Module Expr Str Import alias Import alias ImportFrom alias ImportFrom alias If CompareEq NameLoad Str body Assign NameStore Num Assign NameStore BinOpDiv BinOpMult NameLoad BinOpSub NameLoad Num Num Assign NameStore Call AttributeLoad NameLoad attr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad Assign NameStore Call NameLoad NameLoad Assign NameStore Call AttributeLoad NameLoad attr NameLoad Num Assign NameStore Call AttributeLoad NameLoad attr NameLoad Assign NameStore Call AttributeLoad NameLoad attr Assign NameStore SubscriptLoad Call AttributeLoad NameLoad attr NameLoad NameLoad Str Index Num Assign NameStore Call AttributeLoad NameLoad attr Print BinOpMod Str BinOpSub NameLoad NameLoad Assign NameStore Call AttributeLoad NameLoad attr NameLoad Assign NameStore Call AttributeLoad NameLoad attr Assign NameStore SubscriptLoad Call AttributeLoad NameLoad attr NameLoad NameLoad Str Index Num Assign NameStore Call AttributeLoad NameLoad attr Print BinOpMod Str BinOpSub NameLoad NameLoad Assign NameStore Call AttributeLoad NameLoad attr NameLoad Assign NameStore Call AttributeLoad NameLoad attr Assign NameStore SubscriptLoad Call AttributeLoad NameLoad attr NameLoad NameLoad Str Index Num Assign NameStore Call AttributeLoad NameLoad attr Print BinOpMod Str BinOpSub NameLoad NameLoad Expr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad NameLoad Num Expr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad NameLoad Num Expr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad NameLoad Num
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Created on 14/01/2013

@author: victor
 N/A numpy N/A time pyRMSD.condensedMatrix CondensedMatrix pyproct.algorithms.spectral.spectralClusteringAlgorithm SpectralClusteringAlgorithm N/A N/A __name__ __main__ N/A N/A MAX_ELEMENTS 2000 N/A DATA_LEN N/A N/A MAX_ELEMENTS N/A MAX_ELEMENTS 1 2 N/A numpy_matrix_data N/A N/A numpy abs N/A N/A N/A numpy random rand DATA_LEN N/A matrix N/A CondensedMatrix numpy_matrix_data N/A W N/A N/A SpectralClusteringAlgorithm calculate_adjacency_matrix matrix 1 N/A W_tmp N/A N/A numpy array W N/A t1 N/A N/A time time N/A L_PYTHON N/A N/A N/A SpectralClusteringAlgorithm calculate_laplacian W_tmp matrix PYTHON N/A 0 N/A t2 N/A N/A time time N/A N/A Calculations took %0.3f s N/A t2 t1 N/A W_tmp N/A N/A numpy array W N/A t1 N/A N/A time time N/A L_NUMPY N/A N/A N/A SpectralClusteringAlgorithm calculate_laplacian W_tmp matrix NUMPY N/A 0 N/A t2 N/A N/A time time N/A N/A Calculations took %0.3f s N/A t2 t1 N/A W_tmp N/A N/A numpy array W N/A t1 N/A N/A time time N/A L_NUMPY_PURE N/A N/A N/A SpectralClusteringAlgorithm calculate_laplacian W_tmp matrix NUMPY_PURE N/A 0 N/A t2 N/A N/A time time N/A N/A Calculations took %0.3f s N/A t2 t1 N/A N/A N/A N/A numpy testing assert_almost_equal L_NUMPY L_NUMPY_PURE 10 N/A N/A N/A N/A numpy testing assert_almost_equal L_PYTHON L_NUMPY 3 N/A N/A N/A N/A numpy testing assert_almost_equal L_PYTHON L_NUMPY_PURE 3