Module ImportFrom alias ImportFrom alias Import alias alias alias alias alias alias Expr Call AttributeLoad AttributeLoad NameLoad attr attr Str ImportFrom alias FunctionDef arguments args NameParam NameParam defaults body Pass decorator_list FunctionDef arguments args NameParam NameParam defaults body Raise Call NameLoad Str decorator_list Assign NameStore BinOpMod Str TupleLoad Call AttributeLoad NameLoad attr Call AttributeLoad NameLoad attr Num Num Expr Call AttributeLoad NameLoad attr NameLoad Assign NameStore BinOpAdd NameLoad Str Assign NameStore Call NameLoad NameLoad Assign NameStore Call NameLoad NameLoad Str Expr Call AttributeLoad NameLoad attr Call AttributeLoad NameLoad attr keyword Num Expr Call AttributeLoad NameLoad attr Assign NameStore Call NameLoad Expr Call AttributeLoad NameLoad attr keyword NameLoad Expr Call AttributeLoad NameLoad attr NameLoad Expr Call AttributeLoad NameLoad attr NameLoad Expr Call AttributeLoad NameLoad attr AttributeLoad NameLoad attr Expr Call AttributeLoad NameLoad attr Str Assign NameStore Call AttributeLoad NameLoad attr Expr Call AttributeLoad NameLoad attr Assign NameStore Call AttributeLoad NameLoad attr keyword AttributeLoad NameLoad attr keyword Str keyword Str keyword Num keyword TupleLoad Call AttributeLoad NameLoad attr Call AttributeLoad NameLoad attr keyword Str Assign NameStore ListComp Call AttributeLoad NameLoad attr NameLoad comprehension NameStore TupleLoad Str Str Str Str Assign NameStore SubscriptLoad NameLoad ExtSlice Slice Index NameLoad Assign NameStore Call AttributeLoad NameLoad attr SubscriptLoad NameLoad ExtSlice Slice Index Num Num Assign NameStore SubscriptLoad NameLoad ExtSlice Slice Num NameLoad Slice Assign NameStore SubscriptLoad NameLoad ExtSlice Slice Index Num Assign NameStore SubscriptLoad NameLoad ExtSlice Slice Slice Num Expr Call AttributeLoad NameLoad attr NameLoad BinOpDiv NameLoad Call AttributeLoad NameLoad attr Num Expr Call AttributeLoad Call AttributeLoad NameLoad attr TupleLoad Str Str Str keyword Str keyword TupleLoad Num Num attr NameLoad Expr Call AttributeLoad NameLoad attr Expr Call AttributeLoad NameLoad attr NameLoad
N/A PyJacobian PyJacobian pysb.jacobian JacobianGenerator N/A sys os shutil random numpy pylab N/A N/A N/A N/A sys path append models earm_1_0 model output_handler N/A N/A icode message N/A N/A N/A N/A input_handler N/A N/A icode message N/A N/A N/A N/A Exception Jacobian backend asked for console input unexpectedly N/A N/A workdir N/A tmp_pysb_jac_%d_%d/ N/A N/A N/A os getpid N/A N/A random randint 0 10000 N/A N/A N/A os mkdir workdir N/A jac_filename N/A workdir model.jac N/A gen N/A JacobianGenerator model N/A jac_file N/A file jac_filename w N/A N/A N/A jac_file write N/A N/A gen get_content sim_length 72000 N/A N/A N/A jac_file close N/A pj N/A PyJacobian N/A N/A N/A pj setJacobianDirectory all workdir N/A N/A N/A pj addOutputCallback output_handler N/A N/A N/A pj addInputCallback input_handler N/A N/A N/A pj loadFile N/A jac_file name N/A N/A N/A pj execute SIM N/A ts N/A N/A pj createTimeSeriesData N/A N/A N/A pj terminate N/A full N/A N/A numpy memmap filename N/A ts binfile dtype float32 mode r offset 4 shape N/A N/A N/A ts getNumData N/A N/A ts getNumVariables order C N/A indices N/A N/A N/A ts _getIndex name N/A name N/A time sim.m.tBid sim.m.CPARP sim.m.cSmac N/A a N/A full N/A N/A N/A indices N/A last_i N/A N/A numpy searchsorted N/A a N/A N/A N/A 0 25000 N/A b N/A a N/A N/A 0 last_i N/A N/A t N/A b N/A N/A N/A 0 N/A y N/A b N/A N/A N/A 1 N/A N/A N/A pylab plot t N/A y N/A N/A y max 0 N/A N/A N/A N/A N/A pylab legend N/A tBid CPARP cSmac loc upper left bbox_to_anchor N/A 0 1 draw_frame False N/A N/A N/A pylab show N/A N/A N/A shutil rmtree workdir