Module Expr Str Import alias FunctionDef arguments args NameParam NameParam defaults body Return BinOpAdd BinOpAdd BinOpPow BinOpSub SubscriptLoad NameLoad Index Num SubscriptLoad NameLoad Index Num Num BinOpPow BinOpSub SubscriptLoad NameLoad Index Num SubscriptLoad NameLoad Index Num Num BinOpPow BinOpSub SubscriptLoad NameLoad Index Num SubscriptLoad NameLoad Index Num Num decorator_list FunctionDef arguments args NameParam NameParam defaults body Return Call AttributeLoad NameLoad attr BinOpDiv Call AttributeLoad BinOpPow Call NameLoad BinOpSub NameLoad NameLoad Num attr Call NameLoad NameLoad decorator_list FunctionDef arguments args NameParam defaults body Expr Str If CompareGtE NameLoad Num body Return NameLoad orelse Return BinOpAdd BinOpMult Num AttributeLoad NameLoad attr NameLoad decorator_list FunctionDef arguments args NameParam NameParam defaults body Return Call NameLoad BinOpSub NameLoad NameLoad BinOpSub Call NameLoad NameLoad Call NameLoad NameLoad decorator_list FunctionDef arguments args NameParam NameParam defaults body Expr Str Return Call NameLoad Call NameLoad BinOpSub NameLoad NameLoad Call NameLoad BinOpSub Call NameLoad NameLoad Call NameLoad NameLoad decorator_list FunctionDef arguments args NameParam NameParam NameParam NameParam defaults body Assign TupleStore NameStore NameStore NameStore NameLoad Assign TupleStore NameStore NameStore NameStore NameLoad Assign TupleStore NameStore NameStore NameStore NameLoad Assign TupleStore NameStore NameStore NameStore NameLoad Assign NameStore BinOpSub NameLoad NameLoad Assign NameStore BinOpSub NameLoad NameLoad Assign NameStore BinOpSub NameLoad NameLoad Assign NameStore BinOpSub NameLoad NameLoad Assign NameStore BinOpSub BinOpMult NameLoad NameLoad BinOpMult NameLoad NameLoad Assign NameStore BinOpSub NameLoad NameLoad Assign NameStore BinOpSub NameLoad NameLoad Assign NameStore BinOpSub BinOpMult NameLoad NameLoad BinOpMult NameLoad NameLoad Assign NameStore BinOpSub NameLoad NameLoad Assign NameStore BinOpSub NameLoad NameLoad Assign NameStore BinOpSub BinOpMult NameLoad NameLoad BinOpMult NameLoad NameLoad Assign NameStore BinOpSub BinOpMult NameLoad NameLoad BinOpMult NameLoad NameLoad Assign NameStore BinOpDiv Num Call AttributeLoad NameLoad attr BinOpAdd BinOpAdd BinOpMult NameLoad NameLoad BinOpMult NameLoad NameLoad BinOpMult NameLoad NameLoad Assign NameStore BinOpDiv Num Call AttributeLoad NameLoad attr BinOpAdd BinOpAdd BinOpMult NameLoad NameLoad BinOpMult NameLoad NameLoad BinOpMult NameLoad NameLoad Assign NameStore BinOpSub NameLoad NameLoad Assign NameStore BinOpSub BinOpMult NameLoad NameLoad BinOpMult NameLoad NameLoad Assign NameStore BinOpSub BinOpMult NameLoad NameLoad BinOpMult NameLoad NameLoad Assign NameStore BinOpDiv Num Call AttributeLoad NameLoad attr BinOpAdd BinOpAdd Call NameLoad NameLoad Num Call NameLoad NameLoad Num Call NameLoad NameLoad Num Return Call AttributeLoad NameLoad attr BinOpAdd BinOpAdd BinOpMult BinOpMult BinOpSub BinOpMult BinOpMult BinOpMult NameLoad NameLoad NameLoad NameLoad BinOpMult BinOpMult BinOpMult NameLoad NameLoad NameLoad NameLoad NameLoad NameLoad BinOpMult BinOpMult BinOpSub BinOpMult BinOpMult BinOpMult NameLoad NameLoad NameLoad NameLoad BinOpMult BinOpMult BinOpMult NameLoad NameLoad NameLoad NameLoad NameLoad NameLoad BinOpMult BinOpMult NameLoad BinOpSub BinOpMult BinOpMult BinOpMult NameLoad NameLoad NameLoad NameLoad BinOpMult BinOpMult BinOpMult NameLoad NameLoad NameLoad NameLoad NameLoad BinOpAdd BinOpAdd BinOpMult BinOpMult BinOpMult NameLoad NameLoad NameLoad NameLoad BinOpMult BinOpMult BinOpMult NameLoad NameLoad NameLoad NameLoad BinOpMult BinOpMult BinOpMult NameLoad NameLoad NameLoad NameLoad decorator_list
N/A N/A 
Created on 1/12/2014

@author: victor
 N/A math sq_distance N/A N/A a b N/A N/A N/A N/A N/A N/A N/A N/A a N/A 0 N/A b N/A 0 2 N/A N/A N/A a N/A 1 N/A b N/A 1 2 N/A N/A N/A a N/A 2 N/A b N/A 2 2 N/A angular_rmsd N/A N/A a b N/A N/A N/A N/A N/A math sqrt N/A N/A N/A N/A N/A angular_increment N/A a b 2 sum N/A len a N/A to_0_2PI_range N/A N/A angle N/A N/A N/A 
    Converts an angle from the  [-pi, pi] range to the [0, 2pi] range.
    :param angle: The angle to be converted.
    
    :return: The converted angle in [-pi, pi] range.
     N/A N/A angle 0 N/A N/A angle N/A N/A N/A N/A 2 N/A math pi angle N/A angular_increment N/A N/A angle1 angle2 N/A N/A N/A N/A min N/A angle1 angle2 N/A N/A to_0_2PI_range angle1 N/A to_0_2PI_range angle2 N/A angular_distance N/A N/A angle1 angle2 N/A N/A N/A 
    angle1, angle2 , angles in -pi, pi range. 
    
    Returns the angular increment defined by these angles.
     N/A N/A min N/A abs N/A angle1 angle2 N/A abs N/A N/A to_0_2PI_range angle1 N/A to_0_2PI_range angle2 N/A calc_dihedral N/A N/A a1_coords a2_coords a3_coords a4_coords N/A N/A N/A N/A xa ya za a1_coords N/A N/A xb yb zb a2_coords N/A N/A xc yc zc a3_coords N/A N/A xd yd zd a4_coords N/A v1 N/A xc xd N/A v2 N/A yb yc N/A v3 N/A xb xc N/A v4 N/A yc yd N/A v5 N/A N/A v3 v4 N/A v1 v2 N/A v6 N/A ya yb N/A v7 N/A xa xb N/A v8 N/A N/A v7 v2 N/A v3 v6 N/A v9 N/A za zb N/A v10 N/A zb zc N/A v11 N/A N/A v3 v9 N/A v7 v10 N/A v12 N/A N/A v6 v10 N/A v2 v9 N/A v13 N/A 1 N/A N/A math sqrt N/A N/A N/A v8 v8 N/A v12 v12 N/A v11 v11 N/A v14 N/A 1 N/A N/A math sqrt N/A N/A N/A v3 v3 N/A v2 v2 N/A v10 v10 N/A v15 N/A zc zd N/A v16 N/A N/A v1 v10 N/A v3 v15 N/A v17 N/A N/A v2 v15 N/A v4 v10 N/A v18 N/A 1 N/A N/A math sqrt N/A N/A N/A pow v5 2 N/A pow v17 2 N/A pow v16 2 N/A N/A N/A math atan2 N/A N/A N/A N/A N/A N/A N/A N/A v13 v14 v11 v10 N/A N/A N/A v8 v2 v13 v14 v18 v17 N/A N/A N/A N/A N/A N/A v3 v8 v13 v14 N/A N/A N/A v13 v14 v12 v10 v18 v16 N/A N/A v5 N/A N/A N/A N/A v2 v13 v14 v12 N/A N/A N/A v3 v13 v14 v11 v18 N/A N/A N/A N/A N/A v13 v12 v18 v17 N/A N/A N/A v13 v11 v18 v16 N/A N/A N/A v8 v5 v13 v18 N/A