code stringlengths 26 79.6k | docstring stringlengths 1 46.9k |
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def time_in_range(self):
curr = datetime.datetime.now().time()
if self.start_time <= self.end_time:
return self.start_time <= curr <= self.end_time
else:
return self.start_time <= curr or curr <= self.end_time | Return true if current time is in the active range |
def load_config():
filename =
keyring_cfg = os.path.join(platform.config_root(), filename)
if not os.path.exists(keyring_cfg):
return
config = configparser.RawConfigParser()
config.read(keyring_cfg)
_load_keyring_path(config)
try:
if config.has_section("backen... | Load a keyring using the config file in the config root. |
def sayHello(self, name="Not given", message="nothing"):
print(
"Python.sayHello called by: {0} "
"with message: ".format(name, message)
)
return (
"PythonSync says: Howdy {0} "
"that's a nice runtime you got there".format(name)
) | Synchronous implementation of IHello.sayHello synchronous method.
The remote calling thread will be blocked until this is executed and
responds. |
def set_connection(host=None, database=None, user=None, password=None):
c.CONNECTION[] = host
c.CONNECTION[] = database
c.CONNECTION[] = user
c.CONNECTION[] = password | Set connection parameters. Call set_connection with no arguments to clear. |
def __build_author_name_expr(author_name, author_email_address):
assert author_name or author_email_address,
author_name_expr = author_name or author_email_address[:author_email_address.find()]
if in author_name_expr:
author_name_expr = % author_name_expr
if author... | Build the name of the author of a message as described in the Internet
Message Format specification: https://tools.ietf.org/html/rfc5322#section-3.6.2
@param author_name: complete name of the originator of the message.
@param author_email_address: address of the mailbox to which the author
of the... |
def zip_entry_rollup(zipfile):
files = dirs = 0
total_c = total_u = 0
for i in zipfile.infolist():
if i.filename[-1] == :
dirs += 1
else:
files += 1
total_c += i.compress_size
total_u += i.file_size
return files, dirs, ... | returns a tuple of (files, dirs, size_uncompressed,
size_compressed). files+dirs will equal len(zipfile.infolist) |
def _get_reference(self):
super()._get_reference()
self.cubeA_body_id = self.sim.model.body_name2id("cubeA")
self.cubeB_body_id = self.sim.model.body_name2id("cubeB")
self.l_finger_geom_ids = [
self.sim.model.geom_name2id(x) for x in self.gripper.left_finger_geoms
... | Sets up references to important components. A reference is typically an
index or a list of indices that point to the corresponding elements
in a flatten array, which is how MuJoCo stores physical simulation data. |
def create_app(config=, override=None,
init_logging=init_logging):
app = UDataApp(APP_NAME)
app.config.from_object(config)
settings = os.environ.get(, join(os.getcwd(), ))
if exists(settings):
app.settings_file = settings
app.config.from_pyfile(settings)
if ov... | Factory for a minimal application |
def validate_data(self):
warnings = {}
spec_warnings, samp_warnings, site_warnings, loc_warnings = {}, {}, {}, {}
if self.specimens:
spec_warnings = self.validate_items(self.specimens, )
if self.samples:
samp_warnings = self.validate_items(self.samples, )... | Validate specimen, sample, site, and location data. |
def get_locations():
arequest = requests.get(LOCATIONS_URL, headers=HEADERS)
status_code = str(arequest.status_code)
if status_code == :
_LOGGER.error("Token expired.")
return False
return arequest.json() | Pull the accounts locations. |
def guess_labels(self, doc):
if doc.nb_pages <= 0:
return set()
self.label_guesser.total_nb_documents = len(self._docs_by_id.keys())
label_names = self.label_guesser.guess(doc)
labels = set()
for label_name in label_names:
label = self.labels[labe... | return a prediction of label names |
def _at_extend(self, calculator, rule, scope, block):
from scss.selector import Selector
selectors = calculator.apply_vars(block.argument)
rule.extends_selectors.extend(Selector.parse_many(selectors)) | Implements @extend |
def wrap(x):
if isinstance(x, G1Element):
return _wrap(x, serializeG1)
elif isinstance(x, G2Element):
return _wrap(x, serializeG2)
elif isinstance(x, GtElement):
return _wrap(x, serializeGt)
elif isinstance(x, str):
return x
elif isinstance(x, (i... | Wraps an element or integer type by serializing it and base64 encoding
the resulting bytes. |
def set_event_data(self, data, read_attrs):
if self.handle.mode == :
raise Exception()
read_number = read_attrs[]
read_group = .format(self.group_name, read_number)
read_info = self.handle.status.read_info
read_number_map = self.handle.status.read_number_map
... | Set event data with the specied attributes.
:param data: Event data table.
:param read_attrs: Attributes to put on the read group. This must include
the read_number, which must refer to a read present in the object. The
attributes should not include the standard read att... |
def _construct_w(self, inputs):
depthwise_weight_shape = self._kernel_shape + (self._input_channels,
self._channel_multiplier)
pointwise_input_size = self._channel_multiplier * self._input_channels
pointwise_weight_shape = (1, 1, pointwise_input_size, ... | Connects the module into the graph, with input Tensor `inputs`.
Args:
inputs: A 4D Tensor of shape:
[batch_size, input_height, input_width, input_channels]
and of type `tf.float16`, `tf.bfloat16` or `tf.float32`.
Returns:
A tuple of two 4D Tensors, each with the same dtype as `... |
def _parse_geometry(geometry):
if isinstance(geometry, str):
geometry = shapely.wkt.loads(geometry)
elif isinstance(geometry, dict):
geometry = shapely.geometry.shape(geometry)
elif not isinstance(geometry, shapely.geometry.base.BaseGeometry):
raise T... | Parses given geometry into shapely object
:param geometry:
:return: Shapely polygon or multipolygon
:rtype: shapely.geometry.Polygon or shapely.geometry.MultiPolygon
:raises TypeError |
def _add_arg_python(self, key, value=None, mask=False):
self._data[key] = value
if not value:
pass
elif value is True:
self._args.append(.format(key))
self._args_quoted.append(.format(key))
self._args_masked.appen... | Add CLI Arg formatted specifically for Python.
Args:
key (string): The CLI Args key (e.g., --name).
value (string): The CLI Args value (e.g., bob).
mask (boolean, default:False): Indicates whether no mask value. |
def _create_page_control(self):
if self.custom_page_control:
control = self.custom_page_control()
elif self.kind == :
control = QtGui.QPlainTextEdit()
elif self.kind == :
control = QtGui.QTextEdit()
control.installEventFilter(self)
vie... | Creates and connects the underlying paging widget. |
def limit(self, limit_value, key_func=None, per_method=False,
methods=None, error_message=None, exempt_when=None):
return self.__limit_decorator(limit_value, key_func, per_method=per_method,
methods=methods, error_message=error_message,
... | decorator to be used for rate limiting individual routes.
:param limit_value: rate limit string or a callable that returns a string.
:ref:`ratelimit-string` for more details.
:param function key_func: function/lambda to extract the unique identifier for
the rate limit. defaults to rem... |
def ruamel_structure(data, validator=None):
if isinstance(data, dict):
if len(data) == 0:
raise exceptions.CannotBuildDocumentsFromEmptyDictOrList(
"Document must be built with non-empty dicts and lists"
)
return CommentedMap(
[
... | Take dicts and lists and return a ruamel.yaml style
structure of CommentedMaps, CommentedSeqs and
data.
If a validator is presented and the type is unknown,
it is checked against the validator to see if it will
turn it back in to YAML. |
def _copy_selection(self, *event):
if react_to_event(self.view, self.view.editor, event):
logger.debug("copy selection")
global_clipboard.copy(self.model.selection)
return True | Copies the current selection to the clipboard. |
def getquals(args):
p = OptionParser(getquals.__doc__)
p.add_option("--types", default="gene,mRNA,CDS",
type="str", dest="quals_ftypes",
help="Feature types from which to extract qualifiers")
p.add_option("--ignore", default="locus_tag,product,codon_start,translation",
... | %prog getquals [--options] gbkfile > qualsfile
Read GenBank file and extract all qualifiers per feature type
into a tab-delimited file |
def SetPlatformArchContext():
_CONFIG.AddContext("Platform:%s" % platform.system().title())
machine = platform.uname()[4]
if machine in ["x86_64", "AMD64", "i686"]:
if platform.architecture()[0] == "32bit":
arch = "i386"
else:
arch = "amd64"
elif machine == "x86":
arch = "i3... | Add the running contexts to the config system. |
def logBranch(self, indent=0, level=logging.DEBUG):
if 0:
print(indent * " " + str(self))
else:
logger.log(level, indent * " " + str(self))
for childItems in self.childItems:
childItems.logBranch(indent + 1, level=level) | Logs the item and all descendants, one line per child |
def rev_comp(seq):
rev_seq = seq[::-1]
rev_comp_seq = .join([base_pairing[s] for s in rev_seq])
return rev_comp_seq | Get reverse complement of sequence.
rev_comp will maintain the case of the sequence.
Parameters
----------
seq : str
nucleotide sequence. valid {a, c, t, g, n}
Returns
-------
rev_comp_seq : str
reverse complement of sequence |
def local_open(url):
scheme, server, path, param, query, frag = urllib.parse.urlparse(url)
filename = urllib.request.url2pathname(path)
if os.path.isfile(filename):
return urllib.request.urlopen(url)
elif path.endswith() and os.path.isdir(filename):
files = []
for f in os.li... | Read a local path, with special support for directories |
def cmd_tcpscan(ip, port, iface, flags, sleeptime, timeout, show_all, verbose):
if verbose:
logging.basicConfig(level=logging.INFO, format=)
conf.verb = False
if iface:
conf.iface = iface
port_regex = r
if not re.match(port_regex, port):
logging.critical("Invalid po... | TCP Port Scanner.
Print the ports that generated a response with the SYN flag or (if show use -a) all the
ports that generated a response.
It's really basic compared with nmap, but who is comparing?
Example:
\b
# habu.tcpscan -p 22,23,80,443 -s 1 45.77.113.133
22 S -> SA
80 S -> SA
... |
def options(argv=[]):
parser = HendrixOptionParser
parsed_args = parser.parse_args(argv)
return vars(parsed_args[0]) | A helper function that returns a dictionary of the default key-values pairs |
def ber_code(self):
try:
alt_text = self._ad_page_content.find(
, {: }
).find()[]
if ( in alt_text):
return
else:
alt_arr = alt_text.split()
if in alt_arr[0].lower():
r... | This method gets ber code listed in Daft.
:return: |
def is_img_id_valid(img_id):
t = re.sub(r, , img_id, re.IGNORECASE)
t = re.sub(r, , t)
if img_id != t or img_id.count() != 1:
return False
profile, base_name = img_id.split(, 1)
if not profile or not base_name:
return False
try:
get_profile_configs(profile)
excep... | Checks if img_id is valid. |
def mean_by_panel(self, length):
self._check_panel(length)
func = lambda v: v.reshape(-1, length).mean(axis=0)
newindex = arange(length)
return self.map(func, index=newindex) | Compute the mean across fixed sized panels of each record.
Splits each record into panels of size `length`,
and then computes the mean across panels.
Panel length must subdivide record exactly.
Parameters
----------
length : int
Fixed length with which to su... |
def check_str(obj):
if isinstance(obj, str):
return obj
if isinstance(obj, float):
return str(int(obj))
else:
return str(obj) | Returns a string for various input types |
def _parse_wsgi_headers(wsgi_environ):
prefix =
p_len = len(prefix)
headers = {
key[p_len:].replace(, ).lower():
val for (key, val) in wsgi_environ.items()
if key.startswith(prefix)}
return headers | HTTP headers are presented in WSGI environment with 'HTTP_' prefix.
This method finds those headers, removes the prefix, converts
underscores to dashes, and converts to lower case.
:param wsgi_environ:
:return: returns a dictionary of headers |
def consume_changes(self, start, end):
left, right = self._get_changed(start, end)
if left < right:
del self.lines[left:right]
return left < right | Clear the changed status of lines from start till end |
async def deregister(self, check):
check_id = extract_attr(check, keys=["CheckID", "ID"])
response = await self._api.get("/v1/agent/check/deregister", check_id)
return response.status == 200 | Deregisters a local check
Parameters:
check (ObjectID): Check ID
Returns:
bool: ``True`` on success
The agent will take care of deregistering the check from the Catalog. |
def set(ctx, key, value):
if key == "default_account" and value[0] == "@":
value = value[1:]
ctx.bitshares.config[key] = value | Set configuration parameters |
def price_change(self):
try:
if self._data_from_search:
return self._data_from_search.find(, {: }).text
else:
return self._ad_page_content.find(, {: }).text
except Exception as e:
if self._debug:
logging.error(
... | This method returns any price change.
:return: |
def fromJSON(value):
j = json.loads(value)
v = GPString()
if "defaultValue" in j:
v.value = j[]
else:
v.value = j[]
if in j:
v.paramName = j[]
elif in j:
v.paramName = j[]
return v | loads the GP object from a JSON string |
def delete_image(self, identifier):
if isinstance(identifier, dict):
identifier = identifier.get(, )
j, r = self.request(, + str(identifier))
r.raise_for_status()
return j | ::
DELETE /:login/images/:id
:param identifier: match on the listed image identifier
:type identifier: :py:class:`basestring` or :py:class:`dict`
A string or a dictionary containing an ``id`` key may be
passed in. Will raise an error if the response... |
def remove_entry(self, entry):
if not isinstance(entry, Entry):
raise TypeError("entry param must be of type Entry.")
if not entry in self.entries:
raise ValueError("Entry doesn't exist / not bound to this datbase.")
entry.group.entries.remove(entry)
... | Remove specified entry.
:param entry: The Entry object to remove.
:type entry: :class:`keepassdb.model.Entry` |
def addText(self, text):
self.moveCursor(QtGui.QTextCursor.End)
self.setTextColor(self._currentColor)
self.textCursor().insertText(text) | append text in the chosen color |
def robot_files(self):
result = []
for name in os.listdir(self.path):
fullpath = os.path.join(self.path, name)
if os.path.isdir(fullpath):
result.append(RobotFactory(fullpath, parent=self))
else:
if ((name.endswith(".txt") or n... | Return a list of all folders, and test suite files (.txt, .robot) |
def load_preferences(session, config, valid_paths,
cull_disabled=False, openid=None,
cull_backends=None):
cull_backends = cull_backends or []
query = session.query(fmn.lib.models.Preference)
if openid:
query = query.filter(fmn.lib.models.Preference.o... | Every rule for every filter for every context for every user.
Any preferences in the DB that are for contexts that are disabled in the
config are omitted here.
If the `openid` argument is None, then this is an expensive query that
loads, practically, the whole database. However, if an openid string i... |
def GetRowHeaders(self) -> list:
eleArray = self.pattern.GetCurrentRowHeaders()
if eleArray:
controls = []
for i in range(eleArray.Length):
ele = eleArray.GetElement(i)
con = Control.CreateControlFromElement(element=ele)
if... | Call IUIAutomationTablePattern::GetCurrentRowHeaders.
Return list, a list of `Control` subclasses, representing all the row headers in a table.
Refer https://docs.microsoft.com/en-us/windows/desktop/api/uiautomationclient/nf-uiautomationclient-iuiautomationtablepattern-getcurrentrowheaders |
def get_instance(self, payload):
return MonthlyInstance(self._version, payload, account_sid=self._solution[], ) | Build an instance of MonthlyInstance
:param dict payload: Payload response from the API
:returns: twilio.rest.api.v2010.account.usage.record.monthly.MonthlyInstance
:rtype: twilio.rest.api.v2010.account.usage.record.monthly.MonthlyInstance |
def delete_collection_pod_security_policy(self, **kwargs):
kwargs[] = True
if kwargs.get():
return self.delete_collection_pod_security_policy_with_http_info(**kwargs)
else:
(data) = self.delete_collection_pod_security_policy_with_http_info(**kwargs)
r... | delete collection of PodSecurityPolicy
This method makes a synchronous HTTP request by default. To make an
asynchronous HTTP request, please pass async_req=True
>>> thread = api.delete_collection_pod_security_policy(async_req=True)
>>> result = thread.get()
:param async_req bool... |
def contains_entry(self, key, value):
check_not_none(key, "key cant be None")
key_data = self._to_data(key)
value_data = self._to_data(value)
return self._encode_invoke_on_key(multi_map_contains_entry_codec, key_data, key=key_data,
value... | Returns whether the multimap contains an entry with the value.
:param key: (object), the specified key.
:param value: (object), the specified value.
:return: (bool), ``true`` if this multimap contains the key-value tuple. |
def parse_and_normalize_url_date(date_str):
if date_str is None:
return None
try:
return d1_common.date_time.dt_from_iso8601_str(date_str)
except d1_common.date_time.iso8601.ParseError as e:
raise d1_common.types.exceptions.InvalidRequest(
0,
.format(
... | Parse a ISO 8601 date-time with optional timezone.
- Return as datetime with timezone adjusted to UTC.
- Return naive date-time set to UTC. |
def create_layout(self, size = None):
if not self.context:
raise Exception("Can not create layout without existing context!")
layout = pangocairo.create_layout(self.context)
font_desc = pango.FontDescription(_font_desc)
if size: font_desc.s... | utility function to create layout with the default font. Size and
alignment parameters are shortcuts to according functions of the
pango.Layout |
def merge_code(left_code, right_code):
data = dict()
code_lines = (left_code and left_code.iter_code_by_lines()) or tuple()
for abs_line, rel_line, dis in code_lines:
data[rel_line] = [(abs_line, dis), None]
code_lines = (right_code and right_code.iter_code_by_lines()) or tuple()
for... | { relative_line:
((left_abs_line, ((offset, op, args), ...)),
(right_abs_line, ((offset, op, args), ...))),
... } |
def light_to_gl(light, transform, lightN):
gl_color = vector_to_gl(light.color.astype(np.float64) / 255.0)
assert len(gl_color) == 4
gl_position = vector_to_gl(transform[:3, 3])
args = [(lightN, gl.GL_POSITION, gl_position),
(lightN, gl.GL_SPECULAR, gl_color),
... | Convert trimesh.scene.lighting.Light objects into
args for gl.glLightFv calls
Parameters
--------------
light : trimesh.scene.lighting.Light
Light object to be converted to GL
transform : (4, 4) float
Transformation matrix of light
lightN : int
Result of gl.GL_LIGHT0, gl.GL_LI... |
async def pause(self, pause: bool = True):
self._paused = pause
await self.node.pause(self.channel.guild.id, pause) | Pauses the current song.
Parameters
----------
pause : bool
Set to ``False`` to resume. |
def _rotate_tr(self):
rot, x, y, z = self._quaternion.get_axis_angle()
up, forward, right = self._get_dim_vectors()
self.transform.rotate(180 * rot / np.pi, (x, z, y)) | Rotate the transformation matrix based on camera parameters |
def _cbc_decrypt(self, final_key, crypted_content):
aes = AES.new(final_key, AES.MODE_CBC, self._enc_iv)
decrypted_content = aes.decrypt(crypted_content)
padding = decrypted_content[-1]
if sys.version > :
padding = decrypted_content[-1]
else:
... | This method decrypts the database |
def add_sent(self, sent_obj):
if sent_obj is None:
raise Exception("Sentence object cannot be None")
elif sent_obj.ID is None:
sent_obj.ID = next(self.__idgen)
elif self.has_id(sent_obj.ID):
raise Exception("Sentence ID {} exists".format(... | Add a ttl.Sentence object to this document |
def save(self, set_cookie, **params):
if set(self.store.items()) ^ set(self.items()):
value = dict(self.items())
value = json.dumps(value)
value = self.encrypt(value)
if not isinstance(value, str):
value = value.encode(self.encoding)
... | Update cookies if the session has been changed. |
async def teardown_client(self, client_id):
client_info = self._client_info(client_id)
self.adapter.remove_monitor(client_info[])
conns = client_info[]
for conn_string, conn_id in conns.items():
try:
self._logger.debug("Disconnecting client %s from... | Release all resources held by a client.
This method must be called and awaited whenever a client is
disconnected. It ensures that all of the client's resources are
properly released and any devices they have connected to are
disconnected cleanly.
Args:
client_id (s... |
def set_data_length(self, length):
if not self._initialized:
raise pycdlibexception.PyCdlibInternalError()
len_diff = length - self.info_len
if len_diff > 0:
new_len = self.alloc_descs[-1][0] + len_diff
if new_len >... | A method to set the length of the data that this UDF File Entry
points to.
Parameters:
length - The new length for the data.
Returns:
Nothing. |
def rsi(self, n, array=False):
result = talib.RSI(self.close, n)
if array:
return result
return result[-1] | RSI指标 |
def cidr_notation(ip_address, netmask):
try:
inet_aton(ip_address)
except:
raise Exception("Invalid ip address " % ip_address)
try:
inet_aton(netmask)
except:
raise Exception("Invalid netmask " % netmask)
ip_address_split = ip_address.split()
netmask_split =... | Retrieve the cidr notation given an ip address and netmask.
For example:
cidr_notation('12.34.56.78', '255.255.255.248')
Would return: 12.34.56.72/29
@see http://terminalmage.net/2012/06/10/how-to-find-out-the-cidr-notation-for-a-subne-given-an-ip-and-netmask/
@see http://ww... |
def subscribe_topics(self):
base = self.topic
subscribe = self.mqtt.subscribe
subscribe(b"/".join((base, b"$stats/interval/set")))
subscribe(b"/".join((self.settings.MQTT_BASE_TOPIC, b"$broadcast/
nodes = self.nodes
for node in nodes:
... | subscribe to all registered device and node topics |
def stop(cls, app_id):
conn = Qubole.agent()
return conn.put(cls.element_path(app_id) + "/stop") | Stops an app by issuing a PUT request to the /apps/ID/stop endpoint. |
def playlist_create(
self,
name,
description=,
*,
make_public=False,
songs=None
):
share_state = if make_public else
playlist = self._call(
mc_calls.PlaylistsCreate,
name,
description,
share_state
).body
if songs:
playlist = self.playlist_songs_add(songs, playlist)
return ... | Create a playlist.
Parameters:
name (str): Name to give the playlist.
description (str): Description to give the playlist.
make_public (bool, Optional): If ``True`` and account has a subscription,
make playlist public.
Default: ``False``
songs (list, Optional): A list of song dicts to add to the ... |
def loadfn(fn, *args, **kwargs):
if "mpk" in os.path.basename(fn).lower():
if msgpack is None:
raise RuntimeError(
"Loading of message pack files is not "
"possible as msgpack-python is not installed.")
if "object_hook" not in kwargs:
kwar... | Loads json/yaml/msgpack directly from a filename instead of a
File-like object. For YAML, ruamel.yaml must be installed. The file type is
automatically detected. YAML is assumed if the filename contains "yaml"
(lower or upper case). Otherwise, json is always assumed.
Args:
fn (str/Path): filena... |
def Update(self, env, args=None):
values = {}
for option in self.options:
if not option.default is None:
values[option.key] = option.default
for filename in self.files:
if os.path.exists(filename):
dir = os.pat... | Update an environment with the option variables.
env - the environment to update. |
def Sonnad_Goudar_2006(Re, eD):
r
S = 0.124*eD*Re + log(0.4587*Re)
return (.8686*log(.4587*Re/S**(S/(S+1))))**-2 | r'''Calculates Darcy friction factor using the method in Sonnad and Goudar
(2006) [2]_ as shown in [1]_.
.. math::
\frac{1}{\sqrt{f_d}} = 0.8686\ln\left(\frac{0.4587Re}{S^{S/(S+1)}}\right)
.. math::
S = 0.1240\times\frac{\epsilon}{D}\times Re + \ln(0.4587Re)
Parameters
----------
... |
def build_image_from_inherited_image(self, image_name: str, image_tag: str,
repo_path: Path,
requirements_option: RequirementsOptions):
base_name, base_tag = self.get_inherit_image()
if requirements_option == Re... | Builds a image with installed requirements from the inherited image. (Or just tags the image
if there are no requirements.)
See :meth:`build_image` for parameters descriptions.
:rtype: docker.models.images.Image |
def save_aggregate_report_to_elasticsearch(aggregate_report,
index_suffix=None,
monthly_indexes=False):
logger.debug("Saving aggregate report to Elasticsearch")
aggregate_report = aggregate_report.copy()
metadata = ag... | Saves a parsed DMARC aggregate report to ElasticSearch
Args:
aggregate_report (OrderedDict): A parsed forensic report
index_suffix (str): The suffix of the name of the index to save to
monthly_indexes (bool): Use monthly indexes instead of daily indexes
Raises:
AlreadySaved |
def dictlist_convert_to_bool(dict_list: Iterable[Dict], key: str) -> None:
for d in dict_list:
d[key] = 1 if d[key] == "Y" else 0 | Process an iterable of dictionaries. For each dictionary ``d``, convert
(in place) ``d[key]`` to a bool. If that fails, convert it to ``None``. |
def _get_new_connection(self, conn_params):
self.__connection_string = conn_params.get(, )
conn = self.Database.connect(**conn_params)
return conn | Opens a connection to the database. |
def load(self):
pg = self.usr.getPage("http://www.neopets.com/bank.phtml")
if not "great to see you again" in pg.content:
logging.getLogger("neolib.user").info("Could not load userpg': pg})
raise noBankAcct
self.__loadDetails(pg) | Loads the user's account details and
Raises
parseException |
def get_arctic_version(self, symbol, as_of=None):
return self._read_metadata(symbol, as_of=as_of).get(, 0) | Return the numerical representation of the arctic version used to write the last (or as_of) version for
the given symbol.
Parameters
----------
symbol : `str`
symbol name for the item
as_of : `str` or int or `datetime.datetime`
Return the data as it was a... |
def space_cluster(catalog, d_thresh, show=True):
dist_mat = dist_mat_km(catalog)
dist_vec = squareform(dist_mat)
Z = linkage(dist_vec, method=)
indices = fcluster(Z, t=d_thresh, criterion=)
group_ids = list(set(indices))
indices = [(indices[i], i) for i in range(len(indices))]
... | Cluster a catalog by distance only.
Will compute the matrix of physical distances between events and utilize
the :mod:`scipy.clustering.hierarchy` module to perform the clustering.
:type catalog: obspy.core.event.Catalog
:param catalog: Catalog of events to clustered
:type d_thresh: float
:par... |
def is_valid_number_for_region(numobj, region_code):
country_code = numobj.country_code
if region_code is None:
return False
metadata = PhoneMetadata.metadata_for_region_or_calling_code(country_code, region_code.upper())
if (metadata is None or
(region_code != REGION_CODE_FOR_NON_GE... | Tests whether a phone number is valid for a certain region.
Note this doesn't verify the number is actually in use, which is
impossible to tell by just looking at a number itself. If the country
calling code is not the same as the country calling code for the region,
this immediately exits with false. ... |
def result(self):
if self._result.lower() == :
return WIN
if self._result.lower() == and \
self.overtime != 0:
return OVERTIME_LOSS
return LOSS | Returns a ``string`` constant to indicate whether the team lost in
regulation, lost in overtime, or won. |
def _trunc(x, minval=None, maxval=None):
x = np.copy(x)
if minval is not None:
x[x < minval] = minval
if maxval is not None:
x[x > maxval] = maxval
return x | Truncate vector values to have values on range [minval, maxval] |
def _get_task_with_policy(queue_name, task_id, owner):
now = datetime.datetime.utcnow()
task = (
WorkQueue.query
.filter_by(queue_name=queue_name, task_id=task_id)
.with_lockmode()
.first())
if not task:
raise TaskDoesNotExistError( % task_id)
lease_del... | Fetches the specified task and enforces ownership policy.
Args:
queue_name: Name of the queue the work item is on.
task_id: ID of the task that is finished.
owner: Who or what has the current lease on the task.
Returns:
The valid WorkQueue task that is currently owned.
Rai... |
def register_entity_to_group(self, entity, group):
if entity in self._entities:
if group in self._groups:
self._groups[group].append(entity)
else:
self._groups[group] = [entity]
else:
raise UnmanagedEntityError(entity) | Add entity to a group.
If group does not exist, entity will be added as first member
entity is of type Entity
group is a string that is the name of the group |
def get_gaf_format(self):
sep =
return sep.join(
[self.gene, self.db_ref, self.term.id, self.evidence,
.join(self.db_ref), .join(self.with_)]) | Return a GAF 2.0-compatible string representation of the annotation.
Parameters
----------
Returns
-------
str
The formatted string. |
def _translate_segment_glob(pattern):
escape = False
regex =
i, end = 0, len(pattern)
while i < end:
char = pattern[i]
i += 1
if escape:
escape = False
regex += re.escape(char)
elif char == :
escape = True
elif char == :
regex +=
elif cha... | Translates the glob pattern to a regular expression. This is used in
the constructor to translate a path segment glob pattern to its
corresponding regular expression.
*pattern* (:class:`str`) is the glob pattern.
Returns the regular expression (:class:`str`). |
def GET_names( self, path_info ):
include_expired = False
qs_values = path_info[]
page = qs_values.get(, None)
if page is None:
log.error("Page required")
return self._reply_json({: }, status_code=400)
try:
page = int(page)
... | Get all names in existence
If `all=true` is set, then include expired names.
Returns the list on success
Returns 400 on invalid arguments
Returns 502 on failure to get names |
def _has_population_germline(rec):
for k in population_keys:
if k in rec.header.info:
return True
return False | Check if header defines population annotated germline samples for tumor only. |
def printSegmentForCell(tm, cell):
print "Segments for cell", cell, ":"
for seg in tm.basalConnections._cells[cell]._segments:
print " ",
synapses = seg._synapses
for s in synapses:
print "%d:%g" %(s.presynapticCell,s.permanence),
print | Print segment information for this cell |
def read(self, want=0):
if self._finished:
if self._finished == 1:
self._finished += 1
return ""
return EOFError("EOF reached")
self._want = want
self._add.set()
self._result.wait()
self._result.clear()
... | Read method, gets data from internal buffer while releasing
:meth:`write` locks when needed.
The lock usage means it must ran on a different thread than
:meth:`fill`, ie. the main thread, otherwise will deadlock.
The combination of both write and this method running on different
... |
def get_serializer(name):
try:
log.debug(, name)
return SERIALIZER_LOOKUP[name]
except KeyError:
msg = .format(name)
log.error(msg, exc_info=True)
raise InvalidSerializerException(msg) | Return the serialize function. |
def _shrink_file(dicom_file_in, subsample_factor):
dicom_file_out = dicom_file_in
dicom_in = compressed_dicom.read_file(dicom_file_in)
file_meta = pydicom.dataset.Dataset()
for key, value in dicom_in.file_meta.items():
file_meta.add(value)
dicom_out... | Anonimize a single dicomfile
:param dicom_file_in: filepath for input file
:param dicom_file_out: filepath for output file
:param fields_to_keep: dicom tags to keep |
def _build_urlmapping(urls, strict_slashes=False, **kwargs):
rules = _build_rules(urls)
return Map(rules=list(rules), strict_slashes=strict_slashes, **kwargs) | Convers the anillo urlmappings list into
werkzeug Map instance.
:return: a werkzeug Map instance
:rtype: Map |
def _deserialize_datetime(self, data):
for key in data:
if isinstance(data[key], dict):
if data[key].get() == :
data[key] = \
datetime.datetime.fromtimestamp(data[key][])
return data | Take any values coming in as a datetime and deserialize them |
def login(self, token, use_token=True, mount_point=DEFAULT_MOUNT_POINT):
params = {
: token,
}
api_path = .format(mount_point=mount_point)
return self._adapter.login(
url=api_path,
use_token=use_token,
json=params,
) | Login using GitHub access token.
Supported methods:
POST: /auth/{mount_point}/login. Produces: 200 application/json
:param token: GitHub personal API token.
:type token: str | unicode
:param use_token: if True, uses the token in the response received from the auth request ... |
def _on_changed(self):
page = self._get_page()
if not page.flag_autosave:
page.flag_changed = True
self._update_gui_text_tabs() | Slot for changed events |
def date_parser(items):
try:
dt = datetime.strptime(items,"%d/%m/%Y %H:%M:%S")
except Exception as e:
try:
dt = datetime.strptime(items,"%m/%d/%Y %H:%M:%S")
except Exception as ee:
raise Exception("error parsing datetime string" +\
... | datetime parser to help load smp files
Parameters
----------
items : iterable
something or somethings to try to parse into datetimes
Returns
-------
dt : iterable
the cast datetime things |
def _send_content(self, content, connection):
if connection:
if connection.async:
callback = connection.callbacks[]
if callback:
callback(self, self.parent_object, content)
self.current_connection.reset()
... | Send a content array from the connection |
def p_new_expr(self, p):
if len(p) == 2:
p[0] = p[1]
else:
p[0] = self.asttypes.NewExpr(p[2])
p[0].setpos(p) | new_expr : member_expr
| NEW new_expr |
def map_nested(function, data_struct, dict_only=False, map_tuple=False):
if isinstance(data_struct, dict):
return {
k: map_nested(function, v, dict_only, map_tuple)
for k, v in data_struct.items()
}
elif not dict_only:
types = [list]
if map_tuple:
types.append(tuple)
... | Apply a function recursively to each element of a nested data struct. |
def setup(self):
self.devman.sort_device()
self.call.setup()
self.model_setup()
self.xy_addr0()
self.dae.setup()
self.to_sysbase()
return self | Set up the power system object by executing the following workflow:
* Sort the loaded models to meet the initialization sequence
* Create call strings for routines
* Call the ``setup`` function of the loaded models
* Assign addresses for the loaded models
* Call ``dae.setup... |
def parse_reports(self):
self.infer_exp = dict()
regexes = {
: r"\"1\+\+,1--,2\+-,2-\+\": (\d\.\d+)",
: r"\"1\+-,1-\+,2\+\+,2--\": (\d\.\d+)",
: r"\"\+\+,--\": (\d\.\d+)",
: r"\+-,-\+\": (\d\.\d+)",
: r"Fraction of reads failed to determine: (\d\.\d+)"
}
... | Find RSeQC infer_experiment reports and parse their data |
def cert_from_instance(instance):
if instance.signature:
if instance.signature.key_info:
return cert_from_key_info(instance.signature.key_info,
ignore_age=True)
return [] | Find certificates that are part of an instance
:param instance: An instance
:return: possible empty list of certificates |
def _decode_image(fobj, session, filename):
buf = fobj.read()
image = tfds.core.lazy_imports.cv2.imdecode(
np.fromstring(buf, dtype=np.uint8), flags=3)
if image is None:
logging.warning(
"Image %s could not be decoded by OpenCV, falling back to TF", filename)
try:
image = tf.imag... | Reads and decodes an image from a file object as a Numpy array.
The SUN dataset contains images in several formats (despite the fact that
all of them have .jpg extension). Some of them are:
- BMP (RGB)
- PNG (grayscale, RGBA, RGB interlaced)
- JPEG (RGB)
- GIF (1-frame RGB)
Since TFDS assumes tha... |
def scopes(self):
if not self.__scopes:
self.__scopes = Scopes(self.__connection)
return self.__scopes | Gets the Scopes API client.
Returns:
Scopes: |
def add_default_parameter_values(self, sam_template):
parameter_definition = sam_template.get("Parameters", None)
if not parameter_definition or not isinstance(parameter_definition, dict):
return self.parameter_values
for param_name, value in parameter_definition.items():
... | Method to read default values for template parameters and merge with user supplied values.
Example:
If the template contains the following parameters defined
Parameters:
Param1:
Type: String
Default: default_value
Param2:
... |
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