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what is the malignancy grade of the carcinoma? A. m0 B. m1 C. m2 D. m3 | B. m1 | TCGA-A8-A06X-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A8-A06X-01Z-00-DX1.21F19EDD-ABCB-4398-B210-D795BB7A34E3_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A8-A06X-01Z-00-DX1.21F19EDD-ABCB-4398-B210-D795BB7A34E3_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A8-A06X-01Z-00-DX1.21F19EDD-ABCB-4398-B210-D795BB7A34E3_1_1024.npy |
is there evidence of angioinvasion in the tumor? A. yes B. no C. not mentioned D. cannot be determined | A. yes | TCGA-A8-A06X-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A8-A06X-01Z-00-DX1.21F19EDD-ABCB-4398-B210-D795BB7A34E3_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A8-A06X-01Z-00-DX1.21F19EDD-ABCB-4398-B210-D795BB7A34E3_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A8-A06X-01Z-00-DX1.21F19EDD-ABCB-4398-B210-D795BB7A34E3_1_1024.npy |
what is the tumor classification? A. g1 (lo, vo) B. g2 (lo, vo) C. g3 (lo, vo) D. g4 (lo, vo) | C. g3 (lo, vo) | TCGA-A8-A06X-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A8-A06X-01Z-00-DX1.21F19EDD-ABCB-4398-B210-D795BB7A34E3_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A8-A06X-01Z-00-DX1.21F19EDD-ABCB-4398-B210-D795BB7A34E3_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A8-A06X-01Z-00-DX1.21F19EDD-ABCB-4398-B210-D795BB7A34E3_1_1024.npy |
what is the grade of the invasive ductal carcinoma? A. grade 1 B. grade 2 C. grade 3 D. not mentioned | B. grade 2 | TCGA-BH-A0GZ-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0GZ-01Z-00-DX1.9AD4F493-A0A9-499D-B667-B33333FC1A51_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0GZ-01Z-00-DX1.9AD4F493-A0A9-499D-B667-B33333FC1A51_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0GZ-01Z-00-DX1.9AD4F493-A0A9-499D-B667-B33333FC1A51_1_1024.npy |
what is the er/pr and her-2/neu status of the invasive tumor cells? A. er and pr positive, her-2/neu negative B. er and pr negative, her-2/neu positive C. er and pr negative, her-2/neu negative D. er and pr positive, her-2/neu positive | A. er and pr positive, her-2/neu negative | TCGA-BH-A0GZ-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0GZ-01Z-00-DX1.9AD4F493-A0A9-499D-B667-B33333FC1A51_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0GZ-01Z-00-DX1.9AD4F493-A0A9-499D-B667-B33333FC1A51_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A0GZ-01Z-00-DX1.9AD4F493-A0A9-499D-B667-B33333FC1A51_1_1024.npy |
what type of carcinoma was confirmed? A. invasive ductal carcinoma B. metastatic carcinoma C. in situ carcinoma D. lobular carcinoma | A. invasive ductal carcinoma | TCGA-BH-A1F0-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1F0-01Z-00-DX1.E1557A67-230A-4337-AEC8-158258A917FF_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1F0-01Z-00-DX1.E1557A67-230A-4337-AEC8-158258A917FF_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1F0-01Z-00-DX1.E1557A67-230A-4337-AEC8-158258A917FF_1_1024.npy |
what additional testing was conducted? A. testing for lung function B. testing for kidney function C. testing for hormone receptors D. testing for brain function | C. testing for hormone receptors | TCGA-BH-A1F0-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1F0-01Z-00-DX1.E1557A67-230A-4337-AEC8-158258A917FF_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1F0-01Z-00-DX1.E1557A67-230A-4337-AEC8-158258A917FF_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1F0-01Z-00-DX1.E1557A67-230A-4337-AEC8-158258A917FF_1_1024.npy |
which genes were further tested? A. brca and her2/neu genes B. brca and tp53 genes C. kras and egfr genes D. cdh1 and nf1 genes | A. brca and her2/neu genes | TCGA-BH-A1F0-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1F0-01Z-00-DX1.E1557A67-230A-4337-AEC8-158258A917FF_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1F0-01Z-00-DX1.E1557A67-230A-4337-AEC8-158258A917FF_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1F0-01Z-00-DX1.E1557A67-230A-4337-AEC8-158258A917FF_1_1024.npy |
which nottingham grade is assigned to the invasive ductal carcinoma in the breast? A. grade 1 B. grade 2 C. grade 3 D. grade 4 | C. grade 3 | TCGA-BH-A18H-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A18H-01Z-00-DX1.4EC9108F-04C2-4B28-BD74-97A414C9A536_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A18H-01Z-00-DX1.4EC9108F-04C2-4B28-BD74-97A414C9A536_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A18H-01Z-00-DX1.4EC9108F-04C2-4B28-BD74-97A414C9A536_1_1024.npy |
is there lymphovascular space invasion present in the breast? A. yes B. no C. unknown D. not mentioned | B. no | TCGA-BH-A18H-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A18H-01Z-00-DX1.4EC9108F-04C2-4B28-BD74-97A414C9A536_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A18H-01Z-00-DX1.4EC9108F-04C2-4B28-BD74-97A414C9A536_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A18H-01Z-00-DX1.4EC9108F-04C2-4B28-BD74-97A414C9A536_1_1024.npy |
are the resection margins positive or negative for tumor? A. positive B. negative C. unknown D. not mentioned | B. negative | TCGA-BH-A18H-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A18H-01Z-00-DX1.4EC9108F-04C2-4B28-BD74-97A414C9A536_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A18H-01Z-00-DX1.4EC9108F-04C2-4B28-BD74-97A414C9A536_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A18H-01Z-00-DX1.4EC9108F-04C2-4B28-BD74-97A414C9A536_1_1024.npy |
what are the biopsy results for her2/neu? A. positive B. negative C. not mentioned D. inconclusive | B. negative | TCGA-BH-A28Q-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A28Q-01Z-00-DX1.C6D1CA93-6B2A-4722-9270-5D56592D833D_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A28Q-01Z-00-DX1.C6D1CA93-6B2A-4722-9270-5D56592D833D_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A28Q-01Z-00-DX1.C6D1CA93-6B2A-4722-9270-5D56592D833D_1_1024.npy |
what is the nottingham grade for the tumor's tubule formation? A. 1 B. 2 C. 3 D. 4 | C. 3 | TCGA-BH-A28Q-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A28Q-01Z-00-DX1.C6D1CA93-6B2A-4722-9270-5D56592D833D_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A28Q-01Z-00-DX1.C6D1CA93-6B2A-4722-9270-5D56592D833D_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A28Q-01Z-00-DX1.C6D1CA93-6B2A-4722-9270-5D56592D833D_1_1024.npy |
what non-neoplastic changes are found in the breast tissue? A. infiltrating ductal carcinoma B. invasive lobular carcinoma C. sclerosing adenosis D. fibrocystic changes | C. sclerosing adenosis | TCGA-BH-A28Q-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A28Q-01Z-00-DX1.C6D1CA93-6B2A-4722-9270-5D56592D833D_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A28Q-01Z-00-DX1.C6D1CA93-6B2A-4722-9270-5D56592D833D_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A28Q-01Z-00-DX1.C6D1CA93-6B2A-4722-9270-5D56592D833D_1_1024.npy |
what does the pathological slide indicate about the breast biopsy sample? A. presence of carcinoma B. absence of carcinoma C. benign findings D. unclear findings | A. presence of carcinoma | TCGA-B6-A0I2-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I2-01Z-00-DX1.885D2034-73B7-48AE-8343-631F89061C38_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I2-01Z-00-DX1.885D2034-73B7-48AE-8343-631F89061C38_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I2-01Z-00-DX1.885D2034-73B7-48AE-8343-631F89061C38_1_1024.npy |
what findings are mentioned in the breast biopsy sample? A. presence of carcinoma B. absence of carcinoma C. benign findings D. unclear findings | A. presence of carcinoma | TCGA-B6-A0I2-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I2-01Z-00-DX1.885D2034-73B7-48AE-8343-631F89061C38_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I2-01Z-00-DX1.885D2034-73B7-48AE-8343-631F89061C38_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I2-01Z-00-DX1.885D2034-73B7-48AE-8343-631F89061C38_1_1024.npy |
what was seen in the wide reexcision of the breast? A. benign tumor B. absence of tumor C. multiple tumors D. carcinoma | D. carcinoma | TCGA-B6-A0I2-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I2-01Z-00-DX1.885D2034-73B7-48AE-8343-631F89061C38_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I2-01Z-00-DX1.885D2034-73B7-48AE-8343-631F89061C38_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I2-01Z-00-DX1.885D2034-73B7-48AE-8343-631F89061C38_1_1024.npy |
how close is the tumor in the wide reexcision to the superior margin of resection? A. close B. distant C. unclear D. not mentioned | A. close | TCGA-B6-A0I2-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I2-01Z-00-DX1.885D2034-73B7-48AE-8343-631F89061C38_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I2-01Z-00-DX1.885D2034-73B7-48AE-8343-631F89061C38_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A0I2-01Z-00-DX1.885D2034-73B7-48AE-8343-631F89061C38_1_1024.npy |
what is the type of carcinoma found in the pathological slide? A. pleomorphic type B. infiltrating type C. papillary type D. comedo type | D. comedo type | TCGA-BH-A1FG-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FG-01Z-00-DX1.DA665FB6-9DD9-4B18-A925-2EFD9BC4C43B_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FG-01Z-00-DX1.DA665FB6-9DD9-4B18-A925-2EFD9BC4C43B_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FG-01Z-00-DX1.DA665FB6-9DD9-4B18-A925-2EFD9BC4C43B_1_1024.npy |
what is the finding related to the surgical margins in the slide? A. tumor invasion in surgical margins B. surgical margins contain tumor C. surgical margins are free of tumor D. surgical margins are not mentioned | C. surgical margins are free of tumor | TCGA-BH-A1FG-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FG-01Z-00-DX1.DA665FB6-9DD9-4B18-A925-2EFD9BC4C43B_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FG-01Z-00-DX1.DA665FB6-9DD9-4B18-A925-2EFD9BC4C43B_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FG-01Z-00-DX1.DA665FB6-9DD9-4B18-A925-2EFD9BC4C43B_1_1024.npy |
which receptors are positive in the slide? A. estrogen and progesterone receptors B. estrogen receptor C. progesterone receptor D. her-2/neu receptor | A. estrogen and progesterone receptors | TCGA-BH-A1FG-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FG-01Z-00-DX1.DA665FB6-9DD9-4B18-A925-2EFD9BC4C43B_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FG-01Z-00-DX1.DA665FB6-9DD9-4B18-A925-2EFD9BC4C43B_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FG-01Z-00-DX1.DA665FB6-9DD9-4B18-A925-2EFD9BC4C43B_1_1024.npy |
what further tests will be conducted to determine the er/pr status? A. her-2/neu status test B. er/pr status test C. tumor invasion test D. surgical margins test | B. er/pr status test | TCGA-BH-A1FG-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FG-01Z-00-DX1.DA665FB6-9DD9-4B18-A925-2EFD9BC4C43B_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FG-01Z-00-DX1.DA665FB6-9DD9-4B18-A925-2EFD9BC4C43B_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FG-01Z-00-DX1.DA665FB6-9DD9-4B18-A925-2EFD9BC4C43B_1_1024.npy |
what is the current her-2/neu test result? A. positive B. negative C. inconclusive D. not mentioned | B. negative | TCGA-BH-A1FG-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FG-01Z-00-DX1.DA665FB6-9DD9-4B18-A925-2EFD9BC4C43B_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FG-01Z-00-DX1.DA665FB6-9DD9-4B18-A925-2EFD9BC4C43B_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A1FG-01Z-00-DX1.DA665FB6-9DD9-4B18-A925-2EFD9BC4C43B_1_1024.npy |
what is the tumor classification mentioned in the slide? A. infiltrating ductal carcinoma B. lobular carcinoma C. medullary carcinoma D. mucinous carcinoma | A. infiltrating ductal carcinoma | TCGA-E9-A1QZ-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-E9-A1QZ-01Z-00-DX1.CDAECCA9-4F09-491F-A975-B775D47E46F0_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-E9-A1QZ-01Z-00-DX1.CDAECCA9-4F09-491F-A975-B775D47E46F0_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-E9-A1QZ-01Z-00-DX1.CDAECCA9-4F09-491F-A975-B775D47E46F0_1_1024.npy |
what is the grade of the tumor mentioned in the slide? A. well differentiated B. poorly differentiated C. undifferentiated D. moderately differentiated | D. moderately differentiated | TCGA-E9-A1QZ-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-E9-A1QZ-01Z-00-DX1.CDAECCA9-4F09-491F-A975-B775D47E46F0_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-E9-A1QZ-01Z-00-DX1.CDAECCA9-4F09-491F-A975-B775D47E46F0_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-E9-A1QZ-01Z-00-DX1.CDAECCA9-4F09-491F-A975-B775D47E46F0_1_1024.npy |
what information is not provided about the tumor? A. gross description B. microscopic description C. extent of the tumor D. all of the above | D. all of the above | TCGA-E9-A1QZ-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-E9-A1QZ-01Z-00-DX1.CDAECCA9-4F09-491F-A975-B775D47E46F0_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-E9-A1QZ-01Z-00-DX1.CDAECCA9-4F09-491F-A975-B775D47E46F0_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-E9-A1QZ-01Z-00-DX1.CDAECCA9-4F09-491F-A975-B775D47E46F0_1_1024.npy |
what is not specified in the slide about the tumor? A. lymph node involvement B. extracapsular invasion C. margin status D. all of the above | D. all of the above | TCGA-E9-A1QZ-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-E9-A1QZ-01Z-00-DX1.CDAECCA9-4F09-491F-A975-B775D47E46F0_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-E9-A1QZ-01Z-00-DX1.CDAECCA9-4F09-491F-A975-B775D47E46F0_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-E9-A1QZ-01Z-00-DX1.CDAECCA9-4F09-491F-A975-B775D47E46F0_1_1024.npy |
what is the final diagnosis for the breast lumpectomy? A. no malignancy present B. moderate differentiated invasive ductal carcinoma C. benign tumor present D. malignancy in surrounding tissue | B. moderate differentiated invasive ductal carcinoma | TCGA-WT-AB44-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-WT-AB44-01Z-00-DX1.B6ECEA7C-DA26-4B34-88CE-6834631DFA35_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-WT-AB44-01Z-00-DX1.B6ECEA7C-DA26-4B34-88CE-6834631DFA35_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-WT-AB44-01Z-00-DX1.B6ECEA7C-DA26-4B34-88CE-6834631DFA35_1_1024.npy |
what is the stage of the primary tumor? A. pt1c snno B. pt2 snno C. pt1b snno D. pt1a snno | A. pt1c snno | TCGA-WT-AB44-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-WT-AB44-01Z-00-DX1.B6ECEA7C-DA26-4B34-88CE-6834631DFA35_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-WT-AB44-01Z-00-DX1.B6ECEA7C-DA26-4B34-88CE-6834631DFA35_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-WT-AB44-01Z-00-DX1.B6ECEA7C-DA26-4B34-88CE-6834631DFA35_1_1024.npy |
what other findings were noted in the non-neoplastic breast tissue? A. no other findings present B. focal atypical ductal hyperplasia C. fibrosis and prior biopsy site changes D. both b and c are correct. | D. both b and c are correct. | TCGA-WT-AB44-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-WT-AB44-01Z-00-DX1.B6ECEA7C-DA26-4B34-88CE-6834631DFA35_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-WT-AB44-01Z-00-DX1.B6ECEA7C-DA26-4B34-88CE-6834631DFA35_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-WT-AB44-01Z-00-DX1.B6ECEA7C-DA26-4B34-88CE-6834631DFA35_1_1024.npy |
how many sentinel nodes were removed? A. 6 B. 4 C. 2 D. 1 | D. 1 | TCGA-WT-AB44-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-WT-AB44-01Z-00-DX1.B6ECEA7C-DA26-4B34-88CE-6834631DFA35_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-WT-AB44-01Z-00-DX1.B6ECEA7C-DA26-4B34-88CE-6834631DFA35_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-WT-AB44-01Z-00-DX1.B6ECEA7C-DA26-4B34-88CE-6834631DFA35_1_1024.npy |
are the assigned pathologic stages final? A. yes, in all cases B. no, only in cases where less than 6 sentinel nodes are removed C. no, only in cases where 6 or more sentinel nodes and/or nonsentinel nodes are removed D. none of the above. | C. no, only in cases where 6 or more sentinel nodes and/or nonsentinel nodes are removed | TCGA-WT-AB44-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-WT-AB44-01Z-00-DX1.B6ECEA7C-DA26-4B34-88CE-6834631DFA35_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-WT-AB44-01Z-00-DX1.B6ECEA7C-DA26-4B34-88CE-6834631DFA35_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-WT-AB44-01Z-00-DX1.B6ECEA7C-DA26-4B34-88CE-6834631DFA35_1_1024.npy |
what is the tumor type mentioned in the slide? A. lobular carcinoma B. ductal carcinoma in situ C. invasive ductal carcinoma D. medullary carcinoma | C. invasive ductal carcinoma | TCGA-A8-A085-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A8-A085-01Z-00-DX1.0DA29016-AEA4-4E5F-B679-83095A79F5B3_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A8-A085-01Z-00-DX1.0DA29016-AEA4-4E5F-B679-83095A79F5B3_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A8-A085-01Z-00-DX1.0DA29016-AEA4-4E5F-B679-83095A79F5B3_1_1024.npy |
which tissue has the tumor infiltrated? A. muscle tissue B. bone tissue C. connective tissue D. nervous tissue | C. connective tissue | TCGA-A8-A085-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A8-A085-01Z-00-DX1.0DA29016-AEA4-4E5F-B679-83095A79F5B3_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A8-A085-01Z-00-DX1.0DA29016-AEA4-4E5F-B679-83095A79F5B3_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A8-A085-01Z-00-DX1.0DA29016-AEA4-4E5F-B679-83095A79F5B3_1_1024.npy |
what is the tumor grade mentioned in the slide? A. grade i B. grade ii C. grade iii D. grade iv | C. grade iii | TCGA-A8-A085-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A8-A085-01Z-00-DX1.0DA29016-AEA4-4E5F-B679-83095A79F5B3_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A8-A085-01Z-00-DX1.0DA29016-AEA4-4E5F-B679-83095A79F5B3_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A8-A085-01Z-00-DX1.0DA29016-AEA4-4E5F-B679-83095A79F5B3_1_1024.npy |
what does nos stand for in the tumor classification? A. not otherwise specified B. no other symptoms C. non-oncogenic syndrome D. not overly significant | A. not otherwise specified | TCGA-A8-A085-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A8-A085-01Z-00-DX1.0DA29016-AEA4-4E5F-B679-83095A79F5B3_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A8-A085-01Z-00-DX1.0DA29016-AEA4-4E5F-B679-83095A79F5B3_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A8-A085-01Z-00-DX1.0DA29016-AEA4-4E5F-B679-83095A79F5B3_1_1024.npy |
what is the stage of the cancer? A. t1 B. t2 C. t3 D. t4 | A. t1 | TCGA-A7-A0CD-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A7-A0CD-01Z-00-DX1.F045B9C8-049C-41BF-8432-EF89F236D34D_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A7-A0CD-01Z-00-DX1.F045B9C8-049C-41BF-8432-EF89F236D34D_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A7-A0CD-01Z-00-DX1.F045B9C8-049C-41BF-8432-EF89F236D34D_1_1024.npy |
what non-tumorous features were observed in the sample? A. invasive ductal carcinoma B. vascular invasion C. apocrine metaplasia, cyst formation, and intraductal epithelial hyperplasia without atypia D. no non-tumorous features were observed | C. apocrine metaplasia, cyst formation, and intraductal epithelial hyperplasia without atypia | TCGA-A7-A0CD-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A7-A0CD-01Z-00-DX1.F045B9C8-049C-41BF-8432-EF89F236D34D_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A7-A0CD-01Z-00-DX1.F045B9C8-049C-41BF-8432-EF89F236D34D_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A7-A0CD-01Z-00-DX1.F045B9C8-049C-41BF-8432-EF89F236D34D_1_1024.npy |
are the prognostic markers specified in the slide? A. yes B. no C. not enough information provided D. none of the above | B. no | TCGA-A7-A0CD-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A7-A0CD-01Z-00-DX1.F045B9C8-049C-41BF-8432-EF89F236D34D_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A7-A0CD-01Z-00-DX1.F045B9C8-049C-41BF-8432-EF89F236D34D_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A7-A0CD-01Z-00-DX1.F045B9C8-049C-41BF-8432-EF89F236D34D_1_1024.npy |
what is the grade of the tumor? A. 1 B. 2 C. 3 D. not specified | B. 2 | TCGA-A7-A0CD-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A7-A0CD-01Z-00-DX1.F045B9C8-049C-41BF-8432-EF89F236D34D_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A7-A0CD-01Z-00-DX1.F045B9C8-049C-41BF-8432-EF89F236D34D_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-A7-A0CD-01Z-00-DX1.F045B9C8-049C-41BF-8432-EF89F236D34D_1_1024.npy |
what type of cancer is indicated in the pathological slide? A. ductal carcinoma B. infiltrating lobular carcinoma C. in situ carcinoma D. fibrocystic changes | B. infiltrating lobular carcinoma | TCGA-B6-A2IU-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A2IU-01Z-00-DX1.3C7DF701-4ED9-4989-AA63-A6B7B105F6EE_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A2IU-01Z-00-DX1.3C7DF701-4ED9-4989-AA63-A6B7B105F6EE_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A2IU-01Z-00-DX1.3C7DF701-4ED9-4989-AA63-A6B7B105F6EE_1_1024.npy |
what is the status of lymphatic/vascular invasion? A. present B. absent C. unknown D. in situ | B. absent | TCGA-B6-A2IU-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A2IU-01Z-00-DX1.3C7DF701-4ED9-4989-AA63-A6B7B105F6EE_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A2IU-01Z-00-DX1.3C7DF701-4ED9-4989-AA63-A6B7B105F6EE_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A2IU-01Z-00-DX1.3C7DF701-4ED9-4989-AA63-A6B7B105F6EE_1_1024.npy |
what does the surgical margin status indicate? A. positive B. negative C. unknown D. in situ | B. negative | TCGA-B6-A2IU-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A2IU-01Z-00-DX1.3C7DF701-4ED9-4989-AA63-A6B7B105F6EE_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A2IU-01Z-00-DX1.3C7DF701-4ED9-4989-AA63-A6B7B105F6EE_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-B6-A2IU-01Z-00-DX1.3C7DF701-4ED9-4989-AA63-A6B7B105F6EE_1_1024.npy |
what is the nottingham score for the tumor? A. 4/9 B. 5/9 C. 6/9 D. 7/9 | C. 6/9 | TCGA-BH-A42V-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A42V-01Z-00-DX1.B6D78256-05D1-45FA-826A-1B8554D60B7D_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A42V-01Z-00-DX1.B6D78256-05D1-45FA-826A-1B8554D60B7D_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A42V-01Z-00-DX1.B6D78256-05D1-45FA-826A-1B8554D60B7D_1_1024.npy |
what type of carcinoma is present in the breast? A. infiltrating lobular carcinoma B. in situ carcinoma C. infiltrating ductal carcinoma D. medullary carcinoma | C. infiltrating ductal carcinoma | TCGA-BH-A42V-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A42V-01Z-00-DX1.B6D78256-05D1-45FA-826A-1B8554D60B7D_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A42V-01Z-00-DX1.B6D78256-05D1-45FA-826A-1B8554D60B7D_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A42V-01Z-00-DX1.B6D78256-05D1-45FA-826A-1B8554D60B7D_1_1024.npy |
what receptors is the tumor positive for? A. estrogen receptors, progesterone receptors, and her2/neu B. estrogen receptors only C. progesterone receptors only D. her2/neu only | A. estrogen receptors, progesterone receptors, and her2/neu | TCGA-BH-A42V-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A42V-01Z-00-DX1.B6D78256-05D1-45FA-826A-1B8554D60B7D_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A42V-01Z-00-DX1.B6D78256-05D1-45FA-826A-1B8554D60B7D_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A42V-01Z-00-DX1.B6D78256-05D1-45FA-826A-1B8554D60B7D_1_1024.npy |
does the slide mention the presence of distant metastasis or spread? A. yes B. no C. not specified D. cannot be determined | B. no | TCGA-BH-A42V-01Z-00-DX1 | TCGA-BRCA | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A42V-01Z-00-DX1.B6D78256-05D1-45FA-826A-1B8554D60B7D_0_1024.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A42V-01Z-00-DX1.B6D78256-05D1-45FA-826A-1B8554D60B7D_1_512.npy | /bask/projects/p/phwq4930-renal-canc/Zeyu/WSI_Dataset/Conch/TCGA-BR/TCGA-BH-A42V-01Z-00-DX1.B6D78256-05D1-45FA-826A-1B8554D60B7D_1_1024.npy |
Subsets and Splits