OriC sequence
stringlengths 5
11.5k
| ori_id
stringlengths 12
12
| plasmid_id
stringlengths 9
11
| pfamid_fast
stringclasses 112
values | species
stringlengths 7
43
⌀ | cluster_id
stringlengths 12
27
| supercluster
int64 1
2.25k
| split
stringclasses 1
value | source
stringclasses 1
value | __index_level_0__
int64 24.6k
25.8k
|
|---|---|---|---|---|---|---|---|---|---|
TTTTTTATTATTCCTTTCATTCGATGACTAACCTAATATAGCGAACCTATCTATAAAAAACAACATATAAAACAATATTGTTTTATGTGTTGTTTTTTCACTTCATTTACTGTTTTTTCACTTCATTTACTGTTTTTTCACTTCATTTACTGTTTTTTCACTTCATTTACTGTTTTTTGCTCTCGTAAACTATTGATTTAATTAGGATAAAATCTCCATAAACAGGATTAAACAGGATTAAACAGGATTAAATAAAAACCCTTTAAAGAAACAGGAAGTTAAAAAAATTCTTTACGATTGCTTTAGTACTACATTCGAGTACTTTTTAGGCATAAAAAAAGCGATGTTATTAGCATCGCTTTAGTGATTAATTAGGTTGTTTCTTAAATATGATAAACAA | pORI00001195 | NZ_CP029793 | PF01051 | Psychrobacter | NZ_CP029793.1:4806-5206 | 1,138 | train | doric | 25,772 |
CGCCCGATCTGTCCTCTCCCGGTTGGCGTGTTCGACGTCGGTAGGCGGTTCTCGACCGTGTGGTTGTCGCCCCCGTGGGTAGCCCGTGGACGGGTACCGCTGCCGGGGTCCGCGGCGCCCTCGCAGTCTCGCAAGGGTGACCGACATAAAACCGTACCCCGCCCGCGCCGGAGGAACCTAGCCCGGCCCGTCGCCCGGGCGTGTGCCGTACGGAGGGCCCGCCGAGAGTTCGGCCGGAGTTCCACACCTCCGCTCCCTGCCCTGTGACGGCCTCCCTCGTCGGCCGAGCCGCCGCACCCGAGTTTCCACACAGCCTTTTTTCAAGAGAGATCTCCTAGAAGAAGAACCGAAGTAGTAGTAGGCGCTGTGGATTCTGTGGAATCGGCCCATCTGCGCAGGTCAGCAGGCGTGGTGTGGTGGGGATGGACATCGGGTGACCGGTGGATGAACGGGGGACGTCTGTGGAGACTCCGAAGTTGTCCCACATCCATCCACCGTTCGTCCTCGAGTTGTTCCACCGGATTCACCCACTTGTCCACCCGTGTGCACCGAACCGTGGAAAAGCGGTGGATTCCTCGAGGACTCCACACGAAGTCCTCGAGGAATCCACAGGCATGCACAGCGCTGTTGCCTGGTCAGTGCCTGTGGGTGAATCGGGGTGTGGAAGCTGTGGACAACCCCCTGTGCACGGTGCCGCGATCGTCCGGCGGCGAGCCTGTGTACGAATCGGTGGACAAACCGGTGGATTCCTCGAGGACTCCACAGGGATTCCTCGAGGAATCCACAAGGCGCAAAAAAGCACCGCCCCTGGTCAGGGGCGGTGCGAGGGTGTGGAGGACGC | pORI00001201 | NZ_LN868939 | None:None:None:None | Nocardia farcinica | pORI00001201 | 2,247 | train | doric | 25,774 |
TAAAAAAAATGTAATCTGAATTAATCACACTTCTTTCTTTATGTGCTTAAGTGCACAGGATTTTCTTTTTTATAAATTTCTCTATTTTGTCATTCTAAAACTTATTTTAAAGCTTTTCATAATTATTTTTTAAAAAAAAAAATTTTTTAAAAATTTTTTTTTTAAAAAATAATTAGATGCAAGTAGCTAAAAAAAATAAATG | pORI00001204 | NZ_LT667501 | PF02387 | Buchnera aphidicola | pORI00001204 | 1,807 | train | doric | 25,775 |