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chrisspen/dtree
dtree.py
https://github.com/chrisspen/dtree/blob/9e9c9992b22ad9a7e296af7e6837666b05db43ef/dtree.py#L530-L541
def choose_attribute(data, attributes, class_attr, fitness, method): """ Cycles through all the attributes and returns the attribute with the highest information gain (or lowest entropy). """ best = (-1e999999, None) for attr in attributes: if attr == class_attr: continue ...
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Cycles through all the attributes and returns the attribute with the highest information gain (or lowest entropy).
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python
train
Nic30/hwt
hwt/hdl/types/bitValFunctions.py
https://github.com/Nic30/hwt/blob/8cbb399e326da3b22c233b98188a9d08dec057e6/hwt/hdl/types/bitValFunctions.py#L91-L144
def bitsCmp(self, other, op, evalFn=None): """ :attention: If other is Bool signal convert this to bool (not ideal, due VHDL event operator) """ other = toHVal(other) t = self._dtype ot = other._dtype iamVal = isinstance(self, Value) otherIsVal = isinstance(other, Value) if...
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:attention: If other is Bool signal convert this to bool (not ideal, due VHDL event operator)
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python
test
tmoerman/arboreto
arboreto/core.py
https://github.com/tmoerman/arboreto/blob/3ff7b6f987b32e5774771751dea646fa6feaaa52/arboreto/core.py#L85-L102
def to_tf_matrix(expression_matrix, gene_names, tf_names): """ :param expression_matrix: numpy matrix. Rows are observations and columns are genes. :param gene_names: a list of gene names. Each entry corresponds to the expression_matrix column with same index. :param tf...
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:param expression_matrix: numpy matrix. Rows are observations and columns are genes. :param gene_names: a list of gene names. Each entry corresponds to the expression_matrix column with same index. :param tf_names: a list of transcription factor names. Should be a subset of gene_names. :return: tuple of: ...
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python
train
ceph/ceph-deploy
ceph_deploy/mon.py
https://github.com/ceph/ceph-deploy/blob/86943fcc454cd4c99a86e3493e9e93a59c661fef/ceph_deploy/mon.py#L290-L304
def hostname_is_compatible(conn, logger, provided_hostname): """ Make sure that the host that we are connecting to has the same value as the `hostname` in the remote host, otherwise mons can fail not reaching quorum. """ logger.debug('determining if provided host has same hostname in remote') re...
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Make sure that the host that we are connecting to has the same value as the `hostname` in the remote host, otherwise mons can fail not reaching quorum.
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python
train
calmjs/calmjs
src/calmjs/dist.py
https://github.com/calmjs/calmjs/blob/b9b407c2b6a7662da64bccba93bb8d92e7a5fafd/src/calmjs/dist.py#L398-L484
def build_helpers_module_registry_dependencies(registry_name='calmjs.module'): """ Return a tuple of funtions that will provide the functions that return the relevant sets of module registry records based on the dependencies defined for the provided packages. """ def get_module_registry_depende...
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Return a tuple of funtions that will provide the functions that return the relevant sets of module registry records based on the dependencies defined for the provided packages.
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python
train
stephanepechard/projy
projy/cmdline.py
https://github.com/stephanepechard/projy/blob/3146b0e3c207b977e1b51fcb33138746dae83c23/projy/cmdline.py#L11-L29
def docopt_arguments(): """ Creates beautiful command-line interfaces. See https://github.com/docopt/docopt """ doc = """Projy: Create templated project. Usage: projy <template> <project> [<substitution>...] projy -i | --info <template> projy -l | --list projy -h | ...
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Creates beautiful command-line interfaces. See https://github.com/docopt/docopt
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python
train
DataONEorg/d1_python
lib_common/src/d1_common/ext/mimeparser.py
https://github.com/DataONEorg/d1_python/blob/3ac4d4f3ca052d3e8641a6a329cab526c8ddcb0d/lib_common/src/d1_common/ext/mimeparser.py#L50-L66
def parse_mime_type(mime_type): """Carves up a mime-type and returns a tuple of the (type, subtype, params) where 'params' is a dictionary of all the parameters for the media range. For example, the media range 'application/xhtml;q=0.5' would get parsed into: ('application', 'xhtml', {'q', '0.5'}) ...
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Carves up a mime-type and returns a tuple of the (type, subtype, params) where 'params' is a dictionary of all the parameters for the media range. For example, the media range 'application/xhtml;q=0.5' would get parsed into: ('application', 'xhtml', {'q', '0.5'})
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python
train
Fantomas42/django-blog-zinnia
zinnia/xmlrpc/metaweblog.py
https://github.com/Fantomas42/django-blog-zinnia/blob/b4949304b104a8e1a7a7a0773cbfd024313c3a15/zinnia/xmlrpc/metaweblog.py#L127-L155
def post_structure(entry, site): """ A post structure with extensions. """ author = entry.authors.all()[0] return {'title': entry.title, 'description': six.text_type(entry.html_content), 'link': '%s://%s%s' % (PROTOCOL, site.domain, entry.ge...
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A post structure with extensions.
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python
train
alphatwirl/alphatwirl
alphatwirl/concurrently/WorkingArea.py
https://github.com/alphatwirl/alphatwirl/blob/5138eeba6cd8a334ba52d6c2c022b33c61e3ba38/alphatwirl/concurrently/WorkingArea.py#L62-L73
def open(self): """Open the working area Returns ------- None """ self.path = self._prepare_dir(self.topdir) self._copy_executable(area_path=self.path) self._save_logging_levels(area_path=self.path) self._put_python_modules(modules=self.python_mo...
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Open the working area Returns ------- None
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python
valid
DMSC-Instrument-Data/lewis
src/lewis/adapters/stream.py
https://github.com/DMSC-Instrument-Data/lewis/blob/931d96b8c761550a6a58f6e61e202690db04233a/src/lewis/adapters/stream.py#L734-L760
def _bind_device(self): """ This method implements ``_bind_device`` from :class:`~lewis.core.devices.InterfaceBase`. It binds Cmd and Var definitions to implementations in Interface and Device. """ patterns = set() self.bound_commands = [] for cmd in self.comman...
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This method implements ``_bind_device`` from :class:`~lewis.core.devices.InterfaceBase`. It binds Cmd and Var definitions to implementations in Interface and Device.
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python
train
metavee/batchproc
batchproc/util.py
https://github.com/metavee/batchproc/blob/aa084a2ac8ab7950f7a7d3adb54b0cf010c6a935/batchproc/util.py#L11-L26
def expand_folder(files): """Return a clone of file list files where all directories are recursively replaced with their contents.""" expfiles = [] for file in files: if os.path.isdir(file): for dirpath, dirnames, filenames in os.walk(file): for filename in filenames: ...
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Return a clone of file list files where all directories are recursively replaced with their contents.
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python
train
inveniosoftware/invenio-previewer
invenio_previewer/extensions/zip.py
https://github.com/inveniosoftware/invenio-previewer/blob/558fd22e0f29cc8cd7a6999abd4febcf6b248c49/invenio_previewer/extensions/zip.py#L26-L67
def make_tree(file): """Create tree structure from ZIP archive.""" max_files_count = current_app.config.get('PREVIEWER_ZIP_MAX_FILES', 1000) tree = {'type': 'folder', 'id': -1, 'children': {}} try: with file.open() as fp: zf = zipfile.ZipFile(fp) # Detect filenames encod...
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Create tree structure from ZIP archive.
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python
train
ninuxorg/nodeshot
nodeshot/community/mailing/models/outward.py
https://github.com/ninuxorg/nodeshot/blob/2466f0a55f522b2696026f196436ce7ba3f1e5c6/nodeshot/community/mailing/models/outward.py#L67-L166
def get_recipients(self): """ Determine recipients depending on selected filtering which can be either: * group based * layer based * user based Choosing "group" and "layer" filtering together has the effect of sending the message only to users for wh...
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Determine recipients depending on selected filtering which can be either: * group based * layer based * user based Choosing "group" and "layer" filtering together has the effect of sending the message only to users for which the following conditions are both true: ...
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python
train
gwastro/pycbc-glue
pycbc_glue/ligolw/array.py
https://github.com/gwastro/pycbc-glue/blob/a3e906bae59fbfd707c3ff82e5d008d939ec5e24/pycbc_glue/ligolw/array.py#L117-L151
def from_array(name, array, dim_names = None): """ Construct a LIGO Light Weight XML Array document subtree from a numpy array object. Example: >>> import numpy, sys >>> a = numpy.arange(12, dtype = "double") >>> a.shape = (4, 3) >>> from_array(u"test", a).write(sys.stdout) # doctest: +NORMALIZE_WHITESPACE <...
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Construct a LIGO Light Weight XML Array document subtree from a numpy array object. Example: >>> import numpy, sys >>> a = numpy.arange(12, dtype = "double") >>> a.shape = (4, 3) >>> from_array(u"test", a).write(sys.stdout) # doctest: +NORMALIZE_WHITESPACE <Array Type="real_8" Name="test:array"> <Dim>3</Dim>...
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python
train
pecan/pecan
pecan/decorators.py
https://github.com/pecan/pecan/blob/833d0653fa0e6bbfb52545b091c30182105f4a82/pecan/decorators.py#L25-L95
def expose(template=None, generic=False, route=None, **kw): ''' Decorator used to flag controller methods as being "exposed" for access via HTTP, and to configure that access. :param template: The path to a template, relative to the base template d...
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Decorator used to flag controller methods as being "exposed" for access via HTTP, and to configure that access. :param template: The path to a template, relative to the base template directory. Can also be passed a string representing a special or custom renderer, suc...
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python
train
adaptive-learning/proso-apps
proso_user/views.py
https://github.com/adaptive-learning/proso-apps/blob/8278c72e498d6ef8d392cc47b48473f4ec037142/proso_user/views.py#L341-L370
def initmobile_view(request): """ Create lazy user with a password. Used from the Android app. Also returns csrf token. GET parameters: username: user's name password: user's password """ if 'username' in request.GET and 'password' in request.GET: ...
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Create lazy user with a password. Used from the Android app. Also returns csrf token. GET parameters: username: user's name password: user's password
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python
train
softlayer/softlayer-python
SoftLayer/auth.py
https://github.com/softlayer/softlayer-python/blob/9f181be08cc3668353b05a6de0cb324f52cff6fa/SoftLayer/auth.py#L50-L57
def get_request(self, request): """Sets token-based auth headers.""" request.headers['authenticate'] = { 'complexType': 'PortalLoginToken', 'userId': self.user_id, 'authToken': self.auth_token, } return request
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Sets token-based auth headers.
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python
train
loli/medpy
medpy/core/logger.py
https://github.com/loli/medpy/blob/95216b9e22e7ce301f0edf953ee2a2f1b6c6aee5/medpy/core/logger.py#L103-L119
def setHandler(self, hdlr): r"""Replace the current handler with a new one. Parameters ---------- hdlr : logging.Handler A subclass of Handler that should used to handle the logging output. Notes ----- If none should be replaces, but...
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r"""Replace the current handler with a new one. Parameters ---------- hdlr : logging.Handler A subclass of Handler that should used to handle the logging output. Notes ----- If none should be replaces, but just one added, use the parent clas...
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python
train
SergeySatskiy/cdm-pythonparser
legacy/src/cdmbriefparser.py
https://github.com/SergeySatskiy/cdm-pythonparser/blob/7e933aca899b1853d744082313ffc3a8b1154505/legacy/src/cdmbriefparser.py#L540-L546
def _onDecorator( self, name, line, pos, absPosition ): " Memorizes a function or a class decorator " # A class or a function must be on the top of the stack self.objectsStack[ -1 ].decorators.append( Decorator( name, line, pos, ...
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Memorizes a function or a class decorator
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python
train
Qiskit/qiskit-terra
qiskit/converters/ast_to_dag.py
https://github.com/Qiskit/qiskit-terra/blob/d4f58d903bc96341b816f7c35df936d6421267d1/qiskit/converters/ast_to_dag.py#L214-L304
def _process_node(self, node): """Carry out the action associated with a node.""" if node.type == "program": self._process_children(node) elif node.type == "qreg": qreg = QuantumRegister(node.index, node.name) self.dag.add_qreg(qreg) elif node.type =...
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Carry out the action associated with a node.
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python
test
saltstack/salt
salt/modules/win_iis.py
https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/modules/win_iis.py#L197-L264
def list_sites(): ''' List all the currently deployed websites. Returns: dict: A dictionary of the IIS sites and their properties. CLI Example: .. code-block:: bash salt '*' win_iis.list_sites ''' ret = dict() ps_cmd = ['Get-ChildItem', '-Path', r"'IIS:\...
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List all the currently deployed websites. Returns: dict: A dictionary of the IIS sites and their properties. CLI Example: .. code-block:: bash salt '*' win_iis.list_sites
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python
train
Bearle/django-private-chat
django_private_chat/handlers.py
https://github.com/Bearle/django-private-chat/blob/5b51e65875795c5c0ce21bb631c53bd3aac4c26b/django_private_chat/handlers.py#L14-L24
def target_message(conn, payload): """ Distibuted payload (message) to one connection :param conn: connection :param payload: payload(json dumpable) :return: """ try: yield from conn.send(json.dumps(payload)) except Exception as e: logger.debug('could not send',...
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Distibuted payload (message) to one connection :param conn: connection :param payload: payload(json dumpable) :return:
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python
train
projecthamster/hamster
src/hamster/lib/stuff.py
https://github.com/projecthamster/hamster/blob/ca5254eff53172796ddafc72226c394ed1858245/src/hamster/lib/stuff.py#L85-L121
def format_duration(minutes, human = True): """formats duration in a human readable format. accepts either minutes or timedelta""" if isinstance(minutes, dt.timedelta): minutes = duration_minutes(minutes) if not minutes: if human: return "" else: return ...
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formats duration in a human readable format. accepts either minutes or timedelta
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python
train
chrisspen/burlap
burlap/deploy.py
https://github.com/chrisspen/burlap/blob/a92b0a8e5206850bb777c74af8421ea8b33779bd/burlap/deploy.py#L21-L30
def iter_dict_differences(a, b): """ Returns a generator yielding all the keys that have values that differ between each dictionary. """ common_keys = set(a).union(b) for k in common_keys: a_value = a.get(k) b_value = b.get(k) if a_value != b_value: yield k, (a_va...
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Returns a generator yielding all the keys that have values that differ between each dictionary.
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python
valid
tomplus/kubernetes_asyncio
kubernetes_asyncio/client/api/storage_v1_api.py
https://github.com/tomplus/kubernetes_asyncio/blob/f9ab15317ec921409714c7afef11aeb0f579985d/kubernetes_asyncio/client/api/storage_v1_api.py#L35-L58
def create_storage_class(self, body, **kwargs): # noqa: E501 """create_storage_class # noqa: E501 create a StorageClass # noqa: E501 This method makes a synchronous HTTP request by default. To make an asynchronous HTTP request, please pass async_req=True >>> thread = api.crea...
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create_storage_class # noqa: E501 create a StorageClass # noqa: E501 This method makes a synchronous HTTP request by default. To make an asynchronous HTTP request, please pass async_req=True >>> thread = api.create_storage_class(body, async_req=True) >>> result = thread.get() ...
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python
train
AndrewAnnex/SpiceyPy
spiceypy/spiceypy.py
https://github.com/AndrewAnnex/SpiceyPy/blob/fc20a9b9de68b58eed5b332f0c051fb343a6e335/spiceypy/spiceypy.py#L6809-L6832
def hx2dp(string): """ Convert a string representing a double precision number in a base 16 scientific notation into its equivalent double precision number. http://naif.jpl.nasa.gov/pub/naif/toolkit_docs/C/cspice/hx2dp_c.html :param string: Hex form string to convert to double precision. :...
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Convert a string representing a double precision number in a base 16 scientific notation into its equivalent double precision number. http://naif.jpl.nasa.gov/pub/naif/toolkit_docs/C/cspice/hx2dp_c.html :param string: Hex form string to convert to double precision. :type string: str :return: D...
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python
train
mikusjelly/apkutils
apkutils/apkfile.py
https://github.com/mikusjelly/apkutils/blob/2db1ed0cdb610dfc55bfd77266e9a91e4764bba4/apkutils/apkfile.py#L1394-L1415
def _writecheck(self, zinfo): """Check for errors before writing a file to the archive.""" if zinfo.filename in self.NameToInfo: import warnings warnings.warn('Duplicate name: %r' % zinfo.filename, stacklevel=3) if self.mode not in ('w', 'x', 'a'): raise Runti...
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Check for errors before writing a file to the archive.
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python
train
androguard/androguard
generators/axplorer_to_androguard.py
https://github.com/androguard/androguard/blob/984c0d981be2950cf0451e484f7b0d4d53bc4911/generators/axplorer_to_androguard.py#L18-L53
def name_to_androguard(n): """ Convert a object or primitive name into androguard syntax For example: byte --> B foo.bar.bla --> Lfoo/bar/bla; [int --> [I There is also a special case, where some arrays are specified differently: B[] --> [B foo.bar.bla[] --> [Lf...
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Convert a object or primitive name into androguard syntax For example: byte --> B foo.bar.bla --> Lfoo/bar/bla; [int --> [I There is also a special case, where some arrays are specified differently: B[] --> [B foo.bar.bla[] --> [Lfoo/bar/bla; :param n: :return:
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python
train
OLC-Bioinformatics/sipprverse
MLSTsippr/mlst.py
https://github.com/OLC-Bioinformatics/sipprverse/blob/d4f10cdf8e1a39dac0953db61c21c97efc6006de/MLSTsippr/mlst.py#L519-L556
def report_parse(self): """ If the pipeline has previously been run on these data, instead of reading through the results, parse the report instead """ # Initialise lists report_strains = list() genus_list = list() if self.analysistype == 'mlst': ...
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If the pipeline has previously been run on these data, instead of reading through the results, parse the report instead
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python
train
joytunes/JTLocalize
localization_flow/jtlocalize/prepare_for_translation.py
https://github.com/joytunes/JTLocalize/blob/87864dc60114e0e61c768d057c6eddfadff3f40a/localization_flow/jtlocalize/prepare_for_translation.py#L31-L60
def prepare_for_translation(localization_bundle_path): """ Prepares the localization bundle for translation. This means, after creating the strings files using genstrings.sh, this will produce '.pending' files, that contain the files that are yet to be translated. Args: localization_bundle_pat...
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Prepares the localization bundle for translation. This means, after creating the strings files using genstrings.sh, this will produce '.pending' files, that contain the files that are yet to be translated. Args: localization_bundle_path (str): The path to the localization bundle.
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python
train
RI-imaging/nrefocus
examples/example_helper.py
https://github.com/RI-imaging/nrefocus/blob/ad09aeecace609ab8f9effcb662d2b7d50826080/examples/example_helper.py#L7-L21
def load_cell(fname="HL60_field.zip"): "Load zip file and return complex field" here = op.dirname(op.abspath(__file__)) data = op.join(here, "data") arc = zipfile.ZipFile(op.join(data, fname)) for f in arc.filelist: with arc.open(f) as fd: if f.filename.count("imag"): ...
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Load zip file and return complex field
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python
train
saltstack/salt
salt/modules/network.py
https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/modules/network.py#L286-L360
def _netstat_bsd(): ''' Return netstat information for BSD flavors ''' ret = [] if __grains__['kernel'] == 'NetBSD': for addr_family in ('inet', 'inet6'): cmd = 'netstat -f {0} -an | tail -n+3'.format(addr_family) out = __salt__['cmd.run'](cmd, python_shell=True) ...
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Return netstat information for BSD flavors
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python
train
dhhagan/py-opc
opc/__init__.py
https://github.com/dhhagan/py-opc/blob/2c8f19530fb64bf5fd4ee0d694a47850161ed8a7/opc/__init__.py#L235-L258
def read_info_string(self): """Reads the information string for the OPC :rtype: string :Example: >>> alpha.read_info_string() 'OPC-N2 FirmwareVer=OPC-018.2....................BD' """ infostring = [] # Send the command byte and sleep for 9 ms se...
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Reads the information string for the OPC :rtype: string :Example: >>> alpha.read_info_string() 'OPC-N2 FirmwareVer=OPC-018.2....................BD'
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python
valid
markuskiller/textblob-de
textblob_de/ext/_pattern/text/tree.py
https://github.com/markuskiller/textblob-de/blob/1b427b2cdd7e5e9fd3697677a98358fae4aa6ad1/textblob_de/ext/_pattern/text/tree.py#L222-L230
def next(self, type=None): """ Returns the next word in the sentence with the given type. """ i = self.index + 1 s = self.sentence while i < len(s): if type in (s[i].type, None): return s[i] i += 1
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Returns the next word in the sentence with the given type.
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python
train
lvieirajr/mongorest
mongorest/decorators.py
https://github.com/lvieirajr/mongorest/blob/00f4487ded33254434bc51ff09d48c7a936bd465/mongorest/decorators.py#L47-L67
def serializable(wrapped): """ If a keyword argument 'serialize' with a True value is passed to the Wrapped function, the return of the wrapped function will be serialized. Nothing happens if the argument is not passed or the value is not True """ @wraps(wrapped) def wrapper(*args, **kwargs...
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If a keyword argument 'serialize' with a True value is passed to the Wrapped function, the return of the wrapped function will be serialized. Nothing happens if the argument is not passed or the value is not True
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python
train
PmagPy/PmagPy
programs/deprecated/umich_magic.py
https://github.com/PmagPy/PmagPy/blob/c7984f8809bf40fe112e53dcc311a33293b62d0b/programs/deprecated/umich_magic.py#L7-L244
def main(): """ NAME umich_magic.py DESCRIPTION converts UMICH .mag format files to magic_measurements format files SYNTAX umich_magic.py [command line options] OPTIONS -h: prints the help message and quits. -usr USER: identify user, default is "" ...
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NAME umich_magic.py DESCRIPTION converts UMICH .mag format files to magic_measurements format files SYNTAX umich_magic.py [command line options] OPTIONS -h: prints the help message and quits. -usr USER: identify user, default is "" -f FILE: specify .mag ...
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python
train
rigetti/quantumflow
quantumflow/paulialgebra.py
https://github.com/rigetti/quantumflow/blob/13a66cabbe8aabf6e023cc675f4a4ebe6ccda8fb/quantumflow/paulialgebra.py#L348-L372
def pauli_commuting_sets(element: Pauli) -> Tuple[Pauli, ...]: """Gather the terms of a Pauli polynomial into commuting sets. Uses the algorithm defined in (Raeisi, Wiebe, Sanders, arXiv:1108.4318, 2011) to find commuting sets. Except uses commutation check from arXiv:1405.5749v2 """ if len(ele...
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Gather the terms of a Pauli polynomial into commuting sets. Uses the algorithm defined in (Raeisi, Wiebe, Sanders, arXiv:1108.4318, 2011) to find commuting sets. Except uses commutation check from arXiv:1405.5749v2
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python
train
pgmpy/pgmpy
pgmpy/models/DynamicBayesianNetwork.py
https://github.com/pgmpy/pgmpy/blob/9381a66aba3c3871d3ccd00672b148d17d63239e/pgmpy/models/DynamicBayesianNetwork.py#L120-L133
def _nodes(self): """ Returns the list of nodes present in the network Examples -------- >>> from pgmpy.models import DynamicBayesianNetwork as DBN >>> dbn = DBN() >>> dbn.add_nodes_from(['A', 'B', 'C']) >>> sorted(dbn._nodes()) ['B', 'A', 'C'] ...
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Returns the list of nodes present in the network Examples -------- >>> from pgmpy.models import DynamicBayesianNetwork as DBN >>> dbn = DBN() >>> dbn.add_nodes_from(['A', 'B', 'C']) >>> sorted(dbn._nodes()) ['B', 'A', 'C']
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python
train
pandas-dev/pandas
pandas/core/internals/blocks.py
https://github.com/pandas-dev/pandas/blob/9feb3ad92cc0397a04b665803a49299ee7aa1037/pandas/core/internals/blocks.py#L2597-L2643
def convert(self, *args, **kwargs): """ attempt to coerce any object types to better types return a copy of the block (if copy = True) by definition we ARE an ObjectBlock!!!!! can return multiple blocks! """ if args: raise NotImplementedError by_item = kwarg...
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attempt to coerce any object types to better types return a copy of the block (if copy = True) by definition we ARE an ObjectBlock!!!!! can return multiple blocks!
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python
train
datascopeanalytics/scrubadub
scrubadub/detectors/__init__.py
https://github.com/datascopeanalytics/scrubadub/blob/914bda49a16130b44af43df6a2f84755477c407c/scrubadub/detectors/__init__.py#L12-L22
def iter_detector_clss(): """Iterate over all of the detectors that are included in this sub-package. This is a convenience method for capturing all new Detectors that are added over time and it is used both by the unit tests and in the ``Scrubber.__init__`` method. """ return iter_subclasses( ...
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Iterate over all of the detectors that are included in this sub-package. This is a convenience method for capturing all new Detectors that are added over time and it is used both by the unit tests and in the ``Scrubber.__init__`` method.
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python
train
wmayner/pyphi
pyphi/validate.py
https://github.com/wmayner/pyphi/blob/deeca69a084d782a6fde7bf26f59e93b593c5d77/pyphi/validate.py#L118-L128
def network(n): """Validate a |Network|. Checks the TPM and connectivity matrix. """ tpm(n.tpm) connectivity_matrix(n.cm) if n.cm.shape[0] != n.size: raise ValueError("Connectivity matrix must be NxN, where N is the " "number of nodes in the network.") retur...
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Validate a |Network|. Checks the TPM and connectivity matrix.
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python
train
StackStorm/pybind
pybind/slxos/v17r_1_01a/mpls_state/rsvp/interfaces/__init__.py
https://github.com/StackStorm/pybind/blob/44c467e71b2b425be63867aba6e6fa28b2cfe7fb/pybind/slxos/v17r_1_01a/mpls_state/rsvp/interfaces/__init__.py#L871-L894
def _set_interface_flooding_up_threshold(self, v, load=False): """ Setter method for interface_flooding_up_threshold, mapped from YANG variable /mpls_state/rsvp/interfaces/interface_flooding_up_threshold (feature-config-source) If this variable is read-only (config: false) in the source YANG file, then ...
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Setter method for interface_flooding_up_threshold, mapped from YANG variable /mpls_state/rsvp/interfaces/interface_flooding_up_threshold (feature-config-source) If this variable is read-only (config: false) in the source YANG file, then _set_interface_flooding_up_threshold is considered as a private method....
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python
train
peeringdb/peeringdb-py
peeringdb/config.py
https://github.com/peeringdb/peeringdb-py/blob/cf2060a1d5ef879a01cf849e54b7756909ab2661/peeringdb/config.py#L115-L120
def convert_old(data): "Convert config data with old schema to new schema" ret = default_config() ret['sync'].update(data.get('peeringdb', {})) ret['orm']['database'].update(data.get('database', {})) return ret
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Convert config data with old schema to new schema
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python
train
project-rig/rig
rig/machine_control/machine_controller.py
https://github.com/project-rig/rig/blob/3a3e053d3214899b6d68758685835de0afd5542b/rig/machine_control/machine_controller.py#L2838-L2869
def unpack_routing_table_entry(packed): """Unpack a routing table entry read from a SpiNNaker machine. Parameters ---------- packet : :py:class:`bytes` Bytes containing a packed routing table. Returns ------- (:py:class:`~rig.routing_table.RoutingTableEntry`, app_id, core) or None ...
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Unpack a routing table entry read from a SpiNNaker machine. Parameters ---------- packet : :py:class:`bytes` Bytes containing a packed routing table. Returns ------- (:py:class:`~rig.routing_table.RoutingTableEntry`, app_id, core) or None Tuple containing the routing entry, the...
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python
train
edx/XBlock
xblock/runtime.py
https://github.com/edx/XBlock/blob/368bf46e2c0ee69bbb21817f428c4684936e18ee/xblock/runtime.py#L1264-L1268
def lex(self, text): """Iterator that tokenizes `text` and yields up tokens as they are found""" for match in self.regex.finditer(text): name = match.lastgroup yield (name, match.group(name))
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Iterator that tokenizes `text` and yields up tokens as they are found
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python
train
libtcod/python-tcod
tcod/libtcodpy.py
https://github.com/libtcod/python-tcod/blob/8ba10c5cfb813eaf3e834de971ba2d6acb7838e4/tcod/libtcodpy.py#L818-L833
def color_scale_HSV(c: Color, scoef: float, vcoef: float) -> None: """Scale a color's saturation and value. Does not return a new Color. ``c`` is modified inplace. Args: c (Union[Color, List[int]]): A Color instance, or an [r, g, b] list. scoef (float): Saturation multiplier, from 0 to 1....
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Scale a color's saturation and value. Does not return a new Color. ``c`` is modified inplace. Args: c (Union[Color, List[int]]): A Color instance, or an [r, g, b] list. scoef (float): Saturation multiplier, from 0 to 1. Use 1 to keep current saturation. vcoef (f...
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python
train
CI-WATER/mapkit
mapkit/RasterLoader.py
https://github.com/CI-WATER/mapkit/blob/ce5fbded6af7adabdf1eec85631c6811ef8ecc34/mapkit/RasterLoader.py#L181-L247
def makeSingleBandWKBRaster(cls, session, width, height, upperLeftX, upperLeftY, cellSizeX, cellSizeY, skewX, skewY, srid, dataArray, initialValue=None, noDataValue=None): """ Generate Well Known Binary via SQL. Must be used on a PostGIS database as it relies on several PostGIS database function...
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python
train
secynic/ipwhois
ipwhois/rdap.py
https://github.com/secynic/ipwhois/blob/b5d634d36b0b942d538d38d77b3bdcd815f155a0/ipwhois/rdap.py#L600-L661
def parse(self): """ The function for parsing the JSON response to the vars dictionary. """ try: self.vars['handle'] = self.json['handle'].strip() except (KeyError, ValueError, TypeError): raise InvalidEntityObject('Handle is missing for RDAP entity') ...
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The function for parsing the JSON response to the vars dictionary.
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python
train
MDAnalysis/GridDataFormats
gridData/OpenDX.py
https://github.com/MDAnalysis/GridDataFormats/blob/3eeb0432f8cf856912436e4f3e7aba99d3c916be/gridData/OpenDX.py#L462-L484
def write(self, filename): """Write the complete dx object to the file. This is the simple OpenDX format which includes the data into the header via the 'object array ... data follows' statement. Only simple regular arrays are supported. The format should be compatible with VM...
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Write the complete dx object to the file. This is the simple OpenDX format which includes the data into the header via the 'object array ... data follows' statement. Only simple regular arrays are supported. The format should be compatible with VMD's dx reader plugin.
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python
valid
ejeschke/ginga
ginga/canvas/transform.py
https://github.com/ejeschke/ginga/blob/a78c893ec6f37a837de851947e9bb4625c597915/ginga/canvas/transform.py#L166-L181
def from_(self, pct_pts): """Reverse of :meth:`to_`.""" pct_pts = np.asarray(pct_pts, dtype=np.float) has_z = (pct_pts.shape[-1] > 2) max_pt = list(self.viewer.get_window_size()) if has_z: max_pt.append(0.0) win_pts = np.multiply(pct_pts, max_pt) # ...
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Reverse of :meth:`to_`.
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python
train
PedalPi/PluginsManager
pluginsmanager/observer/observable_list.py
https://github.com/PedalPi/PluginsManager/blob/2dcc9f6a79b48e9c9be82efffd855352fa15c5c7/pluginsmanager/observer/observable_list.py#L149-L164
def move(self, item, new_position): """ Moves a item list to new position Calls observer ``self.observer(UpdateType.DELETED, item, index)`` and observer ``self.observer(UpdateType.CREATED, item, index)`` if ``val != self[index]`` :param item: Item that will be moved to ...
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Moves a item list to new position Calls observer ``self.observer(UpdateType.DELETED, item, index)`` and observer ``self.observer(UpdateType.CREATED, item, index)`` if ``val != self[index]`` :param item: Item that will be moved to new_position :param new_position: Item's new pos...
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python
train
artefactual-labs/mets-reader-writer
metsrw/fsentry.py
https://github.com/artefactual-labs/mets-reader-writer/blob/d95939cabdfdc25cb1bf67df0c84bd0d6e6a73ff/metsrw/fsentry.py#L243-L275
def _add_metadata_element(self, md, subsection, mdtype, mode="mdwrap", **kwargs): """ :param md: Value to pass to the MDWrap/MDRef :param str subsection: Metadata tag to create. See :const:`SubSection.ALLOWED_SUBSECTIONS` :param str mdtype: Value for mdWrap/mdRef @MDTYPE :param ...
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:param md: Value to pass to the MDWrap/MDRef :param str subsection: Metadata tag to create. See :const:`SubSection.ALLOWED_SUBSECTIONS` :param str mdtype: Value for mdWrap/mdRef @MDTYPE :param str mode: 'mdwrap' or 'mdref' :param str loctype: Required if mode is 'mdref'. LOCTYPE of a md...
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python
train
dusty-phillips/opterator
opterator.py
https://github.com/dusty-phillips/opterator/blob/84fe31f22c73dc0a3666ed82c179461b1799c257/opterator.py#L52-L78
def portable_argspec(func): ''' Given a function, return a tuple of (positional_params, keyword_params, varargs, defaults, annotations) where * positional_params is a list of parameters that don't have default values * keyword_params is a list of parameters that have default values * varargs...
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python
train
glenfant/openxmllib
openxmllib/document.py
https://github.com/glenfant/openxmllib/blob/c8208f8ecd9fc3ef1e73c1db68081a65361afb3f/openxmllib/document.py#L166-L175
def allProperties(self): """Helper that merges core, extended and custom properties :return: mapping of all properties """ rval = {} rval.update(self.coreProperties) rval.update(self.extendedProperties) rval.update(self.customProperties) return rval
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Helper that merges core, extended and custom properties :return: mapping of all properties
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python
train
DigitalGlobe/gbdxtools
gbdxtools/images/meta.py
https://github.com/DigitalGlobe/gbdxtools/blob/def62f8f2d77b168aa2bd115290aaa0f9a08a4bb/gbdxtools/images/meta.py#L260-L296
def pxbounds(self, geom, clip=False): """ Returns the bounds of a geometry object in pixel coordinates Args: geom: Shapely geometry object or GeoJSON as Python dictionary or WKT string clip (bool): Clip the bounds to the min/max extent of the image Returns: ...
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Returns the bounds of a geometry object in pixel coordinates Args: geom: Shapely geometry object or GeoJSON as Python dictionary or WKT string clip (bool): Clip the bounds to the min/max extent of the image Returns: list: bounds in pixels [min x, min y, max x, max y...
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python
valid
python-diamond/Diamond
src/diamond/handler/riemann.py
https://github.com/python-diamond/Diamond/blob/0f3eb04327d6d3ed5e53a9967d6c9d2c09714a47/src/diamond/handler/riemann.py#L69-L81
def get_default_config(self): """ Return the default config for the handler """ config = super(RiemannHandler, self).get_default_config() config.update({ 'host': '', 'port': 123, 'transport': 'tcp', }) return config
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Return the default config for the handler
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python
train
samirelanduk/quickplots
quickplots/series.py
https://github.com/samirelanduk/quickplots/blob/59f5e6ff367b2c1c24ba7cf1805d03552034c6d8/quickplots/series.py#L277-L290
def write_to_canvas(self, canvas, name): """Writes the series to an OmniCanvas canvas. :param Canvas canvas: The canvas to write to. :param str name: The name to give the line graphic on the canvas.""" points = self.canvas_points() args = [] for point in points: ...
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Writes the series to an OmniCanvas canvas. :param Canvas canvas: The canvas to write to. :param str name: The name to give the line graphic on the canvas.
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python
train
gwastro/pycbc
pycbc/inference/io/__init__.py
https://github.com/gwastro/pycbc/blob/7a64cdd104d263f1b6ea0b01e6841837d05a4cb3/pycbc/inference/io/__init__.py#L622-L648
def injections_from_cli(opts): """Gets injection parameters from the inference file(s). Parameters ---------- opts : argparser Argparser object that has the command-line objects to parse. Returns ------- FieldArray Array of the injection parameters from all of the input fil...
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Gets injection parameters from the inference file(s). Parameters ---------- opts : argparser Argparser object that has the command-line objects to parse. Returns ------- FieldArray Array of the injection parameters from all of the input files given by ``opts.input_file`...
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python
train
sorgerlab/indra
indra/tools/assemble_corpus.py
https://github.com/sorgerlab/indra/blob/79a70415832c5702d7a820c7c9ccc8e25010124b/indra/tools/assemble_corpus.py#L43-L78
def load_statements(fname, as_dict=False): """Load statements from a pickle file. Parameters ---------- fname : str The name of the pickle file to load statements from. as_dict : Optional[bool] If True and the pickle file contains a dictionary of statements, it is returned a...
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Load statements from a pickle file. Parameters ---------- fname : str The name of the pickle file to load statements from. as_dict : Optional[bool] If True and the pickle file contains a dictionary of statements, it is returned as a dictionary. If False, the statements are alway...
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python
train
googleapis/oauth2client
oauth2client/client.py
https://github.com/googleapis/oauth2client/blob/50d20532a748f18e53f7d24ccbe6647132c979a9/oauth2client/client.py#L829-L863
def _do_revoke(self, http, token): """Revokes this credential and deletes the stored copy (if it exists). Args: http: an object to be used to make HTTP requests. token: A string used as the token to be revoked. Can be either an access_token or refresh_token. ...
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Revokes this credential and deletes the stored copy (if it exists). Args: http: an object to be used to make HTTP requests. token: A string used as the token to be revoked. Can be either an access_token or refresh_token. Raises: TokenRevokeError: ...
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python
valid
libfuse/python-fuse
fuseparts/subbedopts.py
https://github.com/libfuse/python-fuse/blob/2c088b657ad71faca6975b456f80b7d2c2cea2a7/fuseparts/subbedopts.py#L59-L76
def filter(self, other): """ Throw away those options which are not in the other one. Returns a new instance with the rejected options. """ self.canonify() other.canonify() rej = self.__class__() rej.optlist = self.optlist.difference(other.optlist) ...
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Throw away those options which are not in the other one. Returns a new instance with the rejected options.
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python
train
wtsi-hgi/gitlab-build-variables
gitlabbuildvariables/executables/gitlab_set_variables.py
https://github.com/wtsi-hgi/gitlab-build-variables/blob/ed1afe50bc41fa20ffb29cacba5ff6dbc2446808/gitlabbuildvariables/executables/gitlab_set_variables.py#L21-L35
def _parse_args(args: List[str]) -> _SetArgumentsRunConfig: """ Parses the given CLI arguments to get a run configuration. :param args: CLI arguments :return: run configuration derived from the given CLI arguments """ parser = argparse.ArgumentParser( prog="gitlab-set-variables", descrip...
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Parses the given CLI arguments to get a run configuration. :param args: CLI arguments :return: run configuration derived from the given CLI arguments
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python
train
googleapis/google-cloud-python
pubsub/google/cloud/pubsub_v1/subscriber/_protocol/leaser.py
https://github.com/googleapis/google-cloud-python/blob/85e80125a59cb10f8cb105f25ecc099e4b940b50/pubsub/google/cloud/pubsub_v1/subscriber/_protocol/leaser.py#L92-L159
def maintain_leases(self): """Maintain all of the leases being managed. This method modifies the ack deadline for all of the managed ack IDs, then waits for most of that time (but with jitter), and repeats. """ while self._manager.is_active and not self._stop_event.is_se...
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Maintain all of the leases being managed. This method modifies the ack deadline for all of the managed ack IDs, then waits for most of that time (but with jitter), and repeats.
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python
train
zarr-developers/zarr
zarr/hierarchy.py
https://github.com/zarr-developers/zarr/blob/fb8e6d5ea6bc26e451e5cf0eaaee36977556d5b5/zarr/hierarchy.py#L388-L411
def groups(self): """Return an iterator over (name, value) pairs for groups only. Examples -------- >>> import zarr >>> g1 = zarr.group() >>> g2 = g1.create_group('foo') >>> g3 = g1.create_group('bar') >>> d1 = g1.create_dataset('baz', shape=100, chunks=1...
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Return an iterator over (name, value) pairs for groups only. Examples -------- >>> import zarr >>> g1 = zarr.group() >>> g2 = g1.create_group('foo') >>> g3 = g1.create_group('bar') >>> d1 = g1.create_dataset('baz', shape=100, chunks=10) >>> d2 = g1.create...
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python
train
daviddrysdale/python-phonenumbers
python/phonenumbers/phonenumberutil.py
https://github.com/daviddrysdale/python-phonenumbers/blob/9cc5bb4ab5e661e70789b4c64bf7a9383c7bdc20/python/phonenumbers/phonenumberutil.py#L2964-L3001
def _is_number_match_OO(numobj1_in, numobj2_in): """Takes two phone number objects and compares them for equality.""" # We only care about the fields that uniquely define a number, so we copy these across explicitly. numobj1 = _copy_core_fields_only(numobj1_in) numobj2 = _copy_core_fields_only(numobj2_i...
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Takes two phone number objects and compares them for equality.
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python
train
sethmlarson/virtualbox-python
virtualbox/library.py
https://github.com/sethmlarson/virtualbox-python/blob/706c8e3f6e3aee17eb06458e73cbb4bc2d37878b/virtualbox/library.py#L28501-L28511
def on_dn_d_mode_change(self, dnd_mode): """Notification when the drag'n drop mode changes. in dnd_mode of type :class:`DnDMode` The new mode for drag'n drop. """ if not isinstance(dnd_mode, DnDMode): raise TypeError("dnd_mode can only be an instance of type DnD...
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Notification when the drag'n drop mode changes. in dnd_mode of type :class:`DnDMode` The new mode for drag'n drop.
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python
train
odlgroup/odl
odl/operator/pspace_ops.py
https://github.com/odlgroup/odl/blob/b8443f6aca90e191ba36c91d32253c5a36249a6c/odl/operator/pspace_ops.py#L315-L386
def derivative(self, x): """Derivative of the product space operator. Parameters ---------- x : `domain` element The point to take the derivative in Returns ------- adjoint : linear`ProductSpaceOperator` The derivative Examples ...
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Derivative of the product space operator. Parameters ---------- x : `domain` element The point to take the derivative in Returns ------- adjoint : linear`ProductSpaceOperator` The derivative Examples -------- >>> r3 = odl...
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python
train
kinegratii/borax
borax/calendars/lunardate.py
https://github.com/kinegratii/borax/blob/921649f9277e3f657b6dea5a80e67de9ee5567f6/borax/calendars/lunardate.py#L288-L309
def get_term_info(year, month, day): """Parse solar term and stem-branch year/month/day from a solar date. (sy, sm, sd) => (term, next_gz_month) term for year 2101,:2101.1.5(初六) 小寒 2101.1.20(廿一) 大寒 """ if year == 2101: days = [5, 20] else: days = T...
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Parse solar term and stem-branch year/month/day from a solar date. (sy, sm, sd) => (term, next_gz_month) term for year 2101,:2101.1.5(初六) 小寒 2101.1.20(廿一) 大寒
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python
train
gem/oq-engine
openquake/hazardlib/gsim/edwards_fah_2013a.py
https://github.com/gem/oq-engine/blob/8294553a0b8aba33fd96437a35065d03547d0040/openquake/hazardlib/gsim/edwards_fah_2013a.py#L201-L208
def _compute_term_4(self, C, mag, R): """ (a16 + a17.*M + a18.*M.*M + a19.*M.*M.*M).*(d(r).^3) """ return ( (C['a16'] + C['a17'] * mag + C['a18'] * np.power(mag, 2) + C['a19'] * np.power(mag, 3)) * np.power(R, 3) )
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(a16 + a17.*M + a18.*M.*M + a19.*M.*M.*M).*(d(r).^3)
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python
train
codeinn/vcs
vcs/backends/git/repository.py
https://github.com/codeinn/vcs/blob/e6cd94188e9c36d273411bf3adc0584ac6ab92a0/vcs/backends/git/repository.py#L526-L574
def get_diff(self, rev1, rev2, path=None, ignore_whitespace=False, context=3): """ Returns (git like) *diff*, as plain text. Shows changes introduced by ``rev2`` since ``rev1``. :param rev1: Entry point from which diff is shown. Can be ``self.EMPTY_CHANGESET``...
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Returns (git like) *diff*, as plain text. Shows changes introduced by ``rev2`` since ``rev1``. :param rev1: Entry point from which diff is shown. Can be ``self.EMPTY_CHANGESET`` - in this case, patch showing all the changes since empty state of the repository until ``rev2`` ...
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python
train
doconix/django-mako-plus
django_mako_plus/filters.py
https://github.com/doconix/django-mako-plus/blob/a90f9b4af19e5fa9f83452989cdcaed21569a181/django_mako_plus/filters.py#L64-L124
def alternate_syntax(local, using, **kwargs): ''' A Mako filter that renders a block of text using a different template engine than Mako. The named template engine must be listed in settings.TEMPLATES. The template context variables are available in the embedded template. Specify kwargs to add add...
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A Mako filter that renders a block of text using a different template engine than Mako. The named template engine must be listed in settings.TEMPLATES. The template context variables are available in the embedded template. Specify kwargs to add additional variables created within the template. This i...
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python
train
mobinrg/rpi_spark_drives
JMRPiSpark/Drives/Audio/RPiAudio.py
https://github.com/mobinrg/rpi_spark_drives/blob/e1602d8268a5ef48e9e0a8b37de89e0233f946ea/JMRPiSpark/Drives/Audio/RPiAudio.py#L91-L115
def off(self): """! \~english Close Audio output. set pin mode to output @return a boolean value. if True means close audio output is OK otherwise failed to close. \~chinese 关闭音频输出。 将引脚模式设置为输出 @return 布尔值。 如果为 True 关闭音频输出成功,否则关闭不成功。 """ isOK = Tru...
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! \~english Close Audio output. set pin mode to output @return a boolean value. if True means close audio output is OK otherwise failed to close. \~chinese 关闭音频输出。 将引脚模式设置为输出 @return 布尔值。 如果为 True 关闭音频输出成功,否则关闭不成功。
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python
train
quintusdias/glymur
glymur/lib/openjpeg.py
https://github.com/quintusdias/glymur/blob/8b8fb091130fff00f1028dc82219e69e3f9baf6d/glymur/lib/openjpeg.py#L497-L516
def encode(cinfo, cio, image): """Wrapper for openjpeg library function opj_encode. Encodes an image into a JPEG-2000 codestream. Parameters ---------- cinfo : compression handle cio : output buffer stream image : image to encode """ argtypes = [ctypes.POINTER(CompressionInfoType...
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Wrapper for openjpeg library function opj_encode. Encodes an image into a JPEG-2000 codestream. Parameters ---------- cinfo : compression handle cio : output buffer stream image : image to encode
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python
train
matousc89/padasip
padasip/filters/rls.py
https://github.com/matousc89/padasip/blob/c969eadd7fa181a84da0554d737fc13c6450d16f/padasip/filters/rls.py#L208-L224
def adapt(self, d, x): """ Adapt weights according one desired value and its input. **Args:** * `d` : desired value (float) * `x` : input array (1-dimensional array) """ y = np.dot(self.w, x) e = d - y R1 = np.dot(np.dot(np.dot(self.R,x),x.T),se...
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Adapt weights according one desired value and its input. **Args:** * `d` : desired value (float) * `x` : input array (1-dimensional array)
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python
train
vallis/libstempo
libstempo/toasim.py
https://github.com/vallis/libstempo/blob/0b19300a9b24d64c9ddc25cd6ddbfd12b6231990/libstempo/toasim.py#L350-L360
def add_line(psr,f,A,offset=0.5): """ Add a line of frequency `f` [Hz] and amplitude `A` [s], with origin at a fraction `offset` through the dataset. """ t = psr.toas() t0 = offset * (N.max(t) - N.min(t)) sine = A * N.cos(2 * math.pi * f * day * (t - t0)) psr.stoas[:] += sine / day
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Add a line of frequency `f` [Hz] and amplitude `A` [s], with origin at a fraction `offset` through the dataset.
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python
train
apple/turicreate
deps/src/libxml2-2.9.1/python/libxml2.py
https://github.com/apple/turicreate/blob/74514c3f99e25b46f22c6e02977fe3da69221c2e/deps/src/libxml2-2.9.1/python/libxml2.py#L820-L826
def htmlParseFile(filename, encoding): """parse an HTML file and build a tree. Automatic support for ZLIB/Compress compressed document is provided by default if found at compile-time. """ ret = libxml2mod.htmlParseFile(filename, encoding) if ret is None:raise parserError('htmlParseFile() failed...
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parse an HTML file and build a tree. Automatic support for ZLIB/Compress compressed document is provided by default if found at compile-time.
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python
train
fbcotter/py3nvml
py3nvml/py3nvml.py
https://github.com/fbcotter/py3nvml/blob/47f0f2c0eee56dec4e4beebec26b734e01d357b7/py3nvml/py3nvml.py#L5333-L5369
def nvmlDeviceGetTopologyNearestGpus(device, level): r""" /** * Retrieve the set of GPUs that are nearest to a given device at a specific interconnectivity level * For all products. * Supported on Linux only. * * @param device The identifier of the first de...
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r""" /** * Retrieve the set of GPUs that are nearest to a given device at a specific interconnectivity level * For all products. * Supported on Linux only. * * @param device The identifier of the first device * @param level T...
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python
train
emory-libraries/eulxml
eulxml/xmlmap/fields.py
https://github.com/emory-libraries/eulxml/blob/17d71c7d98c0cebda9932b7f13e72093805e1fe2/eulxml/xmlmap/fields.py#L1187-L1221
def get_field(self, schema): """Get the requested type definition from the schema and return the appropriate :class:`~eulxml.xmlmap.fields.Field`. :param schema: instance of :class:`eulxml.xmlmap.core.XsdSchema` :rtype: :class:`eulxml.xmlmap.fields.Field` """ type = sche...
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python
train
radical-cybertools/radical.entk
src/radical/entk/execman/rp/task_processor.py
https://github.com/radical-cybertools/radical.entk/blob/945f6c93c9a62db90ad191b306418d5c1cdd9d24/src/radical/entk/execman/rp/task_processor.py#L423-L472
def create_task_from_cu(cu, prof=None): """ Purpose: Create a Task based on the Compute Unit. Details: Currently, only the uid, parent_stage and parent_pipeline are retrieved. The exact initial Task (that was converted to a CUD) cannot be recovered as the RP API does not provide the same attributes for...
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Purpose: Create a Task based on the Compute Unit. Details: Currently, only the uid, parent_stage and parent_pipeline are retrieved. The exact initial Task (that was converted to a CUD) cannot be recovered as the RP API does not provide the same attributes for a CU as for a CUD. Also, this is not required f...
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python
train
numenta/nupic
src/nupic/swarming/hypersearch/permutation_helpers.py
https://github.com/numenta/nupic/blob/5922fafffdccc8812e72b3324965ad2f7d4bbdad/src/nupic/swarming/hypersearch/permutation_helpers.py#L212-L236
def newPosition(self, globalBestPosition, rng): """See comments in base class.""" # First, update the velocity. The new velocity is given as: # v = (inertia * v) + (cogRate * r1 * (localBest-pos)) # + (socRate * r2 * (globalBest-pos)) # # where r1 and r2 are random numbers be...
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See comments in base class.
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python
valid
Dallinger/Dallinger
dallinger/data.py
https://github.com/Dallinger/Dallinger/blob/76ca8217c709989c116d0ebd8fca37bd22f591af/dallinger/data.py#L139-L145
def register(id, url=None): """Register a UUID key in the global S3 bucket.""" bucket = registration_s3_bucket() key = registration_key(id) obj = bucket.Object(key) obj.put(Body=url or "missing") return _generate_s3_url(bucket, key)
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Register a UUID key in the global S3 bucket.
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python
train
peterldowns/lggr
lggr/__init__.py
https://github.com/peterldowns/lggr/blob/622968f17133e02d9a46a4900dd20fb3b19fe961/lggr/__init__.py#L263-L268
def error(self, msg, *args, **kwargs): """ Log a message with ERROR level. Automatically includes stack and process info unless they are specifically not included. """ kwargs.setdefault('inc_stackinfo', True) kwargs.setdefault('inc_multiproc', True) self.log(ERROR, msg, args, **k...
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Log a message with ERROR level. Automatically includes stack and process info unless they are specifically not included.
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python
train
wbond/certbuilder
certbuilder/__init__.py
https://github.com/wbond/certbuilder/blob/969dae884fa7f73988bbf1dcbec4fb51e234a3c5/certbuilder/__init__.py#L688-L699
def ocsp_no_check(self, value): """ A bool - if the certificate should have the OCSP no check extension. Only applicable to certificates created for signing OCSP responses. Such certificates should normally be issued for a very short period of time since they are effectively whit...
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A bool - if the certificate should have the OCSP no check extension. Only applicable to certificates created for signing OCSP responses. Such certificates should normally be issued for a very short period of time since they are effectively whitelisted by clients.
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python
train
yamcs/yamcs-python
yamcs-client/yamcs/tmtc/client.py
https://github.com/yamcs/yamcs-python/blob/1082fee8a299010cc44416bbb7518fac0ef08b48/yamcs-client/yamcs/tmtc/client.py#L554-L589
def set_default_calibrator(self, parameter, type, data): # pylint: disable=W0622 """ Apply a calibrator while processing raw values of the specified parameter. If there is already a default calibrator associated to this parameter, that calibrator gets replaced. .. note:: ...
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Apply a calibrator while processing raw values of the specified parameter. If there is already a default calibrator associated to this parameter, that calibrator gets replaced. .. note:: Contextual calibrators take precedence over the default calibrator See :meth:`set_c...
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python
train
rmed/pyemtmad
pyemtmad/api/parking.py
https://github.com/rmed/pyemtmad/blob/c21c42d0c7b50035dfed29540d7e64ab67833728/pyemtmad/api/parking.py#L308-L329
def list_types_poi(self, **kwargs): """Obtain a list of families, types and categories of POI. Args: lang (str): Language code (*es* or *en*). Returns: Status boolean and parsed response (list[ParkingPoiType]), or message string in case of error. """...
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Obtain a list of families, types and categories of POI. Args: lang (str): Language code (*es* or *en*). Returns: Status boolean and parsed response (list[ParkingPoiType]), or message string in case of error.
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python
train
Asana/python-asana
asana/resources/gen/tasks.py
https://github.com/Asana/python-asana/blob/6deb7a34495db23f44858e53b6bb2c9eccff7872/asana/resources/gen/tasks.py#L241-L252
def remove_followers(self, task, params={}, **options): """Removes each of the specified followers from the task if they are following. Returns the complete, updated record for the affected task. Parameters ---------- task : {Id} The task to remove followers from. [data...
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Removes each of the specified followers from the task if they are following. Returns the complete, updated record for the affected task. Parameters ---------- task : {Id} The task to remove followers from. [data] : {Object} Data for the request - followers : {Array} An...
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python
train
af/turrentine
turrentine/views.py
https://github.com/af/turrentine/blob/bbbd5139744ccc6264595cc8960784e5c308c009/turrentine/views.py#L78-L89
def _try_url_with_appended_slash(self): """ Try our URL with an appended slash. If a CMS page is found at that URL, redirect to it. If no page is found at that URL, raise Http404. """ new_url_to_try = self.kwargs.get('path', '') + '/' if not new_url_to_try.startswith('/')...
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Try our URL with an appended slash. If a CMS page is found at that URL, redirect to it. If no page is found at that URL, raise Http404.
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python
train
ariebovenberg/gentools
gentools/core.py
https://github.com/ariebovenberg/gentools/blob/4a1f9f928c7f8b4752b69168858e83b4b23d6bcb/gentools/core.py#L351-L372
def imap_send(func, gen): """Apply a function to all ``send`` values of a generator Parameters ---------- func: ~typing.Callable[[T_send], T_mapped] the function to apply gen: Generable[T_yield, T_mapped, T_return] the generator iterable. Returns ------- ~typing.Generat...
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Apply a function to all ``send`` values of a generator Parameters ---------- func: ~typing.Callable[[T_send], T_mapped] the function to apply gen: Generable[T_yield, T_mapped, T_return] the generator iterable. Returns ------- ~typing.Generator[T_yield, T_send, T_return] ...
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python
valid
pypa/pipenv
pipenv/vendor/jinja2/nodes.py
https://github.com/pypa/pipenv/blob/cae8d76c210b9777e90aab76e9c4b0e53bb19cde/pipenv/vendor/jinja2/nodes.py#L219-L226
def set_environment(self, environment): """Set the environment for all nodes.""" todo = deque([self]) while todo: node = todo.popleft() node.environment = environment todo.extend(node.iter_child_nodes()) return self
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Set the environment for all nodes.
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python
train
mikedh/trimesh
trimesh/primitives.py
https://github.com/mikedh/trimesh/blob/25e059bf6d4caa74f62ffd58ce4f61a90ee4e518/trimesh/primitives.py#L639-L651
def direction(self): """ Based on the extrudes transform, what is the vector along which the polygon will be extruded Returns --------- direction: (3,) float vector. If self.primitive.transform is an identity matrix this will be [0.0, 0.0, 1.0] ...
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Based on the extrudes transform, what is the vector along which the polygon will be extruded Returns --------- direction: (3,) float vector. If self.primitive.transform is an identity matrix this will be [0.0, 0.0, 1.0]
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python
train
markovmodel/PyEMMA
pyemma/plots/plots2d.py
https://github.com/markovmodel/PyEMMA/blob/5c3124398217de05ba5ce9c8fb01519222481ab8/pyemma/plots/plots2d.py#L253-L377
def plot_map( x, y, z, ax=None, cmap=None, ncontours=100, vmin=None, vmax=None, levels=None, cbar=True, cax=None, cbar_label=None, cbar_orientation='vertical', norm=None, **kwargs): """Plot a two-dimensional map from data on a grid. Parameters ---------- x : ndar...
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Plot a two-dimensional map from data on a grid. Parameters ---------- x : ndarray(T) Binned x-coordinates. y : ndarray(T) Binned y-coordinates. z : ndarray(T) Binned z-coordinates. ax : matplotlib.Axes object, optional, default=None The ax to plot to; if ax=None,...
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python
train
trailofbits/manticore
manticore/core/smtlib/visitors.py
https://github.com/trailofbits/manticore/blob/54c5a15b1119c523ae54c09972413e8b97f11629/manticore/core/smtlib/visitors.py#L529-L539
def visit_BitVecShiftLeft(self, expression, *operands): """ a << 0 => a remove zero a << ct => 0 if ct > sizeof(a) remove big constant shift """ left = expression.operands[0] right = expression.operands[1] if isinstance(right, BitVecConstant):...
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a << 0 => a remove zero a << ct => 0 if ct > sizeof(a) remove big constant shift
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python
valid
waqasbhatti/astrobase
astrobase/services/dust.py
https://github.com/waqasbhatti/astrobase/blob/2922a14619d183fb28005fa7d02027ac436f2265/astrobase/services/dust.py#L88-L257
def extinction_query(lon, lat, coordtype='equatorial', sizedeg=5.0, forcefetch=False, cachedir='~/.astrobase/dust-cache', verbose=True, timeout=10.0, jitter=5.0): '''Thi...
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This queries the 2MASS DUST service to find the extinction parameters for the given `lon`, `lat`. Parameters ---------- lon,lat: float These are decimal right ascension and declination if `coordtype = 'equatorial'`. These are are decimal Galactic longitude and latitude if `coor...
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python
valid
saltstack/salt
salt/modules/twilio_notify.py
https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/modules/twilio_notify.py#L57-L67
def _get_twilio(profile): ''' Return the twilio connection ''' creds = __salt__['config.option'](profile) client = TwilioRestClient( creds.get('twilio.account_sid'), creds.get('twilio.auth_token'), ) return client
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Return the twilio connection
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python
train
gawel/aiocron
aiocron/__init__.py
https://github.com/gawel/aiocron/blob/949870b2f7fe1e10e4220f3243c9d4237255d203/aiocron/__init__.py#L71-L73
def get_next(self): """Return next iteration time related to loop time""" return self.loop_time + (self.croniter.get_next(float) - self.time)
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Return next iteration time related to loop time
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python
train
dw/mitogen
mitogen/parent.py
https://github.com/dw/mitogen/blob/a7fdb55e1300a7e0a5e404b09eb730cf9a525da7/mitogen/parent.py#L807-L819
def wstatus_to_str(status): """ Parse and format a :func:`os.waitpid` exit status. """ if os.WIFEXITED(status): return 'exited with return code %d' % (os.WEXITSTATUS(status),) if os.WIFSIGNALED(status): n = os.WTERMSIG(status) return 'exited due to signal %d (%s)' % (n, SIGNA...
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Parse and format a :func:`os.waitpid` exit status.
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python
train
brutasse/graphite-api
graphite_api/render/glyph.py
https://github.com/brutasse/graphite-api/blob/0886b7adcf985a1e8bcb084f6dd1dc166a3f3dff/graphite_api/render/glyph.py#L401-L446
def applySettings(self, axisMin=None, axisMax=None, axisLimit=None): """Apply the specified settings to this axis. Set self.minValue, self.minValueSource, self.maxValue, self.maxValueSource, and self.axisLimit reasonably based on the parameters provided. Arguments: axi...
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Apply the specified settings to this axis. Set self.minValue, self.minValueSource, self.maxValue, self.maxValueSource, and self.axisLimit reasonably based on the parameters provided. Arguments: axisMin -- a finite number, or None to choose a round minimum limit tha...
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python
train
ereOn/azmq
azmq/common.py
https://github.com/ereOn/azmq/blob/9f40d6d721eea7f7659ec6cc668811976db59854/azmq/common.py#L428-L441
def write_nowait(self, item): """ Write in the box in a non-blocking manner. If the box is full, an exception is thrown. You should always check for fullness with `full` or `wait_not_full` before calling this method. :param item: An item. """ self._queue.put_now...
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Write in the box in a non-blocking manner. If the box is full, an exception is thrown. You should always check for fullness with `full` or `wait_not_full` before calling this method. :param item: An item.
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python
train
cuihantao/andes
andes/models/base.py
https://github.com/cuihantao/andes/blob/7067898d4f26ce7534e968b8486c4aa8fe3a511a/andes/models/base.py#L1462-L1483
def _check_Vn(self): """Check data consistency of Vn and Vdcn if connected to Bus or Node :return None """ if hasattr(self, 'bus') and hasattr(self, 'Vn'): bus_Vn = self.read_data_ext('Bus', field='Vn', idx=self.bus) for name, bus, Vn, Vn0 in zip(self.name, self....
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Check data consistency of Vn and Vdcn if connected to Bus or Node :return None
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python
train
inspirehep/harvesting-kit
harvestingkit/bibrecord.py
https://github.com/inspirehep/harvesting-kit/blob/33a7f8aa9dade1d863110c6d8b27dfd955cb471f/harvestingkit/bibrecord.py#L1579-L1597
def _compare_fields(field1, field2, strict=True): """ Compare 2 fields. If strict is True, then the order of the subfield will be taken care of, if not then the order of the subfields doesn't matter. :return: True if the field are equivalent, False otherwise. """ if strict: # Retur...
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python
valid