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sdispater/orator | orator/dbal/index.py | https://github.com/sdispater/orator/blob/bd90bf198ee897751848f9a92e49d18e60a74136/orator/dbal/index.py#L103-L113 | def has_column_at_position(self, column_name, pos=0):
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mdscruggs/ga | ga/chromosomes.py | https://github.com/mdscruggs/ga/blob/adac7a004e5e22d888e44ab39f313064c3803b38/ga/chromosomes.py#L53-L72 | def dna(self, dna):
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Replace this chromosome's DNA with new DNA of equal length,
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Kentzo/git-archive-all | git_archive_all.py | https://github.com/Kentzo/git-archive-all/blob/fed1f48f1287c84220be08d63181a2816bde7a64/git_archive_all.py#L456-L480 | def get_git_version(cls):
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cloudera/cm_api | python/src/cm_api/endpoints/parcels.py | https://github.com/cloudera/cm_api/blob/5d2512375bd94684b4da36df9e0d9177865ffcbb/python/src/cm_api/endpoints/parcels.py#L24-L33 | def get_parcel(resource_root, product, version, cluster_name="default"):
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Lookup a parcel by name
@param resource_root: The root Resource object.
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airspeed-velocity/asv | asv/extern/asizeof.py | https://github.com/airspeed-velocity/asv/blob/d23bb8b74e8adacbfa3cf5724bda55fb39d56ba6/asv/extern/asizeof.py#L1020-L1029 | def format(self):
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trailofbits/manticore | manticore/native/cpu/x86.py | https://github.com/trailofbits/manticore/blob/54c5a15b1119c523ae54c09972413e8b97f11629/manticore/native/cpu/x86.py#L2952-L2982 | def LEAVE(cpu):
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consbio/ncdjango | ncdjango/interfaces/arcgis/form_fields.py | https://github.com/consbio/ncdjango/blob/f807bfd1e4083ab29fbc3c4d4418be108383a710/ncdjango/interfaces/arcgis/form_fields.py#L47-L92 | def to_python(self, value):
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Azure/azure-cli-extensions | src/botservice/azext_bot/custom.py | https://github.com/Azure/azure-cli-extensions/blob/3d4854205b0f0d882f688cfa12383d14506c2e35/src/botservice/azext_bot/custom.py#L21-L38 | def __install_node_dependencies(kudu_client):
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jgorset/django-respite | respite/decorators.py | https://github.com/jgorset/django-respite/blob/719469d11baf91d05917bab1623bd82adc543546/respite/decorators.py#L24-L52 | def route(regex, method, name):
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Route the decorated view.
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nornir-automation/nornir | nornir/core/connections.py | https://github.com/nornir-automation/nornir/blob/3425c47fd870db896cb80f619bae23bd98d50c74/nornir/core/connections.py#L30-L44 | def open(
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nickjj/ansigenome | ansigenome/export.py | https://github.com/nickjj/ansigenome/blob/70cd98d7a23d36c56f4e713ea820cfb4c485c81c/ansigenome/export.py#L182-L189 | def exit_if_missing_graphviz(self):
"""
Detect the presence of the dot utility to make a png graph.
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idlesign/django-sitetree | sitetree/admin.py | https://github.com/idlesign/django-sitetree/blob/61de4608e6e415247c75fe8691027d7c4ed0d1e7/sitetree/admin.py#L207-L214 | def get_tree(self, request, tree_id, item_id=None):
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secdev/scapy | scapy/contrib/dce_rpc.py | https://github.com/secdev/scapy/blob/3ffe757c184017dd46464593a8f80f85abc1e79a/scapy/contrib/dce_rpc.py#L145-L152 | def dispatch_hook(cls, _pkt, _underlayer=None, *args, **kargs):
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shidenggui/easytrader | easytrader/webtrader.py | https://github.com/shidenggui/easytrader/blob/e5ae4daeda4ea125763a95b280dd694c7f68257d/easytrader/webtrader.py#L40-L54 | def prepare(self, config_file=None, user=None, password=None, **kwargs):
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tallforasmurf/byteplay | byteplay3.py | https://github.com/tallforasmurf/byteplay/blob/f6189df69dea763c83e857150244a8a89c082cc2/byteplay3.py#L243-L253 | def object_attributes( thing, all=False ) :
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pypa/pipenv | pipenv/vendor/semver.py | https://github.com/pypa/pipenv/blob/cae8d76c210b9777e90aab76e9c4b0e53bb19cde/pipenv/vendor/semver.py#L41-L73 | def parse(version):
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cronofy/pycronofy | pycronofy/pagination.py | https://github.com/cronofy/pycronofy/blob/3d807603029478fa9387a9dfb6c3acd9faa4f08e/pycronofy/pagination.py#L27-L37 | def all(self):
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csparpa/pyowm | pyowm/weatherapi25/parsers/stationlistparser.py | https://github.com/csparpa/pyowm/blob/cdd59eb72f32f7238624ceef9b2e2329a5ebd472/pyowm/weatherapi25/parsers/stationlistparser.py#L20-L39 | def parse_JSON(self, JSON_string):
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davenquinn/Attitude | attitude/error/axes.py | https://github.com/davenquinn/Attitude/blob/2ce97b9aba0aa5deedc6617c2315e07e6396d240/attitude/error/axes.py#L108-L146 | def statistical_axes(fit, **kw):
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broadinstitute/fiss | firecloud/supervisor.py | https://github.com/broadinstitute/fiss/blob/dddf91547479506dbbafb69ec84d44dcc4a94ab4/firecloud/supervisor.py#L78-L128 | def validate_monitor_tasks(dependencies, args):
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pydata/xarray | xarray/backends/file_manager.py | https://github.com/pydata/xarray/blob/6d93a95d05bdbfc33fff24064f67d29dd891ab58/xarray/backends/file_manager.py#L151-L178 | def acquire(self, needs_lock=True):
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asweigart/pyautogui | pyautogui/__init__.py | https://github.com/asweigart/pyautogui/blob/77524bd47334a89024013fd48e05151c3ac9289a/pyautogui/__init__.py#L1067-L1098 | def hotkey(*args, **kwargs):
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avirshup/DockerMake | dockermake/builds.py | https://github.com/avirshup/DockerMake/blob/2173199904f086353ef539ea578788b99f6fea0a/dockermake/builds.py#L64-L119 | def build(self, client,
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tomplus/kubernetes_asyncio | kubernetes_asyncio/client/api/core_v1_api.py | https://github.com/tomplus/kubernetes_asyncio/blob/f9ab15317ec921409714c7afef11aeb0f579985d/kubernetes_asyncio/client/api/core_v1_api.py#L4035-L4057 | def connect_post_namespaced_pod_proxy(self, name, namespace, **kwargs): # noqa: E501
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cons3rt/pycons3rt | pycons3rt/asset.py | https://github.com/cons3rt/pycons3rt/blob/f004ab3a35c5bff2f698131fef3b2a8ed5a7596d/pycons3rt/asset.py#L122-L253 | def validate_asset_structure(asset_dir_path):
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inveniosoftware/invenio-access | invenio_access/cli.py | https://github.com/inveniosoftware/invenio-access/blob/3b033a4bdc110eb2f7e9f08f0744a780884bfc80/invenio_access/cli.py#L130-L134 | def process_allow_action(processors, action, argument):
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OLC-Bioinformatics/sipprverse | sixteenS/sixteens_full.py | https://github.com/OLC-Bioinformatics/sipprverse/blob/d4f10cdf8e1a39dac0953db61c21c97efc6006de/sixteenS/sixteens_full.py#L31-L38 | def main(self):
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edeposit/edeposit.amqp | bin/edeposit_amqp_tool.py | https://github.com/edeposit/edeposit.amqp/blob/7804b52028b90ab96302d54bc2430f88dc2ebf64/bin/edeposit_amqp_tool.py#L158-L183 | def send_message(host, data, timeout=None, properties=None):
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soravux/scoop | scoop/futures.py | https://github.com/soravux/scoop/blob/d391dfa62f47e49d48328ee9cf08aa114256fd33/scoop/futures.py#L259-L279 | def _createFuture(func, *args, **kwargs):
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booktype/python-ooxml | ooxml/parse.py | https://github.com/booktype/python-ooxml/blob/b56990a5bee2e1bc46839cec5161ff3726dc4d87/ooxml/parse.py#L446-L468 | def parse_document(xmlcontent):
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msiemens/PyGitUp | PyGitUp/gitup.py | https://github.com/msiemens/PyGitUp/blob/b1f78831cb6b8d29d3a7d59f7a2b54fdd0720e9c/PyGitUp/gitup.py#L555-L576 | def check_bundler(self):
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ConsenSys/mythril-classic | mythril/laser/smt/__init__.py | https://github.com/ConsenSys/mythril-classic/blob/27af71c34b2ce94f4fae5613ec457f93df1a8f56/mythril/laser/smt/__init__.py#L138-L147 | def BitVecFuncVal(
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reillysiemens/layabout | examples/early-connection/example.py | https://github.com/reillysiemens/layabout/blob/a146c47f2558e66bb51cf708d39909b93eaea7f4/examples/early-connection/example.py#L15-L28 | def channel_to_id(slack, channel):
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datacamp/antlr-ast | antlr_ast/marshalling.py | https://github.com/datacamp/antlr-ast/blob/d08d5eb2e663bd40501d0eeddc8a731ac7e96b11/antlr_ast/marshalling.py#L27-L38 | def decode_ast(registry, ast_json):
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twilio/twilio-python | twilio/rest/api/v2010/account/token.py | https://github.com/twilio/twilio-python/blob/c867895f55dcc29f522e6e8b8868d0d18483132f/twilio/rest/api/v2010/account/token.py#L35-L52 | def create(self, ttl=values.unset):
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brocade/pynos | pynos/versions/ver_6/ver_6_0_1/yang/brocade_port_profile_ext.py | https://github.com/brocade/pynos/blob/bd8a34e98f322de3fc06750827d8bbc3a0c00380/pynos/versions/ver_6/ver_6_0_1/yang/brocade_port_profile_ext.py#L260-L275 | def get_port_profile_status_output_port_profile_mac_association_mac(self, **kwargs):
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lrq3000/pyFileFixity | pyFileFixity/lib/profilers/visual/pympler/muppy.py | https://github.com/lrq3000/pyFileFixity/blob/fd5ef23bb13835faf1e3baa773619b86a1cc9bdf/pyFileFixity/lib/profilers/visual/pympler/muppy.py#L136-L154 | def get_referents(object, level=1):
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adrn/gala | gala/coordinates/greatcircle.py | https://github.com/adrn/gala/blob/ea95575a0df1581bb4b0986aebd6eea8438ab7eb/gala/coordinates/greatcircle.py#L34-L70 | def reference_to_greatcircle(reference_frame, greatcircle_frame):
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angr/angr | angr/exploration_techniques/director.py | https://github.com/angr/angr/blob/4e2f97d56af5419ee73bdb30482c8dd8ff5f3e40/angr/exploration_techniques/director.py#L434-L456 | def _peek_forward(self, simgr):
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eventbrite/eventbrite-sdk-python | eventbrite/access_methods.py | https://github.com/eventbrite/eventbrite-sdk-python/blob/f2e5dc5aa1aa3e45766de13f16fd65722163d91a/eventbrite/access_methods.py#L475-L484 | def post_series_cancel(self, id, **data):
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mlavin/argyle | argyle/system.py | https://github.com/mlavin/argyle/blob/92cc6e1dd9b8e7cb41c5098a79d05e14b8243d72/argyle/system.py#L91-L107 | def add_sources_from_file(file_name, update=True):
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Add source urls from a file list.
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deb http://example.com/deb lucid main (http://example.com/key)
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greenelab/PathCORE-T | pathcore/network.py | https://github.com/greenelab/PathCORE-T/blob/9d079d5ebffea2fe9fb9ab557588d51ad67d2c9c/pathcore/network.py#L249-L276 | def aggregate(self, merge):
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Fantomas42/django-blog-zinnia | zinnia/moderator.py | https://github.com/Fantomas42/django-blog-zinnia/blob/b4949304b104a8e1a7a7a0773cbfd024313c3a15/zinnia/moderator.py#L68-L92 | def do_email_notification(self, comment, entry, site):
"""
Send email notification of a new comment to site staff.
"""
if not self.mail_comment_notification_recipients:
return
template = loader.get_template(
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gtaylor/python-colormath | colormath/color_diff_matrix.py | https://github.com/gtaylor/python-colormath/blob/1d168613718d2d7d31ec4230524e987ef66823c7/colormath/color_diff_matrix.py#L21-L56 | def delta_e_cie1994(lab_color_vector, lab_color_matrix,
K_L=1, K_C=1, K_H=1, K_1=0.045, K_2=0.015):
"""
Calculates the Delta E (CIE1994) of two colors.
K_l:
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K_2:
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0.014 textiles
K_L:
1 default
... | [
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rueckstiess/mtools | mtools/mplotqueries/plottypes/histogram_type.py | https://github.com/rueckstiess/mtools/blob/a6a22910c3569c0c8a3908660ca218a4557e4249/mtools/mplotqueries/plottypes/histogram_type.py#L153-L159 | def clicked(self, event):
"""Print group name and number of items in bin."""
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n = event.artist._mt_n
dt = num2date(event.artist._mt_bin)
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RedFantom/ttkwidgets | ttkwidgets/table.py | https://github.com/RedFantom/ttkwidgets/blob/02150322060f867b6e59a175522ef84b09168019/ttkwidgets/table.py#L377-L411 | def column(self, column, option=None, **kw):
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Query or modify the options for the specified column.
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PyCQA/astroid | astroid/node_classes.py | https://github.com/PyCQA/astroid/blob/e0a298df55b15abcb77c2a93253f5ab7be52d0fb/astroid/node_classes.py#L1616-L1634 | def is_argument(self, name):
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datadotworld/data.world-py | datadotworld/client/api.py | https://github.com/datadotworld/data.world-py/blob/ffaeb115f358731ab0b805b0c43b7ff2e3cf0a77/datadotworld/client/api.py#L834-L891 | def create_project(self, owner_id, **kwargs):
"""Create a new project
:param owner_id: Username of the creator of a
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mandiant/ioc_writer | ioc_writer/ioc_api.py | https://github.com/mandiant/ioc_writer/blob/712247f3a10bdc2584fa18ac909fc763f71df21a/ioc_writer/ioc_api.py#L227-L251 | def add_parameter(self, indicator_id, content, name='comment', ptype='string'):
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kmadac/bitstamp-python-client | bitstamp/client.py | https://github.com/kmadac/bitstamp-python-client/blob/35b9a61f3892cc281de89963d210f7bd5757c717/bitstamp/client.py#L248-L269 | def user_transactions(self, offset=0, limit=100, descending=True,
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"""
Returns descending list of transactions. Every transaction (dictionary)
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{u'usd': u'-39.25',
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spyder-ide/spyder | spyder/app/mainwindow.py | https://github.com/spyder-ide/spyder/blob/f76836ce1b924bcc4efd3f74f2960d26a4e528e0/spyder/app/mainwindow.py#L2741-L2755 | def open_file(self, fname, external=False):
"""
Open filename with the appropriate application
Redirect to the right widget (txt -> editor, spydata -> workspace, ...)
or open file outside Spyder (if extension is not supported)
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fname = to_text_string(fname)
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iotile/coretools | iotilebuild/iotile/build/config/scons-local-3.0.1/SCons/Environment.py | https://github.com/iotile/coretools/blob/2d794f5f1346b841b0dcd16c9d284e9bf2f3c6ec/iotilebuild/iotile/build/config/scons-local-3.0.1/SCons/Environment.py#L597-L604 | def AddMethod(self, function, name=None):
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log2timeline/dfvfs | dfvfs/file_io/file_io.py | https://github.com/log2timeline/dfvfs/blob/2b3ccd115f9901d89f383397d4a1376a873c83c4/dfvfs/file_io/file_io.py#L55-L84 | def open(self, path_spec=None, mode='rb'):
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saltstack/salt | salt/modules/yumpkg.py | https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/modules/yumpkg.py#L3252-L3286 | def complete_transaction(cleanup_only=False, recursive=False, max_attempts=3):
'''
.. versionadded:: Fluorine
Execute ``yum-complete-transaction``, which is provided by the ``yum-utils`` package.
cleanup_only
Specify if the ``--cleanup-only`` option should be supplied.
recursive
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alpacahq/alpaca-trade-api-python | alpaca_trade_api/rest.py | https://github.com/alpacahq/alpaca-trade-api-python/blob/9c9dea3b4a37c909f88391b202e86ff356a8b4d7/alpaca_trade_api/rest.py#L220-L227 | def list_assets(self, status=None, asset_class=None):
'''Get a list of assets'''
params = {
'status': status,
'assert_class': asset_class,
}
resp = self.get('/assets', params)
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jaraco/svg.charts | svg/charts/graph.py | https://github.com/jaraco/svg.charts/blob/23053497b3f1af4e760f355050107ae3bc05909d/svg/charts/graph.py#L470-L480 | def draw_y_guidelines(self, label_height, count):
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return
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move = 'M 0 {start} h{stop}'.format(
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DiamondLightSource/python-workflows | workflows/services/common_service.py | https://github.com/DiamondLightSource/python-workflows/blob/7ef47b457655b96f4d2ef7ee9863cf1b6d20e023/workflows/services/common_service.py#L435-L456 | def process_uncaught_exception(self, e):
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The service will terminate either way, but here we can do things such as
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portfors-lab/sparkle | sparkle/gui/plotting/pyqtgraph_widgets.py | https://github.com/portfors-lab/sparkle/blob/5fad1cf2bec58ec6b15d91da20f6236a74826110/sparkle/gui/plotting/pyqtgraph_widgets.py#L483-L496 | def editColormap(self):
"""Prompts the user with a dialog to change colormap"""
self.editor = pg.ImageView()
# remove the ROI and Norm buttons
self.editor.ui.roiBtn.setVisible(False)
self.editor.ui.menuBtn.setVisible(False)
self.editor.setImage(self.imageArray)
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pytroll/pyspectral | pyspectral/rayleigh.py | https://github.com/pytroll/pyspectral/blob/fd296c0e0bdf5364fa180134a1292665d6bc50a3/pyspectral/rayleigh.py#L195-L208 | def get_reflectance_lut(self):
"""Read the LUT with reflectances as a function of wavelength, satellite zenith
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"""
if self._rayl is None:
lut_vars = get_reflectance_lut(self.reflectance_lut_filename)
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acsone/bobtemplates.odoo | bobtemplates/odoo/hooks.py | https://github.com/acsone/bobtemplates.odoo/blob/6e8c3cb12747d8b5af5a9821f995f285251e4d4d/bobtemplates/odoo/hooks.py#L58-L68 | def _insert_manifest_item(configurator, key, item):
""" Insert an item in the list of an existing manifest key """
with _open_manifest(configurator) as f:
manifest = f.read()
if item in ast.literal_eval(manifest).get(key, []):
return
pattern = """(["']{}["']:\\s*\\[)""".format(key)
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pyviz/holoviews | holoviews/plotting/mpl/util.py | https://github.com/pyviz/holoviews/blob/ae0dd2f3de448b0ca5e9065aabd6ef8d84c7e655/holoviews/plotting/mpl/util.py#L35-L47 | def is_color(color):
"""
Checks if supplied object is a valid color spec.
"""
if not isinstance(color, basestring):
return False
elif RGB_HEX_REGEX.match(color):
return True
elif color in COLOR_ALIASES:
return True
elif color in cnames:
return True
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saltstack/salt | salt/template.py | https://github.com/saltstack/salt/blob/e8541fd6e744ab0df786c0f76102e41631f45d46/salt/template.py#L153-L186 | def template_shebang(template, renderers, default, blacklist, whitelist, input_data):
'''
Check the template shebang line and return the list of renderers specified
in the pipe.
Example shebang lines::
#!yaml_jinja
#!yaml_mako
#!mako|yaml
#!jinja|yaml
#!jinja|mako|yaml
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casastorta/python-sar | sar/parser.py | https://github.com/casastorta/python-sar/blob/e6d8bb86524102d677f37e985302fad34e3297c1/sar/parser.py#L216-L272 | def _parse_file(self, sar_parts):
"""
Parses splitted file to get proper information from split parts.
:param sar_parts: Array of SAR file parts
:return: ``Dictionary``-style info (but still non-parsed) \
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sods/ods | pods/datasets.py | https://github.com/sods/ods/blob/3995c659f25a0a640f6009ed7fcc2559ce659b1d/pods/datasets.py#L519-L540 | def epomeo_gpx(data_set='epomeo_gpx', sample_every=4):
"""Data set of three GPS traces of the same movement on Mt Epomeo in Ischia. Requires gpxpy to run."""
import gpxpy
import gpxpy.gpx
if not data_available(data_set):
download_data(data_set)
files = ['endomondo_1', 'endomondo_2', 'garmin_... | [
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C-Pro/pgdocgen | pgdocgen/utils.py | https://github.com/C-Pro/pgdocgen/blob/b5d95c1bc1b38e3c7977aeddc20793a7b0f5d0fe/pgdocgen/utils.py#L41-L56 | def init_logging(settings):
'''Set up logger'''
lg_format = '%(asctime)s : - %(message)s'
lg_dateformat = '%Y.%m.%d %H:%M:%S'
logging.basicConfig(format=lg_format, datefmt=lg_dateformat)
log = get_logger()
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alephdata/pantomime | pantomime/__init__.py | https://github.com/alephdata/pantomime/blob/818fe5d799ba045c1d908935f24c94a8438c3a60/pantomime/__init__.py#L19-L26 | def useful_mimetype(text):
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if text is None:
return False
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HumanBrainProject/hbp-service-client | hbp_service_client/storage_service/client.py | https://github.com/HumanBrainProject/hbp-service-client/blob/b338fb41a7f0e7b9d654ff28fcf13a56d03bff4d/hbp_service_client/storage_service/client.py#L167-L185 | def mkdir(self, path):
'''Create a folder in the storage service pointed by the given path.
Args:
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Raises:
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pivotal-energy-solutions/django-datatable-view | datatableview/utils.py | https://github.com/pivotal-energy-solutions/django-datatable-view/blob/00b77a9b5051c34e258c51b06c020e92edf15034/datatableview/utils.py#L72-L88 | def get_model_at_related_field(model, attr):
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Looks up ``attr`` as a field of ``model`` and returns the related model class. If ``attr`` is
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field = model._meta.get_field(attr)
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poldracklab/niworkflows | niworkflows/utils/bids.py | https://github.com/poldracklab/niworkflows/blob/254f4b4fcc5e6ecb29d2f4602a30786b913ecce5/niworkflows/utils/bids.py#L217-L306 | def group_multiecho(bold_sess):
"""
Multiplexes multi-echo EPIs into arrays. Dual-echo is a special
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>>> bold_sess = ["sub-01_task-rest_echo-1_run-01_bold.nii.gz",
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jeffbuttars/upkg | upkg/conf.py | https://github.com/jeffbuttars/upkg/blob/7d65a0b2eb4469aac5856b963ef2d429f2920dae/upkg/conf.py#L7-L19 | def _clean_path(p):
"""todo: Docstring for _clen_path
:param p: arg description
:type p: type description
:return:
:rtype:
"""
np = os.path.expanduser(p)
np = os.path.abspath(np)
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PMEAL/OpenPNM | openpnm/topotools/topotools.py | https://github.com/PMEAL/OpenPNM/blob/0547b5724ffedc0a593aae48639d36fe10e0baed/openpnm/topotools/topotools.py#L292-L326 | def find_connecting_bonds(sites, am):
r"""
Given pairs of sites, finds the bonds which connects each pair.
Parameters
----------
sites : array_like
A 2-column vector containing pairs of site indices on each row.
am : scipy.sparse matrix
The adjacency matrix of the network. Mus... | [
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sites : array_like
A 2-column vector containing pairs of site indices on each row.
am : scipy.sparse matrix
The adjacency matrix of the network. Must be symmetrical such that if
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PythonCharmers/python-future | src/future/standard_library/__init__.py | https://github.com/PythonCharmers/python-future/blob/c423752879acc05eebc29b0bb9909327bd5c7308/src/future/standard_library/__init__.py#L429-L440 | def restore_sys_modules(scrubbed):
"""
Add any previously scrubbed modules back to the sys.modules cache,
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"""
clash = set(sys.modules) & set(scrubbed)
if len(clash) != 0:
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openstates/billy | billy/utils/__init__.py | https://github.com/openstates/billy/blob/5fc795347f12a949e410a8cfad0c911ea6bced67/billy/utils/__init__.py#L147-L158 | def cd(path):
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CI-WATER/gsshapy | gsshapy/modeling/event.py | https://github.com/CI-WATER/gsshapy/blob/00fd4af0fd65f1614d75a52fe950a04fb0867f4c/gsshapy/modeling/event.py#L497-L506 | def _update_gmt(self):
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tanghaibao/jcvi | jcvi/assembly/kmer.py | https://github.com/tanghaibao/jcvi/blob/d2e31a77b6ade7f41f3b321febc2b4744d1cdeca/jcvi/assembly/kmer.py#L611-L632 | def bin(args):
"""
%prog bin filename filename.bin
Serialize counts to bitarrays.
"""
from bitarray import bitarray
p = OptionParser(bin.__doc__)
opts, args = p.parse_args(args)
if len(args) != 2:
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user-cont/conu | conu/backend/k8s/pod.py | https://github.com/user-cont/conu/blob/08caae7bb6bdd265b55bb106c3da6a7946a5a352/conu/backend/k8s/pod.py#L79-L95 | def delete(self):
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cohorte/cohorte-herald | python/snippets/herald_irc/client.py | https://github.com/cohorte/cohorte-herald/blob/bb3445d0031c8b3abad71e6219cc559b49faa3ee/python/snippets/herald_irc/client.py#L117-L122 | def wait(self, timeout=None):
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Waits for the client to stop its loop
"""
self.__stopped.wait(timeout)
return self.__stopped.is_set() | [
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rootpy/rootpy | rootpy/plotting/root2matplotlib.py | https://github.com/rootpy/rootpy/blob/3926935e1f2100d8ba68070c2ab44055d4800f73/rootpy/plotting/root2matplotlib.py#L141-L265 | def hist(hists,
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quantmind/pulsar | pulsar/apps/wsgi/routers.py | https://github.com/quantmind/pulsar/blob/fee44e871954aa6ca36d00bb5a3739abfdb89b26/pulsar/apps/wsgi/routers.py#L326-L350 | def _resolve(self, path, method, urlargs=None):
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match = self.route.match(path)
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RedHatInsights/insights-core | insights/contrib/soscleaner.py | https://github.com/RedHatInsights/insights-core/blob/b57cbf8ed7c089672426ede0441e0a4f789ef4a1/insights/contrib/soscleaner.py#L570-L601 | def _clean_file(self, f):
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xenadevel/PyXenaManager | xenamanager/xena_app.py | https://github.com/xenadevel/PyXenaManager/blob/384ca265f73044b8a8b471f5dd7a6103fc54f4df/xenamanager/xena_app.py#L258-L269 | def inventory(self, modules_inventory=False):
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self.c_info = self.get_attributes()
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lltk/lltk | lltk/scraping.py | https://github.com/lltk/lltk/blob/d171de55c1b97695fddedf4b02401ae27bf1d634/lltk/scraping.py#L147-L154 | def merge(self, elements):
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pycontribs/pyrax | pyrax/object_storage.py | https://github.com/pycontribs/pyrax/blob/9ddfd5064b3a292d7337906f3b2d5dce95b50b99/pyrax/object_storage.py#L2256-L2261 | def _configure_manager(self):
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python-openxml/python-docx | docx/image/jpeg.py | https://github.com/python-openxml/python-docx/blob/6756f6cd145511d3eb6d1d188beea391b1ddfd53/docx/image/jpeg.py#L128-L135 | def app1(self):
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First APP1 marker in image markers.
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ARMmbed/autoversion | src/auto_version/semver.py | https://github.com/ARMmbed/autoversion/blob/c5b127d2059c8219f5637fe45bf9e1be3a0af2aa/src/auto_version/semver.py#L53-L71 | def make_new_semver(current_semver, all_triggers, **overrides):
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new_semver = {}
bumped = False
for sig_fig in SemVerSigFig: # iterate sig figs in order of significance
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newville/wxmplot | wxmplot/stackedplotframe.py | https://github.com/newville/wxmplot/blob/8e0dc037453e5cdf18c968dc5a3d29efd761edee/wxmplot/stackedplotframe.py#L38-L45 | def plot(self, x, y, panel='top', xlabel=None, **kws):
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hammerlab/cohorts | cohorts/cohort.py | https://github.com/hammerlab/cohorts/blob/278b05e609e6c4d4a77c57d49446460be53ea33e/cohorts/cohort.py#L572-L626 | def _load_single_patient_variants(self, patient, filter_fn, use_cache=True, **kwargs):
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openvax/datacache | datacache/cache.py | https://github.com/openvax/datacache/blob/73bcac02d37cf153710a07fbdc636aa55cb214ca/datacache/cache.py#L74-L104 | def fetch(
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SBRG/ssbio | ssbio/protein/structure/homology/itasser/itasserprep.py | https://github.com/SBRG/ssbio/blob/e9449e64ffc1a1f5ad07e5849aa12a650095f8a2/ssbio/protein/structure/homology/itasser/itasserprep.py#L107-L120 | def prep_folder(self, seq):
"""Take in a sequence string and prepares the folder for the I-TASSER run."""
itasser_dir = op.join(self.root_dir, self.id)
if not op.exists(itasser_dir):
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tmp = {self.id: seq}
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tilde-lab/tilde | tilde/core/settings.py | https://github.com/tilde-lab/tilde/blob/59841578b3503075aa85c76f9ae647b3ff92b0a3/tilde/core/settings.py#L126-L177 | def get_hierarchy(settings):
'''
Gets main mapping source according to what a data classification is made
Gets the hierarchy groups (only for GUI)
Gets the hierarchy values
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hierarchy, hierarchy_groups, hierarchy_values = [], [], {}
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] | python | train |
ui/django-post_office | post_office/utils.py | https://github.com/ui/django-post_office/blob/03e1ffb69829b475402f0f3ecd9f8a90af7da4bd/post_office/utils.py#L13-L34 | def send_mail(subject, message, from_email, recipient_list, html_message='',
scheduled_time=None, headers=None, priority=PRIORITY.medium):
"""
Add a new message to the mail queue. This is a replacement for Django's
``send_mail`` core email method.
"""
subject = force_text(subject)
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FutunnOpen/futuquant | futuquant/examples/TinyQuant/FutuDataEvent.py | https://github.com/FutunnOpen/futuquant/blob/1512b321845f92ec9c578ce2689aa4e8482669e4/futuquant/examples/TinyQuant/FutuDataEvent.py#L332-L363 | def process_quote(self, data):
"""报价推送"""
for ix, row in data.iterrows():
symbol = row['code']
tick = self._tick_dict.get(symbol, None)
if not tick:
tick = TinyQuoteData()
tick.symbol = symbol
self._tick_dict[symbol] = ... | [
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openstack/networking-arista | networking_arista/common/db_lib.py | https://github.com/openstack/networking-arista/blob/07ce6b1fc62ff74308a6eabfc4cc0ee09fb7b0fe/networking_arista/common/db_lib.py#L71-L78 | def filter_network_type(query):
"""Filter unsupported segment types"""
segment_model = segment_models.NetworkSegment
query = (query
.filter(
segment_model.network_type.in_(
utils.SUPPORTED_NETWORK_TYPES)))
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hammerlab/cohorts | cohorts/varcode_utils.py | https://github.com/hammerlab/cohorts/blob/278b05e609e6c4d4a77c57d49446460be53ea33e/cohorts/varcode_utils.py#L107-L157 | def filter_effects(effect_collection, variant_collection, patient, filter_fn, all_effects, **kwargs):
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Parameters
----------
effect_collection : varcode.EffectCollection
variant_collection : varcode.VariantCollection
patient : cohorts.Patient
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zenodo/zenodo-accessrequests | zenodo_accessrequests/tokens.py | https://github.com/zenodo/zenodo-accessrequests/blob/ce2cf3f1425d02ba4f3ad3202cfca43a1892558a/zenodo_accessrequests/tokens.py#L98-L109 | def engine(self):
"""Get cryptographic engine."""
if not hasattr(self, '_engine'):
from cryptography.fernet import Fernet
from cryptography.hazmat.backends import default_backend
from cryptography.hazmat.primitives import hashes
digest = hashes.Hash(hashe... | [
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Valassis-Digital-Media/spylon | spylon/spark/progress.py | https://github.com/Valassis-Digital-Media/spylon/blob/ac00e285fa1c790674606b793819c3e5baee0d48/spylon/spark/progress.py#L34-L59 | def _pretty_time_delta(td):
"""Creates a string representation of a time delta.
Parameters
----------
td : :class:`datetime.timedelta`
Returns
-------
pretty_formatted_datetime : str
"""
seconds = td.total_seconds()
sign_string = '-' if seconds < 0 else ''
seconds = abs(int... | [
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pretty_formatted_datetime : str | [
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arne-cl/discoursegraphs | src/discoursegraphs/readwrite/salt/layers.py | https://github.com/arne-cl/discoursegraphs/blob/842f0068a3190be2c75905754521b176b25a54fb/src/discoursegraphs/readwrite/salt/layers.py#L84-L105 | def to_etree(self):
"""
creates an etree element of a ``SaltLayer`` that mimicks a SaltXMI
<layers> element
"""
nodes_attrib_val = ' '.join('//@nodes.{}'.format(node_id)
for node_id in self.nodes)
edges_attrib_val = ' '.join('//@edges.{... | [
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SFDO-Tooling/CumulusCI | cumulusci/tasks/release_notes/generator.py | https://github.com/SFDO-Tooling/CumulusCI/blob/e19047921ca771a297e045f22f0bb201651bb6f7/cumulusci/tasks/release_notes/generator.py#L52-L59 | def render(self):
""" Returns the rendered release notes from all parsers as a string """
release_notes = []
for parser in self.parsers:
parser_content = parser.render()
if parser_content is not None:
release_notes.append(parser_content)
return u"\... | [
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F5Networks/f5-common-python | f5/bigip/tm/gtm/topology.py | https://github.com/F5Networks/f5-common-python/blob/7e67d5acd757a60e3d5f8c88c534bd72208f5494/f5/bigip/tm/gtm/topology.py#L149-L153 | def exists(self, **kwargs):
"""Providing a partition is not necessary on topology; causes errors"""
kwargs.pop('partition', None)
kwargs['transform_name'] = True
return self._exists(**kwargs) | [
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pycontribs/pyrax | pyrax/cloudmonitoring.py | https://github.com/pycontribs/pyrax/blob/9ddfd5064b3a292d7337906f3b2d5dce95b50b99/pyrax/cloudmonitoring.py#L82-L86 | def update(self, agent=None, metadata=None):
"""
Only the agent_id and metadata are able to be updated via the API.
"""
self.manager.update_entity(self, agent=agent, metadata=metadata) | [
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