Module ImportFrom alias ImportFrom alias ImportFrom alias ImportFrom alias ImportFrom alias ImportFrom alias ImportFrom alias ImportFrom alias ImportFrom alias ImportFrom alias ImportFrom alias ImportFrom alias ImportFrom alias Import alias Import alias If CompareEq NameLoad Str body If CompareNotEq Call NameLoad AttributeLoad NameLoad attr Num body Print Str SubscriptLoad Call AttributeLoad Call NameLoad SubscriptLoad AttributeLoad NameLoad attr Index Num attr AttributeLoad NameLoad attr Index Num Str Print Str Print BinOpAdd BinOpAdd Str SubscriptLoad Call AttributeLoad Call NameLoad SubscriptLoad AttributeLoad NameLoad attr Index Num attr AttributeLoad NameLoad attr Index Num Str Expr Call NameLoad Assign NameStore Call NameLoad SubscriptLoad AttributeLoad NameLoad attr Index Num Assign NameStore Call NameLoad Call NameLoad SubscriptLoad AttributeLoad NameLoad attr Index Num Assign NameStore Call NameLoad Call NameLoad SubscriptLoad AttributeLoad NameLoad attr Index Num Assign NameStore Call NameLoad Call NameLoad SubscriptLoad AttributeLoad NameLoad attr Index Num Assign NameStore BinOpAdd BinOpAdd BinOpAdd NameLoad AttributeLoad NameLoad attr SubscriptLoad Call AttributeLoad SubscriptLoad Call AttributeLoad Call NameLoad Call AttributeLoad AttributeLoad NameLoad attr attr SubscriptLoad AttributeLoad NameLoad attr Index Num attr AttributeLoad NameLoad attr Index Num attr Str Index Num AttributeLoad NameLoad attr Print Str NameLoad Str NameLoad For NameStore Call NameLoad NameLoad body Assign NameStore Call NameLoad Assign NameStore ListLoad Assign NameStore Call NameLoad keyword Num Expr Call AttributeLoad NameLoad attr Call NameLoad NameLoad NameLoad Assign NameStore Call NameLoad ListLoad Num Num Assign NameStore BinOpMult Num Call NameLoad Num Expr Call AttributeLoad NameLoad attr Call NameLoad NameLoad keyword NameLoad keyword NameLoad Assign NameStore Num Expr Call AttributeLoad NameLoad attr Call NameLoad NameLoad keyword NameLoad keyword NameLoad keyword NameLoad Expr Call AttributeLoad NameLoad attr Call NameLoad NameLoad Assign NameStore Call NameLoad ListLoad Num Num Assign NameStore Call NameLoad keyword NameLoad keyword NameLoad keyword NameLoad Assign NameStore ListComp Call NameLoad NameLoad NameLoad comprehension NameStore NameLoad For NameStore NameLoad body Expr Call AttributeLoad NameLoad attr Call NameLoad Assign NameStore ListComp Call NameLoad NameLoad NameLoad comprehension NameStore NameLoad For NameStore NameLoad body Expr Call AttributeLoad NameLoad attr NameLoad
N/A kameleon_mcmc.distribution.Ring Ring kameleon_mcmc.experiments.ClusterTools ClusterTools kameleon_mcmc.experiments.SingleChainExperiment SingleChainExperiment kameleon_mcmc.kernel.GaussianKernel GaussianKernel kameleon_mcmc.mcmc.MCMCChain MCMCChain kameleon_mcmc.mcmc.MCMCParams MCMCParams kameleon_mcmc.mcmc.output.StatisticsOutput StatisticsOutput kameleon_mcmc.mcmc.samplers.AdaptiveMetropolisLearnScale AdaptiveMetropolisLearnScale kameleon_mcmc.mcmc.samplers.AdaptiveMetropolisPCA AdaptiveMetropolisPCA kameleon_mcmc.mcmc.samplers.KameleonWindowLearnScale KameleonWindowLearnScale kameleon_mcmc.mcmc.samplers.StandardMetropolis StandardMetropolis numpy.lib.twodim_base eye numpy.ma.core array N/A os N/A sys N/A N/A __name__ __main__ N/A N/A N/A N/A len N/A sys argv 5 N/A N/A usage: N/A N/A N/A N/A str N/A N/A sys argv N/A 0 split N/A os sep N/A -1 <experiment_dir_base> <number_of_experiments> <number_of_iterations> <burnin> N/A example: N/A N/A N/A python  N/A N/A N/A N/A str N/A N/A sys argv N/A 0 split N/A os sep N/A -1  /nfs/home1/ucabhst/kameleon_experiments 3 5000 2000 N/A N/A exit N/A experiment_dir_base N/A str N/A N/A sys argv N/A 1 N/A n N/A int N/A str N/A N/A sys argv N/A 2 N/A num_iterations N/A int N/A str N/A N/A sys argv N/A 3 N/A burnin N/A int N/A str N/A N/A sys argv N/A 4 N/A experiment_dir N/A N/A N/A experiment_dir_base N/A os sep N/A N/A N/A N/A N/A N/A N/A str N/A N/A N/A os path abspath N/A N/A sys argv N/A 0 split N/A os sep N/A -1 split . N/A 0 N/A os sep N/A running experiments n times at base experiment_dir N/A i N/A range n N/A N/A distribution N/A Ring N/A mcmc_samplers N/A N/A kernel N/A GaussianKernel sigma 1 N/A N/A N/A mcmc_samplers append N/A KameleonWindowLearnScale distribution kernel N/A mean_est N/A array N/A -2.0 -2.0 N/A cov_est N/A 0.05 N/A eye 2 N/A N/A N/A mcmc_samplers append N/A AdaptiveMetropolisLearnScale distribution mean_est mean_est cov_est cov_est N/A num_eigen 2 N/A N/A N/A mcmc_samplers append N/A AdaptiveMetropolisPCA distribution num_eigen num_eigen mean_est mean_est cov_est cov_est N/A N/A N/A mcmc_samplers append N/A StandardMetropolis distribution N/A start N/A array N/A -2.0 -2.0 N/A mcmc_params N/A MCMCParams start start num_iterations num_iterations burnin burnin N/A mcmc_chains N/A N/A MCMCChain mcmc_sampler mcmc_params N/A mcmc_sampler mcmc_samplers N/A mcmc_chain mcmc_chains N/A N/A N/A N/A mcmc_chain append_mcmc_output N/A StatisticsOutput N/A experiments N/A N/A SingleChainExperiment mcmc_chain experiment_dir N/A mcmc_chain mcmc_chains N/A experiment experiments N/A N/A N/A N/A ClusterTools submit_experiment experiment