tokens
sequence
folded_tokens
sequence
tags
sequence
labels
sequence
[ "T-cell", "receptor", "beta", "(", "TCR", "beta", ")", "gene", "rearrangements", "occur", "in", "a", "third", "of", "early", "B-cell", "acute", "lymphoblastic", "leukemias", "(", "ALLs", ")", "." ]
[ "t-cell", "receptor", "beta", "(", "tcr", "beta", ")", "gene", "rearrangement", "occur", "in", "a", "third", "of", "early", "b-cell", "acute", "lymphoblastic", "leukemia", "(", "all", ")", "." ]
[ 7, 7, 7, 39, 7, 7, 39, 7, 35, 10, 20, 2, 8, 20, 8, 7, 8, 8, 35, 10, 35, 39, 15 ]
[ 0, 1, 1, 2, 0, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "The", "CANNTG", "motifs", "were", "found", "to", "bind", "MyoD", "and", "myogenin", "fusion", "proteins", "and", "to", "interact", "with", "proteins", "in", "nuclear", "extracts", "from", "cultured", "myotubes", "." ]
[ "the", "CANNTG", "motif", "be", "find", "to", "bind", "myod", "and", "myogenin", "fusion", "protein", "and", "to", "interact", "with", "protein", "in", "nuclear", "extract", "from", "culture", "myotube", "." ]
[ 2, 36, 35, 21, 28, 24, 22, 7, 30, 7, 7, 35, 30, 24, 22, 20, 35, 20, 8, 35, 20, 28, 35, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 0, 2, 0, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "We", "have", "cloned", "and", "sequenced", "COX12", ",", "the", "nuclear", "gene", "for", "subunit", "VIb", "of", "Saccharomyces", "cerevisiae", "cytochrome", "c", "oxidase", "." ]
[ "we", "have", "clone", "and", "sequence", "cox12", ",", "the", "nuclear", "gene", "for", "subunit", "vib", "of", "saccharomyces", "cerevisiae", "cytochrome", "c", "oxidase", "." ]
[ 18, 10, 28, 30, 28, 7, 16, 2, 8, 7, 20, 7, 7, 20, 11, 11, 7, 7, 7, 15 ]
[ 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 0, 1, 2, 0, 1, 1, 1, 1, 2 ]
[ "The", "structure", "of", "the", "calcineurin", "A", "gene", "was", "determined", "by", "comparison", "of", "the", "genomic", "and", "cDNA", "sequences", "." ]
[ "the", "structure", "of", "the", "calcineurin", "a", "gene", "be", "determine", "by", "comparison", "of", "the", "genomic", "and", "cdna", "sequence", "." ]
[ 2, 7, 20, 2, 7, 7, 7, 21, 28, 20, 7, 20, 2, 8, 30, 7, 35, 15 ]
[ 2, 2, 2, 2, 0, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "The", "basal", "promoter", "elements", "of", "murine", "cytochrome", "c", "oxidase", "subunit", "IV", "gene", "consist", "of", "tandemly", "duplicated", "ets", "motifs", "that", "bind", "to", "GABP", "related", "transcription", "factors", "." ]
[ "the", "basal", "promoter", "element", "of", "murine", "cytochrome", "c", "oxidase", "subunit", "iv", "gene", "consist", "of", "tandemly", "duplicated", "et", "motif", "that", "bind", "to", "gabp", "related", "transcription", "factor", "." ]
[ 2, 8, 7, 35, 20, 8, 7, 7, 7, 7, 39, 7, 10, 20, 26, 8, 7, 35, 33, 10, 24, 7, 8, 7, 35, 15 ]
[ 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 0, 2, 2, 2, 2, 0, 1, 1, 1, 2 ]
[ "Here", "we", "show", "that", "short", "synthetic", "peptides", "containing", "the", "pRB", "binding", "sequences", "of", "E1A", "are", "sufficient", "for", "interaction", "with", "p107", ",", "cyclin", "A", ",", "and", "p130", "." ]
[ "here", "we", "show", "that", "short", "synthetic", "peptide", "contain", "the", "prb", "binding", "sequence", "of", "e1a", "be", "sufficient", "for", "interaction", "with", "p107", ",", "cyclin", "a", ",", "and", "p130", "." ]
[ 26, 18, 10, 20, 8, 8, 35, 14, 2, 7, 7, 35, 20, 7, 10, 8, 20, 7, 20, 7, 16, 7, 7, 16, 30, 7, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 2, 0, 2, 2, 2, 2, 2, 0, 2, 0, 1, 2, 2, 0, 2 ]
[ "The", "minimal", "promoter", "of", "the", "RII", "beta", "gene", "was", "composed", "of", "two", "adjacent", "functional", "elements", "." ]
[ "the", "minimal", "promoter", "of", "the", "rius", "beta", "gene", "be", "compose", "of", "two", "adjacent", "functional", "element", "." ]
[ 2, 8, 7, 20, 2, 7, 7, 7, 21, 28, 20, 39, 8, 8, 35, 15 ]
[ 2, 2, 2, 2, 2, 0, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "Mapping", "the", "cAMP", "receptor", "protein", "contact", "site", "on", "the", "alpha", "subunit", "of", "Escherichia", "coli", "RNA", "polymerase", "." ]
[ "mapping", "the", "camp", "receptor", "protein", "contact", "site", "on", "the", "alpha", "subunit", "of", "escherichia", "coli", "rna", "polymerase", "." ]
[ 7, 2, 7, 7, 7, 7, 7, 20, 2, 7, 7, 20, 11, 11, 7, 7, 15 ]
[ 2, 2, 0, 1, 1, 1, 1, 2, 2, 2, 2, 2, 0, 1, 1, 1, 2 ]
[ "Here", "we", "show", "that", "epidermal", "growth", "factor", "or", "platelet", "derived", "growth", "factor", "stimulation", "of", "intact", "human", "or", "murine", "cells", "leads", "to", "phosphorylation", "of", "Nck", "protein", "on", "tyrosine", ",", "serine", ",", "and", "threonine", "residues", "." ]
[ "here", "we", "show", "that", "epidermal", "growth", "factor", "or", "platelet", "derive", "growth", "factor", "stimulation", "of", "intact", "human", "or", "murine", "cell", "lead", "to", "phosphorylation", "of", "nck", "protein", "on", "tyrosine", ",", "serine", ",", "and", "threonine", "residue", "." ]
[ 26, 18, 10, 20, 8, 7, 7, 30, 7, 28, 7, 7, 7, 20, 8, 8, 30, 8, 35, 9, 24, 7, 20, 7, 7, 20, 7, 16, 7, 16, 30, 7, 35, 15 ]
[ 2, 2, 2, 2, 0, 1, 1, 2, 0, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "A", "major", "mechanism", "whereby", "steroid", "hydroxylase", "gene", "transcription", "is", "regulated", "in", "the", "adrenal", "cortex", "requires", "the", "pituitary", "peptide", "hormone", ",", "ACTH", ",", "which", "acts", "via", "cAMP", "." ]
[ "a", "major", "mechanism", "whereby", "steroid", "hydroxylase", "gene", "transcription", "be", "regulate", "in", "the", "adrenal", "cortex", "require", "the", "pituitary", "peptide", "hormone", ",", "acth", ",", "which", "act", "via", "camp", "." ]
[ 2, 8, 7, 0, 7, 7, 7, 7, 9, 28, 20, 2, 8, 7, 9, 2, 8, 7, 7, 16, 7, 16, 33, 9, 20, 7, 15 ]
[ 2, 2, 2, 2, 0, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2 ]
[ "The", "-64", "/", "-37", "region", "interacted", "with", "purified", "Sp1", "and", "an", "unidentified", "protein", "(", "s", ")", ",", "proximal", "regulatory", "factor", "(", "s", ")", "I", "(", "PRF-I", ")", "." ]
[ "the", "-64", "/", "-37", "region", "interact", "with", "purify", "sp1", "and", "a", "unidentified", "protein", "(", "s", ")", ",", "proximal", "regulatory", "factor", "(", "s", ")", "I", "(", "prf-i", ")", "." ]
[ 2, 39, 40, 39, 7, 21, 20, 28, 7, 30, 2, 8, 7, 7, 35, 10, 16, 8, 8, 7, 7, 9, 39, 18, 10, 7, 7, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 1, 2, 0, 2, 2 ]
[ "Km", "and", "Vmax", "for", "two", "substrates", ",", "src", "related", "peptide", "and", "poly", "(", "Glu", ",", "Tyr", ")", "(", "4:1", ")", ",", "were", "2.4", "mM", "and", "2.5", "mumol", "min-1", "mg-1", "and", "0.26", "mM", "and", "1.2", "mumol", "min-1", "mg-1", ",", "respectively", "." ]
[ "km", "and", "vmax", "for", "two", "substrate", ",", "src", "related", "peptide", "and", "poly", "(", "Glu", ",", "Tyr", ")", "(", "4:1", ")", ",", "be", "2.4", "mm", "and", "2.5", "mumol", "min-1", "mg-1", "and", "0.26", "mm", "and", "1.2", "mumol", "min-1", "mg-1", ",", "respectively", "." ]
[ 7, 30, 7, 20, 39, 35, 16, 7, 8, 7, 30, 7, 39, 36, 16, 36, 39, 39, 39, 7, 16, 21, 39, 7, 30, 39, 7, 7, 7, 30, 39, 7, 30, 39, 7, 7, 7, 16, 26, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "This", "soluble", "form", "of", "the", "HGFr", "(", "sHGFr", ")", "bound", "HGF", "with", "an", "affinity", "similar", "to", "that", "of", "the", "authentic", ",", "membrane", "associated", "receptor", "." ]
[ "this", "soluble", "form", "of", "the", "hgfr", "(", "shgfr", ")", "bind", "hgf", "with", "a", "affinity", "similar", "to", "that", "of", "the", "authentic", ",", "membrane", "associate", "receptor", "." ]
[ 2, 8, 7, 20, 2, 7, 39, 7, 7, 21, 7, 20, 2, 7, 8, 24, 2, 20, 2, 8, 16, 7, 28, 7, 15 ]
[ 2, 2, 2, 2, 2, 0, 2, 0, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "Also", ",", "the", "human", "glycoprotein", "alpha-subunit", "promoter", "was", "induced", "10-fold", "by", "FSK", "in", "GH4", "rat", "pituitary", "cells", ".", "(", "ABSTRACT", "TRUNCATED", "AT", "400", "WORDS", ")" ]
[ "also", ",", "the", "human", "glycoprotein", "alpha-subunit", "promoter", "be", "induce", "10-fold", "by", "fsk", "in", "gh4", "rat", "pituitary", "cell", ".", "(", "abstract", "truncate", "at", "400", "word", ")" ]
[ 26, 16, 2, 8, 7, 7, 7, 21, 28, 26, 20, 7, 20, 7, 7, 8, 35, 15, 8, 7, 21, 20, 39, 35, 20 ]
[ 2, 2, 2, 0, 1, 1, 1, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "Structure", "and", "expression", "of", "a", "gene", "from", "Arabidopsis", "thaliana", "encoding", "a", "protein", "related", "to", "SNF1", "protein", "kinase", "." ]
[ "structure", "and", "expression", "of", "a", "gene", "from", "Arabidopsis", "thaliana", "encode", "a", "protein", "related", "to", "snf1", "protein", "kinase", "." ]
[ 7, 30, 7, 20, 2, 7, 20, 36, 7, 14, 2, 7, 8, 24, 7, 7, 7, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2 ]
[ "We", "have", "cloned", "and", "characterized", "a", "55-kb", "region", "of", "DNA", "surrounding", "HRAS1", "." ]
[ "we", "have", "clone", "and", "characterize", "a", "55-kb", "region", "of", "dna", "surrounding", "hras1", "." ]
[ 18, 10, 28, 30, 28, 2, 8, 7, 20, 7, 7, 7, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2 ]
[ "The", "ORF1", "protein", "was", "found", "to", "be", "highly", "homologous", "to", "the", "putative", "potexvirus", "RNA", "replicases", ";", "ORF2", ",", "-3", ",", "-5", "and", "-6", "proteins", "also", "have", "analogues", "among", "the", "potex-", "and", "/", "or", "carlavirus", "encoded", "proteins", "." ]
[ "the", "orf1", "protein", "be", "find", "to", "be", "highly", "homologous", "to", "the", "putative", "potexvirus", "rna", "replicase", ";", "orf2", ",", "-3", ",", "-5", "and", "-6", "protein", "also", "have", "analogue", "among", "the", "potex-_NN", "and", "/", "or", "carlavirus", "encode", "protein", "." ]
[ 2, 7, 7, 21, 28, 24, 22, 26, 8, 24, 2, 8, 7, 7, 35, 40, 7, 16, 39, 16, 39, 30, 39, 35, 26, 10, 35, 20, 2, 7, 30, 40, 30, 7, 21, 35, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "An", "RNA", "binding", "protein", "gene", "(", "rbp1", ")", "from", "Drosophila", "melanogaster", ",", "encoding", "an", "RNA", "recognition", "motif", "and", "an", "Arg-Ser", "rich", "(", "RS", ")", "domain", ",", "has", "been", "characterized", "." ]
[ "a", "rna", "binding", "protein", "gene", "(", "rbp1", ")", "from", "drosophila", "melanogaster", ",", "encode", "a", "rna", "recognition", "motif", "and", "a", "arg-ser", "rich", "(", "r", ")", "domain", ",", "have", "be", "characterize", "." ]
[ 2, 7, 7, 7, 7, 39, 7, 39, 20, 11, 11, 16, 14, 2, 7, 7, 7, 30, 2, 8, 8, 7, 7, 7, 7, 16, 9, 28, 28, 15 ]
[ 2, 0, 1, 1, 1, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "Characterization", "of", "the", "regulon", "controlled", "by", "the", "leucine", "responsive", "regulatory", "protein", "in", "Escherichia", "coli", "." ]
[ "characterization", "of", "the", "regulon", "control", "by", "the", "leucine", "responsive", "regulatory", "protein", "in", "escherichia", "coli", "." ]
[ 7, 20, 2, 7, 28, 20, 2, 7, 8, 8, 7, 20, 11, 11, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 2, 2, 2, 2 ]
[ "Mapping", "of", "the", "mouse", "ornithine", "decarboxylase", "related", "sequence", "family", "." ]
[ "mapping", "of", "the", "mouse", "ornithine", "decarboxylase", "related", "sequence", "family", "." ]
[ 7, 20, 2, 7, 7, 7, 8, 7, 7, 15 ]
[ 2, 2, 2, 0, 1, 1, 1, 1, 1, 2 ]
[ "This", "mutation", "also", "results", "in", "markedly", "decreased", "levels", "of", "CAD", "mRNA", "and", "protein", "in", "the", "mutant", "." ]
[ "this", "mutation", "also", "result", "in", "markedly", "decrease", "level", "of", "cad", "mrna", "and", "protein", "in", "the", "mutant", "." ]
[ 2, 7, 26, 9, 20, 26, 28, 35, 20, 7, 7, 30, 7, 20, 2, 7, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 2, 2, 2, 2, 2, 2 ]
[ "Mutational", "studies", "revealed", "that", "it", "was", "the", "homeodomain", "binding", "site", "II", "sequence", "that", "was", "required", "for", "this", "regulation", "." ]
[ "mutational", "study", "reveal", "that", "it", "be", "the", "homeodomain", "binding", "site", "ii", "sequence", "that", "be", "require", "for", "this", "regulation", "." ]
[ 8, 35, 21, 20, 18, 21, 2, 7, 7, 7, 39, 7, 33, 21, 28, 20, 2, 7, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2 ]
[ "Thus", ",", "the", "pol", "alpha-primase", "complex", "appears", "to", "act", "processively", "for", "only", "a", "short", "distance", "." ]
[ "thus", ",", "the", "pol", "alpha-primase", "complex", "appear", "to", "act", "processively", "for", "only", "a", "short", "distance", "." ]
[ 26, 16, 2, 7, 7, 7, 9, 24, 22, 26, 20, 26, 2, 8, 7, 15 ]
[ 2, 2, 2, 0, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "Interestingly", ",", "the", "positions", "of", "these", "introns", "have", "been", "conserved", "in", "comparison", "with", "the", "genes", "of", "two", "other", "transglutaminase", "like", "activities", "described", "in", "the", "literature", ",", "but", "the", "TGM1", "gene", "is", "by", "far", "the", "smallest", "characterized", "to", "date", "because", "its", "introns", "are", "relatively", "smaller", "." ]
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[ "In", "a", "retrospective", "analysis", "of", "data", "from", "35", "cases", "with", "malignant", "lymphoma", "from", "a", "cohort", "of", "2017", "HIV", "infected", "patients", ",", "the", "stage", "of", "HIV-disease", ",", "the", "CD4", "counts", "at", "the", "time", "of", "diagnosis", ",", "and", "the", "use", "of", "antineoplastic", "agents", "or", "radiotherapy", "were", "correlated", "with", "outcome", "." ]
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[ 20, 2, 8, 7, 20, 35, 20, 39, 35, 20, 8, 7, 20, 2, 7, 20, 39, 7, 8, 35, 16, 2, 7, 20, 7, 16, 2, 7, 9, 20, 2, 7, 20, 7, 16, 30, 2, 7, 20, 8, 35, 30, 7, 21, 28, 20, 7, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "cDNA", "clones", "encoding", "Arabidopsis", "thaliana", "and", "Zea", "mays", "mitochondrial", "chaperonin", "HSP60", "and", "gene", "expression", "during", "seed", "germination", "and", "heat", "shock", "." ]
[ "cdna", "clone", "encode", "Arabidopsis", "thaliana", "and", "Zea", "may", "mitochondrial", "chaperonin", "hsp60", "and", "gene", "expression", "during", "seed", "germination", "and", "heat", "shock", "." ]
[ 7, 35, 14, 36, 7, 30, 36, 35, 8, 7, 7, 30, 7, 7, 20, 7, 7, 30, 7, 7, 15 ]
[ 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "Amino", "acid", "sequence", "comparison", "revealed", "significant", "homology", "between", "the", "yeast", "and", "Escherichia", "coli", "gamma-glutamyl", "kinases", "throughout", "their", "lengths", "." ]
[ "amino", "acid", "sequence", "comparison", "reveal", "significant", "homology", "between", "the", "yeast", "and", "escherichia", "coli", "gamma-glutamyl", "kinase", "throughout", "they", "length", "." ]
[ 7, 7, 7, 7, 21, 8, 7, 20, 2, 7, 30, 11, 11, 7, 35, 20, 17, 35, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 2, 2, 2, 2 ]
[ "Interaction", "of", "H-2Eb", "with", "an", "IAP", "retrotransposon", "in", "the", "A20", "/", "2J", "B", "cell", "lymphoma", "." ]
[ "interaction", "of", "h-2eb", "with", "a", "iap", "retrotransposon", "in", "the", "a20", "/", "2j", "b", "cell", "lymphoma", "." ]
[ 7, 20, 7, 20, 2, 7, 7, 20, 2, 7, 40, 7, 7, 7, 7, 15 ]
[ 2, 2, 0, 2, 2, 0, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
[ "With", "the", "exception", "of", "mutants", "that", "remove", "the", "membrane", "anchor", "domain", ",", "all", "of", "the", "mutant", "glycoproteins", "retained", "the", "ability", "to", "cause", "fusion", "of", "CD4", "bearing", "cells", "." ]
[ "with", "the", "exception", "of", "mutant", "that", "remove", "the", "membrane", "anchor", "domain", ",", "all", "of", "the", "mutant", "glycoprotein", "retain", "the", "ability", "to", "cause", "fusion", "of", "cd4", "bearing", "cell", "." ]
[ 20, 2, 7, 20, 35, 33, 10, 2, 7, 7, 7, 16, 2, 20, 2, 8, 35, 21, 2, 7, 24, 22, 7, 20, 7, 7, 35, 15 ]
[ 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2 ]
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