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https://api.github.com/repos/huggingface/datasets/issues/3070 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3070/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3070/comments | https://api.github.com/repos/huggingface/datasets/issues/3070/events | https://github.com/huggingface/datasets/pull/3070 | 1,024,856,745 | PR_kwDODunzps4tIBRp | 3,070 | Fix Windows CI with FileNotFoundError when stting up s3_base fixture | {
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"Thanks ! Sorry for the inconvenience ^^' "
] | 1,634,107,741,000 | 1,634,115,313,000 | 1,634,107,788,000 | MEMBER | null | false | {
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] | null | [] | 1,634,104,346,000 | 1,634,112,349,000 | 1,634,107,788,000 | MEMBER | null | null | null | ## Describe the bug
After commit 9353fc863d0c99ab0427f83cc5a4f04fcf52f1df, the CI fails on Windows with FileNotFoundError when stting up s3_base fixture. See: https://app.circleci.com/pipelines/github/huggingface/datasets/8151/workflows/5db8d154-badd-4d3d-b202-ca7a318997a2/jobs/50321
Error summary:
```
ERROR tests/test_arrow_dataset.py::test_dummy_dataset_serialize_s3 - FileNotF...
ERROR tests/test_dataset_dict.py::test_dummy_dataset_serialize_s3 - FileNotFo...
```
Stack trace:
```
______________ ERROR at setup of test_dummy_dataset_serialize_s3 ______________
[gw0] win32 -- Python 3.6.8 C:\tools\miniconda3\python.exe
@pytest.fixture()
def s3_base():
# writable local S3 system
import shlex
import subprocess
# Mocked AWS Credentials for moto.
old_environ = os.environ.copy()
os.environ.update(S3_FAKE_ENV_VARS)
> proc = subprocess.Popen(shlex.split("moto_server s3 -p %s" % s3_port))
tests\s3_fixtures.py:32:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
C:\tools\miniconda3\lib\subprocess.py:729: in __init__
restore_signals, start_new_session)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <subprocess.Popen object at 0x0000012BB8A4B908>
args = 'moto_server s3 -p 5555', executable = None, preexec_fn = None
close_fds = True, pass_fds = (), cwd = None, env = None
startupinfo = <subprocess.STARTUPINFO object at 0x0000012BB8177630>
creationflags = 0, shell = False, p2cread = -1, p2cwrite = -1, c2pread = -1
c2pwrite = -1, errread = -1, errwrite = -1, unused_restore_signals = True
unused_start_new_session = False
def _execute_child(self, args, executable, preexec_fn, close_fds,
pass_fds, cwd, env,
startupinfo, creationflags, shell,
p2cread, p2cwrite,
c2pread, c2pwrite,
errread, errwrite,
unused_restore_signals, unused_start_new_session):
"""Execute program (MS Windows version)"""
assert not pass_fds, "pass_fds not supported on Windows."
if not isinstance(args, str):
args = list2cmdline(args)
# Process startup details
if startupinfo is None:
startupinfo = STARTUPINFO()
if -1 not in (p2cread, c2pwrite, errwrite):
startupinfo.dwFlags |= _winapi.STARTF_USESTDHANDLES
startupinfo.hStdInput = p2cread
startupinfo.hStdOutput = c2pwrite
startupinfo.hStdError = errwrite
if shell:
startupinfo.dwFlags |= _winapi.STARTF_USESHOWWINDOW
startupinfo.wShowWindow = _winapi.SW_HIDE
comspec = os.environ.get("COMSPEC", "cmd.exe")
args = '{} /c "{}"'.format (comspec, args)
# Start the process
try:
hp, ht, pid, tid = _winapi.CreateProcess(executable, args,
# no special security
None, None,
int(not close_fds),
creationflags,
env,
os.fspath(cwd) if cwd is not None else None,
> startupinfo)
E FileNotFoundError: [WinError 2] The system cannot find the file specified
C:\tools\miniconda3\lib\subprocess.py:1017: FileNotFoundError
``` | {
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https://api.github.com/repos/huggingface/datasets/issues/3068 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3068/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3068/comments | https://api.github.com/repos/huggingface/datasets/issues/3068/events | https://github.com/huggingface/datasets/pull/3068 | 1,024,681,264 | PR_kwDODunzps4tHhOC | 3,068 | feat: increase streaming retry config | {
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"@lhoestq I had 2 runs for more than 2 days each, continuously streaming (they were failing before with 3 retries at 1 sec interval).\r\n\r\nThey are running on TPU's (so great internet connection) and only had connection errors a few times each (3 & 4). Each time it worked after only 1 retry.\r\nThe reason for a higher number of retries is for local connections. It would allow for almost 2mn of a wifi/ethernet disconnection. In practice this should not happen very often.\r\n\r\nLet me know if you think it's too much."
] | 1,634,090,450,000 | 1,634,117,156,000 | 1,634,117,154,000 | CONTRIBUTOR | null | false | {
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} | Increase streaming config parameters:
* retry interval set to 5 seconds
* max retries set to 20 (so 1mn 40s) | {
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https://api.github.com/repos/huggingface/datasets/issues/3067 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3067/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3067/comments | https://api.github.com/repos/huggingface/datasets/issues/3067/events | https://github.com/huggingface/datasets/pull/3067 | 1,024,023,185 | PR_kwDODunzps4tFSCy | 3,067 | add story_cloze | {
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"Thanks for pushing this dataset :)\r\n\r\nAccording to the CI, the file `cloze_test_val__spring2016 - cloze_test_ALL_val.csv` is missing in the dummy data zip file (the zip files seem empty). Feel free to add this file with 4-5 lines and it should be good\r\n\r\nAnd you can fix the YAML tags with\r\n```yaml\r\npretty_name: Story Cloze Test\r\n```\r\nand filling the other tags task_categories and task_ids\r\n\r\nIf the dataset doesn exist on paperswithcode, you can just leave\r\n```yaml\r\npaperswithcode_id: null\r\n```",
"@lhoestq can't fix the last test fails.",
"> Thanks @zaidalyafeai, the failing test is due to an issue in the master branch, that has already been fixed.\r\n> \r\n> You can include the fix:\r\n> \r\n> ```\r\n> git checkout add_story_cloze\r\n> git fetch upstream master\r\n> git merge upstream/master\r\n> ```\r\n\r\nThanks @albertvillanova, passed all the tests now. ",
"Thanks Albert, I fixed the suggested comments. This dataset has no train splits, it is only used for evaluation."
] | 1,634,056,613,000 | 1,634,132,893,000 | 1,634,132,893,000 | CONTRIBUTOR | null | false | {
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https://api.github.com/repos/huggingface/datasets/issues/3066 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3066/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3066/comments | https://api.github.com/repos/huggingface/datasets/issues/3066/events | https://github.com/huggingface/datasets/pull/3066 | 1,024,005,311 | PR_kwDODunzps4tFObl | 3,066 | Add iter_archive | {
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} | Added the `iter_archive` method for the StreamingDownloadManager.
It was already implemented in the regular DownloadManager.
Now it can be used to stream from TAR archives as mentioned in https://github.com/huggingface/datasets/issues/2829
I also updated the `food101` dataset as an example.
Any image/audio dataset using TAR archives can be updated to use `iter_archive` in order to be streamable :)
cc @severo
Fix #2829. | {
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https://api.github.com/repos/huggingface/datasets/issues/3065 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3065/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3065/comments | https://api.github.com/repos/huggingface/datasets/issues/3065/events | https://github.com/huggingface/datasets/pull/3065 | 1,023,951,322 | PR_kwDODunzps4tFDjk | 3,065 | Fix test command after refac | {
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https://api.github.com/repos/huggingface/datasets/issues/3064 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3064/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3064/comments | https://api.github.com/repos/huggingface/datasets/issues/3064/events | https://github.com/huggingface/datasets/issues/3064 | 1,023,900,075 | I_kwDODunzps49B3mr | 3,064 | Make `interleave_datasets` more robust | {
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"Hi @lhoestq Any response on this issue?",
"Hi ! Sorry for the late response\r\n\r\nI agree `interleave_datasets` would benefit a lot from having more flexibility. If I understand correctly it would be nice to be able to define stopping strategies like `stop=\"first_exhausted\"` (default) or `stop=\"all_exhausted\"`. If you'd like to contribute this feature I'd be happy to give you some pointers :)\r\n\r\nAlso one can already set the max number of iterations per dataset by doing `dataset.take(n)` on the dataset that should only have `n` samples.\r\n\r\nRegarding the `iter_cnt` counter, I think this requires a bit more thoughts, since we might have to be able to backpropagate the the counter if `map` or other transforms have been applied after `interleave_datasets`. ",
"@sbmaruf I just notice that (1)`interleave_datasets` only samples indices once and reuse for all epochs, and (2) it's limited by the smallest dataset. Do you figure out an alternative way to achieve the same purpose?"
] | 1,634,049,293,000 | 1,659,170,846,000 | null | NONE | null | null | null | **Is your feature request related to a problem? Please describe.**
Right now there are few hiccups using `interleave_datasets`. Interleaved dataset iterates until the smallest dataset completes it's iterator. In this way larger datasets may not complete full epoch of iteration.
It creates new problems in calculation of epoch since there are no way to track which dataset from `interleave_datasets` completes how many epoch.
**Describe the solution you'd like**
For `interleave_datasets` module,
- [ ] Add a boolean argument `--stop-iter` in `interleave_datasets` that enables dataset to either iterate infinite amount of time or not. That means it should not return `StopIterator` exception in case `--stop-iter=False`.
- [ ] Internal list variable `iter_cnt` that explains how many times (in steps/epochs) each dataset iterates at a given point.
- [ ] Add an argument `--max-iter` (list type) that explain maximum amount of time each of the dataset can iterate. After complete `--max-iter` of one dataset, other dataset should continue sampling and when all the dataset finish their respective `--max-iter`, only then return `StopIterator`
Note: I'm new to `datasets` api. May be these features are already there in the datasets.
Since multitask training is the latest trends, I believe this feature would make the `datasets` api more popular.
@lhoestq | {
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https://api.github.com/repos/huggingface/datasets/issues/3063 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3063/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3063/comments | https://api.github.com/repos/huggingface/datasets/issues/3063/events | https://github.com/huggingface/datasets/issues/3063 | 1,023,588,297 | I_kwDODunzps49ArfJ | 3,063 | Windows CI is unable to test streaming properly because of SSL issues | {
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"I think this problem is already fixed:\r\n```python\r\nIn [4]: import fsspec\r\n ...:\r\n ...: url = \"https://moon-staging.huggingface.co/datasets/__DUMMY_TRANSFORMERS_USER__/my-dataset-16242824690709/resolve/main/.gitattributes\"\r\n ...:\r\n ...: fsspec.open(url).open()\r\nOut[4]: <File-like object HTTPFileSystem, https://moon-staging.huggingface.co/datasets/__DUMMY_TRANSFORMERS_USER__/my-dataset-16242824690709/resolve/main/.gitattribu\r\n```",
"No I'm still having this issue on my windows, and so does the CI"
] | 1,634,031,220,000 | 1,661,353,169,000 | 1,661,353,169,000 | MEMBER | null | null | null | In https://github.com/huggingface/datasets/pull/3041 the windows tests were skipped because of SSL issues with moon-staging.huggingface.co:443
The issue appears only on windows with asyncio. On Linux it works. With requests it works as well. And with the production environment huggingface.co it also works.
to reproduce on windows:
```python
import fsspec
# use any URL to a file in a dataset repo
url = "https://moon-staging.huggingface.co/datasets/__DUMMY_TRANSFORMERS_USER__/my-dataset-16242824690709/resolve/main/.gitattributes"
fsspec.open(url).open()
```
raises
```python
FileNotFoundError: https://moon-staging.huggingface.co/datasets/__DUMMY_TRANSFORMERS_USER__/my-dataset-16242824690709/resolve/main/.gitattributes
```
because of
```python
aiohttp.client_exceptions.ClientConnectorCertificateError: Cannot connect to host moon-staging.huggingface.co:443 ssl:True [SSLCertVerificationError: (1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate has expired (_ssl.c:1131)')]
``` | {
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https://api.github.com/repos/huggingface/datasets/issues/3062 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3062/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3062/comments | https://api.github.com/repos/huggingface/datasets/issues/3062/events | https://github.com/huggingface/datasets/pull/3062 | 1,023,209,592 | PR_kwDODunzps4tCxfK | 3,062 | Update summary on PyPi beyond NLP | {
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https://api.github.com/repos/huggingface/datasets/issues/3061 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3061/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3061/comments | https://api.github.com/repos/huggingface/datasets/issues/3061/events | https://github.com/huggingface/datasets/issues/3061 | 1,023,103,119 | I_kwDODunzps48-1CP | 3,061 | Feature request : add leave=True to dataset.map to enable tqdm nested bars (and whilst we're at it couldn't we get a way to access directly tqdm underneath?) | {
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"@lhoestq, @albertvillanova can we have `**tqdm_kwargs` in `map`? If there are any fields that are important to our tqdm (like iterable or unit), we can pop them before initialising the tqdm object so as to avoid duplicity.",
"Hi ! Sounds like a good idea :)\r\n\r\nAlso I think it would be better to have this as an actual parameters instead of kwargs to make it clearer"
] | 1,633,985,389,000 | 1,634,895,250,000 | null | NONE | null | null | null | **A clear and concise description of what you want to happen.**
It would be so nice to be able to nest HuggingFace `Datasets.map() ` progress bars in the grander scheme of things and whilst we're at it why not other functions.
**Describe alternatives you've considered**
By the way is there not a way to directly interact with underlying tqdm module ? **kwargs-ish?
**Additional context**
Furthering tqdm integration #2374 and huggingface/transformers#11797 solutioned by huggingface/transformers#12226 provided with tqdm description as `desc=`
@sgugger @bhavitvyamalik | {
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https://api.github.com/repos/huggingface/datasets/issues/3060 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3060/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3060/comments | https://api.github.com/repos/huggingface/datasets/issues/3060/events | https://github.com/huggingface/datasets/issues/3060 | 1,022,936,396 | I_kwDODunzps48-MVM | 3,060 | load_dataset('openwebtext') yields "Compressed file ended before the end-of-stream marker was reached" | {
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"Hi @RylanSchaeffer, thanks for reporting.\r\n\r\nI'm sorry, but I was not able to reproduce your problem.\r\n\r\nNormally, the reason for this type of error is that, during your download of the data files, this was not fully complete.\r\n\r\nCould you please try to load the dataset again but forcing its redownload? Please use:\r\n```python\r\ndataset = load_dataset(\"openwebtext\", download_mode=\"FORCE_REDOWNLOAD\")\r\n```\r\n\r\nLet me know if the problem persists.",
"I close this issue for the moment. Feel free to re-open it again if the problem persists."
] | 1,633,971,927,000 | 1,635,400,341,000 | 1,635,400,341,000 | NONE | null | null | null | ## Describe the bug
When I try `load_dataset('openwebtext')`, I receive a "EOFError: Compressed file ended before the end-of-stream marker was reached" error.
## Steps to reproduce the bug
```
from datasets import load_dataset
dataset = load_dataset('openwebtext')
```
## Expected results
I expect the `dataset` variable to be properly constructed.
## Actual results
```
File "/home/rschaef/CoCoSci-Language-Distillation/distillation_v2/ratchet_learning/tasks/base.py", line 37, in create_dataset
dataset_str,
File "/home/rschaef/CoCoSci-Language-Distillation/cocosci/lib/python3.6/site-packages/datasets/load.py", line 1117, in load_dataset
use_auth_token=use_auth_token,
File "/home/rschaef/CoCoSci-Language-Distillation/cocosci/lib/python3.6/site-packages/datasets/builder.py", line 637, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/home/rschaef/CoCoSci-Language-Distillation/cocosci/lib/python3.6/site-packages/datasets/builder.py", line 704, in _download_and_prepare
split_generators = self._split_generators(dl_manager, **split_generators_kwargs)
File "/home/rschaef/.cache/huggingface/modules/datasets_modules/datasets/openwebtext/85b3ae7051d2d72e7c5fdf6dfb462603aaa26e9ed506202bf3a24d261c6c40a1/openwebtext.py", line 61, in _split_generators
dl_dir = dl_manager.download_and_extract(_URL)
File "/home/rschaef/CoCoSci-Language-Distillation/cocosci/lib/python3.6/site-packages/datasets/utils/download_manager.py", line 284, in download_and_extract
return self.extract(self.download(url_or_urls))
File "/home/rschaef/CoCoSci-Language-Distillation/cocosci/lib/python3.6/site-packages/datasets/utils/download_manager.py", line 261, in extract
partial(cached_path, download_config=download_config), path_or_paths, num_proc=num_proc, disable_tqdm=False
File "/home/rschaef/CoCoSci-Language-Distillation/cocosci/lib/python3.6/site-packages/datasets/utils/py_utils.py", line 197, in map_nested
return function(data_struct)
File "/home/rschaef/CoCoSci-Language-Distillation/cocosci/lib/python3.6/site-packages/datasets/utils/file_utils.py", line 316, in cached_path
output_path, force_extract=download_config.force_extract
File "/home/rschaef/CoCoSci-Language-Distillation/cocosci/lib/python3.6/site-packages/datasets/utils/extract.py", line 40, in extract
self.extractor.extract(input_path, output_path, extractor=extractor)
File "/home/rschaef/CoCoSci-Language-Distillation/cocosci/lib/python3.6/site-packages/datasets/utils/extract.py", line 179, in extract
return extractor.extract(input_path, output_path)
File "/home/rschaef/CoCoSci-Language-Distillation/cocosci/lib/python3.6/site-packages/datasets/utils/extract.py", line 53, in extract
tar_file.extractall(output_path)
File "/usr/lib/python3.6/tarfile.py", line 2010, in extractall
numeric_owner=numeric_owner)
File "/usr/lib/python3.6/tarfile.py", line 2052, in extract
numeric_owner=numeric_owner)
File "/usr/lib/python3.6/tarfile.py", line 2122, in _extract_member
self.makefile(tarinfo, targetpath)
File "/usr/lib/python3.6/tarfile.py", line 2171, in makefile
copyfileobj(source, target, tarinfo.size, ReadError, bufsize)
File "/usr/lib/python3.6/tarfile.py", line 249, in copyfileobj
buf = src.read(bufsize)
File "/usr/lib/python3.6/lzma.py", line 200, in read
return self._buffer.read(size)
File "/usr/lib/python3.6/_compression.py", line 68, in readinto
data = self.read(len(byte_view))
File "/usr/lib/python3.6/_compression.py", line 99, in read
raise EOFError("Compressed file ended before the "
python-BaseException
EOFError: Compressed file ended before the end-of-stream marker was reached
```
## Environment info
- `datasets` version: 1.12.1
- Platform: Linux-4.4.0-173-generic-x86_64-with-Ubuntu-16.04-xenial
- Python version: 3.6.10
- PyArrow version: 5.0.0 | {
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https://api.github.com/repos/huggingface/datasets/issues/3059 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3059/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3059/comments | https://api.github.com/repos/huggingface/datasets/issues/3059/events | https://github.com/huggingface/datasets/pull/3059 | 1,022,620,057 | PR_kwDODunzps4tA54w | 3,059 | Fix task reloading from cache | {
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"url": "https://api.github.com/repos/huggingface/datasets/pulls/3059",
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} | When reloading a dataset from the cache when doing `map`, the tasks templates were kept instead of being updated regarding the output of the `map` function. This is an issue because we drop the tasks templates that are not compatible anymore after `map`, for example if a column of the template was removed.
This PR fixes this and for convenience introduces a decorator `@transmit_tasks` that takes care of doing this verification, similar to the `@transmit_format` decorator.
This should fix issue https://github.com/huggingface/datasets/issues/3047 cc @sgugger | {
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https://api.github.com/repos/huggingface/datasets/issues/3058 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3058/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3058/comments | https://api.github.com/repos/huggingface/datasets/issues/3058/events | https://github.com/huggingface/datasets/issues/3058 | 1,022,612,664 | I_kwDODunzps4889S4 | 3,058 | Dataset wikipedia and Bookcorpusopen cannot be fetched from dataloader. | {
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] | closed | false | null | [] | null | [
"Hi ! I think this issue is more related to the `transformers` project. Could you open an issue on https://github.com/huggingface/transformers ?\r\n\r\nAnyway I think the issue could be that both wikipedia and bookcorpusopen have an additional \"title\" column, contrary to wikitext which only has a \"text\" column. After calling `load_dataset`, can you try doing `dataset = dataset.remove_columns(\"title\")` ?",
"Removing the \"title\" column works! Thanks for your advice.\r\n\r\nMaybe I should still create an issue to `transformers' to mark this solution?"
] | 1,633,953,299,000 | 1,642,601,029,000 | 1,642,601,029,000 | NONE | null | null | null | ## Describe the bug
I have used the previous version of `transformers` and `datasets`. The dataset `wikipedia` can be successfully used. Recently, I upgrade them to the newest version and find it raises errors. I also tried other datasets. The `wikitext` works and the `bookcorpusopen` raises the same errors as `wikipedia`.
## Steps to reproduce the bug
Run the `run_mlm_no_trainer.py` and the given script on this [link](https://github.com/huggingface/transformers/tree/master/examples/pytorch/language-modeling). Change the dataset from wikitext to wikipedia or bookcorpusopen. BTW, the library transformers is of version 4.11.3.
## Expected results
The data batchs are fetched from the data loader and train.
## Actual results
The first time to fetch data batch occurs error.
`Traceback (most recent call last):
File "/home/zyli/anaconda3/envs/LatestStacking/lib/python3.7/site-packages/transformers/tokenization_utils_base.py", line 705, in convert_to_tensors
tensor = as_tensor(value)
ValueError: too many dimensions 'str'
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "src/original_run_mlm_no_trainer.py", line 528, in <module>
main()
File "src/original_run_mlm_no_trainer.py", line 488, in main
for step, batch in enumerate(train_dataloader):
File "/home/zyli/anaconda3/envs/LatestStacking/lib/python3.7/site-packages/accelerate/data_loader.py", line 303, in __iter__
for batch in super().__iter__():
File "/home/zyli/anaconda3/envs/LatestStacking/lib/python3.7/site-packages/torch/utils/data/dataloader.py", line 517, in __next__
data = self._next_data()
File "/home/zyli/anaconda3/envs/LatestStacking/lib/python3.7/site-packages/torch/utils/data/dataloader.py", line 557, in _next_data
data = self._dataset_fetcher.fetch(index) # may raise StopIteration
File "/home/zyli/anaconda3/envs/LatestStacking/lib/python3.7/site-packages/torch/utils/data/_utils/fetch.py", line 47, in fetch
return self.collate_fn(data)
File "/home/zyli/anaconda3/envs/LatestStacking/lib/python3.7/site-packages/transformers/data/data_collator.py", line 41, in __call__
return self.torch_call(features)
File "/home/zyli/anaconda3/envs/LatestStacking/lib/python3.7/site-packages/transformers/data/data_collator.py", line 671, in torch_call
batch = self.tokenizer.pad(examples, return_tensors="pt", pad_to_multiple_of=self.pad_to_multiple_of)
File "/home/zyli/anaconda3/envs/LatestStacking/lib/python3.7/site-packages/transformers/tokenization_utils_base.py", line 2774, in pad
return BatchEncoding(batch_outputs, tensor_type=return_tensors)
File "/home/zyli/anaconda3/envs/LatestStacking/lib/python3.7/site-packages/transformers/tokenization_utils_base.py", line 210, in __init__
self.convert_to_tensors(tensor_type=tensor_type, prepend_batch_axis=prepend_batch_axis)
File "/home/zyli/anaconda3/envs/LatestStacking/lib/python3.7/site-packages/transformers/tokenization_utils_base.py", line 722, in convert_to_tensors
"Unable to create tensor, you should probably activate truncation and/or padding "
ValueError: Unable to create tensor, you should probably activate truncation and/or padding with 'padding=True' 'truncation=True' to have batched tensors with the same length.
`
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.12.1
- Platform: Linux-5.8.0-59-generic-x86_64-with-debian-bullseye-sid
- Python version: 3.7.6
- PyArrow version: 5.0.0
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https://api.github.com/repos/huggingface/datasets/issues/3057 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3057/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3057/comments | https://api.github.com/repos/huggingface/datasets/issues/3057/events | https://github.com/huggingface/datasets/issues/3057 | 1,022,508,315 | I_kwDODunzps488j0b | 3,057 | Error in per class precision computation | {
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] | closed | false | null | [] | null | [
"Hi @tidhamecha2, thanks for reporting.\r\n\r\nIndeed, we fixed this issue just one week ago: #3008\r\n\r\nThe fix will be included in our next version release.\r\n\r\nIn the meantime, you can incorporate the fix by installing `datasets` from the master branch:\r\n```\r\npip install -U git+ssh://git@github.com/huggingface/datasets.git@master#egg=datasest\r\n```\r\nor\r\n```\r\npip install -U git+https://github.com/huggingface/datasets.git@master#egg=datasets\r\n```"
] | 1,633,946,719,000 | 1,633,947,464,000 | 1,633,947,376,000 | NONE | null | null | null | ## Describe the bug
When trying to get the per class precision values by providing `average=None`, following error is thrown `ValueError: can only convert an array of size 1 to a Python scalar`
## Steps to reproduce the bug
```python
from datasets import load_dataset, load_metric
precision_metric = load_metric("precision")
predictions = [0, 2, 1, 0, 0, 1]
references = [0, 1, 2, 0, 1, 2]
results = precision_metric.compute(predictions=predictions, references=references, average=None)
```
## Expected results
` {'precision': array([0.66666667, 0. , 0. ])}`
as per https://github.com/huggingface/datasets/blob/master/metrics/precision/precision.py
## Actual results
```
output = self._compute(predictions=predictions, references=references, **kwargs)
File "~/.cache/huggingface/modules/datasets_modules/metrics/precision/94709a71c6fe37171ef49d3466fec24dee9a79846c9f176dff66a649e9811690/precision.py", line 110, in _compute
sample_weight=sample_weight,
ValueError: can only convert an array of size 1 to a Python scalar
```
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.12.1
- Platform: linux
- Python version: 3.6.9
- PyArrow version: 5.0.0
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https://api.github.com/repos/huggingface/datasets/issues/3056 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3056/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3056/comments | https://api.github.com/repos/huggingface/datasets/issues/3056/events | https://github.com/huggingface/datasets/pull/3056 | 1,022,345,564 | PR_kwDODunzps4tAB9h | 3,056 | Fix meteor metric for version >= 3.6.4 | {
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"url": "https://api.github.com/repos/huggingface/datasets/pulls/3056",
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} | After `nltk` update, the meteor metric expects pre-tokenized inputs (breaking change).
This PR fixes this issue, while maintaining compatibility with older versions. | {
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https://api.github.com/repos/huggingface/datasets/issues/3055 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3055/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3055/comments | https://api.github.com/repos/huggingface/datasets/issues/3055/events | https://github.com/huggingface/datasets/issues/3055 | 1,022,319,238 | I_kwDODunzps4871qG | 3,055 | CI test suite fails after meteor metric update | {
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] | null | [] | 1,633,934,232,000 | 1,633,937,431,000 | 1,633,937,431,000 | MEMBER | null | null | null | ## Describe the bug
CI test suite fails: https://app.circleci.com/pipelines/github/huggingface/datasets/8110/workflows/f059ba43-9154-4632-bebb-82318447ddc9/jobs/50010
Stack trace:
```
___________________ LocalMetricTest.test_load_metric_meteor ____________________
[gw1] linux -- Python 3.6.15 /home/circleci/.pyenv/versions/3.6.15/bin/python3.6
self = <tests.test_metric_common.LocalMetricTest testMethod=test_load_metric_meteor>
metric_name = 'meteor'
def test_load_metric(self, metric_name):
doctest.ELLIPSIS_MARKER = "[...]"
metric_module = importlib.import_module(datasets.load.prepare_module(os.path.join("metrics", metric_name))[0])
metric = datasets.load.import_main_class(metric_module.__name__, dataset=False)
# check parameters
parameters = inspect.signature(metric._compute).parameters
self.assertTrue("predictions" in parameters)
self.assertTrue("references" in parameters)
self.assertTrue(all([p.kind != p.VAR_KEYWORD for p in parameters.values()])) # no **kwargs
# run doctest
with self.patch_intensive_calls(metric_name, metric_module.__name__):
with self.use_local_metrics():
> results = doctest.testmod(metric_module, verbose=True, raise_on_error=True)
tests/test_metric_common.py:75:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
../.pyenv/versions/3.6.15/lib/python3.6/doctest.py:1951: in testmod
runner.run(test)
../.pyenv/versions/3.6.15/lib/python3.6/doctest.py:1839: in run
r = DocTestRunner.run(self, test, compileflags, out, False)
../.pyenv/versions/3.6.15/lib/python3.6/doctest.py:1476: in run
return self.__run(test, compileflags, out)
../.pyenv/versions/3.6.15/lib/python3.6/doctest.py:1382: in __run
exception)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <doctest.DebugRunner object at 0x7f4c26bd3da0>
out = <built-in method write of _io.TextIOWrapper object at 0x7f51a21852d0>
test = <DocTest datasets_modules.datasets.meteor.6201bb45d2c144ea7963680949d20f523d74a741fa0f8a806f836e6caa5245d7.meteor.Mete...ets_modules/datasets/meteor/6201bb45d2c144ea7963680949d20f523d74a741fa0f8a806f836e6caa5245d7/meteor.py:87 (5 examples)>
example = <doctest.Example object at 0x7f4c26bd3eb8>
exc_info = (<class 'TypeError'>, TypeError('"hypothesis" expects pre-tokenized hypothesis (Iterable[str]): It is a guide to action which ensures that the military always obeys the commands of the party',), <traceback object at 0x7f4cd01afec8>)
def report_unexpected_exception(self, out, test, example, exc_info):
> raise UnexpectedException(test, example, exc_info)
E doctest.UnexpectedException: <DocTest datasets_modules.datasets.meteor.6201bb45d2c144ea7963680949d20f523d74a741fa0f8a806f836e6caa5245d7.meteor.Meteor from /tmp/pytest-of-circleci/pytest-0/popen-gw1/cache/modules/datasets_modules/datasets/meteor/6201bb45d2c144ea7963680949d20f523d74a741fa0f8a806f836e6caa5245d7/meteor.py:87 (5 examples)>
../.pyenv/versions/3.6.15/lib/python3.6/doctest.py:1845: UnexpectedException
```
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https://api.github.com/repos/huggingface/datasets/issues/3054 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3054/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3054/comments | https://api.github.com/repos/huggingface/datasets/issues/3054/events | https://github.com/huggingface/datasets/pull/3054 | 1,022,108,186 | PR_kwDODunzps4s_TmE | 3,054 | Update Biosses | {
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https://api.github.com/repos/huggingface/datasets/issues/3053 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3053/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3053/comments | https://api.github.com/repos/huggingface/datasets/issues/3053/events | https://github.com/huggingface/datasets/issues/3053 | 1,022,076,905 | I_kwDODunzps4866fp | 3,053 | load_dataset('the_pile_openwebtext2') produces ArrowInvalid, value too large to fit in C integer type | {
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"I encountered the same bug using different datasets.\r\nany suggestions?",
"+1, can reproduce here!",
"I get the same error\r\nPlatform: Windows 10\r\nPython: python 3.8.8\r\nPyArrow: 5.0",
"I was getting a similar error `pyarrow.lib.ArrowInvalid: Integer value 528 not in range: -128 to 127` - AFAICT, this is because the type specified for `reddit_scores` is `datasets.Sequence(datasets.Value(\"int8\"))`, but the actual values can be well outside the max range for 8-bit integers.\r\n\r\nI worked around this by downloading the `the_pile_openwebtext2.py` and editing it to use local files and drop reddit scores as a column (not needed for my purposes).",
"Addressed in https://huggingface.co/datasets/the_pile_openwebtext2/discussions/4"
] | 1,633,895,721,000 | 1,677,247,340,000 | 1,677,247,340,000 | NONE | null | null | null | ## Describe the bug
When loading `the_pile_openwebtext2`, we get the error `pyarrow.lib.ArrowInvalid: Value 2111 too large to fit in C integer type`
## Steps to reproduce the bug
```python
import datasets
ds = datasets.load_dataset('the_pile_openwebtext2')
```
## Expected results
Should download the dataset, convert it to an arrow file, and return a working Dataset object.
## Actual results
The download works, but conversion to the arrow file fails as follows:
```
>>> ds = datasets.load_dataset('the_pile_openwebtext2')
Downloading and preparing dataset openwebtext2/plain_text (download: 27.33 GiB, generated: 63.86 GiB
, post-processed: Unknown size, total: 91.19 GiB) to /home/davidbau/.cache/huggingface/datasets/open
webtext2/plain_text/1.0.0/c48ec73ba3483bac673463f48f67e9a4fd8cb49a9d6ec4fb957f0b424b97cf25...
Traceback (most recent call last):
File "/home/davidbau/.conda/envs/tenv/lib/python3.9/site-packages/datasets/builder.py", line 1133,
in _prepare_split
writer.write(example, key)
File "/home/davidbau/.conda/envs/tenv/lib/python3.9/site-packages/datasets/arrow_writer.py", line
366, in write
self.write_examples_on_file()
File "/home/davidbau/.conda/envs/tenv/lib/python3.9/site-packages/datasets/arrow_writer.py", line
311, in write_examples_on_file
pa_array = pa.array(typed_sequence)
File "pyarrow/array.pxi", line 222, in pyarrow.lib.array
File "pyarrow/array.pxi", line 110, in pyarrow.lib._handle_arrow_array_protocol
File "/home/davidbau/.conda/envs/tenv/lib/python3.9/site-packages/datasets/arrow_writer.py", line
115, in __arrow_array__
out = pa.array(cast_to_python_objects(self.data, only_1d_for_numpy=True), type=type)
File "pyarrow/array.pxi", line 305, in pyarrow.lib.array
File "pyarrow/array.pxi", line 39, in pyarrow.lib._sequence_to_array
File "pyarrow/error.pxi", line 122, in pyarrow.lib.pyarrow_internal_check_status
File "pyarrow/error.pxi", line 84, in pyarrow.lib.check_status
pyarrow.lib.ArrowInvalid: Value 2111 too large to fit in C integer type
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version:
```
- Platform: Ubuntu 20.04
- Python version: python 3.9
- PyArrow version: 3.0.0
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https://api.github.com/repos/huggingface/datasets/issues/3052 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3052/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3052/comments | https://api.github.com/repos/huggingface/datasets/issues/3052/events | https://github.com/huggingface/datasets/issues/3052 | 1,021,944,435 | I_kwDODunzps486aJz | 3,052 | load_dataset cannot download the data and hangs on forever if cache dir specified | {
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"Issue was environment inconsistency, updating packages did the trick\r\n\r\n`conda install -c huggingface -c conda-forge datasets`\r\n\r\n> Collecting package metadata (current_repodata.json): done\r\n> Solving environment: |\r\n> The environment is inconsistent, please check the package plan carefully\r\n> The following packages are causing the inconsistency:\r\n> \r\n> - conda-forge/noarch::datasets==1.12.1=pyhd8ed1ab_1\r\n> - conda-forge/win-64::multiprocess==0.70.12.2=py38h294d835_0\r\n> done\r\n> \r\n> Package Plan\r\n> \r\n> environment location: C:\\xxx\\anaconda3\\envs\\UnBias-94-1\r\n> \r\n> added / updated specs:\r\n> - datasets\r\n> \r\n> \r\n> The following NEW packages will be INSTALLED:\r\n> \r\n> dill conda-forge/noarch::dill-0.3.4-pyhd8ed1ab_0\r\n> \r\n> The following packages will be UPDATED:\r\n> \r\n> ca-certificates pkgs/main::ca-certificates-2021.9.30-~ --> conda-forge::ca-certificates-2021.10.8-h5b45459_0\r\n> certifi pkgs/main::certifi-2021.5.30-py38haa9~ --> conda-forge::certifi-2021.10.8-py38haa244fe_0\r\n> \r\n> The following packages will be SUPERSEDED by a higher-priority channel:\r\n> "
] | 1,633,861,896,000 | 1,633,949,829,000 | 1,633,949,796,000 | NONE | null | null | null | ## Describe the bug
After updating datasets, a code that ran just fine for ages began to fail. Specifying _datasets.load_dataset_'s _cache_dir_ optional argument on Windows 10 machine results in data download to hang on forever. Same call without cache_dir works just fine. Surprisingly exact same code just runs perfectly fine on Linux docker instance running in cloud.
Unfortunately I updated Windows also at the same time and I can't remember which version of datasets was running in my conda environment prior to the update otherwise I would have tried both to check this out. :(
## Steps to reproduce the bug
```python
# Sample code to reproduce the bug
```
cache_dir = 'c:/data/datasets'
dataset = load_dataset('wikipedia', '20200501.en', split='train',cache_dir=cache_dir)
```
Note that exact same code without specifying _cache_dir_ argument works perfectly fine.
```
cache_dir = 'c:/data/datasets'
dataset = load_dataset('wikipedia', '20200501.en', split='train')
```
## Expected results
Downloads the dataset and cache is handled in the _cache_dir_ directory
## Actual results
Data download keeps hanging on forever, **NO TRACEBACK**!
## Environment info
- `datasets` version: 1.12.1
- Platform: Windows-10-10.0.19042-SP0
- Python version: 3.8.11
- PyArrow version: 3.0.0
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https://api.github.com/repos/huggingface/datasets/issues/3051 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3051/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3051/comments | https://api.github.com/repos/huggingface/datasets/issues/3051/events | https://github.com/huggingface/datasets/issues/3051 | 1,021,852,234 | I_kwDODunzps486DpK | 3,051 | Non-Matching Checksum Error with crd3 dataset | {
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"I got the same error for another dataset (`multi_woz_v22`):\r\n\r\n```\r\ndatasets.utils.info_utils.NonMatchingChecksumError: Checksums didn't match for dataset source files:\r\n['https://github.com/budzianowski/multiwoz/raw/master/data/MultiWOZ_2.2/dialog_acts.json', 'https://github.com/budzianowski/multiwoz/raw/master/data/MultiWOZ_2.2/test/dialogues_001.json']\r\n```",
"I'm seeing the same issue as @RylanSchaeffer:\r\nPython 3.7.11, macOs 11.4\r\ndatasets==1.14.0\r\n\r\nfails on:\r\n```python\r\ndataset = datasets.load_dataset(\"multi_woz_v22\")\r\n```"
] | 1,633,829,563,000 | 1,647,359,666,000 | 1,647,359,666,000 | NONE | null | null | null | ## Describe the bug
When I try loading the crd3 dataset (https://huggingface.co/datasets/crd3), an error is thrown.
## Steps to reproduce the bug
```python
dataset = load_dataset('crd3', split='train')
```
## Expected results
I expect no error to be thrown.
## Actual results
A non-matching checksum error is thrown.
```
datasets.utils.info_utils.NonMatchingChecksumError: Checksums didn't match for dataset source files:
['https://github.com/RevanthRameshkumar/CRD3/archive/master.zip']
```
## Environment info
- `datasets` version: 1.12.1
- Platform: Linux-4.4.0-173-generic-x86_64-with-Ubuntu-16.04-xenial
- Python version: 3.6.10
- PyArrow version: 5.0.0
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"I'm running a large test.\r\nLet's see if I get any error within a few days.",
"This time it stopped after 8h but correctly raised `ConnectionError: Server Disconnected`.\r\n\r\nTraceback:\r\n```\r\nTraceback (most recent call last): \r\n File \"/home/koush/dalle-mini/dev/seq2seq/run_seq2seq_flax.py\", line 1027, in <module> \r\n main() \r\n File \"/home/koush/dalle-mini/dev/seq2seq/run_seq2seq_flax.py\", line 991, in main \r\n for batch in tqdm( \r\n File \"/home/koush/.pyenv/versions/dev/lib/python3.9/site-packages/tqdm/std.py\", line 1180, in __iter__ \r\n for obj in iterable: \r\n File \"/home/koush/dalle-mini/dev/seq2seq/run_seq2seq_flax.py\", line 376, in data_loader_streaming\r\n for item in dataset:\r\n File \"/home/koush/datasets/src/datasets/iterable_dataset.py\", line 341, in __iter__\r\n for key, example in self._iter():\r\n File \"/home/koush/datasets/src/datasets/iterable_dataset.py\", line 338, in _iter\r\n yield from ex_iterable\r\n File \"/home/koush/datasets/src/datasets/iterable_dataset.py\", line 179, in __iter__\r\n key_examples_list = [(key, example)] + [\r\n File \"/home/koush/datasets/src/datasets/iterable_dataset.py\", line 179, in <listcomp>\r\n key_examples_list = [(key, example)] + [\r\n File \"/home/koush/datasets/src/datasets/iterable_dataset.py\", line 176, in __iter__\r\n for key, example in iterator:\r\n File \"/home/koush/datasets/src/datasets/iterable_dataset.py\", line 225, in __iter__\r\n for x in self.ex_iterable:\r\n File \"/home/koush/datasets/src/datasets/iterable_dataset.py\", line 99, in __iter__\r\n for key, example in self.generate_examples_fn(**kwargs_with_shuffled_shards):\r\n File \"/home/koush/datasets/src/datasets/iterable_dataset.py\", line 287, in wrapper\r\n for key, table in generate_tables_fn(**kwargs):\r\n File \"/home/koush/datasets/src/datasets/packaged_modules/json/json.py\", line 107, in _generate_tables\r\n batch = f.read(self.config.chunksize)\r\n File \"/home/koush/datasets/src/datasets/utils/streaming_download_manager.py\", line 136, in read_with_retries\r\n raise ConnectionError(\"Server Disconnected\")\r\nConnectionError: Server Disconnected\r\n```\r\n\r\nRight before this error, the warnings were correctly raised:\r\n\r\n```\r\n10/10/2021 06:02:26 - WARNING - datasets.utils.streaming_download_manager - Got disconnected from remote data host. Retrying in 1sec [1/3]\r\n10/10/2021 06:02:27 - WARNING - datasets.utils.streaming_download_manager - Got disconnected from remote data host. Retrying in 1sec [2/3] \r\n10/10/2021 06:02:28 - WARNING - datasets.utils.streaming_download_manager - Got disconnected from remote data host. Retrying in 1sec [3/3\r\n```\r\n\r\nI'm going to see what happens if I change the max retries to 20 and the interval to 5.",
"Also maybe we can raise the Server Disconnected error with more info about what kind of error caused it (client error, time out, etc.)",
"I have 2 runs:\r\n* [run 1](https://wandb.ai/dalle-mini/dalle-mini/runs/1nj161cl?workspace=user-borisd13) with [this data](https://huggingface.co/datasets/dalle-mini/encoded) that I will remove soon because I now use the 2nd one\r\n* [run 2](https://wandb.ai/dalle-mini/dalle-mini/runs/he9rrc3q?workspace=user-borisd13) with [this data](https://huggingface.co/datasets/dalle-mini/encoded-vqgan_imagenet_f16_16384)\r\n* `load_dataset(dataset_repo, data_files={'train':'data/train/*.jsonl', 'validation':'data/valid/*.jsonl'}, streaming=True)`\r\n\r\nThey have now been running by a bit more than a day for one run and 15h for the other.\r\n\r\nThe error logs are not shown in wandb because the script use `pylogging` (not sure why, I should change it) but basically so far with the new settings I had one timeout in each with successful reconnect afterwards.\r\n\r\nSo I think it's a good idea to have:\r\n* `STREAMING_READ_RETRY_INTERVAL = 5` since before my runs would get 3 errors in a row (with the default 1 second pause)\r\n* `STREAMING_READ_MAX_RETRIES` should also be increased. Since this type of error does not happen a lot, I would still have a large number (at least 10) because a stopped training run may be a big issue if checkpointing/restart is not well implemented which is not always trivial",
"I agree ! Feel free to open a PR to increase both values"
] | 1,633,803,560,000 | 1,634,052,498,000 | 1,633,944,938,000 | CONTRIBUTOR | null | false | {
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} | Catches Timeout error during streaming.
fix #3049 | {
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https://api.github.com/repos/huggingface/datasets/issues/3049 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3049/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3049/comments | https://api.github.com/repos/huggingface/datasets/issues/3049/events | https://github.com/huggingface/datasets/issues/3049 | 1,021,770,008 | I_kwDODunzps485vkY | 3,049 | TimeoutError during streaming | {
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] | closed | false | null | [] | null | [] | 1,633,802,811,000 | 1,633,944,938,000 | 1,633,944,938,000 | CONTRIBUTOR | null | null | null | ## Describe the bug
I got a TimeoutError after streaming for about 10h.
## Steps to reproduce the bug
Very long code but we could do a test of streaming indefinitely data, though error may take a while to appear.
## Expected results
This error was not expected in the code which considers only `ClientError` but not `TimeoutError`.
See [this line](https://github.com/huggingface/datasets/blob/2814fbd0e18150be409f10804670e98d9ecb87d4/src/datasets/utils/streaming_download_manager.py#L129).
Based on the traceback, it looks like the `TimeoutError` was not captured.
## Actual results
```
File "/home/koush/.pyenv/versions/dev/lib/python3.9/site-packages/fsspec/asyn.py", line 25, in _runner
result[0] = await coro
File "/home/koush/.pyenv/versions/dev/lib/python3.9/site-packages/fsspec/implementations/http.py", line 614, in async_fetch_range
out = await r.read()
File "/home/koush/.pyenv/versions/dev/lib/python3.9/site-packages/aiohttp/client_reqrep.py", line 1032, in read
self._body = await self.content.read()
File "/home/koush/.pyenv/versions/dev/lib/python3.9/site-packages/aiohttp/streams.py", line 370, in read
block = await self.readany()
File "/home/koush/.pyenv/versions/dev/lib/python3.9/site-packages/aiohttp/streams.py", line 392, in readany
await self._wait("readany")
File "/home/koush/.pyenv/versions/dev/lib/python3.9/site-packages/aiohttp/streams.py", line 306, in _wait
await waiter
File "/home/koush/.pyenv/versions/dev/lib/python3.9/site-packages/aiohttp/helpers.py", line 656, in __exit__
raise asyncio.TimeoutError from None
asyncio.exceptions.TimeoutError
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "/home/koush/dalle-mini/dev/seq2seq/run_seq2seq_flax.py", line 1027, in <module>
main()
File "/home/koush/dalle-mini/dev/seq2seq/run_seq2seq_flax.py", line 991, in main
for batch in tqdm(
File "/home/koush/.pyenv/versions/dev/lib/python3.9/site-packages/tqdm/std.py", line 1180, in __iter__
for obj in iterable:
File "/home/koush/dalle-mini/dev/seq2seq/run_seq2seq_flax.py", line 376, in data_loader_streaming
for item in dataset:
File "/home/koush/datasets/src/datasets/iterable_dataset.py", line 341, in __iter__
for key, example in self._iter():
File "/home/koush/datasets/src/datasets/iterable_dataset.py", line 338, in _iter
yield from ex_iterable
File "/home/koush/datasets/src/datasets/iterable_dataset.py", line 179, in __iter__
key_examples_list = [(key, example)] + [
File "/home/koush/datasets/src/datasets/iterable_dataset.py", line 179, in <listcomp>
key_examples_list = [(key, example)] + [
File "/home/koush/datasets/src/datasets/iterable_dataset.py", line 176, in __iter__
for key, example in iterator:
File "/home/koush/datasets/src/datasets/iterable_dataset.py", line 225, in __iter__
for x in self.ex_iterable:
File "/home/koush/datasets/src/datasets/iterable_dataset.py", line 99, in __iter__
for key, example in self.generate_examples_fn(**kwargs_with_shuffled_shards):
File "/home/koush/datasets/src/datasets/iterable_dataset.py", line 287, in wrapper
for key, table in generate_tables_fn(**kwargs):
File "/home/koush/datasets/src/datasets/packaged_modules/json/json.py", line 107, in _generate_tables
batch = f.read(self.config.chunksize)
File "/home/koush/datasets/src/datasets/utils/streaming_download_manager.py", line 126, in read_with_retries
out = read(*args, **kwargs)
File "/home/koush/.pyenv/versions/dev/lib/python3.9/site-packages/fsspec/implementations/http.py", line 572, in read
return super().read(length)
File "/home/koush/.pyenv/versions/dev/lib/python3.9/site-packages/fsspec/spec.py", line 1533, in read
out = self.cache._fetch(self.loc, self.loc + length)
File "/home/koush/.pyenv/versions/dev/lib/python3.9/site-packages/fsspec/caching.py", line 390, in _fetch
self.cache = self.fetcher(start, bend)
File "/home/koush/.pyenv/versions/dev/lib/python3.9/site-packages/fsspec/asyn.py", line 91, in wrapper
return sync(self.loop, func, *args, **kwargs)
File "/home/koush/.pyenv/versions/dev/lib/python3.9/site-packages/fsspec/asyn.py", line 69, in sync
raise FSTimeoutError from return_result
fsspec.exceptions.FSTimeoutError
```
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.12.2.dev0
- Platform: Linux-5.4.0-1043-gcp-x86_64-with-glibc2.31
- Python version: 3.9.7
- PyArrow version: 5.0.0
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https://api.github.com/repos/huggingface/datasets/issues/3048 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3048/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3048/comments | https://api.github.com/repos/huggingface/datasets/issues/3048/events | https://github.com/huggingface/datasets/issues/3048 | 1,021,765,661 | I_kwDODunzps485ugd | 3,048 | Identify which shard data belongs to | {
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"Independently of this I think it raises the need to allow multiprocessing during streaming so that we get samples from multiple shards in one batch."
] | 1,633,801,595,000 | 1,633,811,057,000 | null | CONTRIBUTOR | null | null | null | **Is your feature request related to a problem? Please describe.**
I'm training on a large dataset made of multiple sub-datasets.
During training I can observe some jumps in loss which may correspond to different shards.
![image](https://user-images.githubusercontent.com/715491/136668758-521263aa-a9b2-4ad2-8d22-060b6bf86a1c.png)
My suspicion is that either:
* some of the sub-datasets are harder for the model than others
* some of the sub-datasets are not formatted properly
I'd like to identify which shards correspond to those jumps.
**Describe the solution you'd like**
It would be nice to have a key associated to each data sample or data batch containing details on where the data comes from (shard idx + item idx within the shard).
This should be supported both in local and streaming mode.
**Describe alternatives you've considered**
A fix would be for me to add myself details (shard id, sample id) as part of each data sample.
The inconvenient is that it requires users to process/reupload every dataset when they need this feature. | {
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https://api.github.com/repos/huggingface/datasets/issues/3047 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3047/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3047/comments | https://api.github.com/repos/huggingface/datasets/issues/3047/events | https://github.com/huggingface/datasets/issues/3047 | 1,021,360,616 | I_kwDODunzps484Lno | 3,047 | Loading from cache a dataset for LM built from a text classification dataset sometimes errors | {
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"This has been fixed in 1.15, let me know if you still have this issue"
] | 1,633,717,391,000 | 1,635,959,588,000 | 1,635,959,588,000 | CONTRIBUTOR | null | null | null | ## Describe the bug
Yes, I know, that description sucks. So the problem is arising in the course when we build a masked language modeling dataset using the IMDB dataset. To reproduce (or try since it's a bit fickle).
Create a dataset for masled-language modeling from the IMDB dataset.
```python
from datasets import load_dataset
from transformers import Autotokenizer
tokenizer = AutoTokenizer.from_pretrained("distilbert-base-cased)
imdb_dataset = load_dataset("imdb", split="train")
def tokenize_function(examples):
return tokenizer(examples["text"])
tokenized_dataset = imdb_dataset.map(
tokenize_function, batched=True, remove_columns=["text", "label"]
)
chunk_size = 128
def group_texts(examples):
# Concatenate all texts.
concatenated_examples = {k: sum(examples[k], []) for k in examples.keys()}
# Compute length of concatenated texts
total_length = len(concatenated_examples[list(examples.keys())[0]])
# We drop the last chunk if it's smaller than chunk_size
total_length = (total_length // chunk_size) * chunk_size
# Split by chunks of max_len.
result = {
k: [t[i : i + chunk_size] for i in range(0, total_length, chunk_size)]
for k, t in concatenated_examples.items()
}
# Create a new labels column
result["labels"] = result["input_ids"].copy()
return result
lm_dataset = tokenized_dataset.map(group_texts, batched=True)
```
Until now, all is well. The problem comes when you re-execute that code, more specifically:
```python
tokenized_dataset = imdb_dataset.map(
tokenize_function, batched=True, remove_columns=["text", "label"]
)
lm_dataset = tokenized_dataset.map(group_texts, batched=True)
```
Try several times if the bug doesn't appear instantly, or just each line at a time, ideally in a notebook/Colab and you should get at some point:
```python
---------------------------------------------------------------------------
KeyError Traceback (most recent call last)
<ipython-input-40-357a56ee3d53> in <module>
----> 1 lm_dataset = tokenized_dataset.map(group_texts, batched=True)
~/git/datasets/src/datasets/arrow_dataset.py in map(self, function, with_indices, input_columns, batched, batch_size, drop_last_batch, remove_columns, keep_in_memory, load_from_cache_file, cache_file_name, writer_batch_size, features, disable_nullable, fn_kwargs, num_proc, suffix_template, new_fingerprint, desc)
1947 new_fingerprint=new_fingerprint,
1948 disable_tqdm=disable_tqdm,
-> 1949 desc=desc,
1950 )
1951 else:
~/git/datasets/src/datasets/arrow_dataset.py in wrapper(*args, **kwargs)
424 }
425 # apply actual function
--> 426 out: Union["Dataset", "DatasetDict"] = func(self, *args, **kwargs)
427 datasets: List["Dataset"] = list(out.values()) if isinstance(out, dict) else [out]
428 # re-apply format to the output
~/git/datasets/src/datasets/fingerprint.py in wrapper(*args, **kwargs)
404 # Call actual function
405
--> 406 out = func(self, *args, **kwargs)
407
408 # Update fingerprint of in-place transforms + update in-place history of transforms
~/git/datasets/src/datasets/arrow_dataset.py in _map_single(self, function, with_indices, input_columns, batched, batch_size, drop_last_batch, remove_columns, keep_in_memory, load_from_cache_file, cache_file_name, writer_batch_size, features, disable_nullable, fn_kwargs, new_fingerprint, rank, offset, disable_tqdm, desc, cache_only)
2138 if os.path.exists(cache_file_name) and load_from_cache_file:
2139 logger.warning("Loading cached processed dataset at %s", cache_file_name)
-> 2140 info = self.info.copy()
2141 info.features = features
2142 return Dataset.from_file(cache_file_name, info=info, split=self.split)
~/git/datasets/src/datasets/info.py in copy(self)
278
279 def copy(self) -> "DatasetInfo":
--> 280 return self.__class__(**{k: copy.deepcopy(v) for k, v in self.__dict__.items()})
281
282
~/git/datasets/src/datasets/info.py in __init__(self, description, citation, homepage, license, features, post_processed, supervised_keys, task_templates, builder_name, config_name, version, splits, download_checksums, download_size, post_processing_size, dataset_size, size_in_bytes)
~/git/datasets/src/datasets/info.py in __post_init__(self)
177 for idx, template in enumerate(self.task_templates):
178 if isinstance(template, TextClassification):
--> 179 labels = self.features[template.label_column].names
180 self.task_templates[idx] = TextClassification(
181 text_column=template.text_column, label_column=template.label_column, labels=labels
KeyError: 'label'
```
It seems that when loading the cache, the dataset tries to access some kind of text classification template (which I imagine comes from the original dataset) and to look at a key that has since been removed. | {
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"Hi ! Thanks for noticing this inconsistence and suggesting a fix :)\r\n\r\nIf I understand correctly you try to pass the same fingerprint to each processed shard of the dataset. This can be an issue since each shard is actually a different dataset with different data: they shouldn't have the same fingerprint.\r\n\r\nIdeally we want the result after `map` to have this fingerprint. The result after `map` is the concatenation of all the processed shards. In this case what we can do is add the `fingerprint` parameter to `concatenate_datasets` to overwrite the fingerprint here if needed:\r\nhttps://github.com/huggingface/datasets/blob/03b7f123cc17afc517c0aa2f912bbd90cb266185/src/datasets/arrow_dataset.py#L3588-L3590\r\n\r\nthen you can pass the fingerprint to `concatenate_datasets` here:\r\nhttps://github.com/huggingface/datasets/blob/03b7f123cc17afc517c0aa2f912bbd90cb266185/src/datasets/arrow_dataset.py#L2044-L2044",
"Hi @lhoestq, thanks for the pointers! Not having a unique fingerprint per shard was indeed was indeed a problem. \r\n\r\nLet me look into this. I'll be back with a fix soon.",
"Alright, to clarify about my problem. I using am using `datasets` with large datasets, and want to cache a heavy and non-deterministically fingerprintable function (using `datasets.fingerprint.Hasher`). Using `Dataset.map()` as it is would cause generating a random fingerprint. To circumvent this, I am generating custom deterministic fingerprints, which I pass as an argument to `Dataset.map()`. In that way, a deterministic fingerprint is set, and caching can be used. \r\n\r\nThis approach works well when using `num_proc==1`, but not so well when using `num_proc>1`. In both cases, `dataset._fingerprint` is effectively set to `new_fingerprint` at the end of the `.map()` call. However, caching is not used when `num_proc>1`, a non deterministically fingerprintable function and `new_fingerprint != null. The reason is that caching operates within `Dataset._map_single` and `new_fingerprint` is not passed here. \r\n\r\nThis pull request implements a quick fix (+unit test) by passing `new_fingerprint=f\"{new_fingerprint}-part{rank+1}-{num_proc}\"` to each `_map_single` call. Using a separate name for each call makes sure that each worker uses a different cache file (as you mentioned above).\r\n\r\nHowever, this solution still means that using a different value for `num_proc` will require computing new partial cache files. In the long run, performing the caching within `map()` instead of within `_map_single()` would be a cleaner solution.",
"Hi @vlievin,\r\n\r\nIf I understand your example correctly, you are trying to use the `new_fingerprint` param to have a deterministic fingerprint of the transform, which is not hashable due to randomness. Any particular reason why you are not using the `cache_file_name` param instead? I did run your example with the `cache_file_name` specified, and it behaves as expected based on the logs. Internally, `new_fingerprint` is needed to inject the calculated fingerprint into a method by the `fingerprint_transform` decorator, which is then used to compute the cache file name in `Dataset._get_cache_file_path` if the user hasn't specified one. ",
"Hi @lhoestq, I have cleaned up the unit test (incl. styling). It should be ready to merge as such. I am using this branch in my project and everything works fine. \r\n\r\nHi @mariosasko, the argument `new_fingerprint` allowed me to deterministically cache my transformation when using `num_proc=1`, so I assumed that was the right way to go. But maybe I have misinterpreted how `new_fingerprint` should be used.\r\n\r\nBut in any case, `map()` should perform consistently with regards to `num_proc`. In my opinion, the behaviour of `Dataset.map()` should perform the same, and this without requiring the user to input `cache_file_name` when `num_proc>1` is set.\r\nBut maybe there is a more elegant way to fix this using `cache_file_name` internally for each `_single_map()` call.\r\n\r\nSo, I think this is a more high level design decision and I will leave it to the maintainers :) ",
"Hi @vlievin,\r\n\r\nI appreciate your effort, but `new_fingerprint` behaves as described in the `Dataset.map` docs, and we don't have to follow some artificial consistency in regards to `num_proc`:\r\nhttps://github.com/huggingface/datasets/blob/adc5cec58dd15ee672016086fefdea34b3143e4f/src/datasets/arrow_dataset.py#L1962-L1963\r\n\r\nAdditionally, to compute the cache file name, you are using a private method (`dset._get_cache_file_path(new_fingerprint)`); prefixed with `_`), so this is a sign you may be doing something wrong because you are relying on the internals. I suggest you use cache_file_name instead and follow the suffix template docs, which explain how to compute file paths of the created cache files when `num_proc > 1`.",
"Hi @mariosasko, thanks for the pointer regarding the use of the private method in then unit tests. \r\n\r\nYes, `new_fingerprint` behaves as documented. If you don't think this is an issue, feel free to close this pull request. \r\n",
"Allowing the users to pass the fingerprint themselves for functions that can't be hashed would be a nice improvements. However I agree that as @mariosasko mentioned this is currently not how we want the API to behave for now - since it has to do with the internals of the library.\r\n\r\nThough we can discuss what could be the right way of doing it in https://github.com/huggingface/datasets/issues/3044 if you don't mind !"
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} | Fix #3044
1. A rough unit test that fails without the fix. It probably doesn't comply with your code standards, but that just to draft the idea.
2. A one liner fix | {
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"Following the discussion in #3045 if would be nice to have a way to let users have a nice experience with caching even if the function is not hashable.\r\n\r\nCurrently a workaround is to make the function picklable. This can be done by implementing a callable class instead, that can be pickled using by implementing a custom `__getstate__` method for example.\r\n\r\nHowever it sounds pretty complicated for a simple thing. Maybe one idea would be to have something similar to streamlit: they allow users to register the hashing of their own objects.\r\n\r\nSee the documentation about their `hash_funcs` here: https://docs.streamlit.io/library/advanced-features/caching#the-hash_funcs-parameter\r\n\r\nHere is the example they give:\r\n\r\n```python\r\nclass FileReference:\r\n def __init__(self, filename):\r\n self.filename = filename\r\n\r\ndef hash_file_reference(file_reference):\r\n filename = file_reference.filename\r\n return (filename, os.path.getmtime(filename))\r\n\r\n@st.cache(hash_funcs={FileReference: hash_file_reference})\r\ndef func(file_reference):\r\n ...\r\n```",
"My solution was to generate a custom hash, and use the hash as a `new_fingerprint` argument to the `map()` method to enable caching. This works, but is quite hacky.\r\n\r\n@lhoestq, this approach is very neat, this would make the whole caching mechanic more explicit. I don't have so much time to look into this right now, but I might give it a try in the future. ",
"Almost a year later and I'm in a similar boat. Using custom fingerprints and when using multiprocessing the cached datasets are saved with a template at the end of the filename (something like \"000001_of_000008\" for every process of num_proc). So if in the next time you run the script you set num_proc to a different number, the cache cannot be used.\r\n\r\nIs there any way to get around this? I am processing a huge dataset so I do the processing on one machine and then transfer the processed data to another in its cache dir but currently that's not possible due to num_proc mismatch. "
] | 1,633,684,030,000 | 1,662,584,496,000 | null | NONE | null | null | null | ## Describe the bug
Caching does not work when using `Dataset.map()` with:
1. a function that cannot be deterministically fingerprinted
2. `num_proc>1`
3. using a custom fingerprint set with the argument `new_fingerprint`.
This means that the dataset will be mapped with the function for each and every call, which does not happen if `num_proc==1`. In that case (`num_proc==1`) subsequent calls will load the transformed dataset from the cache, which is the expected behaviour. The example can easily be translated into a unit test.
I have a fix and will submit a pull request asap.
## Steps to reproduce the bug
```python
import hashlib
import json
import os
from typing import Dict, Any
import numpy as np
from datasets import load_dataset, Dataset
Batch = Dict[str, Any]
filename = 'example.json'
class Transformation():
"""A transformation with a random state that cannot be fingerprinted"""
def __init__(self):
self.state = np.random.random()
def __call__(self, batch: Batch) -> Batch:
batch['x'] = [np.random.random() for _ in batch['x']]
return batch
def generate_dataset():
"""generate a simple dataset"""
rgn = np.random.RandomState(24)
data = {
'data': [{'x': float(y), 'y': -float(y)} for y in
rgn.random(size=(1000,))]}
if not os.path.exists(filename):
with open(filename, 'w') as f:
f.write(json.dumps(data))
return filename
def process_dataset_with_cache(num_proc=1, remove_cache=False,
cache_expected_to_exist=False):
# load the generated dataset
dset: Dataset = next(
iter(load_dataset('json', data_files=filename, field='data').values()))
new_fingerprint = hashlib.md5("static-id".encode("utf8")).hexdigest()
# get the expected cached path
cache_path = dset._get_cache_file_path(new_fingerprint)
if remove_cache and os.path.exists(cache_path):
os.remove(cache_path)
# check that the cache exists, and print a statement
# if was actually expected to exist
cache_exist = os.path.exists(cache_path)
print(f"> cache file exists={cache_exist}")
if cache_expected_to_exist and not cache_exist:
print("=== Cache does not exist! ====")
# apply the transformation with the new fingerprint
dset = dset.map(
Transformation(),
batched=True,
num_proc=num_proc,
new_fingerprint=new_fingerprint,
desc="mapping dataset with transformation")
generate_dataset()
for num_proc in [1, 2]:
print(f"# num_proc={num_proc}, first pass")
# first pass to generate the cache (always create a new cache here)
process_dataset_with_cache(remove_cache=True,
num_proc=num_proc,
cache_expected_to_exist=False)
print(f"# num_proc={num_proc}, second pass")
# second pass, expects the cache to exist
process_dataset_with_cache(remove_cache=False,
num_proc=num_proc,
cache_expected_to_exist=True)
os.remove(filename)
```
## Expected results
In the above python example, with `num_proc=2`, the **cache file should exist in the second call** of `process_dataset_with_cache` ("=== Cache does not exist! ====" should not be printed).
When the cache is successfully created, `map()` is called only one time.
## Actual results
In the above python example, with `num_proc=2`, the **cache does not exist in the second call** of `process_dataset_with_cache` (this results in printing "=== Cache does not exist! ====").
Because the cache doesn't exist, the `map()` method is executed a second time and the dataset is not loaded from the cache.
## Environment info
- `datasets` version: 1.12.1
- Platform: macOS-10.16-x86_64-i386-64bit
- Python version: 3.8.8
- PyArrow version: 5.0.0
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- **Name:** PASS
- **Description:** An ImageNet replacement for self-supervised pretraining without humans
- **Data:** https://www.robots.ox.ac.uk/~vgg/research/pass/ https://github.com/yukimasano/PASS
Instructions to add a new dataset can be found [here](https://github.com/huggingface/datasets/blob/master/ADD_NEW_DATASET.md).
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"@lhoestq @albertvillanova Iwas trying to fix the failing tests in circleCI but is there a test elasticsearch instance somewhere? If not, can I launch a docker container to have one?"
] | 1,633,613,315,000 | 1,657,120,788,000 | null | CONTRIBUTOR | null | false | {
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} | - adding murmurhash signature to sample in index
- adding optional credentials for remote elasticsearch server
- enabling sample update in index
- upgrade the elasticsearch 7.10.1 python client
- adding ElasticsearchBulider to instantiate a dataset from an index and a filtering query | {
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"I have an error on windows:\r\n```python\r\naiohttp.client_exceptions.ClientConnectorCertificateError: Cannot connect to host moon-staging.huggingface.co:443 ssl:True [SSLCertVerificationError: (1, '[SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: certificate has expired (_ssl.c:1131)')]\r\n```\r\nat the `fsspec` call in `xglob`:\r\n```python\r\nfs, *_ = fsspec.get_fs_token_paths(urlpath, storage_options=storage_options)\r\n```\r\n\r\nLooks like the windows CI has an SSL issue... ",
"I can reproduce it on my windows machine. On linux it works fine though",
"I'm just skipping the windows test for now",
"The Windows CI failure seems unrelated to this PR\r\n```python\r\nERROR tests/test_arrow_dataset.py::test_dummy_dataset_serialize_s3\r\n```"
] | 1,633,544,196,000 | 1,634,052,348,000 | 1,634,052,346,000 | MEMBER | null | false | {
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} | As mentioned in https://github.com/huggingface/datasets/issues/3032 loading data files from private repository isn't working correctly because of the data files resolved.
#2986 did a refactor of the data files resolver. I added authentication to it.
I also improved it to glob inside ZIP archives to look for json/csv/etc. files and infer which dataset builder (json/csv/etc.) to use.
Fix https://github.com/huggingface/datasets/issues/3032
Note that #2986 needs to get merged first | {
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"Hi,\r\n\r\nthe `save_to_disk` docstring explains that `flatten_indices` has to be called on a dataset before saving it to save only the shard/slice of the dataset.",
"That works! Thansk!\r\n\r\nMight be worth doing that automatically actually in case the `save_to_disk` is called on a dataset that has an indices mapping :-)",
"I agree with @patrickvonplaten: this issue is reported recurrently, so better if we implement the `.flatten_indices()` automatically?",
"That would be great indeed - I don't really see a use case where one would not like to call `.flatten_indices()` before calling `save_to_disk`",
"+1 on this !"
] | 1,633,540,127,000 | 1,635,867,668,000 | 1,635,867,668,000 | MEMBER | null | null | null | ## Describe the bug
When only keeping a dummy size of a dataset (say the first 100 samples), and then saving it to disk to upload it in the following to the hub for easy demo/use - not just the small dataset is saved but the whole dataset with an indices file. The problem with this is that the dataset is still very big.
## Steps to reproduce the bug
E.g. run the following:
```python
from datasets import load_dataset, save_to_disk
nlp = load_dataset("glue", "mnli", split="train")
nlp.save_to_disk("full")
nlp = nlp.select(range(100))
nlp.save_to_disk("dummy")
```
Now one can see that both `"dummy"` and `"full"` have the same size. This shouldn't be the case IMO.
## Expected results
IMO `"dummy"` should be much smaller so that one can easily play around with the dataset on the hub.
## Actual results
Specify the actual results or traceback.
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.12.2.dev0
- Platform: Linux-5.11.0-34-generic-x86_64-with-glibc2.10
- Python version: 3.8.5
- PyArrow version: 5.0.0
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https://api.github.com/repos/huggingface/datasets/issues/3036 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3036/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3036/comments | https://api.github.com/repos/huggingface/datasets/issues/3036/events | https://github.com/huggingface/datasets/issues/3036 | 1,017,687,944 | I_kwDODunzps48qK-I | 3,036 | Protect master branch to force contributions via Pull Requests | {
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"It would be nice to protect the master from direct commits, but still having a way to merge our own PRs when no review is required (for example when updating a dataset_infos.json file, or minor bug fixes - things that happen quite often actually).\r\nDo you know if there's a way ?",
"you can if you're an admin of the repo",
"This is done. Now the master branch is protected:\r\n- [x] Require a pull request before merging: all commits must be made to a non-protected branch and submitted via a pull request\r\n - Required number of approvals before merging: 1 \r\n- [x] Require linear history: prevent merge commits from being pushed\r\n- [x] These requirements are not enforced for administrators\r\n- [x] Additionally, the master branch is also protected against deletion and force pushes\r\n\r\nCC: @lhoestq @julien-c @thomwolf "
] | 1,633,505,657,000 | 1,633,589,507,000 | 1,633,589,392,000 | MEMBER | null | null | null | In order to have a clearer Git history in the master branch, I propose to protect it so that all contributions must be done through a Pull Request and no direct commits to master are allowed.
- The Pull Request allows to give context, discuss any potential issues and improve the quality of the contribution
- The Pull Request will eventually be squashed and merged into master with a single commit that links to the Pull Request page (with all the context/discussions)
Note that we already implemented a protection in the master branch to avoid *merge* commits and ensure a linear history. This proposal goes one step further by avoiding all kind of direct commits and forcing contributions **only** through Pull Requests.
Please note that we can temporarily deactivate this protection if we need to make a direct commit, e.g. at each new version release.
The only way GitHub allows this kind or protection is by requiring a minimal number (at least one) of approvals of the Pull Request. The inconvenient is that the PR creator cannot approve their own PR: another person must approve it before it can be merged into master. To circumvent this, we could eventually disable this protection in the master branch when an urgent commit is needed (e.g. for a hotfix) and there is no other person available at that time to approve the PR.
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https://api.github.com/repos/huggingface/datasets/issues/3035 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3035/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3035/comments | https://api.github.com/repos/huggingface/datasets/issues/3035/events | https://github.com/huggingface/datasets/issues/3035 | 1,016,770,071 | I_kwDODunzps48mq4X | 3,035 | `load_dataset` does not work with uploaded arrow file | {
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"Hi ! This is not a bug, this is simply not implemented.\r\n`save_to_disk` is for on-disk serialization and was not made compatible for the Hub.\r\nThat being said, I agree we actually should make it work with the Hub x)",
"cc @LysandreJik maybe we can solve this at the same time as adding `push_to_hub`"
] | 1,633,464,910,000 | 1,633,539,697,000 | null | MEMBER | null | null | null | ## Describe the bug
I've preprocessed and uploaded a dataset here: https://huggingface.co/datasets/ami-wav2vec2/ami_headset_single_preprocessed . The dataset is in `.arrow` format.
The dataset can correctly be loaded when doing:
```bash
git lfs install
git clone https://huggingface.co/datasets/ami-wav2vec2/ami_headset_single_preprocessed
```
followed by
```python
from datasets import load_from_disk
ds = load_from_disk("./ami_headset_single_preprocessed")
```
However when I try to directly download the dataset as follows:
```python
from datasets import load_dataset
ds = load_dataset("ami-wav2vec2/ami_headset_single_preprocessed")
```
the following error occurs:
```bash
/usr/local/lib/python3.7/dist-packages/datasets/load.py in load_dataset(path, name, data_dir, data_files, split, cache_dir, features, download_config, download_mode, ignore_verifications, keep_in_memory, save_infos, script_version, use_auth_token, task, streaming, **config_kwargs)
1115 ignore_verifications=ignore_verifications,
1116 try_from_hf_gcs=try_from_hf_gcs,
-> 1117 use_auth_token=use_auth_token,
1118 )
1119
/usr/local/lib/python3.7/dist-packages/datasets/builder.py in download_and_prepare(self, download_config, download_mode, ignore_verifications, try_from_hf_gcs, dl_manager, base_path, use_auth_token, **download_and_prepare_kwargs)
635 if not downloaded_from_gcs:
636 self._download_and_prepare(
--> 637 dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
638 )
639 # Sync info
/usr/local/lib/python3.7/dist-packages/datasets/builder.py in _download_and_prepare(self, dl_manager, verify_infos, **prepare_split_kwargs)
724 try:
725 # Prepare split will record examples associated to the split
--> 726 self._prepare_split(split_generator, **prepare_split_kwargs)
727 except OSError as e:
728 raise OSError(
/usr/local/lib/python3.7/dist-packages/datasets/builder.py in _prepare_split(self, split_generator)
1186 generator, unit=" tables", leave=False, disable=bool(logging.get_verbosity() == logging.NOTSET)
1187 ):
-> 1188 writer.write_table(table)
1189 num_examples, num_bytes = writer.finalize()
1190
/usr/local/lib/python3.7/dist-packages/datasets/arrow_writer.py in write_table(self, pa_table, writer_batch_size)
424 # reorder the arrays if necessary + cast to self._schema
425 # we can't simply use .cast here because we may need to change the order of the columns
--> 426 pa_table = pa.Table.from_arrays([pa_table[name] for name in self._schema.names], schema=self._schema)
427 batches: List[pa.RecordBatch] = pa_table.to_batches(max_chunksize=writer_batch_size)
428 self._num_bytes += sum(batch.nbytes for batch in batches)
/usr/local/lib/python3.7/dist-packages/pyarrow/table.pxi in pyarrow.lib.Table.from_arrays()
/usr/local/lib/python3.7/dist-packages/pyarrow/table.pxi in pyarrow.lib._sanitize_arrays()
/usr/local/lib/python3.7/dist-packages/pyarrow/array.pxi in pyarrow.lib.asarray()
/usr/local/lib/python3.7/dist-packages/pyarrow/table.pxi in pyarrow.lib.ChunkedArray.cast()
/usr/local/lib/python3.7/dist-packages/pyarrow/compute.py in cast(arr, target_type, safe)
279 else:
280 options = CastOptions.unsafe(target_type)
--> 281 return call_function("cast", [arr], options)
282
283
/usr/local/lib/python3.7/dist-packages/pyarrow/_compute.pyx in pyarrow._compute.call_function()
/usr/local/lib/python3.7/dist-packages/pyarrow/_compute.pyx in pyarrow._compute.Function.call()
/usr/local/lib/python3.7/dist-packages/pyarrow/error.pxi in pyarrow.lib.pyarrow_internal_check_status()
/usr/local/lib/python3.7/dist-packages/pyarrow/error.pxi in pyarrow.lib.check_status()
ArrowNotImplementedError: Unsupported cast from struct<train: struct<name: string, num_bytes: int64, num_examples: int64, dataset_name: string>, validation: struct<name: string, num_bytes: int64, num_examples: int64, dataset_name: string>, test: struct<name: string, num_bytes: int64, num_examples: int64, dataset_name: string>> to list using function cast_list
```
## Expected results
The dataset should be correctly loaded with `load_dataset` IMO.
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.12.2.dev0
- Platform: Linux-5.11.0-34-generic-x86_64-with-glibc2.10
- Python version: 3.8.5
- PyArrow version: 5.0.0
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https://api.github.com/repos/huggingface/datasets/issues/3034 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3034/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3034/comments | https://api.github.com/repos/huggingface/datasets/issues/3034/events | https://github.com/huggingface/datasets/issues/3034 | 1,016,759,202 | I_kwDODunzps48moOi | 3,034 | Errors loading dataset using fs = a gcsfs.GCSFileSystem | {
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] | open | false | null | [] | null | [] | 1,633,464,428,000 | 1,633,465,599,000 | null | NONE | null | null | null | ## Describe the bug
Cannot load dataset using a `gcsfs.GCSFileSystem`. I'm not sure if this should be a bug in `gcsfs` or here...
Basically what seems to be happening is that since datasets saves datasets as folders and folders aren't "real objects" in gcs, gcsfs raises a 404 error. There are workarounds if you use gcsfs directly to download the file, but as is I can't get `load_from_disk` to work.
## Steps to reproduce the bug
```python
from datasets import load_dataset
# load some dataset
dataset = load_dataset("squad", split="train")
# save it to gcs
import gcsfs
fs = gcsfs.GCSFileSystem(project="my-gs-project")
dataset.save_to_disk("gs://my-bucket/squad", fs=fs)
# try to load it from gcs
from datasets import load_from_disk
dataset2 = load_from_disk("my-bucket/squad", fs=fs)
```
## Expected results
`dataset2` would be a copy of `dataset` but loaded from my bucket.
## Actual results
Long traceback but essentially it's a 404 error from gcsfs saying the object `my-bucket/squad` doesn't exist when this is called:
https://github.com/huggingface/datasets/blob/9c81b7d2e6d9feae69a084a3abda265a4ca07fb5/src/datasets/arrow_dataset.py#L977
This is because there is no actual object called `my-bucket/squad`, there are objects called `my-bucket/squad/dataset.arrow`, etc.
Note that *this* works fine, since it's explicitly saying "download all the objects with this prefix":
```python
fs.download(src_dataset_path + "/*", dataset_path.as_posix(), recursive=True)
```
For example, I can do a workaround this way:
```python
import tempfile
with tempfile.TemporaryDirectory() as temppath:
fs.download("gs://my-bucket/squad/*", temppath)
dataset2 = load_from_disk(temppath)
```
It's unclear to me if it's `gcsfs`'s responsibility to say "hey that's folder not a file, I should try to get objects inside of it not the object itself", or if that's `datasets`'s responsibility... I'm leaning towards the latter since you're never loading a dataset from one file using this function/method, only a dataset folder?
Another minor thing that should maybe should be rolled into this bug...
https://github.com/huggingface/datasets/blob/9c81b7d2e6d9feae69a084a3abda265a4ca07fb5/src/datasets/arrow_dataset.py#L968
These fail if you pass in a `gs://` path, e.g.
```python
dataset2 = load_from_disk("gs://my-bucket/squad", fs=fs)
```
Because at this point, `dataset_info_path` is `gs:/my-bucket/squad/dataset_info.json`, gcsfs throws a:
```
Invalid bucket name: 'gs:'
```
error
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.12.1
- Platform: macOS Big Sur 11.6
- Python version: 3.7.12
- PyArrow version: 5.0.0
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https://api.github.com/repos/huggingface/datasets/issues/3033 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3033/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3033/comments | https://api.github.com/repos/huggingface/datasets/issues/3033/events | https://github.com/huggingface/datasets/pull/3033 | 1,016,619,572 | PR_kwDODunzps4std7u | 3,033 | Actual "proper" install of ruamel.yaml in the windows CI | {
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"url": "https://api.github.com/repos/huggingface/datasets/pulls/3033",
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"merged_at": 1633456496000
} | It was impossible to update the package directly with `pip`. Indeed it was installed with `distutils` which prevents `pip` or `conda` to uninstall it.
I had to `rm` a directory from the `site-packages` python directory, and then do `pip install ruamel.yaml`
It's not that "proper" but I couldn't find better solutions | {
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https://api.github.com/repos/huggingface/datasets/issues/3032 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3032/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3032/comments | https://api.github.com/repos/huggingface/datasets/issues/3032/events | https://github.com/huggingface/datasets/issues/3032 | 1,016,488,475 | I_kwDODunzps48lmIb | 3,032 | Error when loading private dataset with "data_files" arg | {
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"We'll do a release tomorrow or on wednesday to make the fix available :)\r\n\r\nThanks for reproting !"
] | 1,633,448,787,000 | 1,634,052,382,000 | 1,634,052,346,000 | CONTRIBUTOR | null | null | null | ## Describe the bug
A clear and concise description of what the bug is.
Private datasets with no loading script can't be loaded using `data_files` parameter.
## Steps to reproduce the bug
```python
from datasets import load_dataset
data_files = {"train": "**/train/*/*.jsonl", "valid": "**/valid/*/*.jsonl"}
dataset = load_dataset('dalle-mini/encoded', data_files=data_files, use_auth_token=True, streaming=True)
```
Same error happens in non-streaming mode.
## Expected results
Files should be loaded (whether in streaming or not).
## Actual results
Error:
```
---------------------------------------------------------------------------
FileNotFoundError Traceback (most recent call last)
/usr/local/lib/python3.7/dist-packages/datasets/load.py in prepare_module(path, script_version, download_config, download_mode, dataset, force_local_path, dynamic_modules_path, return_resolved_file_path, return_associated_base_path, data_files, **download_kwargs)
539 try:
--> 540 local_path = cached_path(file_path, download_config=download_config)
541 except FileNotFoundError:
8 frames
FileNotFoundError: Couldn't find file at https://huggingface.co/datasets/dalle-mini/encoded/resolve/main/encoded.py
During handling of the above exception, another exception occurred:
HTTPError Traceback (most recent call last)
HTTPError: 404 Client Error: Not Found for url: https://huggingface.co/api/datasets/dalle-mini/encoded?full=true
During handling of the above exception, another exception occurred:
FileNotFoundError Traceback (most recent call last)
/usr/local/lib/python3.7/dist-packages/datasets/load.py in prepare_module(path, script_version, download_config, download_mode, dataset, force_local_path, dynamic_modules_path, return_resolved_file_path, return_associated_base_path, data_files, **download_kwargs)
547 except Exception:
548 raise FileNotFoundError(
--> 549 f"Couldn't find a directory or a {resource_type} named '{path}'. "
550 f"It doesn't exist locally at {expected_dir_for_combined_path_abs} or remotely on {hf_api.endpoint}/datasets"
551 )
FileNotFoundError: Couldn't find a directory or a dataset named 'dalle-mini/encoded'. It doesn't exist locally at /content/dalle-mini/encoded or remotely on https://huggingface.co/datasets
```
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.12.1
- Platform: Linux-5.4.104+-x86_64-with-Ubuntu-18.04-bionic
- Python version: 3.7.12
- PyArrow version: 3.0.0
@lhoestq | {
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https://api.github.com/repos/huggingface/datasets/issues/3031 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3031/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3031/comments | https://api.github.com/repos/huggingface/datasets/issues/3031/events | https://github.com/huggingface/datasets/pull/3031 | 1,016,458,496 | PR_kwDODunzps4ss9jn | 3,031 | Align tqdm control with cache control | {
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"Could you add this function to the documentation please ?\r\n\r\nYou can add it in `main_classes.rst`, and maybe add a `Tip` section in the `map` section in the `process.rst`"
] | 1,633,447,129,000 | 1,634,569,221,000 | 1,634,569,170,000 | CONTRIBUTOR | null | false | {
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} | Currently, once disabled with `disable_progress_bar`, progress bars cannot be re-enabled again. To overcome this limitation, this PR introduces the `set_progress_bar_enabled` function that accepts a boolean indicating whether to display progress bars. The goal is to provide a similar API to the existing cache control API. Following the Zen of Python (😄), there should be one and preferably only one obvious way to do it, so I'm also deprecating the aforementioned `disable_progress_bar` function. Additionally, I justify the deprecation with the fact that this function has never been in the docs.
Moreover, similar API changes have recently been introduced to [`tfds`](https://github.com/tensorflow/datasets/blob/a1e8b98f45b0214082b546cc967c67c43fffda55/tensorflow_datasets/core/utils/tqdm_utils.py#L98-L112).
Considering the popularity of the [comment](https://github.com/huggingface/datasets/issues/1627#issuecomment-751383559) I made a while ago, this API (`set_progress_bar_enabled` and `is_progress_bar_enabled`) should be mentioned in the docs, but I'm not sure where to put it exactly. Maybe we can replace the `logging_methods` page under `package_reference` with `utility_methods` and then introduce two subsections on that page: `Logging methods` and `tqdm control`.
Additionally, this PR:
* adds the `disable_tqdm` keyword arg of `Dataset._map_single` to the `ignore_kwargs` list to ignore it when computing the fingerprint (forgot to add it in #2696)
* deletes the unused components in `tqdm_utils.py`, which seem to be inherited from `tfds`
* disables the tqdm output in the test suite. As I see it, this output doesn't seem informative, but let me know if this is not a good idea | {
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https://api.github.com/repos/huggingface/datasets/issues/3030 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3030/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3030/comments | https://api.github.com/repos/huggingface/datasets/issues/3030/events | https://github.com/huggingface/datasets/pull/3030 | 1,016,435,324 | PR_kwDODunzps4ss41W | 3,030 | Add `remove_columns` to `IterableDataset` | {
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"Thanks ! That looks all good :)\r\n\r\nI don't think that batching would help. Indeed we're dealing with python iterators that yield elements one by one, so batched `map` needs to accumulate a batch, apply the function, and then yield examples from the batch.\r\n\r\nThough once we have parallel processing in `map`, we can reconsider it\r\n\r\nAlso feel free to check the CI failure - apparently the import of `Union` is missing",
"Thanks for the review and explaining that! \r\nOn top of what you said, I think `remove_columns` is very unlikely to be a bottleneck, so it doesn't matter anyways.",
"Thank you for reviewing! @mariosasko \r\n\r\nI wonder how the checking would work. Is there any checking present in `IterableDataset ` now? What if `.remove_columns()` is applied after some arbitrary `.map()`?",
"> I wonder how the checking would work. Is there any checking present in IterableDataset now? What if .remove_columns() is applied after some arbitrary .map()?\r\n\r\nThat's the challenge here indeed ^^ In this case it's not trivial to know the names of the columns. Feel free to open an issue so we can discuss this"
] | 1,633,445,913,000 | 1,633,707,195,000 | 1,633,707,113,000 | CONTRIBUTOR | null | false | {
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} | Fixes #2944
WIP
* Not tested yet.
* We might want to allow batched remove for efficiency.
@lhoestq Do you think it should have `batched=` and `batch_size=`? | {
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"I had to run datasets-cli with --ignore_verifications the first time since it was complaining about a missing file, but now it runs without that flag fine. I moved dummy_data.zip to the new folder, but also had to modify the filename of the test file in the zip (should I not have done that?). Finally, I added the pretty name tag.",
"Great, thanks for the help."
] | 1,633,443,567,000 | 1,633,445,806,000 | 1,633,445,805,000 | CONTRIBUTOR | null | false | {
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} | The nq_open dataset originally drew the validation set from this file:
https://github.com/google-research-datasets/natural-questions/blob/master/nq_open/NQ-open.efficientqa.dev.1.1.sample.jsonl
However, that's the dev set used specifically and only for the efficientqa competition, and it's not the same dev set as is used in every open-domain question answering paper (including the Lee et al paper that introduced the open-domain variant of NQ, cited at the top of the dataset file). This PR changes nq_open to use the standard validation split and bumps the version to 2.0.0 since this is a breaking change. | {
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https://api.github.com/repos/huggingface/datasets/issues/3028 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3028/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3028/comments | https://api.github.com/repos/huggingface/datasets/issues/3028/events | https://github.com/huggingface/datasets/pull/3028 | 1,016,230,272 | PR_kwDODunzps4ssO4s | 3,028 | Properly install ruamel-yaml for windows CI | {
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"@lhoestq I would say this does not \"properly\" install `ruamel-yaml`, but the contrary, you overwrite the previous version without desinstalling it first.\r\n\r\nAccording to `pip` docs:\r\n> This can break your system if the existing package is of a different version or was installed with a different package manager!\r\n\r\nNote that our case fulfills both conditions:\r\n- the installing version (`0.17.16`) is different from the existing one (`0.15.87`)\r\n- you are installing using `pip` (`setuptools`), whereas the exisitng version was installed using `distutils`\r\n\r\nThat is why I did not fix the issue this way, made a hotfix pinning `huggingface_hub` (#3025), while looking for a permanent solution for the issue.",
"Yea I did this because we need the latest version of `huggingface_hub` for #2986 and because I didn't want to ssh to the windows worker x)\r\nMaybe it can be fixed by installing it with conda - let me try",
"Oh yea it may not work since it was first installed with distutils"
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https://api.github.com/repos/huggingface/datasets/issues/3027 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3027/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3027/comments | https://api.github.com/repos/huggingface/datasets/issues/3027/events | https://github.com/huggingface/datasets/issues/3027 | 1,016,150,117 | I_kwDODunzps48kThl | 3,027 | Resolve data_files by split name | {
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"Awesome @lhoestq I like the proposal and it works great on my JSON community dataset. Here is the [log](https://gist.github.com/vblagoje/714babc325bcbdd5de579fd8e1648892). ",
"From my discussion with @borisdayma it would be more general the files match if their paths contains the split name - not only if the filename contains the split name. For example for a dataset like this:\r\n```\r\ntrain/\r\n└── data.csv\r\ntest/\r\n└── data.csv\r\n```\r\n\r\nBut IMO the default should be \r\n```\r\ndata/\r\n├── train.csv\r\n└── test.csv\r\n```\r\nbecause it allows people to have other directories if they have different subsets of their data (different configurations, not splits)",
"I just created a PR for this at https://github.com/huggingface/datasets/pull/3221, let me know what you think :)"
] | 1,633,429,476,000 | 1,636,134,598,000 | 1,636,134,597,000 | MEMBER | null | null | null | This issue is about discussing the default behavior when someone loads a dataset that consists in data files. For example:
```python
load_dataset("lhoestq/demo1")
```
should return two splits "train" and "test" since the dataset repostiory is like
```
data/
├── train.csv
└── test.csv
```
Currently it returns only one split "train" which contains the data of both files
I started playing with this idea on this branch btw: `resolve-data_files-by-split-name`
Basically the idea is that if you named you data files after split names then the default pattern is
```python
{
"train": ["*train*"],
"test": ["*test*"],
"validation": ["*dev*", "valid"],
}
```
otherwise it's
```python
{
"train": ["*"]
}
```
Let me know what you think !
cc @albertvillanova @LysandreJik @vblagoje | {
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Fix #3024. | {
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] | null | [] | 1,633,423,606,000 | 1,633,427,907,000 | 1,633,427,907,000 | MEMBER | null | null | null | ## Describe the bug
There is an error during installation of tests dependencies for Windows: https://app.circleci.com/pipelines/github/huggingface/datasets/7981/workflows/9b6a0114-2b8e-4069-94e5-e844dbbdba4e/jobs/49206
```
ERROR: Cannot uninstall 'ruamel-yaml'. It is a distutils installed project and thus we cannot accurately determine which files belong to it which would lead to only a partial uninstall.
```
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https://api.github.com/repos/huggingface/datasets/issues/3023 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3023/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3023/comments | https://api.github.com/repos/huggingface/datasets/issues/3023/events | https://github.com/huggingface/datasets/pull/3023 | 1,015,923,031 | PR_kwDODunzps4srQ4i | 3,023 | Fix typo | {
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https://api.github.com/repos/huggingface/datasets/issues/3022 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3022/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3022/comments | https://api.github.com/repos/huggingface/datasets/issues/3022/events | https://github.com/huggingface/datasets/pull/3022 | 1,015,750,221 | PR_kwDODunzps4sqve6 | 3,022 | MeDAL dataset: Add further description and update download URL | {
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"@lhoestq I'm a bit confused by the error message. I haven't touched the YAML code at all - do you have any insight on that?",
"I just added the missing `pretty_name` tag in the YAML - sorry about that ;)",
"Thanks! Seems like it did the trick since the tests are passing. Let me know if there's anything else I can do in this PR!",
"It's all good thank you :)\r\n\r\nmerging !"
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* Dataset Structure
* Data Instances
* Data Splits
* Source Data
* Annotations
* Discussions of Biases
* LIcensing Information | {
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https://api.github.com/repos/huggingface/datasets/issues/3021 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3021/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3021/comments | https://api.github.com/repos/huggingface/datasets/issues/3021/events | https://github.com/huggingface/datasets/pull/3021 | 1,015,444,094 | PR_kwDODunzps4spzJU | 3,021 | Support loading dataset from multiple zipped CSV data files | {
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CC: @lewtun | {
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https://api.github.com/repos/huggingface/datasets/issues/3020 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3020/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3020/comments | https://api.github.com/repos/huggingface/datasets/issues/3020/events | https://github.com/huggingface/datasets/pull/3020 | 1,015,406,105 | PR_kwDODunzps4sprfa | 3,020 | Add a metric for the MATH dataset (competition_math). | {
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"I believe the only failed test related to this PR is tests/test_metric_common.py::LocalMetricTest::test_load_metric_competition_math. It gives the following error:\r\n\r\nImportError: To be able to use this dataset, you need to install the following dependencies['math_equivalence'] using 'pip install git+https://github.com/hendrycks/math.git' for instance'\r\n\r\nIt fails along with (these fail with ImportError as well):\r\ntest_load_metric_bertscore\r\ntest_load_metric_bleurt\r\ntest_load_metric_comet\r\ntest_load_metric_coval\r\n\r\nLet me know if there is anything I need to change.",
"Hi ! The script looks all good thanks :)\r\n\r\nTo fix the CI you just need to merge `master` into your branch\r\n```\r\ngit fetch upstream/master\r\ngit merge upstream/master\r\n```\r\n\r\nThen you also need to add `math_equivalence` to the list of git packages installed for the tests in `additional-tests-requirements.txt`\r\nhttps://github.com/huggingface/datasets/blob/ba831e4bcd175ae3d52afbf7d12c4f625bf541b0/additional-tests-requirements.txt#L1-L3",
"I ran:\r\n\r\ngit fetch upstream\r\ngit merge upstream/master\r\n\r\nAnd I also added math_equivalence to the list of git packages installed for the tests in additional-tests-requirements.txt\r\n\r\ntests/test_metric_common.py fails with the same errors as before. tests/test_dataset_cards.py also fails, but it doesn't look related to this PR (it's an issue datasets/ami/README.md).",
"@lhoestq Anything else I can do? I re-merged again and am getting the same test failures as described in the previous comment."
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Affected versions: 1.12.0 and 1.12.1
This should fix #3010 | {
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"@lhoestq I would like to draw your attention to the proposed API by @lewtun, using `data_dir` to pass the ZIP URL.\r\n\r\nI'm not totally convinced with this... What do you think?\r\n\r\nMaybe we could discuss other approaches...\r\n\r\nOne brainstorming idea: what about using URL chaining with the hop operator in `data_files`?",
"`data_dir` is currently exclusively used for manually downloaded data.\r\n\r\nMaybe we can have an API that only uses data_files as you are suggesting, using URL chaining ?\r\n```python\r\nfrom datasets import load_dataset\r\n\r\nurl = \"https://domain.org/filename.zip\"\r\ndata_files = {\"train\": \"zip://train_filename.csv::\" + url, \"test\": \"zip://test_filename.csv::\" + url}\r\ndataset = load_dataset(\"csv\", data_files=data_files)\r\n```\r\n\r\nURL chaining is used by `fsspec` to get access to files in nested filesystems of any kind. Since `fsspec` is being used by `pandas`, `dask` and also extensively by `datasets` I think it would be nice to use it here too",
"URL chaining sounds super nice to me! And it's also a nice way to leverage the same concepts we currently have in the docs around `fsspec` :)"
] | 1,633,360,619,000 | 1,633,444,377,000 | null | MEMBER | null | null | null | As requested by @lewtun, support loading multiple zipped CSV data files.
```python
from datasets import load_dataset
url = "https://domain.org/filename.zip"
data_files = {"train": "train_filename.csv", "test": "test_filename.csv"}
dataset = load_dataset("csv", data_dir=url, data_files=data_files)
```
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Related to #1878. | {
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Related to #2880, #2876, #2874 | {
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Related to #2982. | {
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"To keeps things simple maybe we should use `load_dataset_builder` in `get_dataset_infos`.\r\n`load_dataset_builder` instantiates a builder and runs the _infos() method in order to give you the most up-to-date infos, even if the dataset_infos.json is outdated or missing."
] | 1,633,340,824,000 | 1,645,459,030,000 | 1,645,459,030,000 | CONTRIBUTOR | null | null | null | Using the dedicated function `get_dataset_infos` on a dataset that has no dataset-info.json file returns an empty info:
```
>>> from datasets import get_dataset_infos
>>> get_dataset_infos('wit')
{}
```
While it's totally possible to get it (regenerate it) with:
```
>>> from datasets import load_dataset_builder
>>> builder = load_dataset_builder('wit')
>>> builder.info
DatasetInfo(description='Wikipedia-based Image Text (WIT) Dataset is a large multimodal multilingual dataset. WIT is composed of a curated set\n of 37.6 million entity rich image-text examples with 11.5 million unique images across 108 Wikipedia languages. Its\n size enables WIT to be used as a pretraining dataset for multimodal machine learning models.\n', citation='@article{srinivasan2021wit,\n title={WIT: Wikipedia-based Image Text Dataset for Multimodal Multilingual Machine Learning},\n author={Srinivasan, Krishna and Raman, Karthik and Chen, Jiecao and Bendersky, Michael and Najork, Marc},\n journal={arXiv preprint arXiv:2103.01913},\n year={2021}\n}\n', homepage='https://github.com/google-research-datasets/wit', license='', features={'b64_bytes': Value(dtype='string', id=None), 'embedding': Sequence(feature=Value(dtype='float64', id=None), length=-1, id=None), 'image_url': Value(dtype='string', id=None), 'metadata_url': Value(dtype='string', id=None), 'original_height': Value(dtype='int32', id=None), 'original_width': Value(dtype='int32', id=None), 'mime_type': Value(dtype='string', id=None), 'caption_attribution_description': Value(dtype='string', id=None), 'wit_features': Sequence(feature={'language': Value(dtype='string', id=None), 'page_url': Value(dtype='string', id=None), 'attribution_passes_lang_id': Value(dtype='string', id=None), 'caption_alt_text_description': Value(dtype='string', id=None), 'caption_reference_description': Value(dtype='string', id=None), 'caption_title_and_reference_description': Value(dtype='string', id=None), 'context_page_description': Value(dtype='string', id=None), 'context_section_description': Value(dtype='string', id=None), 'hierarchical_section_title': Value(dtype='string', id=None), 'is_main_image': Value(dtype='string', id=None), 'page_changed_recently': Value(dtype='string', id=None), 'page_title': Value(dtype='string', id=None), 'section_title': Value(dtype='string', id=None)}, length=-1, id=None)}, post_processed=None, supervised_keys=None, task_templates=None, builder_name='wit', config_name='default', version=0.0.0, splits=None, download_checksums=None, download_size=None, post_processing_size=None, dataset_size=None, size_in_bytes=None)
```
Should we test if info is empty, and in that case regenerate it? Or always generate it? | {
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https://api.github.com/repos/huggingface/datasets/issues/3012 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3012/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3012/comments | https://api.github.com/repos/huggingface/datasets/issues/3012/events | https://github.com/huggingface/datasets/pull/3012 | 1,014,958,931 | PR_kwDODunzps4soRTu | 3,012 | Replace item with float in metrics | {
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} | As pointed out by @mariosasko in #3001, calling `float()` instad of `.item()` is faster.
Moreover, it might avoid potential issues if any of the third-party functions eventually returns a `float` instead of an `np.float64`.
Related to #3001. | {
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https://api.github.com/repos/huggingface/datasets/issues/3011 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3011/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3011/comments | https://api.github.com/repos/huggingface/datasets/issues/3011/events | https://github.com/huggingface/datasets/issues/3011 | 1,014,935,713 | I_kwDODunzps48frCh | 3,011 | load_dataset_builder should error if "name" does not exist? | {
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"Yes I think it should raise an error. Currently it looks like it instantiates a custom configuration with the name given by the user:\r\nhttps://github.com/huggingface/datasets/blob/ba27ce33bf568374cf23a07669fdd875b5718bc2/src/datasets/builder.py#L391-L397"
] | 1,633,339,246,000 | 1,663,679,107,000 | null | CONTRIBUTOR | null | null | null | ```
import datasets as ds
builder = ds.load_dataset_builder('sent_comp', name="doesnotexist")
builder.info.config_name
```
returns
```
'doesnotexist'
```
Shouldn't it raise an error instead?
For this dataset, the only valid values for `name` should be: `"default"` or `None` (ie. argument not passed) | {
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"### Update:\r\nI wrote a bit cleaner code snippet (without transforming to json) that can expose leaking.\r\n```python\r\nimport datasets\r\nimport json\r\n\r\nitems = ['ab', 'c', 'df']\r\n\r\nds = datasets.Dataset.from_dict({'col': items})\r\nprint(list(ds))\r\n# > Prints: [{'col': 'ab'}, {'col': 'c'}, {'col': 'df'}]\r\n\r\nfiltered = ds\r\n\r\n# get all items that are starting with a character with ascii code bigger than 'a'\r\nfiltered = filtered.filter(lambda x: x['col'][0] > 'a', load_from_cache_file=False)\r\nprint(list(filtered))\r\n# > Prints: [{'col': 'c'}, {'col': 'df'}] as expected\r\n\r\n# get all items that are shorter than 2\r\nfiltered = filtered.filter(lambda x: len(x['col']) < 2, load_from_cache_file=False)\r\nprint(list(filtered))\r\n# > Prints: [{'col': 'ab'}] -> this is a leaked item from the first filter\r\n# > Should be: [{'col': 'c'}]\r\n```",
"Thanks for reporting. I'm looking into it",
"I just pushed a fix ! We'll do a new release soon.\r\nIn the meantime feel free to install `datasets` from source to play with it",
"Thanks, I'm already using it from your branch!"
] | 1,633,338,295,000 | 1,654,105,004,000 | 1,654,105,004,000 | NONE | null | null | null | ## Describe the bug
As there's no support for lists within dataset fields, I convert my lists to json-string format. However, the bug described is occurring even when the data format is 'string'.
These samples show that filtering behavior diverges from what's expected when chaining filterings.
On sample 2 the second filtering leads to "leaking" of data that should've been filtered on the first filtering into the results.
## Steps to reproduce the bug
Sample 1:
```python
import datasets
import json
items = [[1, 2], [3], [4]]
jsoned_items = map(json.dumps, [[1, 2], [3], [4]])
ds = datasets.Dataset.from_dict({'a': jsoned_items})
print(list(ds))
# > Prints: [{'a': '[1, 2]'}, {'a': '[3]'}, {'a': '[4]'}] as expected
filtered = ds
# get all lists that are shorter than 2
filtered = filtered.filter(lambda x: len(json.loads(x['a'])) < 2, load_from_cache_file=False)
print(list(filtered))
# > Prints: [{'a': '[3]'}, {'a': '[4]'}] as expected
# get all lists, which have a value bigger than 3 on its zero index
filtered = filtered.filter(lambda x: json.loads(x['a'])[0] > 3, load_from_cache_file=False)
print(list(filtered))
# > Should be: [{'a': [4]}]
# > Prints: [{'a': [3]}]
```
Sample 2:
```python
import datasets
import json
items = [[1, 2], [3], [4]]
jsoned_items = map(json.dumps, [[1, 2], [3], [4]])
ds = datasets.Dataset.from_dict({'a': jsoned_items})
print(list(ds))
# > Prints: [{'a': '[1, 2]'}, {'a': '[3]'}, {'a': '[4]'}]
filtered = ds
# get all lists, which have a value bigger than 3 on its zero index
filtered = filtered.filter(lambda x: json.loads(x['a'])[0] > 3, load_from_cache_file=False)
print(list(filtered))
# > Prints: [{'a': '[4]'}] as expected
# get all lists that are shorter than 2
filtered = filtered.filter(lambda x: len(json.loads(x['a'])) < 2, load_from_cache_file=False)
print(list(filtered))
# > Prints: [{'a': '[1, 2]'}]
# > Should be: [{'a': '[4]'}] (remain intact)
```
## Expected results
Expected and actual results are attached to the code snippets.
## Actual results
Expected and actual results are attached to the code snippets.
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.12.1
- Platform: Windows-10-10.0.19042-SP0
- Python version: 3.9.7
- PyArrow version: 5.0.0
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Related to #2884, #2783 and #2619. | {
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https://api.github.com/repos/huggingface/datasets/issues/3007 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3007/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3007/comments | https://api.github.com/repos/huggingface/datasets/issues/3007/events | https://github.com/huggingface/datasets/pull/3007 | 1,014,775,450 | PR_kwDODunzps4sns-n | 3,007 | Correct a typo | {
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https://api.github.com/repos/huggingface/datasets/issues/3006 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3006/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3006/comments | https://api.github.com/repos/huggingface/datasets/issues/3006/events | https://github.com/huggingface/datasets/pull/3006 | 1,014,770,821 | PR_kwDODunzps4snsBm | 3,006 | Fix Windows paths in CommonLanguage dataset | {
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Related to #2989. | {
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https://api.github.com/repos/huggingface/datasets/issues/3005 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3005/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3005/comments | https://api.github.com/repos/huggingface/datasets/issues/3005/events | https://github.com/huggingface/datasets/issues/3005 | 1,014,615,420 | I_kwDODunzps48ec18 | 3,005 | DatasetDict.filter and Dataset.filter crashes with any "fn_kwargs" argument | {
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"Hi @DrMatters, thanks for reporting.\r\n\r\nThis issue was fixed 14 days ago: #2950.\r\n\r\nCurrently, the fix is only in the master branch and will be made available in our next library release.\r\n\r\nIn the meantime, you can incorporate the fix by installing datasets from the master branch:\r\n```shell\r\npip install -U git+ssh://git@github.com/huggingface/datasets.git@master#egg=datasest\r\n```\r\nor\r\n```shell\r\npip install -U git+https://github.com/huggingface/datasets.git@master#egg=datasets\r\n```",
"Thanks, sorry for bothering"
] | 1,633,308,569,000 | 1,633,947,481,000 | 1,633,337,173,000 | NONE | null | null | null | ## Describe the bug
The ".filter" method of DatasetDict or Dataset objects fails when passing any "fn_kwargs" argument
## Steps to reproduce the bug
```python
import datasets
example_dataset = datasets.Dataset.from_dict({"a": {1, 2, 3, 4}})
def filter_value(example, value):
return example['a'] == value
filtered = example_dataset.filter(filter_value, fn_kwargs={'value': 3})
```
## Expected results
`filtered` is a dataset containing {"a": {3}}
## Actual results
> Traceback (most recent call last):
> File "C:\Users\qsemi\Documents\git\nlp_experiments\gpt_celebrity\src\test_faulty_filter.py", line 8, in <module>
> filtered = example_dataset.filter(filter_value, fn_kwargs={'value': 3})
> File "C:\Users\qsemi\miniconda3\envs\main\lib\site-packages\datasets\arrow_dataset.py", line 185, in wrapper
> out: Union["Dataset", "DatasetDict"] = func(self, *args, **kwargs)
> File "C:\Users\qsemi\miniconda3\envs\main\lib\site-packages\datasets\fingerprint.py", line 398, in wrapper
> out = func(self, *args, **kwargs)
> File "C:\Users\qsemi\miniconda3\envs\main\lib\site-packages\datasets\arrow_dataset.py", line 2169, in filter
> indices = self.map(
> File "C:\Users\qsemi\miniconda3\envs\main\lib\site-packages\datasets\arrow_dataset.py", line 1686, in map
> return self._map_single(
> File "C:\Users\qsemi\miniconda3\envs\main\lib\site-packages\datasets\arrow_dataset.py", line 185, in wrapper
> out: Union["Dataset", "DatasetDict"] = func(self, *args, **kwargs)
> File "C:\Users\qsemi\miniconda3\envs\main\lib\site-packages\datasets\fingerprint.py", line 398, in wrapper
> out = func(self, *args, **kwargs)
> File "C:\Users\qsemi\miniconda3\envs\main\lib\site-packages\datasets\arrow_dataset.py", line 2048, in _map_single
> batch = apply_function_on_filtered_inputs(
> File "C:\Users\qsemi\miniconda3\envs\main\lib\site-packages\datasets\arrow_dataset.py", line 1939, in apply_function_on_filtered_inputs
> function(*fn_args, effective_indices, **fn_kwargs) if with_indices else function(*fn_args, **fn_kwargs)
> TypeError: get_indices_from_mask_function() got an unexpected keyword argument 'value'
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.12.1
- Platform: Windows-10-10.0.19042-SP0
- Python version: 3.9.7
- PyArrow version: 5.0.0
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https://api.github.com/repos/huggingface/datasets/issues/3004 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3004/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3004/comments | https://api.github.com/repos/huggingface/datasets/issues/3004/events | https://github.com/huggingface/datasets/pull/3004 | 1,014,336,617 | PR_kwDODunzps4smfPF | 3,004 | LexGLUE: A Benchmark Dataset for Legal Language Understanding in English. | {
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"Please wait until Tuesday. Arxiv pre-print is pending. 🤗 ",
"Hi @lhoestq, I updated the README with the Arxiv publication info and now the tests are not passing.\r\n\r\nIt seems that the error is completely irrelevant to my code:\r\n\r\n```\r\n Attempting uninstall: ruamel.yaml\r\n Found existing installation: ruamel-yaml 0.15.87\r\nERROR: Cannot uninstall 'ruamel-yaml'. It is a distutils installed project and thus we cannot accurately determine which files belong to it which would lead to only a partial uninstall.\r\n```",
"Hi ! Thanks for adding this one. Amazing work :o \r\n\r\nYea you can ignore the `ruamel-yaml` error, it's unrelated to your PR and fixed on `master`",
"Hi @lhoestq, \r\n\r\n- I fetched and merged the upstream master to get the `ruamel-yaml` fix.\r\n- I updated the README.md file including more information for the inputs and labels, while I also turned all tables in HTML format hoping that they will render nicely in the dataset card in the HF website.\r\n- I also simplified the CaseHOLD input, excl. the unused `question` field and the `context` replicas, as suggested.\r\n"
] | 1,633,255,405,000 | 1,634,132,222,000 | 1,634,132,221,000 | CONTRIBUTOR | null | false | {
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} | Inspired by the recent widespread use of the GLUE multi-task benchmark NLP dataset (Wang et al., 2018), the subsequent more difficult SuperGLUE (Wang et al., 2019), other previous multi-task NLP benchmarks (Conneau and Kiela, 2018; McCann et al., 2018), and similar initiatives in other domains (Peng et al., 2019), we introduce the Legal General Language Understanding Evaluation (LexGLUE) benchmark, a benchmark dataset to evaluate the performance of NLP methods in legal tasks. LexGLUE is based on seven existing legal NLP datasets, selected using criteria largely from SuperGLUE.
As in GLUE and SuperGLUE (Wang et al., 2019b,a), one of our goals is to push towards generic (or ‘foundation’) models that can cope with multiple NLP tasks, in our case legal NLP tasks possibly with limited task-specific fine-tuning. Another goal is to provide a convenient and informative entry point for NLP researchers and practitioners wishing to explore or develop methods for legalNLP. Having these goals in mind, the datasets we include in LexGLUE and the tasks they address have been simplified in several ways to make it easier for newcomers and generic models to address all tasks.
LexGLUE benchmark is accompanied by experimental infrastructure that relies on Hugging Face Transformers library and resides at: https://github.com/coastalcph/lex-glue. | {
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https://api.github.com/repos/huggingface/datasets/issues/3003 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3003/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3003/comments | https://api.github.com/repos/huggingface/datasets/issues/3003/events | https://github.com/huggingface/datasets/pull/3003 | 1,014,137,933 | PR_kwDODunzps4smExP | 3,003 | common_language: Fix license in README.md | {
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} | ...it's correct elsewhere | {
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https://api.github.com/repos/huggingface/datasets/issues/3002 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3002/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3002/comments | https://api.github.com/repos/huggingface/datasets/issues/3002/events | https://github.com/huggingface/datasets/pull/3002 | 1,014,120,524 | PR_kwDODunzps4smCNO | 3,002 | Remove a reference to the open Arrow file when deleting a TF dataset created with to_tf_dataset | {
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"@lhoestq The test passes even without the try/except block!",
"Hey, I'm a little late because I was caught up in the course work, but I double-checked this and it looks great. Thanks for fixing!"
] | 1,633,196,649,000 | 1,634,125,680,000 | 1,634,115,803,000 | CONTRIBUTOR | null | false | {
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} | This [comment](https://github.com/huggingface/datasets/issues/2934#issuecomment-922970919) explains the issue. This PR fixes that with a `weakref` callback, and additionally:
* renames `TensorflowDatasetMixIn` to `TensorflowDatasetMixin` for consistency
* correctly indents `TensorflowDatasetMixin`'s docstring
* replaces `tf.data.AUTOTUNE` with `tf.data.experimental.AUTOTUNE` (we support TF>=2.2 according to the [setup.py](https://github.com/huggingface/datasets/blob/fc46bba66ba4f432cc10501c16a677112e13984c/setup.py#L188) and `AUTOTUNE` has been moved to the experimental part of `tf.data` in 1.X if I'm not mistaken)
Fixes #2934 | {
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https://api.github.com/repos/huggingface/datasets/issues/3001 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3001/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3001/comments | https://api.github.com/repos/huggingface/datasets/issues/3001/events | https://github.com/huggingface/datasets/pull/3001 | 1,014,024,982 | PR_kwDODunzps4sl0BY | 3,001 | Fix cast to Python scalar in Matthews Correlation metric | {
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} | This PR is motivated by issue #2964.
The Matthews Correlation metric relies on sklearn's `matthews_corrcoef` function to compute the result. This function returns either `float` or `np.float64` (see the [source](https://github.com/scikit-learn/scikit-learn/blob/844b4be24d20fc42cc13b957374c718956a0db39/sklearn/metrics/_classification.py#L906-L909)). Obviously, calling `.item()` on the float value will fail, so I'm fixing this with the built-in `float()` function, which covers both cases. Surprisingly, on my machine, casting `np.float64` to a Python scalar with `float()` is even faster than with the `.item()` method. | {
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https://api.github.com/repos/huggingface/datasets/issues/3000 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3000/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3000/comments | https://api.github.com/repos/huggingface/datasets/issues/3000/events | https://github.com/huggingface/datasets/pull/3000 | 1,013,613,219 | PR_kwDODunzps4skusL | 3,000 | Fix json loader when conversion not implemented | {
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"And we're already at PR number 3,000 ! ^^",
"Thank you so much for fixing this @lhoestq 😍 ! I just tested the branch out and it works like a charm!"
] | 1,633,110,442,000 | 1,633,111,500,000 | 1,633,110,863,000 | MEMBER | null | false | {
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By increasing the block size it makes it work again.
Hopefully it should help with https://github.com/huggingface/datasets/issues/2799
I tried with the file mentioned in the issue and it worked for me
cc @lewtun can you try again from this branch ? | {
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https://api.github.com/repos/huggingface/datasets/issues/2999 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/2999/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/2999/comments | https://api.github.com/repos/huggingface/datasets/issues/2999/events | https://github.com/huggingface/datasets/pull/2999 | 1,013,536,933 | PR_kwDODunzps4skgCm | 2,999 | Set trivia_qa writer batch size | {
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https://api.github.com/repos/huggingface/datasets/issues/2998 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/2998/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/2998/comments | https://api.github.com/repos/huggingface/datasets/issues/2998/events | https://github.com/huggingface/datasets/issues/2998 | 1,013,372,871 | I_kwDODunzps48ZtfH | 2,998 | cannot shuffle dataset loaded from disk | {
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] | open | false | null | [] | null | [] | 1,633,096,192,000 | 1,633,096,192,000 | null | NONE | null | null | null | ## Describe the bug
dataset loaded from disk cannot be shuffled.
## Steps to reproduce the bug
```
my_dataset = load_from_disk('s3://my_file/validate', fs=s3)
sample = my_dataset.select(range(100)).shuffle(seed=1234)
```
## Actual results
```
sample = my_dataset .select(range(100)).shuffle(seed=1234)
File "/home/ubuntu/anaconda3/envs/pytorch_p37/lib/python3.7/site-packages/datasets/arrow_dataset.py", line 185, in wrapper
out: Union["Dataset", "DatasetDict"] = func(self, *args, **kwargs)
File "/home/ubuntu/anaconda3/envs/pytorch_p37/lib/python3.7/site-packages/datasets/fingerprint.py", line 398, in wrapper
out = func(self, *args, **kwargs)
File "/home/ubuntu/anaconda3/envs/pytorch_p37/lib/python3.7/site-packages/datasets/arrow_dataset.py", line 2494, in shuffle
new_fingerprint=new_fingerprint,
File "/home/ubuntu/anaconda3/envs/pytorch_p37/lib/python3.7/site-packages/datasets/arrow_dataset.py", line 185, in wrapper
out: Union["Dataset", "DatasetDict"] = func(self, *args, **kwargs)
File "/home/ubuntu/anaconda3/envs/pytorch_p37/lib/python3.7/site-packages/datasets/fingerprint.py", line 398, in wrapper
out = func(self, *args, **kwargs)
File "/home/ubuntu/anaconda3/envs/pytorch_p37/lib/python3.7/site-packages/datasets/arrow_dataset.py", line 2303, in select
tmp_file = tempfile.NamedTemporaryFile("wb", dir=os.path.dirname(indices_cache_file_name), delete=False)
File "/home/ubuntu/anaconda3/envs/pytorch_p37/lib/python3.7/tempfile.py", line 547, in NamedTemporaryFile
(fd, name) = _mkstemp_inner(dir, prefix, suffix, flags, output_type)
File "/home/ubuntu/anaconda3/envs/pytorch_p37/lib/python3.7/tempfile.py", line 258, in _mkstemp_inner
fd = _os.open(file, flags, 0o600)
FileNotFoundError: [Errno 2] No such file or directory: '/tmp/tmpnnu5uhnx/my_file/validate/tmpy76d70g4'
```
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.12.1
- Python version: 3.7
- PyArrow version: 5.0.0
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https://api.github.com/repos/huggingface/datasets/issues/2997 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/2997/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/2997/comments | https://api.github.com/repos/huggingface/datasets/issues/2997/events | https://github.com/huggingface/datasets/issues/2997 | 1,013,270,069 | I_kwDODunzps48ZUY1 | 2,997 | Dataset has incorrect labels | {
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"Hi @marshmellow77, thanks for reporting.\r\n\r\nThat issue is fixed since `datasets` version 1.9.0 (see 16bc665f2753677c765011ef79c84e55486d4347).\r\n\r\nPlease, update `datasets` with: `pip install -U datasets`",
"Thanks. Please note that the dataset explorer (https://huggingface.co/datasets/viewer/?dataset=turkish_product_reviews) still shows the incorrect state. The sentiment for the first few customer reviews is actually negative and should be labelled with \"0\", see screenshot:\r\n\r\n![Capture1](https://user-images.githubusercontent.com/63367770/135637150-93d9b09b-f1dd-4701-97a5-5cb2672ec0c7.PNG)\r\n\r\n\r\n",
"Thanks @marshmellow77, good catch! I'm transferring this issue to https://github.com/huggingface/datasets-viewer. "
] | 1,633,090,146,000 | 1,633,102,320,000 | 1,633,096,474,000 | NONE | null | null | null | The dataset https://huggingface.co/datasets/turkish_product_reviews has incorrect labels - all reviews are labelled with "1" (positive sentiment). None of the reviews is labelled with "0". See screenshot attached:
![Capture](https://user-images.githubusercontent.com/63367770/135617428-14ce0b27-5208-4e66-a3ee-71542e3257b4.PNG)
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https://api.github.com/repos/huggingface/datasets/issues/2996 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/2996/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/2996/comments | https://api.github.com/repos/huggingface/datasets/issues/2996/events | https://github.com/huggingface/datasets/pull/2996 | 1,013,266,373 | PR_kwDODunzps4sjrP6 | 2,996 | Remove all query parameters when extracting protocol | {
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"Beware of cases like: `http://ufal.ms.mff.cuni.cz/umc/005-en-ur/download.php?f=umc005-corpus.zip` or `gzip://bg-cs.xml::https://opus.nlpl.eu/download.php?f=Europarl/v8/xml/bg-cs.xml.gz`. I see these URLs in the errors (https://observablehq.com/@huggingface/quality-assessment-of-datasets-loading?collection=@huggingface/datasets), but not in the `Extraction protocol for file at xxx is not implemented yet` error, so I'm not sure if they would break now or not.\r\n\r\nMaybe: first try to find an extension, and if none, try to remove the `?...` part and retry to find the extension.\r\n\r\nBy the way, here is the list of URLs for errors of this type, with a '?' in the URL:\r\n\r\n```\r\nhttps://dl.orangedox.com/WyaCpL?dl=1\r\nhttps://drive.google.com/u/0/uc?id=0Bz8a_Dbh9QhbaW12WVVZS2drcnM&export=download\r\nhttps://drive.google.com/u/0/uc?id=1-CaP3xHgZxOGjQ3pXC5tr9YnIajmel-t&export=download\r\nhttps://drive.google.com/u/0/uc?id=11EBGHMAswT5JDO60xh7gnZfYjpMQs7h7&export=download\r\nhttps://drive.google.com/u/0/uc?id=13JCCr-IjZK7uhbLXeufptr_AxvsKinVl&export=download\r\nhttps://drive.google.com/u/0/uc?id=13ZyFc2qepAYSg9WIFaeJ9y402gblsl2e&export=download\r\nhttps://drive.google.com/u/0/uc?id=15auwrFAlq52JJ61u7eSfnhT9rZtI5sjk&export=download\r\nhttps://drive.google.com/u/0/uc?id=16OgJ_OrfzUF_i3ftLjFn9kpcyoi7UJeO&export=download\r\nhttps://drive.google.com/u/0/uc?id=1BFYF05rx-DK9Eb5hgoIgd6EcB8zOI-zu&export=download\r\nhttps://drive.google.com/u/0/uc?id=1Cz1Un9p8Xn9IpEMMrg2kXSDt0dnjxc4z&export=download\r\nhttps://drive.google.com/u/0/uc?id=1H7FphKVVCYoH49sUXl79CuztEfJLaKoF&export=download\r\nhttps://drive.google.com/u/0/uc?id=1NAeuWLgYBzLwU5jCdkrtj4_PRUocuvlb&export=download\r\nhttps://drive.google.com/u/0/uc?id=1OletxmPYNkz2ltOr9pyT0b0iBtUWxslh&export=download\r\nhttps://drive.google.com/u/0/uc?id=1OletxmPYNkz2ltOr9pyT0b0iBtUWxslh&export=download/\r\nhttps://drive.google.com/u/0/uc?id=1R1jR4DcH2UEaM1ZwDSRHdfTGvkCNu6NW&export=download\r\nhttps://drive.google.com/u/0/uc?id=1hDHeoFIfQzJec1NgZNXh3CTNbchiIvuG&export=download\r\nhttps://drive.google.com/u/0/uc?id=1wxwqnWGRzwvc_-ugRoFX8BPgpO3Q7sch&export=download\r\nhttps://drive.google.com/u/0/uc?id=1ydsOTvBZXKqcRvXawOuePrJ99slOEbkk&export=download\r\nhttps://drive.google.com/uc?export=download&id=0BwmD_VLjROrfTHk4NFg2SndKcjQ\r\nhttps://drive.google.com/uc?export=download&id=0Bz8a_Dbh9QhbQ2Vic1kxMmZZQ1k\r\nhttps://drive.google.com/uc?export=download&id=0Bz8a_Dbh9QhbZlU4dXhHTFhZQU0\r\nhttps://drive.google.com/uc?export=download&id=0Bz8a_Dbh9Qhbd2JNdDBsQUdocVU\r\nhttps://drive.google.com/uc?export=download&id=1-w-0uqaC6hnRn1F_3XqJEvi09zlcTIhX\r\nhttps://drive.google.com/uc?export=download&id=11wMGqNVSwwk6zUnDaJEgm3qT71kAHeff\r\nhttps://drive.google.com/uc?export=download&id=17FGi8KI9N9SuGe7elM8qU8_3fx4sfgTr\r\nhttps://drive.google.com/uc?export=download&id=1AHUm1-_V9GCtGuDcc8XrMUCJE8B-HHoL\r\nhttps://drive.google.com/uc?export=download&id=1CBrh-9OrSpKmPQBxTK_ji6mq6WTN_U9U\r\nhttps://drive.google.com/uc?export=download&id=1Ev4RqWcPsLI9rgOGAKh-_dFKqcEZ1u-G\r\nhttps://drive.google.com/uc?export=download&id=1GTHUJxxmjLmG2lnF9dwRgIDRFZaOY3-F\r\nhttps://drive.google.com/uc?export=download&id=1GcUN6mytEcOMBBOvjJOQzBmEkc-LdgQg\r\nhttps://drive.google.com/uc?export=download&id=1J3mucMFTWrgAYa3LuBZoLRR3CzzYD3fa\r\nhttps://drive.google.com/uc?export=download&id=1Jjhbal535VVz2ap4v4r_rN1UEHTdLK5P\r\nhttps://drive.google.com/uc?export=download&id=1L7aoUXzHPzyzQ0ns4ApBbYepsjFOtXil\r\nhttps://drive.google.com/uc?export=download&id=1M1M5yIOyjKWGprc3LUeVVwxgKXxgpqxm\r\nhttps://drive.google.com/uc?export=download&id=1Nug7-Sri50mkJL4GrWw6C2ZIbfeU-6Am\r\nhttps://drive.google.com/uc?export=download&id=1PGa8j1_IqxiGTc3SU6NMB38sAzxCPS34\r\nhttps://drive.google.com/uc?export=download&id=1QsV8C5EPJrQl37mwva_5-IJOrCaOi2tH\r\nhttps://drive.google.com/uc?export=download&id=1RsGLINVce-0GsDkCLDuLZmoLuzfmoCuQ\r\nhttps://drive.google.com/uc?export=download&id=1TuWH7uwu6V90QWmZn25qhou1rm97Egmn\r\nhttps://drive.google.com/uc?export=download&id=1U7WdBpd9kJ85S7BbBhWUSiy9NnXrKdO6\r\nhttps://drive.google.com/uc?export=download&id=1USoQ8lJgN8kAWnUnRrupMGrPMLlDVqlV\r\nhttps://drive.google.com/uc?export=download&id=1Uit4Og1pk-br_0UJIO5sdhApyhTuHzqo\r\nhttps://drive.google.com/uc?export=download&id=1Z2ty5hU0tIGRZRDlFQZLO7b5vijRfvo0\r\nhttps://drive.google.com/uc?export=download&id=1ZyFGufe4puX3vjGPbp4xg9Hca3Gwq22g\r\nhttps://drive.google.com/uc?export=download&id=1ZzlIQvw1KNBG97QQCfdatvVrrbeLaM1u\r\nhttps://drive.google.com/uc?export=download&id=1_AckYkinAnhqmRQtGsQgUKAnTHxxX5J0\r\nhttps://drive.google.com/uc?export=download&id=1__EjA6oZsgXQpggPm-h54jZu3kP6Y6zu\r\nhttps://drive.google.com/uc?export=download&id=1aHPVfC5TrlnUjehtagVZoDfq4VccgaNT\r\nhttps://drive.google.com/uc?export=download&id=1cqu_YAgvlyVSzzjcUyP1Cz7q0k8Pw7vN\r\nhttps://drive.google.com/uc?export=download&id=1dUIqVwvoZAtbX_-z5axCoe97XNcFo1No\r\nhttps://drive.google.com/uc?export=download&id=1eTtRs5cUlBP5dXsx-FTAlmXuB6JQi2qj\r\nhttps://drive.google.com/uc?export=download&id=1fUR3MqJ8jTMka6owA0S-Fe6aHmiophc_\r\nhttps://drive.google.com/uc?export=download&id=1ffWfITKFMJeqjT8loC8aiCLRNJpc_XnF\r\nhttps://drive.google.com/uc?export=download&id=1g89WgFHMRbr4QrvA0ngh26PY081Nv3lx\r\nhttps://drive.google.com/uc?export=download&id=1meSNZHxd_0TZLKCRCYGN-Ke3IA5c1qOE\r\nhttps://drive.google.com/uc?export=download&id=1okwGJiOZmTpNRNgJLCnjFF4Q0H1z4l6_\r\nhttps://drive.google.com/uc?export=download&id=1phryJg4FjCFkn0mSCqIOP2-FscAeKGV0\r\nhttps://drive.google.com/uc?export=download&id=1s8NSFT4Kz0caKZ4VybPNzt88F8ZanprY\r\nhttps://drive.google.com/uc?export=download&id=1vRY2wM6rlOZrf9exGTm5pXj5ExlVwJ0C\r\nhttps://drive.google.com/uc?export=download&id=1ytVZ4AhubFDOEL7o7XrIRIyhU8g9wvKA\r\nhttps://drive.google.com/uc?id=12Uz59TYg_NtxOy7SXraYeXPMRT7oaO7X\r\nhttps://drive.google.com/uc?id=1PGH5H_oW7wUvMw_5xaXvbEN7DFll-wDX\r\nhttps://github.com/MaazAmjad/Datasets-for-Urdu-news/blob/master/Urdu%20Fake%20News%20Dataset.zip?raw=true\r\nhttps://github.com/TevenLeScao/glucose/blob/master/GLUCOSE_training_data.zip?raw=true\r\nhttps://github.com/TevenLeScao/what-time-is-it/blob/master/gutenberg_time_phrases.zip?raw=true\r\nhttps://github.com/aviaefrat/cryptonite/blob/main/data/cryptonite-official-split.zip?raw=true\r\nhttps://github.com/facebookresearch/Imppres/blob/master/dataset/IMPPRES.zip?raw=true\r\nhttps://github.com/ljos/navnkjenner/blob/master/data/bokmaal/no_bokmaal-ud-train.bioes?raw=true\r\nhttps://github.com/ljos/navnkjenner/blob/master/data/nynorsk/no_nynorsk-ud-train.bioes?raw=true\r\nhttps://github.com/ljos/navnkjenner/blob/master/data/samnorsk/no_samnorsk-ud-train.bioes?raw=true\r\nhttps://github.com/mirfan899/Urdu/blob/master/sentiment/imdb_urdu_reviews.csv.tar.gz?raw=true\r\nhttps://github.com/omilab/Neural-Sentiment-Analyzer-for-Modern-Hebrew/blob/master/data/morph_train.tsv?raw=true\r\nhttps://github.com/omilab/Neural-Sentiment-Analyzer-for-Modern-Hebrew/blob/master/data/token_train.tsv?raw=true\r\nhttps://lindat.mff.cuni.cz/repository/xmlui/bitstream/handle/11858/00-097C-0000-0023-625F-0/hindencorp05.plaintext.gz?sequence=3&isAllowed=y\r\nhttps://repo.sadilar.org/bitstream/handle/20.500.12185/299/nchlt_afrikaans_named_entity_annotated_corpus.zip?sequence=3&isAllowed=y\r\nhttps://repo.sadilar.org/bitstream/handle/20.500.12185/312/nchlt_isixhosa_named_entity_annotated_corpus.zip?sequence=3&isAllowed=y\r\nhttps://repo.sadilar.org/bitstream/handle/20.500.12185/319/nchlt_isizulu_named_entity_annotated_corpus.zip?sequence=3&isAllowed=y\r\nhttps://repo.sadilar.org/bitstream/handle/20.500.12185/328/nchlt_sepedi_named_entity_annotated_corpus.zip?sequence=3&isAllowed=y\r\nhttps://repo.sadilar.org/bitstream/handle/20.500.12185/334/nchlt_sesotho_named_entity_annotated_corpus.zip?sequence=3&isAllowed=y\r\nhttps://repo.sadilar.org/bitstream/handle/20.500.12185/341/nchlt_setswana_named_entity_annotated_corpus.zip?sequence=3&isAllowed=y\r\nhttps://repo.sadilar.org/bitstream/handle/20.500.12185/346/nchlt_siswati_named_entity_annotated_corpus.zip?sequence=3&isAllowed=y\r\nhttps://www.dropbox.com/s/tohrsllcfy7rch4/SimpleQuestions_v2.tgz?dl=1\r\nhttps://zenodo.org/record/1043504/files/corpus-webis-tldr-17.zip?download=1\r\nhttps://zenodo.org/record/1489920/files/articles-training-byarticle-20181122.zip?download=1\r\nhttps://zenodo.org/record/1489920/files/articles-training-bypublisher-20181122.zip?download=1\r\nhttps://zenodo.org/record/2787612/files/SICK.zip?download=1\r\nhttps://zenodo.org/record/3553423/files/Swahili%20data.zip?download=1\r\nhttps://zenodo.org/record/3707949/files/tapaco_v1.0.zip?download=1\r\nhttps://zenodo.org/record/4300294/files/train.csv?download=1\r\n```\r\n\r\n",
"Hi @severo, I just saw your comment. Thank you.\r\n\r\nFinally I just swapped the 2 parsings: first I extract extension and then I remove query parameters. 😉 ",
"OK :) Maybe we should add some unit tests to ensure we improve the detection without regressions (it's Friday afternoon, I trust the unit tests more than my analysis of the code)",
"Great! For the tests, I think we should also add some URLs in the form: `http://ufal.ms.mff.cuni.cz/umc/005-en-ur/download.php?f=umc005-corpus.zip` to be sure they are still correctly detected."
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"CI fails due to missing tags, but they will be added in https://github.com/huggingface/datasets/pull/2949"
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This PR fixes it, allowing loading compressed/uncompressed CSV files in streaming/non-streaming mode.
Fix #2977. | {
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"wooo that was fast! thank you @lhoestq !\r\nit is able to process now, though it's ignoring all files and ending up with 0 examples now haha :/\r\n\r\nFor subset \"unfiltered\":\r\n```python\r\n>>> load_dataset(\"trivia_qa\", \"unfiltered\")\r\nDownloading and preparing dataset trivia_qa/unfiltered (download: 3.07 GiB, generated: 27.23 GiB, post-processed: Unknown size, total: 30.30 GiB) to /gpfsscratch/rech/six/commun/datasets/trivia_qa/unfiltered/1.1.0/910043a609bb2bdf62b4874f68e0c24fb648cf81e40a358f4bd54c919d72c9ab...\r\n100%|███████████████████████████████████████████████████████████████████████████████████████████████| 2/2 [00:00<00:00, 1354.53it/s]\r\n100%|█████████████████████████████████████████████████████████████████████████████████████████████████| 2/2 [00:00<00:00, 40.60it/s]\r\nTraceback (most recent call last):\r\n File \"<stdin>\", line 1, in <module>\r\n File \"/gpfswork/rech/six/commun/conda/victor/lib/python3.7/site-packages/datasets/load.py\", line 1198, in load_dataset\r\n use_auth_token=use_auth_token,\r\n File \"/gpfswork/rech/six/commun/conda/victor/lib/python3.7/site-packages/datasets/builder.py\", line 647, in download_and_prepare\r\n dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs\r\n File \"/gpfswork/rech/six/commun/conda/victor/lib/python3.7/site-packages/datasets/builder.py\", line 748, in _download_and_prepare\r\n verify_splits(self.info.splits, split_dict)\r\n File \"/gpfswork/rech/six/commun/conda/victor/lib/python3.7/site-packages/datasets/utils/info_utils.py\", line 74, in verify_splits\r\n raise NonMatchingSplitsSizesError(str(bad_splits))\r\ndatasets.utils.info_utils.NonMatchingSplitsSizesError: [{'expected': SplitInfo(name='test', num_bytes=2906575347, num_examples=10832, dataset_name='trivia_qa'), 'recorded': SplitInfo(name='test', num_bytes=0, num_examples=0, dataset_name='trivia_qa')}, {'expected': SplitInfo(name='validation', num_bytes=3038966234, num_examples=11313, dataset_name='trivia_qa'), 'recorded': SplitInfo(name='validation', num_bytes=0, num_examples=0, dataset_name='trivia_qa')}]\r\n```\r\nFor subset \"rc\":\r\n```python\r\n>>> load_dataset(\"trivia_qa\", \"rc\")\r\nDownloading and preparing dataset trivia_qa/rc (download: 2.48 GiB, generated: 14.92 GiB, post-processed: Unknown size, total: 17.40 GiB) to /gpfsscratch/rech/six/commun/datasets/trivia_qa/rc/1.1.0/910043a609bb2bdf62b4874f68e0c24fb648cf81e40a358f4bd54c919d72c9ab...\r\n100%|███████████████████████████████████████████████████████████████████████████████████████████████| 1/1 [00:00<00:00, 3806.08it/s]\r\n100%|█████████████████████████████████████████████████████████████████████████████████████████████████| 1/1 [00:00<00:00, 51.57it/s]\r\nTraceback (most recent call last):\r\n File \"<stdin>\", line 1, in <module>\r\n File \"/gpfswork/rech/six/commun/conda/victor/lib/python3.7/site-packages/datasets/load.py\", line 1198, in load_dataset\r\n use_auth_token=use_auth_token,\r\n File \"/gpfswork/rech/six/commun/conda/victor/lib/python3.7/site-packages/datasets/builder.py\", line 647, in download_and_prepare\r\n dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs\r\n File \"/gpfswork/rech/six/commun/conda/victor/lib/python3.7/site-packages/datasets/builder.py\", line 748, in _download_and_prepare\r\n verify_splits(self.info.splits, split_dict)\r\n File \"/gpfswork/rech/six/commun/conda/victor/lib/python3.7/site-packages/datasets/utils/info_utils.py\", line 74, in verify_splits\r\n raise NonMatchingSplitsSizesError(str(bad_splits))\r\ndatasets.utils.info_utils.NonMatchingSplitsSizesError: [{'expected': SplitInfo(name='test', num_bytes=1577814583, num_examples=17210, dataset_name='trivia_qa'), 'recorded': SplitInfo(name='test', num_bytes=0, num_examples=0, dataset_name='trivia_qa')}, {'expected': SplitInfo(name='train', num_bytes=12750976012, num_examples=138384, dataset_name='trivia_qa'), 'recorded': SplitInfo(name='train', num_bytes=0, num_examples=0, dataset_name='trivia_qa')}, {'expected': SplitInfo(name='validation', num_bytes=1688535379, num_examples=18669, dataset_name='trivia_qa'), 'recorded': SplitInfo(name='validation', num_bytes=0, num_examples=0, dataset_name='trivia_qa')}]\r\n```\r\n\r\nCould you look into that when you get a chance?\r\nI wonder if it's not something they changed on the file to download? i couldn't find any information",
"@VictorSanh have you tried passing `download_mode=\"force_redownload\"`?\r\n```python\r\nds = load_dataset(\"trivia_qa\", \"unfiltered\", download_mode=\"force_redownload\")\r\n```",
"I aggressively rmed caches, especially rming the `datasets/downloads/extracted/c3d265fa20d99a147a76e4f5e...` solved the issue.\r\nthank you both!\r\n"
] | 1,633,042,818,000 | 1,633,115,243,000 | 1,633,115,242,000 | MEMBER | null | null | null | ## Describe the bug
For some reason, I can't download `trivia_qa/unfilted`. A file seems to be missing... I am able to see it fine though the viewer tough...
## Steps to reproduce the bug
```python
>>> from datasets import load_dataset
>>> load_dataset("trivia_qa", "unfiltered")
Downloading and preparing dataset trivia_qa/unfiltered (download: 3.07 GiB, generated: 27.23 GiB, post-processed: Unknown size, total: 30.30 GiB) to /gpfsscratch/rech/six/commun/datasets/trivia_qa/unfiltered/1.1.0/9977a5d6f72acfd92f587de052403e8138b43bb0d1ce595016c3baf7e14deba6...
Traceback (most recent call last):
File "/gpfswork/rech/six/commun/modules/datasets_modules/datasets/trivia_qa/9977a5d6f72acfd92f587de052403e8138b43bb0d1ce595016c3baf7e14deba6/trivia_qa.py", line 251, in _add_context
with open(os.path.join(file_dir, fname), encoding="utf-8") as f:
FileNotFoundError: [Errno 2] No such file or directory: '/gpfsscratch/rech/six/commun/datasets/downloads/extracted/9fcb7eddc6afd46fd074af3c5128931dfe4b548f933c925a23847faf4c1995ad/evidence/wikipedia/Peanuts.txt'
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/gpfswork/rech/six/commun/conda/victor/lib/python3.7/site-packages/datasets/load.py", line 852, in load_dataset
use_auth_token=use_auth_token,
File "/gpfswork/rech/six/commun/conda/victor/lib/python3.7/site-packages/datasets/builder.py", line 616, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/gpfswork/rech/six/commun/conda/victor/lib/python3.7/site-packages/datasets/builder.py", line 693, in _download_and_prepare
self._prepare_split(split_generator, **prepare_split_kwargs)
File "/gpfswork/rech/six/commun/conda/victor/lib/python3.7/site-packages/datasets/builder.py", line 1107, in _prepare_split
disable=bool(logging.get_verbosity() == logging.NOTSET),
File "/gpfswork/rech/six/commun/conda/victor/lib/python3.7/site-packages/tqdm/std.py", line 1133, in __iter__
for obj in iterable:
File "/gpfswork/rech/six/commun/modules/datasets_modules/datasets/trivia_qa/9977a5d6f72acfd92f587de052403e8138b43bb0d1ce595016c3baf7e14deba6/trivia_qa.py", line 303, in _generate_examples
example = parse_example(article)
File "/gpfswork/rech/six/commun/modules/datasets_modules/datasets/trivia_qa/9977a5d6f72acfd92f587de052403e8138b43bb0d1ce595016c3baf7e14deba6/trivia_qa.py", line 274, in parse_example
_add_context(article.get("EntityPages", []), "WikiContext", wiki_dir),
File "/gpfswork/rech/six/commun/modules/datasets_modules/datasets/trivia_qa/9977a5d6f72acfd92f587de052403e8138b43bb0d1ce595016c3baf7e14deba6/trivia_qa.py", line 253, in _add_context
except (IOError, datasets.Value("errors").NotFoundError):
File "<string>", line 5, in __init__
File "/gpfswork/rech/six/commun/conda/victor/lib/python3.7/site-packages/datasets/features.py", line 265, in __post_init__
self.pa_type = string_to_arrow(self.dtype)
File "/gpfswork/rech/six/commun/conda/victor/lib/python3.7/site-packages/datasets/features.py", line 134, in string_to_arrow
f"Neither {datasets_dtype} nor {datasets_dtype + '_'} seems to be a pyarrow data type. "
ValueError: Neither errors nor errors_ seems to be a pyarrow data type. Please make sure to use a correct data type, see: https://arrow.apache.org/docs/python/api/datatypes.html#factory-functions
```
## Expected results
I am able to load another subset (`rc`), but unable to load.
I am not sure why the try/except doesn't catch it...
https://github.com/huggingface/datasets/blob/9675a5a1e7b99a86f9c250f6ea5fa5d1e6d5cc7d/datasets/trivia_qa/trivia_qa.py#L253
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.11.0
- Platform: Linux-4.18.0-147.51.2.el8_1.x86_64-x86_64-with-redhat-8.1-Ootpa
- Python version: 3.7.10
- PyArrow version: 3.0.0
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] | open | false | null | [] | null | [] | 1,633,008,121,000 | 1,633,008,121,000 | null | CONTRIBUTOR | null | null | null | Unless I'm mistaken, it seems that in the new documentation it is no longer mentioned that you can use Unix style pattern matching in the `data_files` argument of the `load_dataset` method.
This feature was mentioned [here](https://huggingface.co/docs/datasets/loading_datasets.html#from-a-community-dataset-on-the-hugging-face-hub) in the previous documentation.
I'd love to hear your opinion @lhoestq , @albertvillanova and @stevhliu | {
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} | This PR adds the Common Language dataset (https://zenodo.org/record/5036977)
The dataset is intended for language-identification speech classifiers and is already used by models on the Hub:
* https://huggingface.co/speechbrain/lang-id-commonlanguage_ecapa
* https://huggingface.co/anton-l/wav2vec2-base-langid
cc @patrickvonplaten | {
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"Hi ! Could you check the length of the `self.dataset` object (i.e. the Dataset object passed to the data loader) ? It looks like the dataset is empty.\r\nNot sure why the SWA optimizer would cause this though.",
"Any updates on this? \r\nThe same error occurred to me too when running `cardiffnlp/twitter-roberta-base-sentiment` on a custom dataset. This happened when I tried to do `model = torch.nn.DataParallel(model, device_ids=[0, 1, 2, 3])` without using sagemaker distribution. \r\nPython: 3.6.13\r\ndatasets: 1.6.2",
"Hi @ruisi-su, do you have this issue while using SWA as well, or just data parallel ?\r\n\r\nIf you have a code example to reproduce this issue it would also be helpful",
"@lhoestq I had this issue without SWA. I followed [this](https://github.com/huggingface/notebooks/blob/master/sagemaker/03_distributed_training_data_parallelism/sagemaker-notebook.ipynb) notebook to utilize multiple gpus on the [roberta-base](https://huggingface.co/cardiffnlp/twitter-roberta-base-sentiment) model. This tutorial could only work if I am on `ml.p3.16xlarge`, which I don't have access to. So I tried using just `model = torch.nn.DataParallel(model, device_ids=[0, 1, 2, 3]` before calling `trainer.fit()`. But maybe this is not the right way to do distributed training. I can provide a code example if that will be more helpful.",
"It might be an issue with old versions of `datasets`, can you try updating `datasets` ?",
"FYI I encountered the exact same error using the latest versions of `datasets`, `transformers` and `pyarrow`, without using any kind of SWA or dataparallel: \r\n\r\n```\r\n# packages in environment at C:\\Users\\zhang\\mambaforge:\r\n#\r\n# Name Version Build Channel\r\ncudatoolkit 11.0.3 h3f58a73_9 https://mirrors.ustc.edu.cn/anaconda/cloud/conda-forge\r\ndatasets 1.17.0 pypi_0 pypi\r\npyarrow 6.0.1 pypi_0 pypi\r\npytorch 1.7.1 py3.9_cuda110_cudnn8_0 pytorch\r\ntornado 6.1 py39hb82d6ee_2 https://mirrors.ustc.edu.cn/anaconda/cloud/conda-forge\r\n```\r\n\r\n```\r\n> python --version\r\n> 3.9.7\r\n```",
"Same error here! Datasets version `1.18.3` freshly updated.\r\n\r\n`IndexError: Invalid key: 90 is out of bounds for size 0`\r\n\r\nMy task is finetuning the model for token classification.\r\n\r\n**Solved**: I make a mistake while updating the dataset during the map, you should check that you return the correct values.\r\n",
"cc @sgugger This probably comes from the `Trainer` removing all the columns of a dataset, do you think we can improve the error message in this case ?",
"The `Trainer` clearly logs when it removes columns in the dataset. I'm not too sure of where the bug appears as I haven't seen a clear reproducer. Happy to display a more helpful error message, but I'd need a reproducer to see what the exact problem is to design the right test and warning :-) ",
"Well, if I can try to suggest how to reproduce, please try by do not returning any updated content in the map function used to tokenize input (e.g., in TokenClassification). I can leave here my wrong version for reference:\r\n\r\n```python\r\ndef preprocess_function(examples):\r\n\r\n text = examples[\"text\"]\r\n \r\n inputs = tokenizer(\r\n text,\r\n max_length=512,\r\n truncation=\"only_second\",\r\n return_offsets_mapping=True,\r\n padding=\"max_length\",\r\n )\r\n\r\n offset_mapping = inputs.pop(\"offset_mapping\")\r\n # ... processing code\r\n\r\n inputs[\"labels\"] = label_ids\r\n #return inputs\r\n \r\ntrain_ds = train_ds.map(preprocess_function, batched=False)\r\ntest_ds = test_ds.map(preprocess_function, batched=False)\r\neval_ds = eval_ds.map(preprocess_function, batched=False)\r\n```\r\n\r\nOf course, returning inputs solved the problem. As suggestion, a possible error message could display \"IndexError: the `key` required by trainer are not found in the dataset\" (just an hypothesis, I think there could be something better). \r\n\r\nPlease tell me if you need more details to reproduce, glad to help!",
"That's the thing though. The `Trainer` has no idea which inputs are required or not since all models can have different kinds of inputs, and it can work for models outside of the Transformers library. I can add a clear error message if I get an empty batch, as this is easy to detect, but that's pretty much it.",
"I think that it could be enough to ease the identification of the problem.",
"Done in [this commit](https://github.com/huggingface/transformers/commit/c87cfd653c4de3d4743a9ae09d749282d94d5829)"
] | 1,632,931,464,000 | 1,649,602,189,000 | 1,649,602,189,000 | NONE | null | null | null | ## Describe the bug
A clear and concise description of what the bug is.
Hi. I am trying to implement stochastic weighted averaging optimizer with transformer library as described here https://pytorch.org/blog/pytorch-1.6-now-includes-stochastic-weight-averaging/ , for this I am using a run_clm.py codes which is working fine before adding SWA optimizer, the moment I modify the model with `swa_model = AveragedModel(model)` in this script, I am getting the below error, since I am NOT touching the dataloader part, I am confused why this is occurring, I very much appreciate your opinion on this @lhoestq
## Steps to reproduce the bug
```
Traceback (most recent call last):
File "run_clm.py", line 723, in <module>
main()
File "run_clm.py", line 669, in main
train_result = trainer.train(resume_from_checkpoint=checkpoint)
File "/user/dara/libs/anaconda3/envs/success/lib/python3.7/site-packages/transformers/trainer.py", line 1258, in train
for step, inputs in enumerate(epoch_iterator):
File "/user/dara/libs/anaconda3/envs/success/lib/python3.7/site-packages/torch/utils/data/dataloader.py", line 435, in __next__
data = self._next_data()
File "/user/dara/libs/anaconda3/envs/success/lib/python3.7/site-packages/torch/utils/data/dataloader.py", line 475, in _next_data
data = self._dataset_fetcher.fetch(index) # may raise StopIteration
File "/user/dara/libs/anaconda3/envs/success/lib/python3.7/site-packages/torch/utils/data/_utils/fetch.py", line 44, in fetch
data = [self.dataset[idx] for idx in possibly_batched_index]
File "/user/dara/libs/anaconda3/envs/success/lib/python3.7/site-packages/torch/utils/data/_utils/fetch.py", line 44, in <listcomp>
data = [self.dataset[idx] for idx in possibly_batched_index]
File "/user/dara/libs/anaconda3/envs/success/lib/python3.7/site-packages/datasets/arrow_dataset.py", line 1530, in __getitem__
format_kwargs=self._format_kwargs,
File "/user/dara/libs/anaconda3/envs/success/lib/python3.7/site-packages/datasets/arrow_dataset.py", line 1517, in _getitem
pa_subtable = query_table(self._data, key, indices=self._indices if self._indices is not None else None)
File "/user/dara/libs/anaconda3/envs/success/lib/python3.7/site-packages/datasets/formatting/formatting.py", line 368, in query_table
_check_valid_index_key(key, size)
File "/user/dara/libs/anaconda3/envs/success/lib/python3.7/site-packages/datasets/formatting/formatting.py", line 311, in _check_valid_index_key
raise IndexError(f"Invalid key: {key} is out of bounds for size {size}")
IndexError: Invalid key: 14 is out of bounds for size 0
```
## Expected results
not getting the index error
## Actual results
Please see the above
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: datasets 1.12.1
- Platform: linux
- Python version: 3.7.11
- PyArrow version: 5.0.0
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https://api.github.com/repos/huggingface/datasets/issues/2987 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/2987/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/2987/comments | https://api.github.com/repos/huggingface/datasets/issues/2987/events | https://github.com/huggingface/datasets/issues/2987 | 1,011,026,141 | I_kwDODunzps48Qwjd | 2,987 | ArrowInvalid: Can only convert 1-dimensional array values | {
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"Hi @NielsRogge, thanks for reporting!\r\n\r\nIn `datasets`, we were handling N-dimensional arrays only when passed as an instance of `np.array`, not when passed as a list of `np.array`s.\r\n\r\nI'm fixing it."
] | 1,632,925,132,000 | 1,633,096,665,000 | 1,633,096,665,000 | CONTRIBUTOR | null | null | null | ## Describe the bug
For the ViT and LayoutLMv2 demo notebooks in my [Transformers-Tutorials repo](https://github.com/NielsRogge/Transformers-Tutorials), people reported an ArrowInvalid issue after applying the following function to a Dataset:
```
def preprocess_data(examples):
images = [Image.open(path).convert("RGB") for path in examples['image_path']]
words = examples['words']
boxes = examples['bboxes']
word_labels = examples['ner_tags']
encoded_inputs = processor(images, words, boxes=boxes, word_labels=word_labels,
padding="max_length", truncation=True)
return encoded_inputs
```
```
Full trace:
---------------------------------------------------------------------------
ArrowInvalid Traceback (most recent call last)
<ipython-input-8-0fc3efc6f0c2> in <module>()
27
28 train_dataset = datasets['train'].map(preprocess_data, batched=True, remove_columns=datasets['train'].column_names,
---> 29 features=features)
30 test_dataset = datasets['test'].map(preprocess_data, batched=True, remove_columns=datasets['test'].column_names,
31 features=features)
13 frames
/usr/local/lib/python3.7/dist-packages/datasets/arrow_dataset.py in map(self, function, with_indices, input_columns, batched, batch_size, drop_last_batch, remove_columns, keep_in_memory, load_from_cache_file, cache_file_name, writer_batch_size, features, disable_nullable, fn_kwargs, num_proc, suffix_template, new_fingerprint, desc)
1701 new_fingerprint=new_fingerprint,
1702 disable_tqdm=disable_tqdm,
-> 1703 desc=desc,
1704 )
1705 else:
/usr/local/lib/python3.7/dist-packages/datasets/arrow_dataset.py in wrapper(*args, **kwargs)
183 }
184 # apply actual function
--> 185 out: Union["Dataset", "DatasetDict"] = func(self, *args, **kwargs)
186 datasets: List["Dataset"] = list(out.values()) if isinstance(out, dict) else [out]
187 # re-apply format to the output
/usr/local/lib/python3.7/dist-packages/datasets/fingerprint.py in wrapper(*args, **kwargs)
396 # Call actual function
397
--> 398 out = func(self, *args, **kwargs)
399
400 # Update fingerprint of in-place transforms + update in-place history of transforms
/usr/local/lib/python3.7/dist-packages/datasets/arrow_dataset.py in _map_single(self, function, with_indices, input_columns, batched, batch_size, drop_last_batch, remove_columns, keep_in_memory, load_from_cache_file, cache_file_name, writer_batch_size, features, disable_nullable, fn_kwargs, new_fingerprint, rank, offset, disable_tqdm, desc, cache_only)
2063 writer.write_table(batch)
2064 else:
-> 2065 writer.write_batch(batch)
2066 if update_data and writer is not None:
2067 writer.finalize() # close_stream=bool(buf_writer is None)) # We only close if we are writing in a file
/usr/local/lib/python3.7/dist-packages/datasets/arrow_writer.py in write_batch(self, batch_examples, writer_batch_size)
409 typed_sequence = OptimizedTypedSequence(batch_examples[col], type=col_type, try_type=col_try_type, col=col)
410 typed_sequence_examples[col] = typed_sequence
--> 411 pa_table = pa.Table.from_pydict(typed_sequence_examples)
412 self.write_table(pa_table, writer_batch_size)
413
/usr/local/lib/python3.7/dist-packages/pyarrow/table.pxi in pyarrow.lib.Table.from_pydict()
/usr/local/lib/python3.7/dist-packages/pyarrow/array.pxi in pyarrow.lib.asarray()
/usr/local/lib/python3.7/dist-packages/pyarrow/array.pxi in pyarrow.lib.array()
/usr/local/lib/python3.7/dist-packages/pyarrow/array.pxi in pyarrow.lib._handle_arrow_array_protocol()
/usr/local/lib/python3.7/dist-packages/datasets/arrow_writer.py in __arrow_array__(self, type)
106 storage = numpy_to_pyarrow_listarray(self.data, type=type.value_type)
107 else:
--> 108 storage = pa.array(self.data, type.storage_dtype)
109 out = pa.ExtensionArray.from_storage(type, storage)
110 elif isinstance(self.data, np.ndarray):
/usr/local/lib/python3.7/dist-packages/pyarrow/array.pxi in pyarrow.lib.array()
/usr/local/lib/python3.7/dist-packages/pyarrow/array.pxi in pyarrow.lib._sequence_to_array()
/usr/local/lib/python3.7/dist-packages/pyarrow/error.pxi in pyarrow.lib.pyarrow_internal_check_status()
/usr/local/lib/python3.7/dist-packages/pyarrow/error.pxi in pyarrow.lib.check_status()
ArrowInvalid: Can only convert 1-dimensional array values
```
It can be fixed by adding the following line:
```diff
def preprocess_data(examples):
images = [Image.open(path).convert("RGB") for path in examples['image_path']]
words = examples['words']
boxes = examples['bboxes']
word_labels = examples['ner_tags']
encoded_inputs = processor(images, words, boxes=boxes, word_labels=word_labels,
padding="max_length", truncation=True)
+ encoded_inputs["image"] = np.array(encoded_inputs["image"])
return encoded_inputs
```
However, would be great if this can be fixed within Datasets itself. | {
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https://api.github.com/repos/huggingface/datasets/issues/2986 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/2986/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/2986/comments | https://api.github.com/repos/huggingface/datasets/issues/2986/events | https://github.com/huggingface/datasets/pull/2986 | 1,010,792,783 | PR_kwDODunzps4scSHR | 2,986 | Refac module factory + avoid etag requests for hub datasets | {
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"> One thing is that I still don't know at what extent we want to keep backward compatibility for prepare_module. For now I just kept it (except I removed two parameters) just in case, but it's not used anywhere anymore.\r\n\r\nFYI, various other projects currently use it, thus clearly a major version would be required:\r\n\r\nhttps://github.com/search?q=org%3Ahuggingface+prepare_module&type=code",
"Yea so I kept `prepare_module` and changed it to use all the factories I added, so all the use cases in the link you shared are still working. The only two parameters I removed are minor IMO and were a bit hacky anyway (return_resolved_file_path and return_associated_base_path). I think they were only used internally in `datasets` but let me know if you're aware of a use case I didn't think of.",
"I think I'm done with the tests :) I'll do the comments/docs and then we just wait for https://github.com/huggingface/huggingface_hub/pull/373 to get merged",
"When there's a new release of `huggingface_hub` (probably on monday), it will fix the CI.\r\n\r\nThe PR is ready for review. Let me know if I need to clarify some parts",
"One additional change I did: the tests won't affect the number of downloads on the website anymore. And users can choose to not update the number of downloads with `HF_UPDATE_DOWNLOAD_COUNTS=0`",
"CI failures are simply due to RAM issues with circleci workers.\r\nAnd on windows there is an issue with installing `ruamel.yaml` from the bump of `huggingface_hub` (fixed on master)"
] | 1,632,912,120,000 | 1,633,950,353,000 | 1,633,950,352,000 | MEMBER | null | false | {
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} | ## Refactor the module factory
When trying to extend the `data_files` logic to avoid doing unnecessary ETag requests, I noticed that the module preparation mechanism needed a refactor:
- the function was 600 lines long
- it was not readable
- it contained many different cases that made it complex to maintain
- it was hard to properly test it
- it was hard to extend without breaking anything
The module preparation mechanism is in charge of taking the name of a dataset or a metric given by the user (ex: "squad", "accuracy", "lhoestq/test", "path/to/my/script.py", "path/to/my/data/directory", "json", "csv") and return a module (possibly downloaded from the Hub) that contains the dataset builder or the metric class to use.
### Implementation details
I decided to separate all these use cases into different dataset/metric module factories.
First, the metric module factories:
- **CanonicalMetricModuleFactory**: "accuracy", "rouge", ...
- **LocalMetricModuleFactory**: "path/to/my/metric.py"
Then, the dataset module factories:
- **CanonicalDatasetModuleFactory**: "squad", "glue", ...
- **CommunityDatasetModuleFactoryWithScript**: "lhoestq/test"
- **CommunityDatasetModuleFactoryWithoutScript**: "lhoestq/demo1"
- **PackagedDatasetModuleFactory**: "json", "csv", ...
- **LocalDatasetModuleFactoryWithScript**: "path/to/my/script.py"
- **LocalDatasetModuleFactoryWithoutScript**: "path/to/my/data/directory"
And finally, additional factories when users have no internet:
- **CachedDatasetModuleFactory**
- **CachedMetricModuleFactory**
### Breaking changes
One thing is that I still don't know at what extent we want to keep backward compatibility for `prepare_module`. For now I just kept it (except I removed two parameters) just in case, but it's not used anywhere anymore.
## Avoid etag requests for hub datasets
To do this I added a class `DataFilesDict` that can be hashed to define the cache directory of the dataset.
It contains the usual data files formatted as `{"train": ["train.txt"]}` for example.
But each list of file is a `DataFilesList` that also has a `origin_metadata` attribute that contains metadata about the origin of each file:
- for URLs: it stores the ETags of the files
- for local files: it stores the last modification data
- for files from a Hugging Face repository on the Hub: it stores the pattern (`*`, `*.csv`, "train.txt", etc.) and the commit sha of the repository (so there're no ETag requests !)
This way if any file changes, the hash of the `DataFilesDict` changes too !
You can instantiate a `DataFilesDict` by using patterns for local/remote files or files in a HF repository:
- for local/remote files: `DataFilesDict.from_local_or_remote(patterns)`
- for files in a HF repository: `DataFilesDict.from_hf_repo(patterns, dataset_info)`
Fix #2859
## TODO
Fix the latest test:
- [x] fix the call to dataset_info in offline mode (related to https://github.com/huggingface/huggingface_hub/issues/372)
Add some more tests:
- [x] test all the factories
- [x] test the new data files logic
Other:
- [x] docstrings
- [x] comments | {
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https://api.github.com/repos/huggingface/datasets/issues/2985 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/2985/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/2985/comments | https://api.github.com/repos/huggingface/datasets/issues/2985/events | https://github.com/huggingface/datasets/pull/2985 | 1,010,500,433 | PR_kwDODunzps4sbbbo | 2,985 | add new dataset kan_hope | {
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} | ## Adding a Dataset
- **Name:** *KanHope*
- **Description:** *A code-mixed English-Kannada dataset for Hope speech detection*
- **Task:** *Binary Text Classification*
- **Paper:** *https://arxiv.org/abs/2108.04616*
- **Data:** *https://github.com/adeepH/kan_hope/tree/main/dataset*
- **Motivation:** *The dataset is amongst the very few resources available for code-mixed low-resourced Dravidian languages of India* | {
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"Hi @zijwang, thanks for reporting this issue.\r\n\r\nYou did not mention which `datasets` version you are using, but looking at the code in the stack trace, it seems you are using an old version.\r\n\r\nCould you please update `datasets` (`pip install -U datasets`) and check if the problem persists?"
] | 1,632,890,962,000 | 1,634,018,742,000 | 1,634,018,742,000 | NONE | null | null | null | ## Describe the bug
A clear and concise description of what the bug is.
When using `load_dataset` with json files, if the files are too large, there will be "Exceeded maximum rows" error.
## Steps to reproduce the bug
```python
dataset = load_dataset('json', data_files=data_files) # data files have 3M rows in a single file
```
## Expected results
No error
## Actual results
```
~/anaconda3/envs/python/lib/python3.9/site-packages/datasets/packaged_modules/json/json.py in _generate_tables(self, files)
134 with open(file, encoding="utf-8") as f:
--> 135 dataset = json.load(f)
136 except json.JSONDecodeError:
~/anaconda3/envs/python/lib/python3.9/json/__init__.py in load(fp, cls, object_hook, parse_float, parse_int, parse_constant, object_pairs_hook, **kw)
292 """
--> 293 return loads(fp.read(),
294 cls=cls, object_hook=object_hook,
~/anaconda3/envs/python/lib/python3.9/json/__init__.py in loads(s, cls, object_hook, parse_float, parse_int, parse_constant, object_pairs_hook, **kw)
345 parse_constant is None and object_pairs_hook is None and not kw):
--> 346 return _default_decoder.decode(s)
347 if cls is None:
~/anaconda3/envs/python/lib/python3.9/json/decoder.py in decode(self, s, _w)
339 if end != len(s):
--> 340 raise JSONDecodeError("Extra data", s, end)
341 return obj
JSONDecodeError: Extra data: line 2 column 1 (char 20321)
During handling of the above exception, another exception occurred:
ArrowInvalid Traceback (most recent call last)
<ipython-input-20-ab3718a6482f> in <module>
----> 1 dataset = load_dataset('json', data_files=data_files)
~/anaconda3/envs/python/lib/python3.9/site-packages/datasets/load.py in load_dataset(path, name, data_dir, data_files, split, cache_dir, features, download_config, download_mode, ignore_verifications, keep_in_memory, save_infos, script_version, use_auth_token, task, streaming, **config_kwargs)
841
842 # Download and prepare data
--> 843 builder_instance.download_and_prepare(
844 download_config=download_config,
845 download_mode=download_mode,
~/anaconda3/envs/python/lib/python3.9/site-packages/datasets/builder.py in download_and_prepare(self, download_config, download_mode, ignore_verifications, try_from_hf_gcs, dl_manager, base_path, use_auth_token, **download_and_prepare_kwargs)
606 logger.warning("HF google storage unreachable. Downloading and preparing it from source")
607 if not downloaded_from_gcs:
--> 608 self._download_and_prepare(
609 dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
610 )
~/anaconda3/envs/python/lib/python3.9/site-packages/datasets/builder.py in _download_and_prepare(self, dl_manager, verify_infos, **prepare_split_kwargs)
684 try:
685 # Prepare split will record examples associated to the split
--> 686 self._prepare_split(split_generator, **prepare_split_kwargs)
687 except OSError as e:
688 raise OSError(
~/anaconda3/envs/python/lib/python3.9/site-packages/datasets/builder.py in _prepare_split(self, split_generator)
1153 generator = self._generate_tables(**split_generator.gen_kwargs)
1154 with ArrowWriter(features=self.info.features, path=fpath) as writer:
-> 1155 for key, table in utils.tqdm(
1156 generator, unit=" tables", leave=False, disable=bool(logging.get_verbosity() == logging.NOTSET)
1157 ):
~/anaconda3/envs/python/lib/python3.9/site-packages/datasets/packaged_modules/json/json.py in _generate_tables(self, files)
135 dataset = json.load(f)
136 except json.JSONDecodeError:
--> 137 raise e
138 raise ValueError(
139 f"Not able to read records in the JSON file at {file}. "
~/anaconda3/envs/python/lib/python3.9/site-packages/datasets/packaged_modules/json/json.py in _generate_tables(self, files)
114 while True:
115 try:
--> 116 pa_table = paj.read_json(
117 BytesIO(batch), read_options=paj.ReadOptions(block_size=block_size)
118 )
~/anaconda3/envs/python/lib/python3.9/site-packages/pyarrow/_json.pyx in pyarrow._json.read_json()
~/anaconda3/envs/python/lib/python3.9/site-packages/pyarrow/error.pxi in pyarrow.lib.pyarrow_internal_check_status()
~/anaconda3/envs/python/lib/python3.9/site-packages/pyarrow/error.pxi in pyarrow.lib.check_status()
ArrowInvalid: Exceeded maximum rows
```
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version:
- Platform: Linux
- Python version: 3.9
- PyArrow version: 4.0.1
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"Opening this up - Here's whats left to make it really shine:\r\n- [ ] Update dataset card (this is being worked on by the author)\r\n- [ ] Add `dataset_info.json`. Requires downloading the entire dataset. I believe @lhoestq mentioned he may have a machine he's using for this sort of thing.\r\n\r\nI think both of these _could_ be done in separate PRs, but I'm not picky either way.\r\n\r\nAlso, we may find that users (and/or the authors) would like additional configurations for languages, image only, embeddings only, etc. I think we can wait and see what the community says on this and address in different PR.",
"Finally got around to this PR, sorry for the delay!\r\n\r\nI added some minimal info to the dataset card so we can at least have it on the hub and work more on it later.\r\n\r\nUnfortunately, this re-triggered the tests and it looks like we need a rebase? cc @nateraw ",
"Yea we need to rebase. Also I think it would be best to update the features to all be strings to match the original datasets format. I ran into a lot of issues with incorrect data types deep into the Dataset info Json process because it couldn't cast correctly. \n\nI mentioned this to @mariosasko - he might pick up this PR if I don't have bandwidth to finish soon. ",
"> I think this is a clear occasion to start supporting \"canonical\" datasets:\r\n> - without dataset_infos.json file\r\n> - without dummy data\r\n\r\nI agree we can support datasets without them. However the dataset_infos.json file can at least be **highly encouraged** since it has very nice info about the size of the dataset in MB and in number of examples, and it also helps guaranteeing the integrity of the dataset when it's downloaded (verification of the file checksums and the split sizes).",
"This dataset now lives here: https://huggingface.co/datasets/wikimedia/wit_base. @nateraw @yjernite Thanks for the initial work."
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} | Resolves #2902 based on conversation there - would also close #2810. Open to suggestions/help 😀
CC @hassiahk @lhoestq @yjernite | {
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"Whoever handles this just needs to: \r\n\r\n- [ ] fork the HuggingFace Datasets repo\r\n- [ ] update the [existing dataset script](https://github.com/huggingface/datasets/blob/master/datasets/openslr/openslr.py) to add SLR25. Lots of copypasting from other sections of the script should make that easy. \r\nAmharic URL: https://www.openslr.org/resources/25/data_readspeech_am.tar.bz2. \r\nSwahili URL: https://www.openslr.org/resources/25/data_broadcastnews_sw.tar.bz2, \r\nWolof URL: https://www.openslr.org/resources/25/data_readspeech_wo.tar.bz2\r\n- [ ] update the [data card](https://github.com/huggingface/datasets/blob/master/datasets/openslr/README.md) to include information about SLR25. There's lots of other examples to draw from. \r\n- [ ] add the appropriate language tags to the data card as well. https://www.w3.org/International/questions/qa-choosing-language-tags, or just use `sw`, `am`, and `wo` for consistency. \r\n- [ ] make a pull request to merge your changes back into HuggingFace's repo",
"... also the example in \"use in datasets library\" should be updated. It currently says \r\n![image](https://user-images.githubusercontent.com/4109253/135115980-8583a44a-cae6-4121-b699-00667020849f.png)\r\nBut you actually have to specify a subset, e.g. \r\n```python\r\ndataset = load_dataset(\"openslr\", \"SLR32\")\r\n```",
"![image](https://user-images.githubusercontent.com/4109253/135116070-82d4e732-b7b3-4c5b-bd4e-a40d8ccabb0e.png)\r\n\r\n"
] | 1,632,841,476,000 | 1,632,936,314,000 | null | CONTRIBUTOR | null | null | null | ## Adding a Dataset
- **Name:** *SLR25*
- **Description:** *Subset 25 from OpenSLR. Other subsets have been added to https://huggingface.co/datasets/openslr, 25 covers Amharic, Swahili and Wolof data*
- **Paper:** *https://www.openslr.org/25/ has citations for each of the three subsubsets. *
- **Data:** *Currently the three links to the .tar.bz2 files can be found a thttps://www.openslr.org/25/*
- **Motivation:** *Increase ASR data for underrepresented African languages. Also, other subsets of OpenSLR speech recognition have been uploaded, so this would be easy.*
https://github.com/huggingface/datasets/blob/master/datasets/openslr/openslr.py already has been created for various other OpenSLR subsets, this should be relatively straightforward to do.
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https://api.github.com/repos/huggingface/datasets/issues/2979 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/2979/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/2979/comments | https://api.github.com/repos/huggingface/datasets/issues/2979/events | https://github.com/huggingface/datasets/issues/2979 | 1,009,634,147 | I_kwDODunzps48Lctj | 2,979 | ValueError when computing f1 metric with average None | {
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"Hi @asofiaoliveira, thanks for reporting.\r\n\r\nI'm fixing it."
] | 1,632,828,893,000 | 1,633,097,858,000 | 1,633,097,858,000 | CONTRIBUTOR | null | null | null | ## Describe the bug
When I try to compute the f1 score for each class in a multiclass classification problem, I get a ValueError. The same happens with recall and precision. I traced the error to the `.item()` in these scripts, which is probably there for the other averages. E.g. from f1.py:
```python
return {
"f1": f1_score(
references,
predictions,
labels=labels,
pos_label=pos_label,
average=average,
sample_weight=sample_weight,
).item(),
}
```
Since the result is an array with more than one item, the `.item()` throws the error. I didn't submit a PR because this might be needed for the other averages, I'm not very familiar with the library
## Steps to reproduce the bug
```python
from datasets import load_metric
metric = load_metric("f1")
metric.add_batch(predictions=[2,34,1,34,1,2,3], references=[23,52,1,3,523,5,8])
metric.compute(average=None)
```
## Expected results
`array([0.66666667, 0. , 0. , 0. , 0. ,
0. , 0. , 0. , 0. ])`
## Actual results
ValueError: can only convert an array of size 1 to a Python scalar
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.12.1
- Platform: Windows-10-10.0.19041-SP0
- Python version: 3.9.5
- PyArrow version: 5.0.0
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"Hey @albertvillanova could you provide more context, including extracts from the discussion we had ?\r\n\r\nLet's ping @Pierrci @julien-c and @n1t0 for their opinion about that",
"@julien-c increased the huggingface.co production workers in order to see if it solve [the 502 you had this morning](https://app.circleci.com/pipelines/github/huggingface/datasets/7843/workflows/fc83fa32-18f5-4dc3-9e2f-ba277ae1af74)\r\n\r\nFor the decision process: be aware that moon-staging does not have persistent repos (they are deleted regularly). as a consequence, **if the moon-staging solution is validated**, you should consider a way to keep the repository that are loaded in tests. These are the ones I found : https://github.com/huggingface/datasets/blob/d488db2f64f312f88f72bbc57a09b7eddb329182/tests/test_load.py and https://github.com/huggingface/datasets/blob/40773111c3e7db8a992fa1c48af32d900a1018d6/tests/test_streaming_download_manager."
] | 1,632,822,086,000 | 1,632,842,630,000 | null | MEMBER | null | null | null | Currently, the CI test suite performs requests to the HF production server.
As discussed with @elishowk, we should refactor our tests to use the HF staging server instead, like `huggingface_hub` and `transformers`. | {
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https://api.github.com/repos/huggingface/datasets/issues/2977 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/2977/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/2977/comments | https://api.github.com/repos/huggingface/datasets/issues/2977/events | https://github.com/huggingface/datasets/issues/2977 | 1,009,378,692 | I_kwDODunzps48KeWE | 2,977 | Impossible to load compressed csv | {
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"Hi @Valahaar, thanks for reporting and for your investigation about the source cause.\r\n\r\nYou are right and that commit prevents `pandas` from inferring the compression. On the other hand, @lhoestq did that change to support loading that dataset in streaming mode. \r\n\r\nI'm fixing it."
] | 1,632,813,534,000 | 1,633,103,596,000 | 1,633,103,595,000 | CONTRIBUTOR | null | null | null | ## Describe the bug
It is not possible to load from a compressed csv anymore.
## Steps to reproduce the bug
```python
load_dataset('csv', data_files=['/path/to/csv.bz2'])
```
## Problem and possible solution
This used to work, but the commit that broke it is [this one](https://github.com/huggingface/datasets/commit/ad489d4597381fc2d12c77841642cbeaecf7a2e0#diff-6f60f8d0552b75be8b3bfd09994480fd60dcd4e7eb08d02f721218c3acdd2782).
`pandas` usually gets the compression information from the filename itself (which was previously directly passed). Now, since it gets a file descriptor, it might be good to auto-infer the compression or let the user pass the `compression` kwarg to `load_dataset` (or maybe warn the user if the file ends with a commonly known compression scheme?).
## Environment info
- `datasets` version: 1.10.0 (and over)
- Platform: Linux-5.8.0-45-generic-x86_64-with-glibc2.17
- Python version: 3.8.10
- PyArrow version: 3.0.0
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"Hi @mskovalova, \r\n\r\nSome datasets have multiple configurations. Therefore, in order to load them, you have to specify both the *dataset name* and the *configuration name*.\r\n\r\nIn the error message you got, you have a usage example:\r\n- To load the 'wikitext-103-raw-v1' configuration of the 'wikitext' dataset, you should use: \r\n ```python\r\n load_dataset('wikitext', 'wikitext-103-raw-v1')\r\n ```\r\n\r\nIn your case, if you would like to load the 'wikitext-2-v1' configuration of the 'wikitext' dataset, please use:\r\n```python\r\nraw_datasets = load_dataset(\"wikitext\", \"wikitext-2-v1\")\r\n```",
"Hi, if I want to load the dataset from local file, then how to specify the configuration name?"
] | 1,632,778,694,000 | 1,669,885,949,000 | 1,632,811,981,000 | NONE | null | null | null | I'm trying to load a wikitext dataset
```
from datasets import load_dataset
raw_datasets = load_dataset("wikitext")
```
ValueError: Config name is missing.
Please pick one among the available configs: ['wikitext-103-raw-v1', 'wikitext-2-raw-v1', 'wikitext-103-v1', 'wikitext-2-v1']
Example of usage:
`load_dataset('wikitext', 'wikitext-103-raw-v1')`.
If I try
```
from datasets import load_dataset
raw_datasets = load_dataset("wikitext-2-v1")
```
FileNotFoundError: Couldn't find file at https://raw.githubusercontent.com/huggingface/datasets/1.12.1/datasets/wikitext-2-v1/wikitext-2-v1.py
#### Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.12.1
- Platform: Linux-5.4.104+-x86_64-with-Ubuntu-18.04-bionic (colab)
- Python version: 3.7.12
- PyArrow version: 3.0.0
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Added the `dataset_infos.json` to the ignored files list and also added check to ignore files which have parent directory as `dummy`.
Let me know if it is correct. Thanks :) | {
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@lhoestq I'm sorry >.> | {
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"Maybe we can change the disk space calculating API from `shutil.disk_usage` to `os.statvfs` in UNIX-like system, which can provide correct results.\r\n```\r\nstatvfs = os.statvfs('path')\r\navail_space_bytes = statvfs.f_frsize * statvfs.f_bavail\r\n```",
"Hi @qqaatw, thanks for reporting.\r\n\r\nCould you please try:\r\n```python\r\ndataset = load_dataset(\"natural_questions\", cache_dir=os.path.abspath(args.dataset_cache_dir))\r\n```",
"@albertvillanova it works! Thanks for your suggestion. Is that a bug of `DownloadConfig`?",
"`DownloadConfig` only sets the location to download the files. On the other hand, `cache_dir` sets the location for both downloading and caching the data. You can find more information here: https://huggingface.co/docs/datasets/loading_datasets.html#cache-directory",
"I had encountered the same error when running a command `ds = load_dataset('food101')` in a docker container. The error I got: `OSError: Not enough disk space. Needed: 9.43 GiB (download: 4.65 GiB, generated: 4.77 GiB, post-processed: Unknown size)`\r\n\r\nIn case anyone encountered the same issue, this was my fix:\r\n\r\n```sh\r\n# starting the container (mount project directory onto /app, so that the code and data in my project directory are available in the container)\r\ndocker run -it --rm -v $(pwd):/app my-demo:latest bash\r\n```\r\n\r\n\r\n```python\r\n# other code ...\r\nds = load_dataset('food101', cache_dir=\"/app/data\") # set cache_dir to the absolute path of a directory (e.g. /app/data) that's mounted from the host (MacOS in my case) into the docker container\r\n\r\n# this assumes ./data directory exists in your project folder. If not, create it or point it to any other existing directory where you want to store the cache\r\n```\r\n\r\nThanks @albertvillanova for posting the fix above :-) "
] | 1,632,728,482,000 | 1,661,815,296,000 | 1,632,811,395,000 | CONTRIBUTOR | null | null | null | ## Describe the bug
I'm trying to download `natural_questions` dataset from the Internet, and I've specified the cache_dir which locates in a mounted disk and has enough disk space. However, even though the space is enough, the disk space checking function still reports the space of root `/` disk having no enough space.
The file system structure is like below. The root `/` has `115G` disk space available, and the `sda1` is mounted to `/mnt`, which has `1.2T` disk space available:
```
/
/mnt/sda1/path/to/args.dataset_cache_dir
```
## Steps to reproduce the bug
```python
dataset_config = DownloadConfig(
cache_dir=os.path.abspath(args.dataset_cache_dir),
resume_download=True,
)
dataset = load_dataset("natural_questions", download_config=dataset_config)
```
## Expected results
Can download the dataset without an error.
## Actual results
The following error raised:
```
OSError: Not enough disk space. Needed: 134.92 GiB (download: 41.97 GiB, generated: 92.95 GiB, post-processed: Unknown size)
```
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.9.0
- Platform: Ubuntu 18.04
- Python version: 3.8.10
- PyArrow version:
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"Thanks for reporting, @ontocord. We are fixing the wrong metadata."
] | 1,632,718,747,000 | 1,632,747,599,000 | 1,632,747,599,000 | CONTRIBUTOR | null | null | null | ## Describe the bug
Masakhaner dataset is not loading
## Steps to reproduce the bug
```
from datasets import load_dataset
dataset = load_dataset("masakhaner",'amh')
```
## Expected results
Expected the return of a dataset
## Actual results
```
NonMatchingSplitsSizesError Traceback (most recent call last)
<ipython-input-3-a6abc1161d4c> in <module>()
1 from datasets import load_dataset
2
----> 3 dataset = load_dataset("masakhaner",'amh')
3 frames
/usr/local/lib/python3.7/dist-packages/datasets/utils/info_utils.py
in verify_splits(expected_splits, recorded_splits)
72 ]
73 if len(bad_splits) > 0:
---> 74 raise NonMatchingSplitsSizesError(str(bad_splits))
75 logger.info("All the splits matched successfully.")
76
NonMatchingSplitsSizesError: [{'expected': SplitInfo(name='train', num_bytes=639927, num_examples=1751, dataset_name='masakhaner'), 'recorded': SplitInfo(name='train', num_bytes=639911, num_examples=1750, dataset_name='masakhaner')}, {'expected': SplitInfo(name='validation', num_bytes=92768, num_examples=251, dataset_name='masakhaner'), 'recorded': SplitInfo(name='validation', num_bytes=92753, num_examples=250, dataset_name='masakhaner')}, {'expected': SplitInfo(name='test', num_bytes=184286, num_examples=501, dataset_name='masakhaner'), 'recorded': SplitInfo(name='test', num_bytes=184271, num_examples=500, dataset_name='masakhaner')}]
```
## Environment info
Google Colab
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