarray': ['a_zanello_transcription_profiling_DNA_microarray.txt']}

s_Zanello.txt

OSD-88

1

['metadata', 'microarray']

{'zip': ['GLDS-88_metadata_E-GEOD-45606-ISA.zip']}

GLDS-88_metadata_E-GEOD-45606-ISA.zip

OSD-88/version-1/metadata/GLDS-88_metadata_E-GEOD-45606-ISA.zip

['E-GEOD-45606/a_e-geod-45606_transcription_profiling_DNA_microarray.txt', 'E-GEOD-45606/i_Investigation.txt', 'E-GEOD-45606/s_E-GEOD-45606.txt']

{'microarray': ['E-GEOD-45606/a_e-geod-45606_transcription_profiling_DNA_microarray.txt']}

E-GEOD-45606/s_E-GEOD-45606.txt

OSD-89

1

['metadata', 'microarray']

{'zip': ['GLDS-89_metadata_E-GEOD-67243-ISA.zip']}

GLDS-89_metadata_E-GEOD-67243-ISA.zip

OSD-89/version-1/metadata/GLDS-89_metadata_E-GEOD-67243-ISA.zip

['E-GEOD-67243/._i_Investigation.txt', 'E-GEOD-67243/a_e-geod-67243_transcription_profiling_DNA_microarray.txt', 'E-GEOD-67243/i_Investigation.txt', 'E-GEOD-67243/s_E-GEOD-67243.txt']

{'microarray': ['E-GEOD-67243/a_e-geod-67243_transcription_profiling_DNA_microarray.txt']}

E-GEOD-67243/s_E-GEOD-67243.txt

OSD-9

1

['metadata', 'microarray']

{'zip': ['GLDS-9_metadata_E-GEOD-16519-ISA.zip']}

GLDS-9_metadata_E-GEOD-16519-ISA.zip

OSD-9/version-1/metadata/GLDS-9_metadata_E-GEOD-16519-ISA.zip

['a_E-GEOD-16519_GeneChip_assay.txt', 'i_E-GEOD-16519_investigation.txt', 's_E-GEOD-16519_study_samples.txt']

{'microarray': []}

s_E-GEOD-16519_study_samples.txt

OSD-90

1

['metadata', 'sequencing']

{'zip': ['GLDS-90_metadata_Harrison_20161109-ISA.zip']}

GLDS-90_metadata_Harrison_20161109-ISA.zip

OSD-90/version-1/metadata/GLDS-90_metadata_Harrison_20161109-ISA.zip

['Harrison_20161109/a_Harrison_transcription_profiling_nucleotide_sequencing.txt', 'Harrison_20161109/i_Harrison_Investigation.txt', 'Harrison_20161109/s_Harrison.txt']

{'sequencing': ['Harrison_20161109/a_Harrison_transcription_profiling_nucleotide_sequencing.txt']}

Harrison_20161109/s_Harrison.txt

OSD-91

5

['metadata', 'rna-seq', 'rna_seq']

{'zip': ['OSD-91_metadata_OSD-91-ISA.zip']}

OSD-91_metadata_OSD-91-ISA.zip

OSD-91/version-5/metadata/OSD-91_metadata_OSD-91-ISA.zip

['s_GSE65943.txt', 'a_OSD-91_transcription-profiling_rna-sequencing-(rna-seq).txt', 'i_Investigation.txt']

{'rna-seq': ['a_OSD-91_transcription-profiling_rna-sequencing-(rna-seq).txt'], 'rna_seq': []}

s_GSE65943.txt

OSD-92

2

['metadata', 'microarray']

{'zip': ['GLDS-92_metadata_E-GEOD-16935-v1-ISA.zip']}

GLDS-92_metadata_E-GEOD-16935-v1-ISA.zip

OSD-92/version-2/metadata/GLDS-92_metadata_E-GEOD-16935-v1-ISA.zip

['a_e-geod-16935_transcription_profiling_DNA_microarray.txt', 'i_Investigation.txt', 's_E-GEOD-16935.txt']

{'microarray': ['a_e-geod-16935_transcription_profiling_DNA_microarray.txt']}

s_E-GEOD-16935.txt

OSD-93

2

['metadata', 'microarray']

{'zip': ['GLDS-93_metadata_E-GEOD-20959-v1-ISA.zip']}

GLDS-93_metadata_E-GEOD-20959-v1-ISA.zip

OSD-93/version-2/metadata/GLDS-93_metadata_E-GEOD-20959-v1-ISA.zip

['i_E-GEOD-20959_investigation.txt', 'a_E-GEOD-20959_GeneChip_assay.txt', 's_E-GEOD-20959_study_samples.txt']

{'microarray': []}

s_E-GEOD-20959_study_samples.txt

OSD-94

2

['metadata', 'microarray']

{'zip': ['GLDS-94_metadata_E-GEOD-37233-v1-ISA.zip'], 'adf.txt': ['GLDS-94_metadata_A-GEOD-10989.adf.txt', 'GLDS-94_metadata_A-GEOD-11620.adf.txt']}

GLDS-94_metadata_E-GEOD-37233-v1-ISA.zip

OSD-94/version-2/metadata/GLDS-94_metadata_E-GEOD-37233-v1-ISA.zip

['a_E-GEOD-37233_CGH-Chip_assay.txt', '__MACOSX/._a_E-GEOD-37233_CGH-Chip_assay.txt', 's_E-GEOD-37233_study_samples.txt', '__MACOSX/._s_E-GEOD-37233_study_samples.txt', 'i_E-GEOD-37233_investigation.txt', '__MACOSX/._i_E-GEOD-37233_investigation.txt']

{'microarray': []}

s_E-GEOD-37233_study_samples.txt

OSD-95

1

['metadata', 'sequencing']

{'zip': ['GLDS-95_metadata_GSE82341-ISA.zip']}

GLDS-95_metadata_GSE82341-ISA.zip

OSD-95/version-1/metadata/GLDS-95_metadata_GSE82341-ISA.zip

['GSE82341/a_gse82341_transcription_profiling_nucleotide_sequencing.txt', 'GSE82341/i_Investigation.txt', 'GSE82341/s_GSE82341.txt']

{'sequencing': ['GSE82341/a_gse82341_transcription_profiling_nucleotide_sequencing.txt']}

GSE82341/s_GSE82341.txt

OSD-96

6

['metadata', 'rna-seq', 'rna_seq']

{'zip': ['GLDS-96_metadata_GLDS-96-ISA.zip']}

GLDS-96_metadata_GLDS-96-ISA.zip

OSD-96/version-6/metadata/GLDS-96_metadata_GLDS-96-ISA.zip

['a_gse88866_transcription_profiling_RNA_Sequencing_(RNA-Seq).txt', 's_GSE88866.txt', 'i_Investigation.txt']

{'rna-seq': ['a_gse88866_transcription_profiling_RNA_Sequencing_(RNA-Seq).txt'], 'rna_seq': ['a_gse88866_transcription_profiling_RNA_Sequencing_(RNA-Seq).txt']}

s_GSE88866.txt

OSD-97

1

['metadata', 'microarray']

{'zip': ['GLDS-97_metadata_GSE9464-ISA.zip']}

GLDS-97_metadata_GSE9464-ISA.zip

OSD-97/version-1/metadata/GLDS-97_metadata_GSE9464-ISA.zip

['GSE9464/a_gse9464_transcription_profiling_DNA_microarray.txt', 'GSE9464/i_Investigation.txt', 'GSE9464/s_GSE9464.txt']

{'microarray': ['GSE9464/a_gse9464_transcription_profiling_DNA_microarray.txt']}

GSE9464/s_GSE9464.txt

OSD-98

8

['epigenomics', 'metadata', 'proteomics', 'rna_seq', 'transcriptomics']

{'zip': ['OSD-98_metadata_OSD-98-ISA.zip']}

OSD-98_metadata_OSD-98-ISA.zip

OSD-98/version-8/metadata/OSD-98_metadata_OSD-98-ISA.zip

['a_OSD-98_protein-expression-profiling_mass-spectrometry.txt', 'a_OSD-98_dna-methylation-profiling_nucleotide-sequencing.txt', 's_OSD-98.txt', 'i_Investigation.txt', 'a_OSD-98_transcription-profiling_rna-sequencing-(rna-seq).txt']

{'epigenomics': [], 'proteomics': [], 'rna_seq': [], 'transcriptomics': []}

s_OSD-98.txt

OSD-99

5

['design', 'epigenomics', 'metadata', 'rna_seq', 'transcriptomics']

{'zip': ['OSD-99_metadata_OSD-99-ISA.zip']}

OSD-99_metadata_OSD-99-ISA.zip

OSD-99/version-5/metadata/OSD-99_metadata_OSD-99-ISA.zip

['a_OSD-99_dna-methylation-profiling_nucleotide-sequencing_illumina.txt', 'a_OSD-99_transcription-profiling_rna-sequencing-(rna-seq).txt', 'i_Investigation.txt', 's_BIOBANK.txt']

{'design': [], 'epigenomics': [], 'rna_seq': [], 'transcriptomics': []}

s_BIOBANK.txt