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what is the histologic grade of the invasive carcinoma? A. grade 2 B. grade 3 C. grade 1 D. not specified | D. not specified | TCGA-EW-A1P5-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-EW-A1P5-01Z-00-DX1.B0D59A56-116E-48B3-BC90-237EA4B3F95B_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-EW-A1P5-01Z-00-DX1.B0D59A56-116E-48B3-BC90-237EA4B3F95B_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-EW-A1P5-01Z-00-DX1.B0D59A56-116E-48B3-BC90-237EA4B3F95B_1_1024.npy |
is lymphovascular invasion present in the breast? A. yes B. no C. not mentioned D. pending | B. no | TCGA-EW-A1P5-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-EW-A1P5-01Z-00-DX1.B0D59A56-116E-48B3-BC90-237EA4B3F95B_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-EW-A1P5-01Z-00-DX1.B0D59A56-116E-48B3-BC90-237EA4B3F95B_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-EW-A1P5-01Z-00-DX1.B0D59A56-116E-48B3-BC90-237EA4B3F95B_1_1024.npy |
which receptors are the tumor cells positive for? A. estrogen and progesterone B. her-2 C. keratin D. none of the above | A. estrogen and progesterone | TCGA-EW-A1P5-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-EW-A1P5-01Z-00-DX1.B0D59A56-116E-48B3-BC90-237EA4B3F95B_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-EW-A1P5-01Z-00-DX1.B0D59A56-116E-48B3-BC90-237EA4B3F95B_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-EW-A1P5-01Z-00-DX1.B0D59A56-116E-48B3-BC90-237EA4B3F95B_1_1024.npy |
is dermal lymph-vascular invasion identified? A. yes B. no C. not mentioned D. pending | B. no | TCGA-EW-A1P5-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-EW-A1P5-01Z-00-DX1.B0D59A56-116E-48B3-BC90-237EA4B3F95B_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-EW-A1P5-01Z-00-DX1.B0D59A56-116E-48B3-BC90-237EA4B3F95B_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-EW-A1P5-01Z-00-DX1.B0D59A56-116E-48B3-BC90-237EA4B3F95B_1_1024.npy |
what type of carcinoma did the patient have? A. infiltrating ductal carcinoma B. infiltrating lobular carcinoma C. ductal carcinoma in situ D. medullary carcinoma | A. infiltrating ductal carcinoma | TCGA-AR-A0TU-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A0TU-01Z-00-DX1.2CBBDDAB-C1DD-4205-A555-431542F9C069_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A0TU-01Z-00-DX1.2CBBDDAB-C1DD-4205-A555-431542F9C069_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A0TU-01Z-00-DX1.2CBBDDAB-C1DD-4205-A555-431542F9C069_1_1024.npy |
what is the nottingham grade of the carcinoma? A. grade i B. grade ii C. grade iii D. grade iv | C. grade iii | TCGA-AR-A0TU-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A0TU-01Z-00-DX1.2CBBDDAB-C1DD-4205-A555-431542F9C069_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A0TU-01Z-00-DX1.2CBBDDAB-C1DD-4205-A555-431542F9C069_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A0TU-01Z-00-DX1.2CBBDDAB-C1DD-4205-A555-431542F9C069_1_1024.npy |
what type of protein overexpression is negative? A. her2/neu B. brca1 C. tp53 D. egfr | A. her2/neu | TCGA-AR-A0TU-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A0TU-01Z-00-DX1.2CBBDDAB-C1DD-4205-A555-431542F9C069_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A0TU-01Z-00-DX1.2CBBDDAB-C1DD-4205-A555-431542F9C069_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A0TU-01Z-00-DX1.2CBBDDAB-C1DD-4205-A555-431542F9C069_1_1024.npy |
were the er and pr tests fda-approved? A. yes B. no C. partially D. not indicated | B. no | TCGA-AR-A0TU-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A0TU-01Z-00-DX1.2CBBDDAB-C1DD-4205-A555-431542F9C069_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A0TU-01Z-00-DX1.2CBBDDAB-C1DD-4205-A555-431542F9C069_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A0TU-01Z-00-DX1.2CBBDDAB-C1DD-4205-A555-431542F9C069_1_1024.npy |
what is the patient's gender? A. 43-year-old B. white female C. left femur fracture D. large breast mass | B. white female | TCGA-B6-A0I9-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I9-01Z-00-DX1.78E1D43A-507E-482E-B988-AF13B12B4497_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I9-01Z-00-DX1.78E1D43A-507E-482E-B988-AF13B12B4497_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I9-01Z-00-DX1.78E1D43A-507E-482E-B988-AF13B12B4497_1_1024.npy |
what is the suspected diagnosis of the breast mass? A. metastatic breast cancer B. intraductal carcinoma C. moderately differentiated carcinoma D. vascular invasion by carcinoma | A. metastatic breast cancer | TCGA-B6-A0I9-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I9-01Z-00-DX1.78E1D43A-507E-482E-B988-AF13B12B4497_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I9-01Z-00-DX1.78E1D43A-507E-482E-B988-AF13B12B4497_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I9-01Z-00-DX1.78E1D43A-507E-482E-B988-AF13B12B4497_1_1024.npy |
what types of carcinoma were present in the biopsy? A. infiltrating duct carcinoma B. solid and comedo types C. vascular invasion by carcinoma D. moderately differentiated carcinoma | B. solid and comedo types | TCGA-B6-A0I9-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I9-01Z-00-DX1.78E1D43A-507E-482E-B988-AF13B12B4497_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I9-01Z-00-DX1.78E1D43A-507E-482E-B988-AF13B12B4497_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I9-01Z-00-DX1.78E1D43A-507E-482E-B988-AF13B12B4497_1_1024.npy |
what was the nuclear grade of the carcinoma? A. moderately differentiated B. suspected to be metastatic C. 43-year-old D. left femur fracture | A. moderately differentiated | TCGA-B6-A0I9-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I9-01Z-00-DX1.78E1D43A-507E-482E-B988-AF13B12B4497_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I9-01Z-00-DX1.78E1D43A-507E-482E-B988-AF13B12B4497_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I9-01Z-00-DX1.78E1D43A-507E-482E-B988-AF13B12B4497_1_1024.npy |
what other feature was identified in the biopsy? A. left femur fracture B. yellow fibro-adipose tissue C. vascular invasion by carcinoma D. infiltrating duct carcinoma | C. vascular invasion by carcinoma | TCGA-B6-A0I9-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I9-01Z-00-DX1.78E1D43A-507E-482E-B988-AF13B12B4497_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I9-01Z-00-DX1.78E1D43A-507E-482E-B988-AF13B12B4497_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I9-01Z-00-DX1.78E1D43A-507E-482E-B988-AF13B12B4497_1_1024.npy |
when was the procedure performed? A. before the slide was written B. after the slide was written C. on the first day of the investigation D. on the second day of the investigation | A. before the slide was written | TCGA-BH-A1FJ-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FJ-01Z-00-DX1.BCED4CEF-2B33-45BA-ABC7-29BEE818F4A3_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FJ-01Z-00-DX1.BCED4CEF-2B33-45BA-ABC7-29BEE818F4A3_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FJ-01Z-00-DX1.BCED4CEF-2B33-45BA-ABC7-29BEE818F4A3_1_1024.npy |
what did the slide indicate about the nature of the potential tumor? A. benign B. unknown C. aggressively advancing D. cancerous | D. cancerous | TCGA-BH-A1FJ-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FJ-01Z-00-DX1.BCED4CEF-2B33-45BA-ABC7-29BEE818F4A3_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FJ-01Z-00-DX1.BCED4CEF-2B33-45BA-ABC7-29BEE818F4A3_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FJ-01Z-00-DX1.BCED4CEF-2B33-45BA-ABC7-29BEE818F4A3_1_1024.npy |
what is recommended in the slide regarding the investigation of the vascular space? A. no further investigation is necessary B. further investigate the vascular space C. ignore the potential tumor D. proceed with aggressive treatment immediately | B. further investigate the vascular space | TCGA-BH-A1FJ-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FJ-01Z-00-DX1.BCED4CEF-2B33-45BA-ABC7-29BEE818F4A3_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FJ-01Z-00-DX1.BCED4CEF-2B33-45BA-ABC7-29BEE818F4A3_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FJ-01Z-00-DX1.BCED4CEF-2B33-45BA-ABC7-29BEE818F4A3_1_1024.npy |
what is the status of the tumor's advancement according to the slide? A. advancing aggressively B. not aggressively advancing C. unknown D. in remission | B. not aggressively advancing | TCGA-BH-A1FJ-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FJ-01Z-00-DX1.BCED4CEF-2B33-45BA-ABC7-29BEE818F4A3_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FJ-01Z-00-DX1.BCED4CEF-2B33-45BA-ABC7-29BEE818F4A3_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FJ-01Z-00-DX1.BCED4CEF-2B33-45BA-ABC7-29BEE818F4A3_1_1024.npy |
what is mentioned about the margins of the tumor in the slide? A. unclear margins B. no information provided C. clear margins D. potentially dangerous margins | C. clear margins | TCGA-BH-A1FJ-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FJ-01Z-00-DX1.BCED4CEF-2B33-45BA-ABC7-29BEE818F4A3_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FJ-01Z-00-DX1.BCED4CEF-2B33-45BA-ABC7-29BEE818F4A3_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FJ-01Z-00-DX1.BCED4CEF-2B33-45BA-ABC7-29BEE818F4A3_1_1024.npy |
what is the result of the immunohistochemistry staining for estrogen receptor (er)? A. negative B. 1+ C. 3+ D. indeterminate | C. 3+ | TCGA-E9-A54Y-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-E9-A54Y-01Z-00-DX1.5FD70369-6514-4E5E-8BEF-65DAC5671E1A_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-E9-A54Y-01Z-00-DX1.5FD70369-6514-4E5E-8BEF-65DAC5671E1A_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-E9-A54Y-01Z-00-DX1.5FD70369-6514-4E5E-8BEF-65DAC5671E1A_1_1024.npy |
what is the result of the immunohistochemistry staining for her-2/neu? A. negative B. 1+ C. 3+ D. indeterminate | A. negative | TCGA-E9-A54Y-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-E9-A54Y-01Z-00-DX1.5FD70369-6514-4E5E-8BEF-65DAC5671E1A_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-E9-A54Y-01Z-00-DX1.5FD70369-6514-4E5E-8BEF-65DAC5671E1A_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-E9-A54Y-01Z-00-DX1.5FD70369-6514-4E5E-8BEF-65DAC5671E1A_1_1024.npy |
what is the tumor size classification based on the tnm system? A. t0 B. t1 C. t2 D. t3 | C. t2 | TCGA-E9-A54Y-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-E9-A54Y-01Z-00-DX1.5FD70369-6514-4E5E-8BEF-65DAC5671E1A_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-E9-A54Y-01Z-00-DX1.5FD70369-6514-4E5E-8BEF-65DAC5671E1A_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-E9-A54Y-01Z-00-DX1.5FD70369-6514-4E5E-8BEF-65DAC5671E1A_1_1024.npy |
what is found in the thyroid lobectomy? A. follicular adenoma B. proliferative fibrocystic changes C. invasive lobular carcinoma D. non-neoplastic breast tissue | A. follicular adenoma | TCGA-AR-A5QN-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A5QN-01Z-00-DX1.BF92AA24-3D44-4FFA-BCC0-CDB934EC3BBC_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A5QN-01Z-00-DX1.BF92AA24-3D44-4FFA-BCC0-CDB934EC3BBC_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A5QN-01Z-00-DX1.BF92AA24-3D44-4FFA-BCC0-CDB934EC3BBC_1_1024.npy |
what is found in the breast at the previous biopsy site? A. invasive lobular carcinoma B. fibroadenoma C. nonproliferative fibrocystic changes D. metastatic carcinoma | A. invasive lobular carcinoma | TCGA-AR-A5QN-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A5QN-01Z-00-DX1.BF92AA24-3D44-4FFA-BCC0-CDB934EC3BBC_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A5QN-01Z-00-DX1.BF92AA24-3D44-4FFA-BCC0-CDB934EC3BBC_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A5QN-01Z-00-DX1.BF92AA24-3D44-4FFA-BCC0-CDB934EC3BBC_1_1024.npy |
what is the grade of the invasive lobular carcinoma in the breast? A. nottingham grade i B. nottingham grade ii C. nottingham grade iii D. lobular carcinoma in situ | B. nottingham grade ii | TCGA-AR-A5QN-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A5QN-01Z-00-DX1.BF92AA24-3D44-4FFA-BCC0-CDB934EC3BBC_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A5QN-01Z-00-DX1.BF92AA24-3D44-4FFA-BCC0-CDB934EC3BBC_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A5QN-01Z-00-DX1.BF92AA24-3D44-4FFA-BCC0-CDB934EC3BBC_1_1024.npy |
which areas of the breast show multiple masses? A. inferior flap and new inferior margin B. nipple and overlying skin C. axillary lymph nodes D. various locations within the breast | D. various locations within the breast | TCGA-AR-A5QN-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A5QN-01Z-00-DX1.BF92AA24-3D44-4FFA-BCC0-CDB934EC3BBC_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A5QN-01Z-00-DX1.BF92AA24-3D44-4FFA-BCC0-CDB934EC3BBC_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A5QN-01Z-00-DX1.BF92AA24-3D44-4FFA-BCC0-CDB934EC3BBC_1_1024.npy |
what is the result of surgical resection margins in relation to invasive carcinoma? A. negative B. positive C. inconclusive D. cannot be determined | A. negative | TCGA-AR-A5QN-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A5QN-01Z-00-DX1.BF92AA24-3D44-4FFA-BCC0-CDB934EC3BBC_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A5QN-01Z-00-DX1.BF92AA24-3D44-4FFA-BCC0-CDB934EC3BBC_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A5QN-01Z-00-DX1.BF92AA24-3D44-4FFA-BCC0-CDB934EC3BBC_1_1024.npy |
what type of cancer was found in the patient's breast? A. benign tumor B. infiltrating lobular carcinoma C. ductal carcinoma D. sarcoma | B. infiltrating lobular carcinoma | TCGA-A2-A1G4-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A1G4-01Z-00-DX1.0274DF5B-5920-419A-B778-2F04D9C602F2_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A1G4-01Z-00-DX1.0274DF5B-5920-419A-B778-2F04D9C602F2_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A1G4-01Z-00-DX1.0274DF5B-5920-419A-B778-2F04D9C602F2_1_1024.npy |
what were the receptor status of the tumor? A. negative B. positive for estrogen receptor and progesterone receptor C. positive for her2 D. positive for insulin receptor | B. positive for estrogen receptor and progesterone receptor | TCGA-A2-A1G4-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A1G4-01Z-00-DX1.0274DF5B-5920-419A-B778-2F04D9C602F2_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A1G4-01Z-00-DX1.0274DF5B-5920-419A-B778-2F04D9C602F2_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A1G4-01Z-00-DX1.0274DF5B-5920-419A-B778-2F04D9C602F2_1_1024.npy |
what index of the tumor was included in the slide? A. p53 index B. c-myc index C. ki67 index D. rb index | C. ki67 index | TCGA-A2-A1G4-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A1G4-01Z-00-DX1.0274DF5B-5920-419A-B778-2F04D9C602F2_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A1G4-01Z-00-DX1.0274DF5B-5920-419A-B778-2F04D9C602F2_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A1G4-01Z-00-DX1.0274DF5B-5920-419A-B778-2F04D9C602F2_1_1024.npy |
how was the patient diagnosed with breast cancer? A. modified radical mastectomy B. subareolar and nipple lymphatics involvement C. lymph node metastasis D. tumor modules in the lymph nodes | D. tumor modules in the lymph nodes | TCGA-BH-A1F8-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1F8-01Z-00-DX1.8BB026F7-35CB-483F-B665-4C3A3EF47E1B_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1F8-01Z-00-DX1.8BB026F7-35CB-483F-B665-4C3A3EF47E1B_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1F8-01Z-00-DX1.8BB026F7-35CB-483F-B665-4C3A3EF47E1B_1_1024.npy |
what is the grade of the tumor? A. grade 3 B. grade 2 C. grade 1 D. well differentiated | D. well differentiated | TCGA-BH-A1F8-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1F8-01Z-00-DX1.8BB026F7-35CB-483F-B665-4C3A3EF47E1B_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1F8-01Z-00-DX1.8BB026F7-35CB-483F-B665-4C3A3EF47E1B_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1F8-01Z-00-DX1.8BB026F7-35CB-483F-B665-4C3A3EF47E1B_1_1024.npy |
what procedure was performed on the patient? A. procurement of the left axilla B. modified radical mastectomy C. subareolar and nipple lymphatics involvement D. tumor modules in the lymph nodes | D. tumor modules in the lymph nodes | TCGA-BH-A1F8-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1F8-01Z-00-DX1.8BB026F7-35CB-483F-B665-4C3A3EF47E1B_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1F8-01Z-00-DX1.8BB026F7-35CB-483F-B665-4C3A3EF47E1B_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1F8-01Z-00-DX1.8BB026F7-35CB-483F-B665-4C3A3EF47E1B_1_1024.npy |
what is the differentiation status of the tumor? A. poorly differentiated B. well differentiated C. moderately differentiated D. tumor modules in the lymph nodes | D. tumor modules in the lymph nodes | TCGA-BH-A1F8-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1F8-01Z-00-DX1.8BB026F7-35CB-483F-B665-4C3A3EF47E1B_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1F8-01Z-00-DX1.8BB026F7-35CB-483F-B665-4C3A3EF47E1B_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1F8-01Z-00-DX1.8BB026F7-35CB-483F-B665-4C3A3EF47E1B_1_1024.npy |
what type of breast cancer did the patient have? A. invasive lobular carcinoma B. invasive ductal carcinoma C. ductal carcinoma in situ D. metastatic carcinoma | B. invasive ductal carcinoma | TCGA-A7-A4SE-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A7-A4SE-01Z-00-DX1.16BC8401-E40E-4A1A-9BD9-12735C9AE3F6_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A7-A4SE-01Z-00-DX1.16BC8401-E40E-4A1A-9BD9-12735C9AE3F6_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A7-A4SE-01Z-00-DX1.16BC8401-E40E-4A1A-9BD9-12735C9AE3F6_1_1024.npy |
what was the grade of the cancer? A. grade 1 B. grade 2 C. grade 3 D. grade 4 | C. grade 3 | TCGA-A7-A4SE-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A7-A4SE-01Z-00-DX1.16BC8401-E40E-4A1A-9BD9-12735C9AE3F6_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A7-A4SE-01Z-00-DX1.16BC8401-E40E-4A1A-9BD9-12735C9AE3F6_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A7-A4SE-01Z-00-DX1.16BC8401-E40E-4A1A-9BD9-12735C9AE3F6_1_1024.npy |
were the margins of excision positive or negative? A. positive B. negative C. inconclusive D. unclear | B. negative | TCGA-A7-A4SE-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A7-A4SE-01Z-00-DX1.16BC8401-E40E-4A1A-9BD9-12735C9AE3F6_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A7-A4SE-01Z-00-DX1.16BC8401-E40E-4A1A-9BD9-12735C9AE3F6_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A7-A4SE-01Z-00-DX1.16BC8401-E40E-4A1A-9BD9-12735C9AE3F6_1_1024.npy |
was vessel invasion identified in the tumor? A. yes, vessel invasion was identified B. no, vessel invasion was not identified C. inconclusive D. unclear | B. no, vessel invasion was not identified | TCGA-A7-A4SE-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A7-A4SE-01Z-00-DX1.16BC8401-E40E-4A1A-9BD9-12735C9AE3F6_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A7-A4SE-01Z-00-DX1.16BC8401-E40E-4A1A-9BD9-12735C9AE3F6_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A7-A4SE-01Z-00-DX1.16BC8401-E40E-4A1A-9BD9-12735C9AE3F6_1_1024.npy |
what type of breast cancer has the patient been diagnosed with? A. paget's disease B. ductal carcinoma in situ C. infiltrative ductal carcinoma D. lobular carcinoma | C. infiltrative ductal carcinoma | TCGA-AN-A0XO-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AN-A0XO-01Z-00-DX1.204E554E-B1A8-41AD-8E39-62484DF4E3CD_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AN-A0XO-01Z-00-DX1.204E554E-B1A8-41AD-8E39-62484DF4E3CD_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AN-A0XO-01Z-00-DX1.204E554E-B1A8-41AD-8E39-62484DF4E3CD_1_1024.npy |
what is the grade of the tumor? A. grade 1 B. grade 2 C. grade 3 D. grade 4 | B. grade 2 | TCGA-AN-A0XO-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AN-A0XO-01Z-00-DX1.204E554E-B1A8-41AD-8E39-62484DF4E3CD_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AN-A0XO-01Z-00-DX1.204E554E-B1A8-41AD-8E39-62484DF4E3CD_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AN-A0XO-01Z-00-DX1.204E554E-B1A8-41AD-8E39-62484DF4E3CD_1_1024.npy |
what is the t stage of the tumor? A. t stage 0 B. t stage 1 C. t stage 2 D. t stage 3 | C. t stage 2 | TCGA-AN-A0XO-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AN-A0XO-01Z-00-DX1.204E554E-B1A8-41AD-8E39-62484DF4E3CD_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AN-A0XO-01Z-00-DX1.204E554E-B1A8-41AD-8E39-62484DF4E3CD_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AN-A0XO-01Z-00-DX1.204E554E-B1A8-41AD-8E39-62484DF4E3CD_1_1024.npy |
what is the n stage of the tumor? A. n stage 0 B. n stage 1 C. n stage 2 D. n stage 3 | B. n stage 1 | TCGA-AN-A0XO-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AN-A0XO-01Z-00-DX1.204E554E-B1A8-41AD-8E39-62484DF4E3CD_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AN-A0XO-01Z-00-DX1.204E554E-B1A8-41AD-8E39-62484DF4E3CD_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AN-A0XO-01Z-00-DX1.204E554E-B1A8-41AD-8E39-62484DF4E3CD_1_1024.npy |
what is the m stage of the tumor? A. m stage 0 B. m stage 1 C. m stage 2 D. m stage 3 | A. m stage 0 | TCGA-AN-A0XO-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AN-A0XO-01Z-00-DX1.204E554E-B1A8-41AD-8E39-62484DF4E3CD_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AN-A0XO-01Z-00-DX1.204E554E-B1A8-41AD-8E39-62484DF4E3CD_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AN-A0XO-01Z-00-DX1.204E554E-B1A8-41AD-8E39-62484DF4E3CD_1_1024.npy |
has the patient received any treatment? A. yes B. no C. unknown D. not mentioned | B. no | TCGA-AN-A0XO-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AN-A0XO-01Z-00-DX1.204E554E-B1A8-41AD-8E39-62484DF4E3CD_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AN-A0XO-01Z-00-DX1.204E554E-B1A8-41AD-8E39-62484DF4E3CD_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AN-A0XO-01Z-00-DX1.204E554E-B1A8-41AD-8E39-62484DF4E3CD_1_1024.npy |
which type of carcinoma was found in the patient's breast? A. invasive ductal carcinoma B. invasive lobular carcinoma C. ductal carcinoma in situ D. papillary carcinoma | A. invasive ductal carcinoma | TCGA-GM-A2DH-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-GM-A2DH-01Z-00-DX1.5790F15F-2A0F-4929-8FE4-18A557007989_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-GM-A2DH-01Z-00-DX1.5790F15F-2A0F-4929-8FE4-18A557007989_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-GM-A2DH-01Z-00-DX1.5790F15F-2A0F-4929-8FE4-18A557007989_1_1024.npy |
what grade was given to the histologic assessment of the tumor? A. grade 1 B. grade 2 C. grade 3 D. grade 4 | C. grade 3 | TCGA-GM-A2DH-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-GM-A2DH-01Z-00-DX1.5790F15F-2A0F-4929-8FE4-18A557007989_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-GM-A2DH-01Z-00-DX1.5790F15F-2A0F-4929-8FE4-18A557007989_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-GM-A2DH-01Z-00-DX1.5790F15F-2A0F-4929-8FE4-18A557007989_1_1024.npy |
what additional testing is required to assess hormone receptor status and her2 gene copy level? A. blood test B. bone scan C. pet scan D. further testing | D. further testing | TCGA-GM-A2DH-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-GM-A2DH-01Z-00-DX1.5790F15F-2A0F-4929-8FE4-18A557007989_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-GM-A2DH-01Z-00-DX1.5790F15F-2A0F-4929-8FE4-18A557007989_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-GM-A2DH-01Z-00-DX1.5790F15F-2A0F-4929-8FE4-18A557007989_1_1024.npy |
what other conditions were present alongside the invasive ductal carcinoma? A. lymphocytic infiltrate B. adjacent columnar cell hyperplasia and calcifications C. dcis D. intralymphatic tumor | B. adjacent columnar cell hyperplasia and calcifications | TCGA-GM-A2DH-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-GM-A2DH-01Z-00-DX1.5790F15F-2A0F-4929-8FE4-18A557007989_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-GM-A2DH-01Z-00-DX1.5790F15F-2A0F-4929-8FE4-18A557007989_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-GM-A2DH-01Z-00-DX1.5790F15F-2A0F-4929-8FE4-18A557007989_1_1024.npy |
what was the grade of the breast tumor? A. grade i B. grade ii C. grade iii D. grade iv | C. grade iii | TCGA-HN-A2NL-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-HN-A2NL-01Z-00-DX1.C2EAF378-4B37-4C1C-BB0F-18FAC62EEC13_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-HN-A2NL-01Z-00-DX1.C2EAF378-4B37-4C1C-BB0F-18FAC62EEC13_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-HN-A2NL-01Z-00-DX1.C2EAF378-4B37-4C1C-BB0F-18FAC62EEC13_1_1024.npy |
what were the er, pr, and her2 statuses of the tumor? A. er+, pr+, her2- B. er-, pr+, her2+ C. er+, pr-, her2+ D. er-, pr-, her2- | D. er-, pr-, her2- | TCGA-HN-A2NL-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-HN-A2NL-01Z-00-DX1.C2EAF378-4B37-4C1C-BB0F-18FAC62EEC13_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-HN-A2NL-01Z-00-DX1.C2EAF378-4B37-4C1C-BB0F-18FAC62EEC13_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-HN-A2NL-01Z-00-DX1.C2EAF378-4B37-4C1C-BB0F-18FAC62EEC13_1_1024.npy |
was in situ carcinoma found in the tumor? A. yes B. no C. not mentioned D. cannot be determined | B. no | TCGA-HN-A2NL-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-HN-A2NL-01Z-00-DX1.C2EAF378-4B37-4C1C-BB0F-18FAC62EEC13_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-HN-A2NL-01Z-00-DX1.C2EAF378-4B37-4C1C-BB0F-18FAC62EEC13_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-HN-A2NL-01Z-00-DX1.C2EAF378-4B37-4C1C-BB0F-18FAC62EEC13_1_1024.npy |
which breast was affected by the tumor? A. right breast B. left breast C. both breasts D. cannot be determined | B. left breast | TCGA-HN-A2NL-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-HN-A2NL-01Z-00-DX1.C2EAF378-4B37-4C1C-BB0F-18FAC62EEC13_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-HN-A2NL-01Z-00-DX1.C2EAF378-4B37-4C1C-BB0F-18FAC62EEC13_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-HN-A2NL-01Z-00-DX1.C2EAF378-4B37-4C1C-BB0F-18FAC62EEC13_1_1024.npy |
how many other masses were identified in the specimen? A. none. B. one. C. two. D. not mentioned. | A. none. | TCGA-AC-A2B8-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AC-A2B8-01Z-00-DX1.14F3A9B2-1382-436A-B53C-92FC8495AD48_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AC-A2B8-01Z-00-DX1.14F3A9B2-1382-436A-B53C-92FC8495AD48_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AC-A2B8-01Z-00-DX1.14F3A9B2-1382-436A-B53C-92FC8495AD48_1_1024.npy |
what were the findings of the microscopic examination of the sentinel node? A. malignant cells. B. benign cells. C. inconclusive. D. not mentioned. | B. benign cells. | TCGA-AC-A2B8-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AC-A2B8-01Z-00-DX1.14F3A9B2-1382-436A-B53C-92FC8495AD48_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AC-A2B8-01Z-00-DX1.14F3A9B2-1382-436A-B53C-92FC8495AD48_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AC-A2B8-01Z-00-DX1.14F3A9B2-1382-436A-B53C-92FC8495AD48_1_1024.npy |
what was the final breast tumor classification? A. t2pno (+) mx. B. t4pno (+) mx. C. t3pno (+) mx. D. not mentioned. | C. t3pno (+) mx. | TCGA-AC-A2B8-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AC-A2B8-01Z-00-DX1.14F3A9B2-1382-436A-B53C-92FC8495AD48_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AC-A2B8-01Z-00-DX1.14F3A9B2-1382-436A-B53C-92FC8495AD48_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AC-A2B8-01Z-00-DX1.14F3A9B2-1382-436A-B53C-92FC8495AD48_1_1024.npy |
was there lymphovascular and perineural invasion present in the breast tissue? A. yes, there was B. no, there was not C. the slide did not indicate D. the slide is inconclusive | A. yes, there was | TCGA-S3-A6ZG-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-S3-A6ZG-01Z-00-DX1.659A0BFB-D99B-474F-B4C2-6590C9161BD1_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-S3-A6ZG-01Z-00-DX1.659A0BFB-D99B-474F-B4C2-6590C9161BD1_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-S3-A6ZG-01Z-00-DX1.659A0BFB-D99B-474F-B4C2-6590C9161BD1_1_1024.npy |
what grades of carcinoma were present in the breast tissue? A. grade 1 B. grade 2 C. grade 3 D. grade 4 | B. grade 2 | TCGA-S3-A6ZG-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-S3-A6ZG-01Z-00-DX1.659A0BFB-D99B-474F-B4C2-6590C9161BD1_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-S3-A6ZG-01Z-00-DX1.659A0BFB-D99B-474F-B4C2-6590C9161BD1_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-S3-A6ZG-01Z-00-DX1.659A0BFB-D99B-474F-B4C2-6590C9161BD1_1_1024.npy |
what types of carcinoma were present in the breast tissue? A. mixed ductal and lobular carcinoma B. invasive ductal carcinoma C. invasive lobular carcinoma D. the slide did not indicate | A. mixed ductal and lobular carcinoma | TCGA-S3-A6ZG-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-S3-A6ZG-01Z-00-DX1.659A0BFB-D99B-474F-B4C2-6590C9161BD1_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-S3-A6ZG-01Z-00-DX1.659A0BFB-D99B-474F-B4C2-6590C9161BD1_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-S3-A6ZG-01Z-00-DX1.659A0BFB-D99B-474F-B4C2-6590C9161BD1_1_1024.npy |
what additional findings were present in the breast tissue besides carcinoma? A. nodal involvement B. atypical ductal hyperplasia C. atypical lobular hyperplasia D. the slide did not indicate | C. atypical lobular hyperplasia | TCGA-S3-A6ZG-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-S3-A6ZG-01Z-00-DX1.659A0BFB-D99B-474F-B4C2-6590C9161BD1_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-S3-A6ZG-01Z-00-DX1.659A0BFB-D99B-474F-B4C2-6590C9161BD1_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-S3-A6ZG-01Z-00-DX1.659A0BFB-D99B-474F-B4C2-6590C9161BD1_1_1024.npy |
what is the subtype of invasive ductal carcinoma in the breast? A. solid and cribriform B. squamous and papillary C. lobular and mucinous D. inflammatory and medullary | A. solid and cribriform | TCGA-BH-A0BJ-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0BJ-01Z-00-DX1.77BE9A20-3D23-4650-843A-0483BF9DD07B_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0BJ-01Z-00-DX1.77BE9A20-3D23-4650-843A-0483BF9DD07B_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0BJ-01Z-00-DX1.77BE9A20-3D23-4650-843A-0483BF9DD07B_1_1024.npy |
what is the hormone receptor status of the tumor? A. estrogen receptor positive and progesterone receptor negative B. estrogen receptor negative and progesterone receptor positive C. estrogen receptor negative and progesterone receptor negative D. estrogen receptor positive and progesterone receptor positive | D. estrogen receptor positive and progesterone receptor positive | TCGA-BH-A0BJ-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0BJ-01Z-00-DX1.77BE9A20-3D23-4650-843A-0483BF9DD07B_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0BJ-01Z-00-DX1.77BE9A20-3D23-4650-843A-0483BF9DD07B_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0BJ-01Z-00-DX1.77BE9A20-3D23-4650-843A-0483BF9DD07B_1_1024.npy |
what is the her2 status of the tumor? A. her2 positive B. her2 negative C. her2 equivocal D. her2 amplification not determined | B. her2 negative | TCGA-BH-A0BJ-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0BJ-01Z-00-DX1.77BE9A20-3D23-4650-843A-0483BF9DD07B_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0BJ-01Z-00-DX1.77BE9A20-3D23-4650-843A-0483BF9DD07B_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0BJ-01Z-00-DX1.77BE9A20-3D23-4650-843A-0483BF9DD07B_1_1024.npy |
what is the status of the resection margins? A. tumor involvement at the margins B. clear margins C. unclear margins D. involvement of deep margins only | B. clear margins | TCGA-BH-A0BJ-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0BJ-01Z-00-DX1.77BE9A20-3D23-4650-843A-0483BF9DD07B_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0BJ-01Z-00-DX1.77BE9A20-3D23-4650-843A-0483BF9DD07B_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0BJ-01Z-00-DX1.77BE9A20-3D23-4650-843A-0483BF9DD07B_1_1024.npy |
in which breast was the papillary carcinoma found? A. right breast B. left breast C. both breasts D. no evidence of malignancy. | B. left breast | TCGA-A2-A0CQ-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A0CQ-01Z-00-DX1.4E5FB4E5-A08C-4C87-A3BE-0640A95AE649_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A0CQ-01Z-00-DX1.4E5FB4E5-A08C-4C87-A3BE-0640A95AE649_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A0CQ-01Z-00-DX1.4E5FB4E5-A08C-4C87-A3BE-0640A95AE649_1_1024.npy |
which type of carcinoma is present in the breast lumpectomy? A. papillary carcinoma B. ductal carcinoma C. infiltrating ductal adenocarcinoma D. lobular carcinoma in-situ | A. papillary carcinoma | TCGA-A2-A0CQ-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A0CQ-01Z-00-DX1.4E5FB4E5-A08C-4C87-A3BE-0640A95AE649_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A0CQ-01Z-00-DX1.4E5FB4E5-A08C-4C87-A3BE-0640A95AE649_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A0CQ-01Z-00-DX1.4E5FB4E5-A08C-4C87-A3BE-0640A95AE649_1_1024.npy |
what is the ajcc stage of the carcinoma? A. pt1 pno(i-) mx B. pt2 pno(i-) mx C. pt3 pno(i-) mx D. not mentioned. | A. pt1 pno(i-) mx | TCGA-A2-A0CQ-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A0CQ-01Z-00-DX1.4E5FB4E5-A08C-4C87-A3BE-0640A95AE649_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A0CQ-01Z-00-DX1.4E5FB4E5-A08C-4C87-A3BE-0640A95AE649_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A0CQ-01Z-00-DX1.4E5FB4E5-A08C-4C87-A3BE-0640A95AE649_1_1024.npy |
is invasive carcinoma present in the final superior margin excision? A. yes, it is. B. no, it isn't. C. in both breast lumpectomies. D. not mentioned. | B. no, it isn't. | TCGA-A2-A0CQ-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A0CQ-01Z-00-DX1.4E5FB4E5-A08C-4C87-A3BE-0640A95AE649_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A0CQ-01Z-00-DX1.4E5FB4E5-A08C-4C87-A3BE-0640A95AE649_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A0CQ-01Z-00-DX1.4E5FB4E5-A08C-4C87-A3BE-0640A95AE649_1_1024.npy |
what was the main reason for the surgery? A. invasive ductal carcinoma B. metastatic carcinoma C. ductal carcinoma in situ D. her2/neu status | A. invasive ductal carcinoma | TCGA-AR-A0TZ-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A0TZ-01Z-00-DX1.2D58BE38-03F6-4310-8E06-F1A523FB0904_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A0TZ-01Z-00-DX1.2D58BE38-03F6-4310-8E06-F1A523FB0904_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A0TZ-01Z-00-DX1.2D58BE38-03F6-4310-8E06-F1A523FB0904_1_1024.npy |
where was the largest mass found? A. upper inner quadrant B. upper outer quadrant C. lower inner quadrant D. lower outer quadrant | B. upper outer quadrant | TCGA-AR-A0TZ-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A0TZ-01Z-00-DX1.2D58BE38-03F6-4310-8E06-F1A523FB0904_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A0TZ-01Z-00-DX1.2D58BE38-03F6-4310-8E06-F1A523FB0904_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A0TZ-01Z-00-DX1.2D58BE38-03F6-4310-8E06-F1A523FB0904_1_1024.npy |
what is the grade of the tumor? A. nottingham grade i B. nottingham grade ii C. nottingham grade iii D. nottingham grade iv | B. nottingham grade ii | TCGA-AR-A0TZ-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A0TZ-01Z-00-DX1.2D58BE38-03F6-4310-8E06-F1A523FB0904_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A0TZ-01Z-00-DX1.2D58BE38-03F6-4310-8E06-F1A523FB0904_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A0TZ-01Z-00-DX1.2D58BE38-03F6-4310-8E06-F1A523FB0904_1_1024.npy |
what part of the breast is free of neoplasm? A. skin B. nipple C. deep margin D. all of the above | D. all of the above | TCGA-AR-A0TZ-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A0TZ-01Z-00-DX1.2D58BE38-03F6-4310-8E06-F1A523FB0904_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A0TZ-01Z-00-DX1.2D58BE38-03F6-4310-8E06-F1A523FB0904_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A0TZ-01Z-00-DX1.2D58BE38-03F6-4310-8E06-F1A523FB0904_1_1024.npy |
what type of cancer did the patient have in their breast? A. ductal carcinoma B. inflammatory breast cancer C. lobular carcinoma D. sarcoma | A. ductal carcinoma | TCGA-A2-A3XX-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XX-01Z-00-DX1.03C6D70F-2833-4E97-91B7-DE70CD083D92_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XX-01Z-00-DX1.03C6D70F-2833-4E97-91B7-DE70CD083D92_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XX-01Z-00-DX1.03C6D70F-2833-4E97-91B7-DE70CD083D92_1_1024.npy |
what was the grade of the infiltrating ductal carcinoma? A. grade 1 out of 3. B. grade 2 out of 3. C. grade 3 out of 3. D. no grade was given. | C. grade 3 out of 3. | TCGA-A2-A3XX-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XX-01Z-00-DX1.03C6D70F-2833-4E97-91B7-DE70CD083D92_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XX-01Z-00-DX1.03C6D70F-2833-4E97-91B7-DE70CD083D92_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XX-01Z-00-DX1.03C6D70F-2833-4E97-91B7-DE70CD083D92_1_1024.npy |
what was the receptor status of the tumor? A. positive for estrogen receptors and her2. B. negative for estrogen receptors and positive for her2. C. negative for estrogen receptors, negative for progesterone receptors, and negative for her2. D. positive for estrogen receptors, negative for progesterone receptors, and negative for her2. | C. negative for estrogen receptors, negative for progesterone receptors, and negative for her2. | TCGA-A2-A3XX-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XX-01Z-00-DX1.03C6D70F-2833-4E97-91B7-DE70CD083D92_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XX-01Z-00-DX1.03C6D70F-2833-4E97-91B7-DE70CD083D92_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XX-01Z-00-DX1.03C6D70F-2833-4E97-91B7-DE70CD083D92_1_1024.npy |
what was the pathologic stage of the cancer? A. pt1 no(i-) mx. B. pt2 no(i-) mx. C. pt3 no(i-) mx. D. pt4 no(i-) mx. | B. pt2 no(i-) mx. | TCGA-A2-A3XX-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XX-01Z-00-DX1.03C6D70F-2833-4E97-91B7-DE70CD083D92_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XX-01Z-00-DX1.03C6D70F-2833-4E97-91B7-DE70CD083D92_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XX-01Z-00-DX1.03C6D70F-2833-4E97-91B7-DE70CD083D92_1_1024.npy |
which regions had positive margins? A. superior and posterior B. inferior and anterior C. medial and posterior D. lateral and inferior | B. inferior and anterior | TCGA-A2-A3XT-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XT-01Z-00-DX1.336D6C78-576A-481B-8C83-F3A0FC4B182C_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XT-01Z-00-DX1.336D6C78-576A-481B-8C83-F3A0FC4B182C_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XT-01Z-00-DX1.336D6C78-576A-481B-8C83-F3A0FC4B182C_1_1024.npy |
what was the grade of the adenocarcinoma found in the patient's breast? A. well differentiated B. moderately differentiated C. poorly differentiated D. undifferentiated | C. poorly differentiated | TCGA-A2-A3XT-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XT-01Z-00-DX1.336D6C78-576A-481B-8C83-F3A0FC4B182C_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XT-01Z-00-DX1.336D6C78-576A-481B-8C83-F3A0FC4B182C_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XT-01Z-00-DX1.336D6C78-576A-481B-8C83-F3A0FC4B182C_1_1024.npy |
what was the result of the her2 immunohistochemistry testing? A. positive B. negative C. inconclusive D. not mentioned | B. negative | TCGA-A2-A3XT-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XT-01Z-00-DX1.336D6C78-576A-481B-8C83-F3A0FC4B182C_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XT-01Z-00-DX1.336D6C78-576A-481B-8C83-F3A0FC4B182C_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XT-01Z-00-DX1.336D6C78-576A-481B-8C83-F3A0FC4B182C_1_1024.npy |
was an intraductal component identified? A. yes B. no C. inconclusive D. not mentioned | B. no | TCGA-A2-A3XT-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XT-01Z-00-DX1.336D6C78-576A-481B-8C83-F3A0FC4B182C_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XT-01Z-00-DX1.336D6C78-576A-481B-8C83-F3A0FC4B182C_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XT-01Z-00-DX1.336D6C78-576A-481B-8C83-F3A0FC4B182C_1_1024.npy |
what was the instruction given in the slide about the breast primary origin? A. further stains were not needed B. further stains were needed C. primary origin was certain D. primary origin was inconclusive | B. further stains were needed | TCGA-A2-A3XT-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XT-01Z-00-DX1.336D6C78-576A-481B-8C83-F3A0FC4B182C_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XT-01Z-00-DX1.336D6C78-576A-481B-8C83-F3A0FC4B182C_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A3XT-01Z-00-DX1.336D6C78-576A-481B-8C83-F3A0FC4B182C_1_1024.npy |
what was the type of breast cancer that the patient had? A. sarcoma B. inflammatory carcinoma C. infiltrating ductal carcinoma D. lobular carcinoma | C. infiltrating ductal carcinoma | TCGA-A2-A04Q-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A04Q-01Z-00-DX1.DF7ED6B6-7701-486D-9007-F26B6F0682C4_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A04Q-01Z-00-DX1.DF7ED6B6-7701-486D-9007-F26B6F0682C4_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A04Q-01Z-00-DX1.DF7ED6B6-7701-486D-9007-F26B6F0682C4_1_1024.npy |
was the her2 neu amplified by fish? A. yes B. no C. insufficient data D. not mentioned in the slide | B. no | TCGA-A2-A04Q-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A04Q-01Z-00-DX1.DF7ED6B6-7701-486D-9007-F26B6F0682C4_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A04Q-01Z-00-DX1.DF7ED6B6-7701-486D-9007-F26B6F0682C4_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A04Q-01Z-00-DX1.DF7ED6B6-7701-486D-9007-F26B6F0682C4_1_1024.npy |
were there any residual paget's disease or involvement of lactiferous ducts? A. yes, there was residual paget's disease B. yes, there was involvement of lactiferous ducts C. no, there were neither residual paget's disease nor involvement of lactiferous ducts D. insufficient data | C. no, there were neither residual paget's disease nor involvement of lactiferous ducts | TCGA-A2-A04Q-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A04Q-01Z-00-DX1.DF7ED6B6-7701-486D-9007-F26B6F0682C4_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A04Q-01Z-00-DX1.DF7ED6B6-7701-486D-9007-F26B6F0682C4_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A04Q-01Z-00-DX1.DF7ED6B6-7701-486D-9007-F26B6F0682C4_1_1024.npy |
were the progesterone receptors positive or negative in both the infiltrating and in situ carcinoma? A. positive B. negative C. insufficient data D. not mentioned in the slide | B. negative | TCGA-A2-A04Q-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A04Q-01Z-00-DX1.DF7ED6B6-7701-486D-9007-F26B6F0682C4_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A04Q-01Z-00-DX1.DF7ED6B6-7701-486D-9007-F26B6F0682C4_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A2-A04Q-01Z-00-DX1.DF7ED6B6-7701-486D-9007-F26B6F0682C4_1_1024.npy |
what other pathological findings were seen in the excised breast samples? A. atypical lobular hyperplasia B. metastatic carcinoma C. extranodal extension D. columnar cell change | D. columnar cell change | TCGA-GM-A2DC-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-GM-A2DC-01Z-00-DX1.39F956BB-52D0-4385-9923-4D7D36D78862_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-GM-A2DC-01Z-00-DX1.39F956BB-52D0-4385-9923-4D7D36D78862_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-GM-A2DC-01Z-00-DX1.39F956BB-52D0-4385-9923-4D7D36D78862_1_1024.npy |
what is the histologic grade of the invasive ductal carcinoma? A. grade 1 B. intermediate grade C. grade 2 D. grade 3 | D. grade 3 | TCGA-GM-A2DC-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-GM-A2DC-01Z-00-DX1.39F956BB-52D0-4385-9923-4D7D36D78862_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-GM-A2DC-01Z-00-DX1.39F956BB-52D0-4385-9923-4D7D36D78862_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-GM-A2DC-01Z-00-DX1.39F956BB-52D0-4385-9923-4D7D36D78862_1_1024.npy |
what is the grade of the infiltrating ductal carcinoma? A. grade 1 B. grade 2 C. grade 3 D. grade 4 | C. grade 3 | TCGA-BH-A0B3-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0B3-01Z-00-DX1.90CB0ED5-FBB7-4ABF-93A0-DD88D60D3D55_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0B3-01Z-00-DX1.90CB0ED5-FBB7-4ABF-93A0-DD88D60D3D55_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0B3-01Z-00-DX1.90CB0ED5-FBB7-4ABF-93A0-DD88D60D3D55_1_1024.npy |
was lymphovascular invasion identified? A. yes B. no C. not mentioned D. unclear | B. no | TCGA-BH-A0B3-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0B3-01Z-00-DX1.90CB0ED5-FBB7-4ABF-93A0-DD88D60D3D55_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0B3-01Z-00-DX1.90CB0ED5-FBB7-4ABF-93A0-DD88D60D3D55_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0B3-01Z-00-DX1.90CB0ED5-FBB7-4ABF-93A0-DD88D60D3D55_1_1024.npy |
what is present in the nonneoplastic breast tissue? A. fibroadenoma B. fibrocystic changes C. intraductal papilloma D. granular cell tumor | B. fibrocystic changes | TCGA-BH-A0B3-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0B3-01Z-00-DX1.90CB0ED5-FBB7-4ABF-93A0-DD88D60D3D55_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0B3-01Z-00-DX1.90CB0ED5-FBB7-4ABF-93A0-DD88D60D3D55_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0B3-01Z-00-DX1.90CB0ED5-FBB7-4ABF-93A0-DD88D60D3D55_1_1024.npy |
what are the receptors negative in the invasive tumor? A. estrogen and progesterone B. progesterone and her-2/neu C. estrogen and her-2/neu D. her-2/neu and prolactin | A. estrogen and progesterone | TCGA-BH-A0B3-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0B3-01Z-00-DX1.90CB0ED5-FBB7-4ABF-93A0-DD88D60D3D55_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0B3-01Z-00-DX1.90CB0ED5-FBB7-4ABF-93A0-DD88D60D3D55_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0B3-01Z-00-DX1.90CB0ED5-FBB7-4ABF-93A0-DD88D60D3D55_1_1024.npy |
what was the surgical procedure performed on the patient? A. lumpectomy B. mastectomy C. biopsy D. radiation therapy | B. mastectomy | TCGA-BH-A1FN-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FN-01Z-00-DX1.CEE3C59B-6CF0-4D41-8334-6067BB5A8BF7_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FN-01Z-00-DX1.CEE3C59B-6CF0-4D41-8334-6067BB5A8BF7_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FN-01Z-00-DX1.CEE3C59B-6CF0-4D41-8334-6067BB5A8BF7_1_1024.npy |
where were tissue samples taken from during the surgical procedure? A. left breast and axilla B. right breast and axilla C. left breast only D. right breast only | B. right breast and axilla | TCGA-BH-A1FN-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FN-01Z-00-DX1.CEE3C59B-6CF0-4D41-8334-6067BB5A8BF7_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FN-01Z-00-DX1.CEE3C59B-6CF0-4D41-8334-6067BB5A8BF7_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FN-01Z-00-DX1.CEE3C59B-6CF0-4D41-8334-6067BB5A8BF7_1_1024.npy |
what is the diagnosis stated in the pathological slide? A. infiltrating lobular carcinoma B. ductal carcinoma in situ C. metastatic breast cancer D. infiltrating ductal carcinoma | D. infiltrating ductal carcinoma | TCGA-BH-A1FN-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FN-01Z-00-DX1.CEE3C59B-6CF0-4D41-8334-6067BB5A8BF7_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FN-01Z-00-DX1.CEE3C59B-6CF0-4D41-8334-6067BB5A8BF7_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FN-01Z-00-DX1.CEE3C59B-6CF0-4D41-8334-6067BB5A8BF7_1_1024.npy |
what is the status of the margins mentioned in the slide? A. involved margins B. unclear margins C. grossly free margins D. close margins | C. grossly free margins | TCGA-BH-A1FN-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FN-01Z-00-DX1.CEE3C59B-6CF0-4D41-8334-6067BB5A8BF7_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FN-01Z-00-DX1.CEE3C59B-6CF0-4D41-8334-6067BB5A8BF7_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FN-01Z-00-DX1.CEE3C59B-6CF0-4D41-8334-6067BB5A8BF7_1_1024.npy |
what is the final diagnosis of the patient's condition? A. triple-negative breast cancer B. lobular carcinoma in situ C. invasive lobular carcinoma D. intermediate grade invasive ductal carcinoma | D. intermediate grade invasive ductal carcinoma | TCGA-BH-A1FN-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FN-01Z-00-DX1.CEE3C59B-6CF0-4D41-8334-6067BB5A8BF7_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FN-01Z-00-DX1.CEE3C59B-6CF0-4D41-8334-6067BB5A8BF7_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FN-01Z-00-DX1.CEE3C59B-6CF0-4D41-8334-6067BB5A8BF7_1_1024.npy |
what is the nottingham grade for the tumor? A. 5/9 B. 3/9 C. 6/9 D. 2/9 | A. 5/9 | TCGA-BH-A0B0-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0B0-01Z-00-DX1.316D35DB-7F13-4AE5-82A7-5716D2519669_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0B0-01Z-00-DX1.316D35DB-7F13-4AE5-82A7-5716D2519669_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0B0-01Z-00-DX1.316D35DB-7F13-4AE5-82A7-5716D2519669_1_1024.npy |
what is the tumor type? A. ductal adenocarcinoma B. lobular carcinoma C. squamous cell carcinoma D. fibroadenoma | A. ductal adenocarcinoma | TCGA-BH-A0B0-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0B0-01Z-00-DX1.316D35DB-7F13-4AE5-82A7-5716D2519669_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0B0-01Z-00-DX1.316D35DB-7F13-4AE5-82A7-5716D2519669_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0B0-01Z-00-DX1.316D35DB-7F13-4AE5-82A7-5716D2519669_1_1024.npy |
are the surgical margins involved by the invasive component? A. yes B. no C. not mentioned D. partially | B. no | TCGA-BH-A0B0-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0B0-01Z-00-DX1.316D35DB-7F13-4AE5-82A7-5716D2519669_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0B0-01Z-00-DX1.316D35DB-7F13-4AE5-82A7-5716D2519669_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0B0-01Z-00-DX1.316D35DB-7F13-4AE5-82A7-5716D2519669_1_1024.npy |
what was the nottingham grade of the infiltrating lobular carcinoma? A. grade i B. grade ii C. grade iii D. grade iv | A. grade i | TCGA-AR-A1AL-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A1AL-01Z-00-DX1.0970370F-6D4B-449A-AF33-76355DD99F91_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A1AL-01Z-00-DX1.0970370F-6D4B-449A-AF33-76355DD99F91_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A1AL-01Z-00-DX1.0970370F-6D4B-449A-AF33-76355DD99F91_1_1024.npy |
were the surgical margins positive or negative for tumor? A. positive B. negative C. not mentioned D. inconclusive | B. negative | TCGA-AR-A1AL-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A1AL-01Z-00-DX1.0970370F-6D4B-449A-AF33-76355DD99F91_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A1AL-01Z-00-DX1.0970370F-6D4B-449A-AF33-76355DD99F91_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-AR-A1AL-01Z-00-DX1.0970370F-6D4B-449A-AF33-76355DD99F91_1_1024.npy |
what is the histological grade of the invasive ductal carcinoma? A. nhg1 B. nhg2 C. nhg3 D. nhg4 | C. nhg3 | TCGA-D8-A1JJ-01Z-00-DX2 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-D8-A1JJ-01Z-00-DX2.7D20F308-7DC6-4367-9459-3AC4C654E7F7_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-D8-A1JJ-01Z-00-DX2.7D20F308-7DC6-4367-9459-3AC4C654E7F7_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-D8-A1JJ-01Z-00-DX2.7D20F308-7DC6-4367-9459-3AC4C654E7F7_1_1024.npy |