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def area2lonlat(dataarray): area = dataarray.attrs['area'] lons, lats = area.get_lonlats_dask() lons = xr.DataArray(lons, dims=['y', 'x'], attrs={'name': "longitude", 'standard_name': "longitude", 'units': 'degrees_east'}, name='longitude') lats = xr.DataArray(lats, dims=['y', 'x'], attrs={'name': "latitude", 'standard_name': "latitude", 'units': 'degrees_north'}, name='latitude') dataarray.attrs['coordinates'] = 'longitude latitude' return [dataarray, lons, lats]
module function_definition identifier parameters identifier block expression_statement assignment identifier subscript attribute identifier identifier string string_start string_content string_end expression_statement assignment pattern_list identifier identifier call attribute identifier identifier argument_list expression_statement assignment identifier call attribute identifier identifier argument_list identifier keyword_argument identifier list string string_start string_content string_end string string_start string_content string_end keyword_argument identifier dictionary pair string string_start string_content string_end string string_start string_content string_end pair string string_start string_content string_end string string_start string_content string_end pair string string_start string_content string_end string string_start string_content string_end keyword_argument identifier string string_start string_content string_end expression_statement assignment identifier call attribute identifier identifier argument_list identifier keyword_argument identifier list string string_start string_content string_end string string_start string_content string_end keyword_argument identifier dictionary pair string string_start string_content string_end string string_start string_content string_end pair string string_start string_content string_end string string_start string_content string_end pair string string_start string_content string_end string string_start string_content string_end keyword_argument identifier string string_start string_content string_end expression_statement assignment subscript attribute identifier identifier string string_start string_content string_end string string_start string_content string_end return_statement list identifier identifier identifier
Convert an area to longitudes and latitudes.
def explorev2(self, datasource_type, datasource_id): return redirect(url_for( 'Superset.explore', datasource_type=datasource_type, datasource_id=datasource_id, **request.args))
module function_definition identifier parameters identifier identifier identifier block return_statement call identifier argument_list call identifier argument_list string string_start string_content string_end keyword_argument identifier identifier keyword_argument identifier identifier dictionary_splat attribute identifier identifier
Deprecated endpoint, here for backward compatibility of urls
def force_single_imports(self): for import_stmt in self.imports[:]: import_info = import_stmt.import_info if import_info.is_empty() or import_stmt.readonly: continue if len(import_info.names_and_aliases) > 1: for name_and_alias in import_info.names_and_aliases: if hasattr(import_info, "module_name"): new_import = importinfo.FromImport( import_info.module_name, import_info.level, [name_and_alias]) else: new_import = importinfo.NormalImport([name_and_alias]) self.add_import(new_import) import_stmt.empty_import()
module function_definition identifier parameters identifier block for_statement identifier subscript attribute identifier identifier slice block expression_statement assignment identifier attribute identifier identifier if_statement boolean_operator call attribute identifier identifier argument_list attribute identifier identifier block continue_statement if_statement comparison_operator call identifier argument_list attribute identifier identifier integer block for_statement identifier attribute identifier identifier block if_statement call identifier argument_list identifier string string_start string_content string_end block expression_statement assignment identifier call attribute identifier identifier argument_list attribute identifier identifier attribute identifier identifier list identifier else_clause block expression_statement assignment identifier call attribute identifier identifier argument_list list identifier expression_statement call attribute identifier identifier argument_list identifier expression_statement call attribute identifier identifier argument_list
force a single import per statement
def update_ticket(self, ticket_id, **kwargs): url = 'tickets/%d' % ticket_id ticket = self._api._put(url, data=json.dumps(kwargs)) return Ticket(**ticket)
module function_definition identifier parameters identifier identifier dictionary_splat_pattern identifier block expression_statement assignment identifier binary_operator string string_start string_content string_end identifier expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list identifier keyword_argument identifier call attribute identifier identifier argument_list identifier return_statement call identifier argument_list dictionary_splat identifier
Updates a ticket from a given ticket ID
def subset(data, sel0, sel1): data = np.asarray(data) if data.ndim < 2: raise ValueError('data must have 2 or more dimensions') sel0 = asarray_ndim(sel0, 1, allow_none=True) sel1 = asarray_ndim(sel1, 1, allow_none=True) if sel0 is not None and sel0.dtype.kind == 'b': sel0, = np.nonzero(sel0) if sel1 is not None and sel1.dtype.kind == 'b': sel1, = np.nonzero(sel1) if sel0 is not None and sel1 is not None: sel0 = sel0[:, np.newaxis] if sel0 is None: sel0 = _total_slice if sel1 is None: sel1 = _total_slice return data[sel0, sel1]
module function_definition identifier parameters identifier identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier if_statement comparison_operator attribute identifier identifier integer block raise_statement call identifier argument_list string string_start string_content string_end expression_statement assignment identifier call identifier argument_list identifier integer keyword_argument identifier true expression_statement assignment identifier call identifier argument_list identifier integer keyword_argument identifier true if_statement boolean_operator comparison_operator identifier none comparison_operator attribute attribute identifier identifier identifier string string_start string_content string_end block expression_statement assignment pattern_list identifier call attribute identifier identifier argument_list identifier if_statement boolean_operator comparison_operator identifier none comparison_operator attribute attribute identifier identifier identifier string string_start string_content string_end block expression_statement assignment pattern_list identifier call attribute identifier identifier argument_list identifier if_statement boolean_operator comparison_operator identifier none comparison_operator identifier none block expression_statement assignment identifier subscript identifier slice attribute identifier identifier if_statement comparison_operator identifier none block expression_statement assignment identifier identifier if_statement comparison_operator identifier none block expression_statement assignment identifier identifier return_statement subscript identifier identifier identifier
Apply selections on first and second axes.
def _dismiss_worker(self, worker): self._workers.remove(worker) if len(self._workers) < self._min_workers: self._workers.add(worker) return False return True
module function_definition identifier parameters identifier identifier block expression_statement call attribute attribute identifier identifier identifier argument_list identifier if_statement comparison_operator call identifier argument_list attribute identifier identifier attribute identifier identifier block expression_statement call attribute attribute identifier identifier identifier argument_list identifier return_statement false return_statement true
Dismiss ``worker`` unless it is still required
def get(self, thread_uuid, uuid): members = (v for v in self.list(thread_uuid) if v.get('userUuid') == uuid) for i in members: self.log.debug(i) return i return None
module function_definition identifier parameters identifier identifier identifier block expression_statement assignment identifier generator_expression identifier for_in_clause identifier call attribute identifier identifier argument_list identifier if_clause comparison_operator call attribute identifier identifier argument_list string string_start string_content string_end identifier for_statement identifier identifier block expression_statement call attribute attribute identifier identifier identifier argument_list identifier return_statement identifier return_statement none
Get one thread member.
def crashlog_clean(name, timestamp, size, **kwargs): ctx = Context(**kwargs) ctx.execute_action('crashlog:clean', **{ 'storage': ctx.repo.create_secure_service('storage'), 'name': name, 'size': size, 'timestamp': timestamp, })
module function_definition identifier parameters identifier identifier identifier dictionary_splat_pattern identifier block expression_statement assignment identifier call identifier argument_list dictionary_splat identifier expression_statement call attribute identifier identifier argument_list string string_start string_content string_end dictionary_splat dictionary pair string string_start string_content string_end call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end pair string string_start string_content string_end identifier pair string string_start string_content string_end identifier pair string string_start string_content string_end identifier
For application NAME leave SIZE crashlogs or remove all crashlogs with timestamp > TIMESTAMP.
def wait_for_ssh(ip): for _ in range(12): with safe_socket() as s: try: s.connect((ip, 22)) return True except socket.timeout: pass time.sleep(10) return False
module function_definition identifier parameters identifier block for_statement identifier call identifier argument_list integer block with_statement with_clause with_item as_pattern call identifier argument_list as_pattern_target identifier block try_statement block expression_statement call attribute identifier identifier argument_list tuple identifier integer return_statement true except_clause attribute identifier identifier block pass_statement expression_statement call attribute identifier identifier argument_list integer return_statement false
Wait for SSH to be available at given IP address.
def _extract_germline(in_file, data): out_file = "%s-germline.vcf" % utils.splitext_plus(in_file)[0] if not utils.file_uptodate(out_file, in_file) and not utils.file_uptodate(out_file + ".gz", in_file): with file_transaction(data, out_file) as tx_out_file: reader = cyvcf2.VCF(str(in_file)) reader.add_filter_to_header({'ID': 'Somatic', 'Description': 'Variant called as Somatic'}) with open(tx_out_file, "w") as out_handle: out_handle.write(reader.raw_header) for rec in reader: rec = _update_germline_filters(rec) out_handle.write(str(rec)) return out_file
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier binary_operator string string_start string_content string_end subscript call attribute identifier identifier argument_list identifier integer if_statement boolean_operator not_operator call attribute identifier identifier argument_list identifier identifier not_operator call attribute identifier identifier argument_list binary_operator identifier string string_start string_content string_end identifier block with_statement with_clause with_item as_pattern call identifier argument_list identifier identifier as_pattern_target identifier block expression_statement assignment identifier call attribute identifier identifier argument_list call identifier argument_list identifier expression_statement call attribute identifier identifier argument_list dictionary pair string string_start string_content string_end string string_start string_content string_end pair string string_start string_content string_end string string_start string_content string_end with_statement with_clause with_item as_pattern call identifier argument_list identifier string string_start string_content string_end as_pattern_target identifier block expression_statement call attribute identifier identifier argument_list attribute identifier identifier for_statement identifier identifier block expression_statement assignment identifier call identifier argument_list identifier expression_statement call attribute identifier identifier argument_list call identifier argument_list identifier return_statement identifier
Extract germline calls non-somatic, non-filtered calls.
def _attach_config(mfg_event, record): if 'config' not in record.metadata: return attachment = mfg_event.attachment.add() attachment.name = 'config' attachment.value_binary = _convert_object_to_json(record.metadata['config']) attachment.type = test_runs_pb2.TEXT_UTF8
module function_definition identifier parameters identifier identifier block if_statement comparison_operator string string_start string_content string_end attribute identifier identifier block return_statement expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list expression_statement assignment attribute identifier identifier string string_start string_content string_end expression_statement assignment attribute identifier identifier call identifier argument_list subscript attribute identifier identifier string string_start string_content string_end expression_statement assignment attribute identifier identifier attribute identifier identifier
Attaches the OpenHTF config file as JSON.
def OnTextSize(self, event): try: size = int(event.GetString()) except Exception: size = get_default_font().GetPointSize() post_command_event(self, self.FontSizeMsg, size=size)
module function_definition identifier parameters identifier identifier block try_statement block expression_statement assignment identifier call identifier argument_list call attribute identifier identifier argument_list except_clause identifier block expression_statement assignment identifier call attribute call identifier argument_list identifier argument_list expression_statement call identifier argument_list identifier attribute identifier identifier keyword_argument identifier identifier
Text size combo text event handler
def find_silent_exception(node): return ( isinstance(node, ast.ExceptHandler) and node.type is None and len(node.body) == 1 and isinstance(node.body[0], ast.Pass) )
module function_definition identifier parameters identifier block return_statement parenthesized_expression boolean_operator boolean_operator boolean_operator call identifier argument_list identifier attribute identifier identifier comparison_operator attribute identifier identifier none comparison_operator call identifier argument_list attribute identifier identifier integer call identifier argument_list subscript attribute identifier identifier integer attribute identifier identifier
Finds silent generic exceptions
def timeit(output): b = time.time() yield print output, 'time used: %.3fs' % (time.time()-b)
module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute identifier identifier argument_list expression_statement yield print_statement identifier binary_operator string string_start string_content string_end parenthesized_expression binary_operator call attribute identifier identifier argument_list identifier
If output is string, then print the string and also time used
def percent(self, value: float) -> 'Size': raise_not_number(value) self.maximum = '{}%'.format(value) return self
module function_definition identifier parameters identifier typed_parameter identifier type identifier type string string_start string_content string_end block expression_statement call identifier argument_list identifier expression_statement assignment attribute identifier identifier call attribute string string_start string_content string_end identifier argument_list identifier return_statement identifier
Set the percentage of free space to use.
def register_class(cls): if cls.appname in LinkFactory._class_dict: return LinkFactory.register(cls.appname, cls)
module function_definition identifier parameters identifier block if_statement comparison_operator attribute identifier identifier attribute identifier identifier block return_statement expression_statement call attribute identifier identifier argument_list attribute identifier identifier identifier
Regsiter this class in the `LinkFactory`
def sendTemplate(mailer, sender, recipient, template, context, hook=_nop): headers, parts = template.evaluate(context) headers["From"] = sender headers["To"] = recipient hook(headers, parts) content = mime.buildMessage(headers, parts) return mailer.send(sender, recipient, content)
module function_definition identifier parameters identifier identifier identifier identifier identifier default_parameter identifier identifier block expression_statement assignment pattern_list identifier identifier call attribute identifier identifier argument_list identifier expression_statement assignment subscript identifier string string_start string_content string_end identifier expression_statement assignment subscript identifier string string_start string_content string_end identifier expression_statement call identifier argument_list identifier identifier expression_statement assignment identifier call attribute identifier identifier argument_list identifier identifier return_statement call attribute identifier identifier argument_list identifier identifier identifier
Simple case for sending some e-mail using a template.
def index(self, alias): clone = self._clone() clone._index = alias return clone
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list expression_statement assignment attribute identifier identifier identifier return_statement identifier
Selects which database this QuerySet should execute its query against.
def page_response(self, title='', body=''): f = StringIO() f.write('<!DOCTYPE html>\n') f.write('<html>\n') f.write('<head><title>{}</title><head>\n'.format(title)) f.write('<body>\n<h2>{}</h2>\n'.format(title)) f.write('<div class="content">{}</div>\n'.format(body)) f.write('</body>\n</html>\n') length = f.tell() f.seek(0) self.send_response(200) encoding = sys.getfilesystemencoding() self.send_header("Content-type", "text/html; charset=%s" % encoding) self.send_header("Content-Length", str(length)) self.end_headers() self.copyfile(f, self.wfile) f.close()
module function_definition identifier parameters identifier default_parameter identifier string string_start string_end default_parameter identifier string string_start string_end block expression_statement assignment identifier call identifier argument_list expression_statement call attribute identifier identifier argument_list string string_start string_content escape_sequence string_end expression_statement call attribute identifier identifier argument_list string string_start string_content escape_sequence string_end expression_statement call attribute identifier identifier argument_list call attribute string string_start string_content escape_sequence string_end identifier argument_list identifier expression_statement call attribute identifier identifier argument_list call attribute string string_start string_content escape_sequence escape_sequence string_end identifier argument_list identifier expression_statement call attribute identifier identifier argument_list call attribute string string_start string_content escape_sequence string_end identifier argument_list identifier expression_statement call attribute identifier identifier argument_list string string_start string_content escape_sequence escape_sequence string_end expression_statement assignment identifier call attribute identifier identifier argument_list expression_statement call attribute identifier identifier argument_list integer expression_statement call attribute identifier identifier argument_list integer expression_statement assignment identifier call attribute identifier identifier argument_list expression_statement call attribute identifier identifier argument_list string string_start string_content string_end binary_operator string string_start string_content string_end identifier expression_statement call attribute identifier identifier argument_list string string_start string_content string_end call identifier argument_list identifier expression_statement call attribute identifier identifier argument_list expression_statement call attribute identifier identifier argument_list identifier attribute identifier identifier expression_statement call attribute identifier identifier argument_list
Helper to render an html page with dynamic content
def _copy_source_to_target(self): if self.source and self.target: for k, v in self.source.items('config'): self.target.set_input(k, v)
module function_definition identifier parameters identifier block if_statement boolean_operator attribute identifier identifier attribute identifier identifier block for_statement pattern_list identifier identifier call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end block expression_statement call attribute attribute identifier identifier identifier argument_list identifier identifier
copy source user configuration to target
def fasta_cmd_get_seqs(acc_list, blast_db=None, is_protein=None, out_filename=None, params={}, WorkingDir=tempfile.gettempdir(), SuppressStderr=None, SuppressStdout=None): if is_protein is None: params["-p"] = 'G' elif is_protein: params["-p"] = 'T' else: params["-p"] = 'F' if blast_db: params["-d"] = blast_db if out_filename: params["-o"] = out_filename params["-a"] = "F" fasta_cmd = FastaCmd(params=params, InputHandler='_input_as_string', WorkingDir=WorkingDir, SuppressStderr=SuppressStderr, SuppressStdout=SuppressStdout) return fasta_cmd("\"%s\"" % ','.join(acc_list))
module function_definition identifier parameters identifier default_parameter identifier none default_parameter identifier none default_parameter identifier none default_parameter identifier dictionary default_parameter identifier call attribute identifier identifier argument_list default_parameter identifier none default_parameter identifier none block if_statement comparison_operator identifier none block expression_statement assignment subscript identifier string string_start string_content string_end string string_start string_content string_end elif_clause identifier block expression_statement assignment subscript identifier string string_start string_content string_end string string_start string_content string_end else_clause block expression_statement assignment subscript identifier string string_start string_content string_end string string_start string_content string_end if_statement identifier block expression_statement assignment subscript identifier string string_start string_content string_end identifier if_statement identifier block expression_statement assignment subscript identifier string string_start string_content string_end identifier expression_statement assignment subscript identifier string string_start string_content string_end string string_start string_content string_end expression_statement assignment identifier call identifier argument_list keyword_argument identifier identifier keyword_argument identifier string string_start string_content string_end keyword_argument identifier identifier keyword_argument identifier identifier keyword_argument identifier identifier return_statement call identifier argument_list binary_operator string string_start string_content escape_sequence escape_sequence string_end call attribute string string_start string_content string_end identifier argument_list identifier
Retrieve sequences for list of accessions
def check_bbox(bbox): for name, value in zip(['x_min', 'y_min', 'x_max', 'y_max'], bbox[:4]): if not 0 <= value <= 1: raise ValueError( 'Expected {name} for bbox {bbox} ' 'to be in the range [0.0, 1.0], got {value}.'.format( bbox=bbox, name=name, value=value, ) ) x_min, y_min, x_max, y_max = bbox[:4] if x_max <= x_min: raise ValueError('x_max is less than or equal to x_min for bbox {bbox}.'.format( bbox=bbox, )) if y_max <= y_min: raise ValueError('y_max is less than or equal to y_min for bbox {bbox}.'.format( bbox=bbox, ))
module function_definition identifier parameters identifier block for_statement pattern_list identifier identifier call identifier argument_list list string string_start string_content string_end string string_start string_content string_end string string_start string_content string_end string string_start string_content string_end subscript identifier slice integer block if_statement not_operator comparison_operator integer identifier integer block raise_statement call identifier argument_list call attribute concatenated_string string string_start string_content string_end string string_start string_content string_end identifier argument_list keyword_argument identifier identifier keyword_argument identifier identifier keyword_argument identifier identifier expression_statement assignment pattern_list identifier identifier identifier identifier subscript identifier slice integer if_statement comparison_operator identifier identifier block raise_statement call identifier argument_list call attribute string string_start string_content string_end identifier argument_list keyword_argument identifier identifier if_statement comparison_operator identifier identifier block raise_statement call identifier argument_list call attribute string string_start string_content string_end identifier argument_list keyword_argument identifier identifier
Check if bbox boundaries are in range 0, 1 and minimums are lesser then maximums
def compliance(self, value): if (self.api_version < '2.0'): self.profile = value else: try: self.profile[0] = value except AttributeError: self.profile = [value]
module function_definition identifier parameters identifier identifier block if_statement parenthesized_expression comparison_operator attribute identifier identifier string string_start string_content string_end block expression_statement assignment attribute identifier identifier identifier else_clause block try_statement block expression_statement assignment subscript attribute identifier identifier integer identifier except_clause identifier block expression_statement assignment attribute identifier identifier list identifier
Set the compliance profile URI.
def _needs_elements(self, f): @wraps(f) def wrapper(self, *args, **kwargs): if self.elements == None: self.getelements() return f(self, *args, **kwargs) return wrapper
module function_definition identifier parameters identifier identifier block decorated_definition decorator call identifier argument_list identifier function_definition identifier parameters identifier list_splat_pattern identifier dictionary_splat_pattern identifier block if_statement comparison_operator attribute identifier identifier none block expression_statement call attribute identifier identifier argument_list return_statement call identifier argument_list identifier list_splat identifier dictionary_splat identifier return_statement identifier
Decorator used to make sure that there are elements prior to running the task.
def _delete_chars(self, value): value = int(value) if value <= 0: value = 1 for i in range(value): self._cursor.deleteChar() self._text_edit.setTextCursor(self._cursor) self._last_cursor_pos = self._cursor.position()
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call identifier argument_list identifier if_statement comparison_operator identifier integer block expression_statement assignment identifier integer for_statement identifier call identifier argument_list identifier block expression_statement call attribute attribute identifier identifier identifier argument_list expression_statement call attribute attribute identifier identifier identifier argument_list attribute identifier identifier expression_statement assignment attribute identifier identifier call attribute attribute identifier identifier identifier argument_list
Deletes the specified number of charachters.
def _transform_coefficients(self, NN, HHw, CCw, ffparm, polycf, any_pwl, npol, nw): nnw = any_pwl + npol + nw M = csr_matrix((ffparm[:, 3], (range(nnw), range(nnw)))) MR = M * ffparm[:, 2] HMR = HHw * MR MN = M * NN HH = MN.T * HHw * MN CC = MN.T * (CCw - HMR) C0 = 1./2. * MR.T * HMR + sum(polycf[:, 2]) return HH, CC, C0[0]
module function_definition identifier parameters identifier identifier identifier identifier identifier identifier identifier identifier identifier block expression_statement assignment identifier binary_operator binary_operator identifier identifier identifier expression_statement assignment identifier call identifier argument_list tuple subscript identifier slice integer tuple call identifier argument_list identifier call identifier argument_list identifier expression_statement assignment identifier binary_operator identifier subscript identifier slice integer expression_statement assignment identifier binary_operator identifier identifier expression_statement assignment identifier binary_operator identifier identifier expression_statement assignment identifier binary_operator binary_operator attribute identifier identifier identifier identifier expression_statement assignment identifier binary_operator attribute identifier identifier parenthesized_expression binary_operator identifier identifier expression_statement assignment identifier binary_operator binary_operator binary_operator binary_operator float float attribute identifier identifier identifier call identifier argument_list subscript identifier slice integer return_statement expression_list identifier identifier subscript identifier integer
Transforms quadratic coefficients for w into coefficients for x.
def generate_route(self, route): self.emit('') self.emit('route %s (%s, %s, %s)' % ( route.name, self.format_data_type(route.arg_data_type), self.format_data_type(route.result_data_type), self.format_data_type(route.error_data_type) )) with self.indent(): if route.doc is not None: self.emit(self.format_string(route.doc))
module function_definition identifier parameters identifier identifier block expression_statement call attribute identifier identifier argument_list string string_start string_end expression_statement call attribute identifier identifier argument_list binary_operator string string_start string_content string_end tuple attribute identifier identifier call attribute identifier identifier argument_list attribute identifier identifier call attribute identifier identifier argument_list attribute identifier identifier call attribute identifier identifier argument_list attribute identifier identifier with_statement with_clause with_item call attribute identifier identifier argument_list block if_statement comparison_operator attribute identifier identifier none block expression_statement call attribute identifier identifier argument_list call attribute identifier identifier argument_list attribute identifier identifier
Output a route definition.
def _refresh_path(self): if os.path.exists(self.path): try: i = open(self.path, 'r') i.close() juicer.utils.Log.log_debug("Successfully read item at: %s" % self.path) except: raise IOError("Error while attempting to access item at path: %s" % self.path) else: raise IOError("Could not locate item at path: %s" % self.path)
module function_definition identifier parameters identifier block if_statement call attribute attribute identifier identifier identifier argument_list attribute identifier identifier block try_statement block expression_statement assignment identifier call identifier argument_list attribute identifier identifier string string_start string_content string_end expression_statement call attribute identifier identifier argument_list expression_statement call attribute attribute attribute identifier identifier identifier identifier argument_list binary_operator string string_start string_content string_end attribute identifier identifier except_clause block raise_statement call identifier argument_list binary_operator string string_start string_content string_end attribute identifier identifier else_clause block raise_statement call identifier argument_list binary_operator string string_start string_content string_end attribute identifier identifier
Does it exist? Can we read it? Is it an RPM?
def __create_xml_request(self, text): soap_root = ET.Element('soap:Envelope', { 'xmlns:xsi': 'http://www.w3.org/2001/XMLSchema-instance', 'xmlns:xsd': 'http://www.w3.org/2001/XMLSchema', 'xmlns:soap': 'http://schemas.xmlsoap.org/soap/envelope/', }) body = ET.SubElement(soap_root, 'soap:Body') process_text = ET.SubElement(body, 'ProcessText', { 'xmlns': 'http://typograf.artlebedev.ru/webservices/', }) ET.SubElement(process_text, 'text').text = text ET.SubElement(process_text, 'entityType').text = str(self._entityType) ET.SubElement(process_text, 'useBr').text = str(self._useBr) ET.SubElement(process_text, 'useP').text = str(self._useP) ET.SubElement(process_text, 'maxNobr').text = str(self._maxNobr) string = Container() soap = ET.ElementTree(soap_root) soap.write(string, encoding=self._encoding, xml_declaration=True) if PY3: return string.getvalue().decode(self._encoding) return string.getvalue()
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list string string_start string_content string_end dictionary pair string string_start string_content string_end string string_start string_content string_end pair string string_start string_content string_end string string_start string_content string_end pair string string_start string_content string_end string string_start string_content string_end expression_statement assignment identifier call attribute identifier identifier argument_list identifier string string_start string_content string_end expression_statement assignment identifier call attribute identifier identifier argument_list identifier string string_start string_content string_end dictionary pair string string_start string_content string_end string string_start string_content string_end expression_statement assignment attribute call attribute identifier identifier argument_list identifier string string_start string_content string_end identifier identifier expression_statement assignment attribute call attribute identifier identifier argument_list identifier string string_start string_content string_end identifier call identifier argument_list attribute identifier identifier expression_statement assignment attribute call attribute identifier identifier argument_list identifier string string_start string_content string_end identifier call identifier argument_list attribute identifier identifier expression_statement assignment attribute call attribute identifier identifier argument_list identifier string string_start string_content string_end identifier call identifier argument_list attribute identifier identifier expression_statement assignment attribute call attribute identifier identifier argument_list identifier string string_start string_content string_end identifier call identifier argument_list attribute identifier identifier expression_statement assignment identifier call identifier argument_list expression_statement assignment identifier call attribute identifier identifier argument_list identifier expression_statement call attribute identifier identifier argument_list identifier keyword_argument identifier attribute identifier identifier keyword_argument identifier true if_statement identifier block return_statement call attribute call attribute identifier identifier argument_list identifier argument_list attribute identifier identifier return_statement call attribute identifier identifier argument_list
make xml content from given text
def register_single(key, value, param=None): get_current_scope().container.register(key, lambda: value, param)
module function_definition identifier parameters identifier identifier default_parameter identifier none block expression_statement call attribute attribute call identifier argument_list identifier identifier argument_list identifier lambda identifier identifier
Generates resolver to return singleton value and adds it to global container
def apply_filters(df, filters): idx = pd.Series([True]*df.shape[0]) for k, v in list(filters.items()): if k not in df.columns: continue idx &= (df[k] == v) return df.loc[idx]
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list binary_operator list true subscript attribute identifier identifier integer for_statement pattern_list identifier identifier call identifier argument_list call attribute identifier identifier argument_list block if_statement comparison_operator identifier attribute identifier identifier block continue_statement expression_statement augmented_assignment identifier parenthesized_expression comparison_operator subscript identifier identifier identifier return_statement subscript attribute identifier identifier identifier
Basic filtering for a dataframe.
def setdefault(obj, field, default): setattr(obj, field, getattr(obj, field, default))
module function_definition identifier parameters identifier identifier identifier block expression_statement call identifier argument_list identifier identifier call identifier argument_list identifier identifier identifier
Set an object's field to default if it doesn't have a value
def _check_descendant(self, item): children = self.get_children(item) for iid in children: self.change_state(iid, "checked") self._check_descendant(iid)
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier for_statement identifier identifier block expression_statement call attribute identifier identifier argument_list identifier string string_start string_content string_end expression_statement call attribute identifier identifier argument_list identifier
Check the boxes of item's descendants.
def _dataChanged(self, item): index = self.items.index(item) qindex = self.createIndex(index, 0) self.dataChanged.emit(qindex, qindex)
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list identifier expression_statement assignment identifier call attribute identifier identifier argument_list identifier integer expression_statement call attribute attribute identifier identifier identifier argument_list identifier identifier
Explicitly emit dataChanged upon item changing
def copy_abiext(self, inext, outext): infile = self.has_abiext(inext) if not infile: raise RuntimeError('no file with extension %s in %s' % (inext, self)) for i in range(len(infile) - 1, -1, -1): if infile[i] == '_': break else: raise RuntimeError('Extension %s could not be detected in file %s' % (inext, infile)) outfile = infile[:i] + '_' + outext shutil.copy(infile, outfile) return 0
module function_definition identifier parameters identifier identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier if_statement not_operator identifier block raise_statement call identifier argument_list binary_operator string string_start string_content string_end tuple identifier identifier for_statement identifier call identifier argument_list binary_operator call identifier argument_list identifier integer unary_operator integer unary_operator integer block if_statement comparison_operator subscript identifier identifier string string_start string_content string_end block break_statement else_clause block raise_statement call identifier argument_list binary_operator string string_start string_content string_end tuple identifier identifier expression_statement assignment identifier binary_operator binary_operator subscript identifier slice identifier string string_start string_content string_end identifier expression_statement call attribute identifier identifier argument_list identifier identifier return_statement integer
Copy the Abinit file with extension inext to a new file withw extension outext
def add_empty_fields(untl_dict): for element in UNTL_XML_ORDER: if element not in untl_dict: try: py_object = PYUNTL_DISPATCH[element]( content='', qualifier='', ) except: try: py_object = PYUNTL_DISPATCH[element](content='') except: try: py_object = PYUNTL_DISPATCH[element]() except: raise PyuntlException( 'Could not add empty element field.' ) else: untl_dict[element] = [{'content': {}}] else: if not py_object.contained_children: untl_dict[element] = [{'content': ''}] else: untl_dict[element] = [{'content': {}}] else: if not py_object.contained_children: untl_dict[element] = [{'content': '', 'qualifier': ''}] else: untl_dict[element] = [{'content': {}, 'qualifier': ''}] for child in py_object.contained_children: untl_dict[element][0].setdefault('content', {}) untl_dict[element][0]['content'][child] = '' return untl_dict
module function_definition identifier parameters identifier block for_statement identifier identifier block if_statement comparison_operator identifier identifier block try_statement block expression_statement assignment identifier call subscript identifier identifier argument_list keyword_argument identifier string string_start string_end keyword_argument identifier string string_start string_end except_clause block try_statement block expression_statement assignment identifier call subscript identifier identifier argument_list keyword_argument identifier string string_start string_end except_clause block try_statement block expression_statement assignment identifier call subscript identifier identifier argument_list except_clause block raise_statement call identifier argument_list string string_start string_content string_end else_clause block expression_statement assignment subscript identifier identifier list dictionary pair string string_start string_content string_end dictionary else_clause block if_statement not_operator attribute identifier identifier block expression_statement assignment subscript identifier identifier list dictionary pair string string_start string_content string_end string string_start string_end else_clause block expression_statement assignment subscript identifier identifier list dictionary pair string string_start string_content string_end dictionary else_clause block if_statement not_operator attribute identifier identifier block expression_statement assignment subscript identifier identifier list dictionary pair string string_start string_content string_end string string_start string_end pair string string_start string_content string_end string string_start string_end else_clause block expression_statement assignment subscript identifier identifier list dictionary pair string string_start string_content string_end dictionary pair string string_start string_content string_end string string_start string_end for_statement identifier attribute identifier identifier block expression_statement call attribute subscript subscript identifier identifier integer identifier argument_list string string_start string_content string_end dictionary expression_statement assignment subscript subscript subscript subscript identifier identifier integer string string_start string_content string_end identifier string string_start string_end return_statement identifier
Add empty values if UNTL fields don't have values.
def product_path(cls, project, location, product): return google.api_core.path_template.expand( "projects/{project}/locations/{location}/products/{product}", project=project, location=location, product=product, )
module function_definition identifier parameters identifier identifier identifier identifier block return_statement call attribute attribute attribute identifier identifier identifier identifier argument_list string string_start string_content string_end keyword_argument identifier identifier keyword_argument identifier identifier keyword_argument identifier identifier
Return a fully-qualified product string.
def save_image(self, image_file): self.ensure_pyplot() command = 'plt.gcf().savefig("%s")'%image_file self.process_input_line('bookmark ipy_thisdir', store_history=False) self.process_input_line('cd -b ipy_savedir', store_history=False) self.process_input_line(command, store_history=False) self.process_input_line('cd -b ipy_thisdir', store_history=False) self.process_input_line('bookmark -d ipy_thisdir', store_history=False) self.clear_cout()
module function_definition identifier parameters identifier identifier block expression_statement call attribute identifier identifier argument_list expression_statement assignment identifier binary_operator string string_start string_content string_end identifier expression_statement call attribute identifier identifier argument_list string string_start string_content string_end keyword_argument identifier false expression_statement call attribute identifier identifier argument_list string string_start string_content string_end keyword_argument identifier false expression_statement call attribute identifier identifier argument_list identifier keyword_argument identifier false expression_statement call attribute identifier identifier argument_list string string_start string_content string_end keyword_argument identifier false expression_statement call attribute identifier identifier argument_list string string_start string_content string_end keyword_argument identifier false expression_statement call attribute identifier identifier argument_list
Saves the image file to disk.
def status(self, verbose=False): try: response=api(url=self.__url, method="GET", verbose=verbose) except Exception as e: print('Could not get status from CyREST:\n\n' + str(e)) else: print('CyREST online!')
module function_definition identifier parameters identifier default_parameter identifier false block try_statement block expression_statement assignment identifier call identifier argument_list keyword_argument identifier attribute identifier identifier keyword_argument identifier string string_start string_content string_end keyword_argument identifier identifier except_clause as_pattern identifier as_pattern_target identifier block expression_statement call identifier argument_list binary_operator string string_start string_content escape_sequence escape_sequence string_end call identifier argument_list identifier else_clause block expression_statement call identifier argument_list string string_start string_content string_end
Checks the status of your CyREST server.
def binary_report(self, sha256sum, apikey): url = self.base_url + "file/report" params = {"apikey": apikey, "resource": sha256sum} rate_limit_clear = self.rate_limit() if rate_limit_clear: response = requests.post(url, data=params) if response.status_code == self.HTTP_OK: json_response = response.json() response_code = json_response['response_code'] return json_response elif response.status_code == self.HTTP_RATE_EXCEEDED: time.sleep(20) else: self.logger.warning("retrieve report: %s, HTTP code: %d", os.path.basename(filename), response.status_code)
module function_definition identifier parameters identifier identifier identifier block expression_statement assignment identifier binary_operator attribute identifier identifier string string_start string_content string_end expression_statement assignment identifier dictionary pair string string_start string_content string_end identifier pair string string_start string_content string_end identifier expression_statement assignment identifier call attribute identifier identifier argument_list if_statement identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier keyword_argument identifier identifier if_statement comparison_operator attribute identifier identifier attribute identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list expression_statement assignment identifier subscript identifier string string_start string_content string_end return_statement identifier elif_clause comparison_operator attribute identifier identifier attribute identifier identifier block expression_statement call attribute identifier identifier argument_list integer else_clause block expression_statement call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end call attribute attribute identifier identifier identifier argument_list identifier attribute identifier identifier
retrieve report from file scan
def _format_list_objects(result): all_keys = set() for item in result: all_keys = all_keys.union(item.keys()) all_keys = sorted(all_keys) table = Table(all_keys) for item in result: values = [] for key in all_keys: value = iter_to_table(item.get(key)) values.append(value) table.add_row(values) return table
module function_definition identifier parameters identifier block expression_statement assignment identifier call identifier argument_list for_statement identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list call attribute identifier identifier argument_list expression_statement assignment identifier call identifier argument_list identifier expression_statement assignment identifier call identifier argument_list identifier for_statement identifier identifier block expression_statement assignment identifier list for_statement identifier identifier block expression_statement assignment identifier call identifier argument_list call attribute identifier identifier argument_list identifier expression_statement call attribute identifier identifier argument_list identifier expression_statement call attribute identifier identifier argument_list identifier return_statement identifier
Format list of objects into a table.
def delete(self, *args, **kwargs): source_cache = self.get_source_cache() self.delete_thumbnails(source_cache) super(ThumbnailerFieldFile, self).delete(*args, **kwargs) if source_cache and source_cache.pk is not None: source_cache.delete()
module function_definition identifier parameters identifier list_splat_pattern identifier dictionary_splat_pattern identifier block expression_statement assignment identifier call attribute identifier identifier argument_list expression_statement call attribute identifier identifier argument_list identifier expression_statement call attribute call identifier argument_list identifier identifier identifier argument_list list_splat identifier dictionary_splat identifier if_statement boolean_operator identifier comparison_operator attribute identifier identifier none block expression_statement call attribute identifier identifier argument_list
Delete the image, along with any generated thumbnails.
def config_value_changed(option): hook_data = unitdata.HookData() with hook_data(): db = unitdata.kv() current = config(option) saved = db.get(option) db.set(option, current) if saved is None: return False return current != saved
module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute identifier identifier argument_list with_statement with_clause with_item call identifier argument_list block expression_statement assignment identifier call attribute identifier identifier argument_list expression_statement assignment identifier call identifier argument_list identifier expression_statement assignment identifier call attribute identifier identifier argument_list identifier expression_statement call attribute identifier identifier argument_list identifier identifier if_statement comparison_operator identifier none block return_statement false return_statement comparison_operator identifier identifier
Determine if config value changed since last call to this function.
def range_r(self): return self.radius - self.dr, self.radius + self.dr
module function_definition identifier parameters identifier block return_statement expression_list binary_operator attribute identifier identifier attribute identifier identifier binary_operator attribute identifier identifier attribute identifier identifier
Current interpolation range of radius
def compute_message_authenticator(radius_packet, packed_req_authenticator, shared_secret): data = prepare_packed_data(radius_packet, packed_req_authenticator) radius_hmac = hmac.new(shared_secret, data, hashlib.md5) return radius_hmac.digest()
module function_definition identifier parameters identifier identifier identifier block expression_statement assignment identifier call identifier argument_list identifier identifier expression_statement assignment identifier call attribute identifier identifier argument_list identifier identifier attribute identifier identifier return_statement call attribute identifier identifier argument_list
Computes the "Message-Authenticator" of a given RADIUS packet.
def printSequence(x, formatString="%d"): numElements = len(x) s = "" for j in range(numElements): s += formatString % x[j] print s
module function_definition identifier parameters identifier default_parameter identifier string string_start string_content string_end block expression_statement assignment identifier call identifier argument_list identifier expression_statement assignment identifier string string_start string_end for_statement identifier call identifier argument_list identifier block expression_statement augmented_assignment identifier binary_operator identifier subscript identifier identifier print_statement identifier
Compact print a list or numpy array.
def deep_encode(s, encoding='utf-8', errors='strict'): s = deep_encode(s) if sys.version_info.major < 3 and isinstance(s, unicode): return s.encode(encoding, errors) if isinstance(s, (list, tuple)): return [deep_encode(i, encoding=encoding, errors=errors) for i in s] if isinstance(s, dict): return dict([ ( deep_encode(key, encoding=encoding, errors=errors), deep_encode(s[key], encoding=encoding, errors=errors) ) for key in s ]) return s
module function_definition identifier parameters identifier default_parameter identifier string string_start string_content string_end default_parameter identifier string string_start string_content string_end block expression_statement assignment identifier call identifier argument_list identifier if_statement boolean_operator comparison_operator attribute attribute identifier identifier identifier integer call identifier argument_list identifier identifier block return_statement call attribute identifier identifier argument_list identifier identifier if_statement call identifier argument_list identifier tuple identifier identifier block return_statement list_comprehension call identifier argument_list identifier keyword_argument identifier identifier keyword_argument identifier identifier for_in_clause identifier identifier if_statement call identifier argument_list identifier identifier block return_statement call identifier argument_list list_comprehension tuple call identifier argument_list identifier keyword_argument identifier identifier keyword_argument identifier identifier call identifier argument_list subscript identifier identifier keyword_argument identifier identifier keyword_argument identifier identifier for_in_clause identifier identifier return_statement identifier
Encode "DEEP" S using the codec registered for encoding.
def create_order(self, order_deets): request = self._post('transactions/orders', order_deets) return self.responder(request)
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list string string_start string_content string_end identifier return_statement call attribute identifier identifier argument_list identifier
Creates a new order transaction.
def on_get(self, req, resp): resp.content_type = falcon.MEDIA_TEXT resp.status = falcon.HTTP_200 try: containers = docker.from_env() except Exception as e: resp.body = "(False, 'unable to connect to docker because: " + str(e) + "')" return container_list = [] try: for c in containers.containers.list(all=True): if c.attrs['Config']['Image'] == \ 'cyberreboot/vent-ncapture:master': if 'core' not in c.attrs['Config']['Labels']['vent.groups']: lst = {} lst['id'] = c.attrs['Id'][:12] lst['status'] = c.attrs['State']['Status'] lst['args'] = c.attrs['Args'] container_list.append(lst) except Exception as e: resp.body = "(False, 'Failure because: " + str(e) + "')" return resp.body = json.dumps(container_list) return
module function_definition identifier parameters identifier identifier identifier block expression_statement assignment attribute identifier identifier attribute identifier identifier expression_statement assignment attribute identifier identifier attribute identifier identifier try_statement block expression_statement assignment identifier call attribute identifier identifier argument_list except_clause as_pattern identifier as_pattern_target identifier block expression_statement assignment attribute identifier identifier binary_operator binary_operator string string_start string_content string_end call identifier argument_list identifier string string_start string_content string_end return_statement expression_statement assignment identifier list try_statement block for_statement identifier call attribute attribute identifier identifier identifier argument_list keyword_argument identifier true block if_statement comparison_operator subscript subscript attribute identifier identifier string string_start string_content string_end string string_start string_content string_end string string_start string_content string_end block if_statement comparison_operator string string_start string_content string_end subscript subscript subscript attribute identifier identifier string string_start string_content string_end string string_start string_content string_end string string_start string_content string_end block expression_statement assignment identifier dictionary expression_statement assignment subscript identifier string string_start string_content string_end subscript subscript attribute identifier identifier string string_start string_content string_end slice integer expression_statement assignment subscript identifier string string_start string_content string_end subscript subscript attribute identifier identifier string string_start string_content string_end string string_start string_content string_end expression_statement assignment subscript identifier string string_start string_content string_end subscript attribute identifier identifier string string_start string_content string_end expression_statement call attribute identifier identifier argument_list identifier except_clause as_pattern identifier as_pattern_target identifier block expression_statement assignment attribute identifier identifier binary_operator binary_operator string string_start string_content string_end call identifier argument_list identifier string string_start string_content string_end return_statement expression_statement assignment attribute identifier identifier call attribute identifier identifier argument_list identifier return_statement
Send a GET request to get the list of all of the filter containers
def _process_open(self): click.launch(self._format_issue_url()) if not click.confirm('Did it work?', default=True): click.echo() self._process_print() click.secho( '\nOpen the line manually and copy the text above\n', fg='yellow' ) click.secho( ' ' + self.REPO_URL + self.ISSUE_SUFFIX + '\n', bold=True )
module function_definition identifier parameters identifier block expression_statement call attribute identifier identifier argument_list call attribute identifier identifier argument_list if_statement not_operator call attribute identifier identifier argument_list string string_start string_content string_end keyword_argument identifier true block expression_statement call attribute identifier identifier argument_list expression_statement call attribute identifier identifier argument_list expression_statement call attribute identifier identifier argument_list string string_start string_content escape_sequence escape_sequence string_end keyword_argument identifier string string_start string_content string_end expression_statement call attribute identifier identifier argument_list binary_operator binary_operator binary_operator string string_start string_content string_end attribute identifier identifier attribute identifier identifier string string_start string_content escape_sequence string_end keyword_argument identifier true
Open link in a browser.
def _prepare_if_args(stmt): args = stmt['args'] if args and args[0].startswith('(') and args[-1].endswith(')'): args[0] = args[0][1:].lstrip() args[-1] = args[-1][:-1].rstrip() start = int(not args[0]) end = len(args) - int(not args[-1]) args[:] = args[start:end]
module function_definition identifier parameters identifier block expression_statement assignment identifier subscript identifier string string_start string_content string_end if_statement boolean_operator boolean_operator identifier call attribute subscript identifier integer identifier argument_list string string_start string_content string_end call attribute subscript identifier unary_operator integer identifier argument_list string string_start string_content string_end block expression_statement assignment subscript identifier integer call attribute subscript subscript identifier integer slice integer identifier argument_list expression_statement assignment subscript identifier unary_operator integer call attribute subscript subscript identifier unary_operator integer slice unary_operator integer identifier argument_list expression_statement assignment identifier call identifier argument_list not_operator subscript identifier integer expression_statement assignment identifier binary_operator call identifier argument_list identifier call identifier argument_list not_operator subscript identifier unary_operator integer expression_statement assignment subscript identifier slice subscript identifier slice identifier identifier
Removes parentheses from an "if" directive's arguments
def commit(self): if self.session is not None: logger.info("committing transaction in %s" % self) tmp = self.stable self.stable, self.session = self.session, None self.istable = 1 - self.istable self.write_istable() tmp.close() self.lock_update.release() else: logger.warning("commit called but there's no open session in %s" % self)
module function_definition identifier parameters identifier block if_statement comparison_operator attribute identifier identifier none block expression_statement call attribute identifier identifier argument_list binary_operator string string_start string_content string_end identifier expression_statement assignment identifier attribute identifier identifier expression_statement assignment pattern_list attribute identifier identifier attribute identifier identifier expression_list attribute identifier identifier none expression_statement assignment attribute identifier identifier binary_operator integer attribute identifier identifier expression_statement call attribute identifier identifier argument_list expression_statement call attribute identifier identifier argument_list expression_statement call attribute attribute identifier identifier identifier argument_list else_clause block expression_statement call attribute identifier identifier argument_list binary_operator string string_start string_content string_end identifier
Commit changes made by the latest session.
def eigenvalues_(self): utils.validation.check_is_fitted(self, 's_') return np.square(self.s_).tolist()
module function_definition identifier parameters identifier block expression_statement call attribute attribute identifier identifier identifier argument_list identifier string string_start string_content string_end return_statement call attribute call attribute identifier identifier argument_list attribute identifier identifier identifier argument_list
The eigenvalues associated with each principal component.
def tokhex(length=10, urlsafe=False): if urlsafe is True: return secrets.token_urlsafe(length) return secrets.token_hex(length)
module function_definition identifier parameters default_parameter identifier integer default_parameter identifier false block if_statement comparison_operator identifier true block return_statement call attribute identifier identifier argument_list identifier return_statement call attribute identifier identifier argument_list identifier
Return a random string in hexadecimal
def breaks(self, frame, no_remove=False): for breakpoint in set(self.breakpoints): if breakpoint.breaks(frame): if breakpoint.temporary and not no_remove: self.breakpoints.remove(breakpoint) return True return False
module function_definition identifier parameters identifier identifier default_parameter identifier false block for_statement identifier call identifier argument_list attribute identifier identifier block if_statement call attribute identifier identifier argument_list identifier block if_statement boolean_operator attribute identifier identifier not_operator identifier block expression_statement call attribute attribute identifier identifier identifier argument_list identifier return_statement true return_statement false
Return True if there's a breakpoint at frame
def compute(cls, observation, prediction): assert isinstance(observation, dict) try: p_value = prediction['mean'] except (TypeError, KeyError, IndexError): try: p_value = prediction['value'] except (TypeError, IndexError): p_value = prediction o_mean = observation['mean'] o_std = observation['std'] value = (p_value - o_mean)/o_std value = utils.assert_dimensionless(value) if np.isnan(value): score = InsufficientDataScore('One of the input values was NaN') else: score = ZScore(value) return score
module function_definition identifier parameters identifier identifier identifier block assert_statement call identifier argument_list identifier identifier try_statement block expression_statement assignment identifier subscript identifier string string_start string_content string_end except_clause tuple identifier identifier identifier block try_statement block expression_statement assignment identifier subscript identifier string string_start string_content string_end except_clause tuple identifier identifier block expression_statement assignment identifier identifier expression_statement assignment identifier subscript identifier string string_start string_content string_end expression_statement assignment identifier subscript identifier string string_start string_content string_end expression_statement assignment identifier binary_operator parenthesized_expression binary_operator identifier identifier identifier expression_statement assignment identifier call attribute identifier identifier argument_list identifier if_statement call attribute identifier identifier argument_list identifier block expression_statement assignment identifier call identifier argument_list string string_start string_content string_end else_clause block expression_statement assignment identifier call identifier argument_list identifier return_statement identifier
Compute a z-score from an observation and a prediction.
def run_forecast(self): self.prepare_hmet() self.prepare_gag() self.rapid_to_gssha() self.hotstart() return self.run()
module function_definition identifier parameters identifier block expression_statement call attribute identifier identifier argument_list expression_statement call attribute identifier identifier argument_list expression_statement call attribute identifier identifier argument_list expression_statement call attribute identifier identifier argument_list return_statement call attribute identifier identifier argument_list
Updates card & runs for RAPID to GSSHA & LSM to GSSHA
def load_jupyter_server_extension(nbapp): here = PACKAGE_DIR nbapp.log.info('nteract extension loaded from %s' % here) app_dir = here web_app = nbapp.web_app config = NteractConfig(parent=nbapp) config.assets_dir = app_dir config.page_url = '/nteract' config.dev_mode = False core_mode = '' if hasattr(nbapp, 'core_mode'): core_mode = nbapp.core_mode if app_dir == here or app_dir == os.path.join(here, 'build'): core_mode = True config.settings_dir = '' web_app.settings.setdefault('page_config_data', dict()) web_app.settings['page_config_data']['token'] = nbapp.token web_app.settings['page_config_data']['ga_code'] = config.ga_code web_app.settings['page_config_data']['asset_url'] = config.asset_url web_app.settings['nteract_config'] = config add_handlers(web_app, config)
module function_definition identifier parameters identifier block expression_statement assignment identifier identifier expression_statement call attribute attribute identifier identifier identifier argument_list binary_operator string string_start string_content string_end identifier expression_statement assignment identifier identifier expression_statement assignment identifier attribute identifier identifier expression_statement assignment identifier call identifier argument_list keyword_argument identifier identifier expression_statement assignment attribute identifier identifier identifier expression_statement assignment attribute identifier identifier string string_start string_content string_end expression_statement assignment attribute identifier identifier false expression_statement assignment identifier string string_start string_end if_statement call identifier argument_list identifier string string_start string_content string_end block expression_statement assignment identifier attribute identifier identifier if_statement boolean_operator comparison_operator identifier identifier comparison_operator identifier call attribute attribute identifier identifier identifier argument_list identifier string string_start string_content string_end block expression_statement assignment identifier true expression_statement assignment attribute identifier identifier string string_start string_end expression_statement call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end call identifier argument_list expression_statement assignment subscript subscript attribute identifier identifier string string_start string_content string_end string string_start string_content string_end attribute identifier identifier expression_statement assignment subscript subscript attribute identifier identifier string string_start string_content string_end string string_start string_content string_end attribute identifier identifier expression_statement assignment subscript subscript attribute identifier identifier string string_start string_content string_end string string_start string_content string_end attribute identifier identifier expression_statement assignment subscript attribute identifier identifier string string_start string_content string_end identifier expression_statement call identifier argument_list identifier identifier
Load the server extension.
def browse(self): _, path = tempfile.mkstemp() self.save(path) webbrowser.open('file://' + path)
module function_definition identifier parameters identifier block expression_statement assignment pattern_list identifier identifier call attribute identifier identifier argument_list expression_statement call attribute identifier identifier argument_list identifier expression_statement call attribute identifier identifier argument_list binary_operator string string_start string_content string_end identifier
Save response in temporary file and open it in GUI browser.
def visit_Name(self, node): return self.add(node, self.result[node.id])
module function_definition identifier parameters identifier identifier block return_statement call attribute identifier identifier argument_list identifier subscript attribute identifier identifier attribute identifier identifier
Get range for parameters for examples or false branching.
def text(self): txBody = self.txBody if txBody is None: return '' return '\n'.join([p.text for p in txBody.p_lst])
module function_definition identifier parameters identifier block expression_statement assignment identifier attribute identifier identifier if_statement comparison_operator identifier none block return_statement string string_start string_end return_statement call attribute string string_start string_content escape_sequence string_end identifier argument_list list_comprehension attribute identifier identifier for_in_clause identifier attribute identifier identifier
str text contained in cell
def read_variant(variant): result = 0 cnt = 0 for data in variant: result |= (data & 0x7f) << (7 * cnt) cnt += 1 if not data & 0x80: return result, variant[cnt:] raise Exception('invalid variant')
module function_definition identifier parameters identifier block expression_statement assignment identifier integer expression_statement assignment identifier integer for_statement identifier identifier block expression_statement augmented_assignment identifier binary_operator parenthesized_expression binary_operator identifier integer parenthesized_expression binary_operator integer identifier expression_statement augmented_assignment identifier integer if_statement not_operator binary_operator identifier integer block return_statement expression_list identifier subscript identifier slice identifier raise_statement call identifier argument_list string string_start string_content string_end
Read and parse a binary protobuf variant value.
def patch_tree(actions, tree): patcher = patch.Patcher() return patcher.patch(actions, tree)
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list return_statement call attribute identifier identifier argument_list identifier identifier
Takes an lxml root element or element tree, and a list of actions
def cache(cls, id): sampler = {'unit': 'days', 'value': 1, 'function': 'sum'} query = 'webacc.requests.cache.all' metrics = Metric.query(id, 60 * 60 * 24, query, 'paas', sampler) cache = {'hit': 0, 'miss': 0, 'not': 0, 'pass': 0} for metric in metrics: what = metric['cache'].pop() for point in metric['points']: value = point.get('value', 0) cache[what] += value return cache
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier dictionary pair string string_start string_content string_end string string_start string_content string_end pair string string_start string_content string_end integer pair string string_start string_content string_end string string_start string_content string_end expression_statement assignment identifier string string_start string_content string_end expression_statement assignment identifier call attribute identifier identifier argument_list identifier binary_operator binary_operator integer integer integer identifier string string_start string_content string_end identifier expression_statement assignment identifier dictionary pair string string_start string_content string_end integer pair string string_start string_content string_end integer pair string string_start string_content string_end integer pair string string_start string_content string_end integer for_statement identifier identifier block expression_statement assignment identifier call attribute subscript identifier string string_start string_content string_end identifier argument_list for_statement identifier subscript identifier string string_start string_content string_end block expression_statement assignment identifier call attribute identifier identifier argument_list string string_start string_content string_end integer expression_statement augmented_assignment subscript identifier identifier identifier return_statement identifier
return the number of query cache for the last 24H
async def _async_get_sshable_ips(self, ip_addresses): async def _async_ping(ip_address): try: reader, writer = await asyncio.wait_for( asyncio.open_connection(ip_address, 22), timeout=5) except (OSError, TimeoutError): return None try: line = await reader.readline() finally: writer.close() if line.startswith(b'SSH-'): return ip_address ssh_ips = await asyncio.gather(*[ _async_ping(ip_address) for ip_address in ip_addresses ]) return [ ip_address for ip_address in ssh_ips if ip_address is not None ]
module function_definition identifier parameters identifier identifier block function_definition identifier parameters identifier block try_statement block expression_statement assignment pattern_list identifier identifier await call attribute identifier identifier argument_list call attribute identifier identifier argument_list identifier integer keyword_argument identifier integer except_clause tuple identifier identifier block return_statement none try_statement block expression_statement assignment identifier await call attribute identifier identifier argument_list finally_clause block expression_statement call attribute identifier identifier argument_list if_statement call attribute identifier identifier argument_list string string_start string_content string_end block return_statement identifier expression_statement assignment identifier await call attribute identifier identifier argument_list list_splat list_comprehension call identifier argument_list identifier for_in_clause identifier identifier return_statement list_comprehension identifier for_in_clause identifier identifier if_clause comparison_operator identifier none
Return list of all IP address that could be pinged.
def gray2int(graystr): num = bin2int(graystr) num ^= (num >> 8) num ^= (num >> 4) num ^= (num >> 2) num ^= (num >> 1) return num
module function_definition identifier parameters identifier block expression_statement assignment identifier call identifier argument_list identifier expression_statement augmented_assignment identifier parenthesized_expression binary_operator identifier integer expression_statement augmented_assignment identifier parenthesized_expression binary_operator identifier integer expression_statement augmented_assignment identifier parenthesized_expression binary_operator identifier integer expression_statement augmented_assignment identifier parenthesized_expression binary_operator identifier integer return_statement identifier
Convert greycode to binary
def reset_experiment(experiment): redis = _get_redis_connection() experiment = Experiment.find(redis, experiment) if experiment: experiment.reset() return redirect(url_for('.index'))
module function_definition identifier parameters identifier block expression_statement assignment identifier call identifier argument_list expression_statement assignment identifier call attribute identifier identifier argument_list identifier identifier if_statement identifier block expression_statement call attribute identifier identifier argument_list return_statement call identifier argument_list call identifier argument_list string string_start string_content string_end
Delete all data for an experiment.
def to_filter(self, query, arg): return filter_from_url_arg(self.model_cls, query, arg, query_operator=or_)
module function_definition identifier parameters identifier identifier identifier block return_statement call identifier argument_list attribute identifier identifier identifier identifier keyword_argument identifier identifier
Json-server filter using the _or_ operator.
def purge_old_event_logs(delete_before_days=7): delete_before_date = timezone.now() - timedelta(days=delete_before_days) logs_deleted = EventLog.objects.filter( created_on__lte=delete_before_date).delete() return logs_deleted
module function_definition identifier parameters default_parameter identifier integer block expression_statement assignment identifier binary_operator call attribute identifier identifier argument_list call identifier argument_list keyword_argument identifier identifier expression_statement assignment identifier call attribute call attribute attribute identifier identifier identifier argument_list keyword_argument identifier identifier identifier argument_list return_statement identifier
Purges old event logs from the database table
def start_stop_video(self): if self.parent.info.dataset is None: self.parent.statusBar().showMessage('No Dataset Loaded') return if 'Start' in self.idx_button.text().replace('&', ''): try: self.update_video() except IndexError as er: lg.debug(er) self.idx_button.setText('Not Available / Start') return except OSError as er: lg.debug(er) self.idx_button.setText('NO VIDEO for this dataset') return self.idx_button.setText('Stop') elif 'Stop' in self.idx_button.text(): self.idx_button.setText('Start') self.medialistplayer.stop() self.t.stop()
module function_definition identifier parameters identifier block if_statement comparison_operator attribute attribute attribute identifier identifier identifier identifier none block expression_statement call attribute call attribute attribute identifier identifier identifier argument_list identifier argument_list string string_start string_content string_end return_statement if_statement comparison_operator string string_start string_content string_end call attribute call attribute attribute identifier identifier identifier argument_list identifier argument_list string string_start string_content string_end string string_start string_end block try_statement block expression_statement call attribute identifier identifier argument_list except_clause as_pattern identifier as_pattern_target identifier block expression_statement call attribute identifier identifier argument_list identifier expression_statement call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end return_statement except_clause as_pattern identifier as_pattern_target identifier block expression_statement call attribute identifier identifier argument_list identifier expression_statement call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end return_statement expression_statement call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end elif_clause comparison_operator string string_start string_content string_end call attribute attribute identifier identifier identifier argument_list block expression_statement call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end expression_statement call attribute attribute identifier identifier identifier argument_list expression_statement call attribute attribute identifier identifier identifier argument_list
Start and stop the video, and change the button.
def clear_cache(self): super(HyperparameterTuningJobAnalytics, self).clear_cache() self._tuning_job_describe_result = None self._training_job_summaries = None
module function_definition identifier parameters identifier block expression_statement call attribute call identifier argument_list identifier identifier identifier argument_list expression_statement assignment attribute identifier identifier none expression_statement assignment attribute identifier identifier none
Clear the object of all local caches of API methods.
def getPhotos(self): method = 'flickr.photosets.getPhotos' data = _doget(method, photoset_id=self.id) photos = data.rsp.photoset.photo p = [] for photo in photos: p.append(Photo(photo.id, title=photo.title, secret=photo.secret, \ server=photo.server)) return p
module function_definition identifier parameters identifier block expression_statement assignment identifier string string_start string_content string_end expression_statement assignment identifier call identifier argument_list identifier keyword_argument identifier attribute identifier identifier expression_statement assignment identifier attribute attribute attribute identifier identifier identifier identifier expression_statement assignment identifier list for_statement identifier identifier block expression_statement call attribute identifier identifier argument_list call identifier argument_list attribute identifier identifier keyword_argument identifier attribute identifier identifier keyword_argument identifier attribute identifier identifier line_continuation keyword_argument identifier attribute identifier identifier return_statement identifier
Returns list of Photos.
def _find_entity_in_records_by_class_name(self, entity_name): records = { key: value for (key, value) in self._registry.items() if value.name == entity_name } if len(records) > 1: raise ConfigurationError( f'Entity with name {entity_name} has been registered twice. ' f'Please use fully qualified Entity name to specify the exact Entity.') elif len(records) == 1: return next(iter(records.values())) else: raise AssertionError(f'No Entity registered with name {entity_name}')
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier dictionary_comprehension pair identifier identifier for_in_clause tuple_pattern identifier identifier call attribute attribute identifier identifier identifier argument_list if_clause comparison_operator attribute identifier identifier identifier if_statement comparison_operator call identifier argument_list identifier integer block raise_statement call identifier argument_list concatenated_string string string_start string_content interpolation identifier string_content string_end string string_start string_content string_end elif_clause comparison_operator call identifier argument_list identifier integer block return_statement call identifier argument_list call identifier argument_list call attribute identifier identifier argument_list else_clause block raise_statement call identifier argument_list string string_start string_content interpolation identifier string_end
Fetch by Entity Name in values
def _readuntil(f, end=_TYPE_END): buf = bytearray() byte = f.read(1) while byte != end: if byte == b'': raise ValueError('File ended unexpectedly. Expected end byte {}.'.format(end)) buf += byte byte = f.read(1) return buf
module function_definition identifier parameters identifier default_parameter identifier identifier block expression_statement assignment identifier call identifier argument_list expression_statement assignment identifier call attribute identifier identifier argument_list integer while_statement comparison_operator identifier identifier block if_statement comparison_operator identifier string string_start string_end block raise_statement call identifier argument_list call attribute string string_start string_content string_end identifier argument_list identifier expression_statement augmented_assignment identifier identifier expression_statement assignment identifier call attribute identifier identifier argument_list integer return_statement identifier
Helper function to read bytes until a certain end byte is hit
def rejectEdit(self): if self._lineEdit: self._lineEdit.hide() self.editingCancelled.emit()
module function_definition identifier parameters identifier block if_statement attribute identifier identifier block expression_statement call attribute attribute identifier identifier identifier argument_list expression_statement call attribute attribute identifier identifier identifier argument_list
Cancels the edit for this label.
def from_mapping(cls, mapping): group = cls() for name, value in mapping.items(): if name.startswith('_'): continue group[name] = Parameter( name=name, value=value, constraint=Parameter.constraint_from_type(value), ) return group
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call identifier argument_list for_statement pattern_list identifier identifier call attribute identifier identifier argument_list block if_statement call attribute identifier identifier argument_list string string_start string_content string_end block continue_statement expression_statement assignment subscript identifier identifier call identifier argument_list keyword_argument identifier identifier keyword_argument identifier identifier keyword_argument identifier call attribute identifier identifier argument_list identifier return_statement identifier
Produces a set of parameters from a mapping
def keys(self) -> Iterator[str]: if self.param: yield self.param_name yield from self.paths.keys()
module function_definition identifier parameters identifier type generic_type identifier type_parameter type identifier block if_statement attribute identifier identifier block expression_statement yield attribute identifier identifier expression_statement yield call attribute attribute identifier identifier identifier argument_list
return all possible paths one can take from this ApiNode
def save(self, expires=None): if expires is None: expires = self.expires s = self.serialize() key = self._key(self._all_keys()) _cache.set(key, s, expires)
module function_definition identifier parameters identifier default_parameter identifier none block if_statement comparison_operator identifier none block expression_statement assignment identifier attribute identifier identifier expression_statement assignment identifier call attribute identifier identifier argument_list expression_statement assignment identifier call attribute identifier identifier argument_list call attribute identifier identifier argument_list expression_statement call attribute identifier identifier argument_list identifier identifier identifier
Save a copy of the object into the cache.
def loadedfields(self): if self._loadedfields is None: for field in self._meta.scalarfields: yield field else: fields = self._meta.dfields processed = set() for name in self._loadedfields: if name in processed: continue if name in fields: processed.add(name) yield fields[name] else: name = name.split(JSPLITTER)[0] if name in fields and name not in processed: field = fields[name] if field.type == 'json object': processed.add(name) yield field
module function_definition identifier parameters identifier block if_statement comparison_operator attribute identifier identifier none block for_statement identifier attribute attribute identifier identifier identifier block expression_statement yield identifier else_clause block expression_statement assignment identifier attribute attribute identifier identifier identifier expression_statement assignment identifier call identifier argument_list for_statement identifier attribute identifier identifier block if_statement comparison_operator identifier identifier block continue_statement if_statement comparison_operator identifier identifier block expression_statement call attribute identifier identifier argument_list identifier expression_statement yield subscript identifier identifier else_clause block expression_statement assignment identifier subscript call attribute identifier identifier argument_list identifier integer if_statement boolean_operator comparison_operator identifier identifier comparison_operator identifier identifier block expression_statement assignment identifier subscript identifier identifier if_statement comparison_operator attribute identifier identifier string string_start string_content string_end block expression_statement call attribute identifier identifier argument_list identifier expression_statement yield identifier
Generator of fields loaded from database
def archive_namespace(self): try: for ns_prefix, url in self.feed.namespaces.items(): if url == 'http://purl.org/syndication/history/1.0': return ns_prefix except AttributeError: pass return None
module function_definition identifier parameters identifier block try_statement block for_statement pattern_list identifier identifier call attribute attribute attribute identifier identifier identifier identifier argument_list block if_statement comparison_operator identifier string string_start string_content string_end block return_statement identifier except_clause identifier block pass_statement return_statement none
Returns the known namespace of the RFC5005 extension, if any
def load_schema(path): with open(path) as json_data: schema = json.load(json_data) return schema
module function_definition identifier parameters identifier block with_statement with_clause with_item as_pattern call identifier argument_list identifier as_pattern_target identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier return_statement identifier
Loads a JSON schema file.
def _get_perf(text, msg_id): msg = KQMLPerformative('REQUEST') msg.set('receiver', 'READER') content = KQMLList('run-text') content.sets('text', text) msg.set('content', content) msg.set('reply-with', msg_id) return msg
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call identifier argument_list string string_start string_content string_end expression_statement call attribute identifier identifier argument_list string string_start string_content string_end string string_start string_content string_end expression_statement assignment identifier call identifier argument_list string string_start string_content string_end expression_statement call attribute identifier identifier argument_list string string_start string_content string_end identifier expression_statement call attribute identifier identifier argument_list string string_start string_content string_end identifier expression_statement call attribute identifier identifier argument_list string string_start string_content string_end identifier return_statement identifier
Return a request message for a given text.
def add_complex(self, **kwargs): self.check_developer() self.post('developers/%s/complexes/' % self.developer, data=kwargs)
module function_definition identifier parameters identifier dictionary_splat_pattern identifier block expression_statement call attribute identifier identifier argument_list expression_statement call attribute identifier identifier argument_list binary_operator string string_start string_content string_end attribute identifier identifier keyword_argument identifier identifier
Add a new complex to the rumetr db
def _make_info(self, name, stat_result, namespaces): info = { 'basic': { 'name': name, 'is_dir': stat.S_ISDIR(stat_result.st_mode) } } if 'details' in namespaces: info['details'] = self._make_details_from_stat(stat_result) if 'stat' in namespaces: info['stat'] = { k: getattr(stat_result, k) for k in dir(stat_result) if k.startswith('st_') } if 'access' in namespaces: info['access'] = self._make_access_from_stat(stat_result) return Info(info)
module function_definition identifier parameters identifier identifier identifier identifier block expression_statement assignment identifier dictionary pair string string_start string_content string_end dictionary pair string string_start string_content string_end identifier pair string string_start string_content string_end call attribute identifier identifier argument_list attribute identifier identifier if_statement comparison_operator string string_start string_content string_end identifier block expression_statement assignment subscript identifier string string_start string_content string_end call attribute identifier identifier argument_list identifier if_statement comparison_operator string string_start string_content string_end identifier block expression_statement assignment subscript identifier string string_start string_content string_end dictionary_comprehension pair identifier call identifier argument_list identifier identifier for_in_clause identifier call identifier argument_list identifier if_clause call attribute identifier identifier argument_list string string_start string_content string_end if_statement comparison_operator string string_start string_content string_end identifier block expression_statement assignment subscript identifier string string_start string_content string_end call attribute identifier identifier argument_list identifier return_statement call identifier argument_list identifier
Create an `Info` object from a stat result.
def _row_resized(self, row, old_height, new_height): self.dataTable.setRowHeight(row, new_height) self._update_layout()
module function_definition identifier parameters identifier identifier identifier identifier block expression_statement call attribute attribute identifier identifier identifier argument_list identifier identifier expression_statement call attribute identifier identifier argument_list
Update the row height.
def save(self, filething=None, v2_version=4, v23_sep='/', padding=None): fileobj = filething.fileobj iff_file = IFFFile(fileobj) if u'ID3' not in iff_file: iff_file.insert_chunk(u'ID3') chunk = iff_file[u'ID3'] try: data = self._prepare_data( fileobj, chunk.data_offset, chunk.data_size, v2_version, v23_sep, padding) except ID3Error as e: reraise(error, e, sys.exc_info()[2]) new_size = len(data) new_size += new_size % 2 assert new_size % 2 == 0 chunk.resize(new_size) data += (new_size - len(data)) * b'\x00' assert new_size == len(data) chunk.write(data)
module function_definition identifier parameters identifier default_parameter identifier none default_parameter identifier integer default_parameter identifier string string_start string_content string_end default_parameter identifier none block expression_statement assignment identifier attribute identifier identifier expression_statement assignment identifier call identifier argument_list identifier if_statement comparison_operator string string_start string_content string_end identifier block expression_statement call attribute identifier identifier argument_list string string_start string_content string_end expression_statement assignment identifier subscript identifier string string_start string_content string_end try_statement block expression_statement assignment identifier call attribute identifier identifier argument_list identifier attribute identifier identifier attribute identifier identifier identifier identifier identifier except_clause as_pattern identifier as_pattern_target identifier block expression_statement call identifier argument_list identifier identifier subscript call attribute identifier identifier argument_list integer expression_statement assignment identifier call identifier argument_list identifier expression_statement augmented_assignment identifier binary_operator identifier integer assert_statement comparison_operator binary_operator identifier integer integer expression_statement call attribute identifier identifier argument_list identifier expression_statement augmented_assignment identifier binary_operator parenthesized_expression binary_operator identifier call identifier argument_list identifier string string_start string_content escape_sequence string_end assert_statement comparison_operator identifier call identifier argument_list identifier expression_statement call attribute identifier identifier argument_list identifier
Save ID3v2 data to the AIFF file
def indented(text, level, indent=2): return "\n".join("%s%s" % (level * indent * " ", s) for s in text.splitlines())
module function_definition identifier parameters identifier identifier default_parameter identifier integer block return_statement call attribute string string_start string_content escape_sequence string_end identifier generator_expression binary_operator string string_start string_content string_end tuple binary_operator binary_operator identifier identifier string string_start string_content string_end identifier for_in_clause identifier call attribute identifier identifier argument_list
Take a multiline text and indent it as a block
def read_args_tool(toolkey, example_parameters, tool_add_args=None): import scanpy as sc p = default_tool_argparser(help(toolkey), example_parameters) if tool_add_args is None: p = add_args(p) else: p = tool_add_args(p) args = vars(p.parse_args()) args = settings.process_args(args) return args
module function_definition identifier parameters identifier identifier default_parameter identifier none block import_statement aliased_import dotted_name identifier identifier expression_statement assignment identifier call identifier argument_list call identifier argument_list identifier identifier if_statement comparison_operator identifier none block expression_statement assignment identifier call identifier argument_list identifier else_clause block expression_statement assignment identifier call identifier argument_list identifier expression_statement assignment identifier call identifier argument_list call attribute identifier identifier argument_list expression_statement assignment identifier call attribute identifier identifier argument_list identifier return_statement identifier
Read args for single tool.
def validate(self): for name, field in self: try: field.validate_for_object(self) except ValidationError as error: raise ValidationError( "Error for field '{name}'.".format(name=name), error, )
module function_definition identifier parameters identifier block for_statement pattern_list identifier identifier identifier block try_statement block expression_statement call attribute identifier identifier argument_list identifier except_clause as_pattern identifier as_pattern_target identifier block raise_statement call identifier argument_list call attribute string string_start string_content string_end identifier argument_list keyword_argument identifier identifier identifier
Explicitly validate all the fields.
def on_load(self, event): dlg = wx.FileDialog(None, self.settings.get_title(), '', "", '*.*', wx.FD_OPEN) if dlg.ShowModal() == wx.ID_OK: self.settings.load(dlg.GetPath()) for label in self.setting_map.keys(): setting = self.setting_map[label] ctrl = self.controls[label] value = ctrl.GetValue() if isinstance(value, str) or isinstance(value, unicode): ctrl.SetValue(str(setting.value)) else: ctrl.SetValue(setting.value)
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list none call attribute attribute identifier identifier identifier argument_list string string_start string_end string string_start string_end string string_start string_content string_end attribute identifier identifier if_statement comparison_operator call attribute identifier identifier argument_list attribute identifier identifier block expression_statement call attribute attribute identifier identifier identifier argument_list call attribute identifier identifier argument_list for_statement identifier call attribute attribute identifier identifier identifier argument_list block expression_statement assignment identifier subscript attribute identifier identifier identifier expression_statement assignment identifier subscript attribute identifier identifier identifier expression_statement assignment identifier call attribute identifier identifier argument_list if_statement boolean_operator call identifier argument_list identifier identifier call identifier argument_list identifier identifier block expression_statement call attribute identifier identifier argument_list call identifier argument_list attribute identifier identifier else_clause block expression_statement call attribute identifier identifier argument_list attribute identifier identifier
called on load button
def _correct_dims(data): if not hasattr(data, 'dims'): raise TypeError("Data must have a 'dims' attribute.") data = data.copy() if 'y' not in data.dims or 'x' not in data.dims: if data.ndim != 2: raise ValueError("Data must have a 'y' and 'x' dimension") if 'y' not in data.dims: old_dim = [d for d in data.dims if d != 'x'][0] data = data.rename({old_dim: 'y'}) if 'x' not in data.dims: old_dim = [d for d in data.dims if d != 'y'][0] data = data.rename({old_dim: 'x'}) if "bands" not in data.dims: if data.ndim <= 2: data = data.expand_dims('bands') data['bands'] = ['L'] else: raise ValueError("No 'bands' dimension provided.") return data
module function_definition identifier parameters identifier block if_statement not_operator call identifier argument_list identifier string string_start string_content string_end block raise_statement call identifier argument_list string string_start string_content string_end expression_statement assignment identifier call attribute identifier identifier argument_list if_statement boolean_operator comparison_operator string string_start string_content string_end attribute identifier identifier comparison_operator string string_start string_content string_end attribute identifier identifier block if_statement comparison_operator attribute identifier identifier integer block raise_statement call identifier argument_list string string_start string_content string_end if_statement comparison_operator string string_start string_content string_end attribute identifier identifier block expression_statement assignment identifier subscript list_comprehension identifier for_in_clause identifier attribute identifier identifier if_clause comparison_operator identifier string string_start string_content string_end integer expression_statement assignment identifier call attribute identifier identifier argument_list dictionary pair identifier string string_start string_content string_end if_statement comparison_operator string string_start string_content string_end attribute identifier identifier block expression_statement assignment identifier subscript list_comprehension identifier for_in_clause identifier attribute identifier identifier if_clause comparison_operator identifier string string_start string_content string_end integer expression_statement assignment identifier call attribute identifier identifier argument_list dictionary pair identifier string string_start string_content string_end if_statement comparison_operator string string_start string_content string_end attribute identifier identifier block if_statement comparison_operator attribute identifier identifier integer block expression_statement assignment identifier call attribute identifier identifier argument_list string string_start string_content string_end expression_statement assignment subscript identifier string string_start string_content string_end list string string_start string_content string_end else_clause block raise_statement call identifier argument_list string string_start string_content string_end return_statement identifier
Standardize dimensions to bands, y, and x.
def __send_command(self, command, args=[]): self.ws.send(json.dumps({"op": command, "args": args}))
module function_definition identifier parameters identifier identifier default_parameter identifier list block expression_statement call attribute attribute identifier identifier identifier argument_list call attribute identifier identifier argument_list dictionary pair string string_start string_content string_end identifier pair string string_start string_content string_end identifier
Send a raw command.
def period(self): return timedelta(seconds=2 * np.pi * np.sqrt(self.kep.a ** 3 / self.mu))
module function_definition identifier parameters identifier block return_statement call identifier argument_list keyword_argument identifier binary_operator binary_operator integer attribute identifier identifier call attribute identifier identifier argument_list binary_operator binary_operator attribute attribute identifier identifier identifier integer attribute identifier identifier
Period of the orbit as a timedelta
def min_freq(self): i = np.unravel_index(np.argmin(self.bands), self.bands.shape) return self.qpoints[i[1]], self.bands[i]
module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute identifier identifier argument_list call attribute identifier identifier argument_list attribute identifier identifier attribute attribute identifier identifier identifier return_statement expression_list subscript attribute identifier identifier subscript identifier integer subscript attribute identifier identifier identifier
Returns the point where the minimum frequency is reached and its value
def sqlvm_group_list( client, resource_group_name=None): if resource_group_name: return client.list_by_resource_group(resource_group_name=resource_group_name) return client.list()
module function_definition identifier parameters identifier default_parameter identifier none block if_statement identifier block return_statement call attribute identifier identifier argument_list keyword_argument identifier identifier return_statement call attribute identifier identifier argument_list
Lists all SQL virtual machine groups in a resource group or subscription.
def export_datasources(print_stdout, datasource_file, back_references, include_defaults): data = dict_import_export.export_to_dict( session=db.session, recursive=True, back_references=back_references, include_defaults=include_defaults) if print_stdout or not datasource_file: yaml.safe_dump(data, stdout, default_flow_style=False) if datasource_file: logging.info('Exporting datasources to %s', datasource_file) with open(datasource_file, 'w') as data_stream: yaml.safe_dump(data, data_stream, default_flow_style=False)
module function_definition identifier parameters identifier identifier identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list keyword_argument identifier attribute identifier identifier keyword_argument identifier true keyword_argument identifier identifier keyword_argument identifier identifier if_statement boolean_operator identifier not_operator identifier block expression_statement call attribute identifier identifier argument_list identifier identifier keyword_argument identifier false if_statement identifier block expression_statement call attribute identifier identifier argument_list string string_start string_content string_end identifier with_statement with_clause with_item as_pattern call identifier argument_list identifier string string_start string_content string_end as_pattern_target identifier block expression_statement call attribute identifier identifier argument_list identifier identifier keyword_argument identifier false
Export datasources to YAML
def exclude_data_files(self, package, src_dir, files): files = list(files) patterns = self._get_platform_patterns( self.exclude_package_data, package, src_dir, ) match_groups = ( fnmatch.filter(files, pattern) for pattern in patterns ) matches = itertools.chain.from_iterable(match_groups) bad = set(matches) keepers = ( fn for fn in files if fn not in bad ) return list(_unique_everseen(keepers))
module function_definition identifier parameters identifier identifier identifier identifier block expression_statement assignment identifier call identifier argument_list identifier expression_statement assignment identifier call attribute identifier identifier argument_list attribute identifier identifier identifier identifier expression_statement assignment identifier generator_expression call attribute identifier identifier argument_list identifier identifier for_in_clause identifier identifier expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list identifier expression_statement assignment identifier call identifier argument_list identifier expression_statement assignment identifier generator_expression identifier for_in_clause identifier identifier if_clause comparison_operator identifier identifier return_statement call identifier argument_list call identifier argument_list identifier
Filter filenames for package's data files in 'src_dir
def write_config(configfile, content): with open(configfile, 'w+') as ymlfile: yaml.dump( content, ymlfile, default_flow_style=False, )
module function_definition identifier parameters identifier identifier block with_statement with_clause with_item as_pattern call identifier argument_list identifier string string_start string_content string_end as_pattern_target identifier block expression_statement call attribute identifier identifier argument_list identifier identifier keyword_argument identifier false
Write dict to a file in yaml format
def write(self, data): self.backingStream.write(data) for listener in self.writeListeners: listener(len(data))
module function_definition identifier parameters identifier identifier block expression_statement call attribute attribute identifier identifier identifier argument_list identifier for_statement identifier attribute identifier identifier block expression_statement call identifier argument_list call identifier argument_list identifier
Write the given data to the file.
def read_string_from_file(path, encoding="utf8"): with codecs.open(path, "rb", encoding=encoding) as f: value = f.read() return value
module function_definition identifier parameters identifier default_parameter identifier string string_start string_content string_end block with_statement with_clause with_item as_pattern call attribute identifier identifier argument_list identifier string string_start string_content string_end keyword_argument identifier identifier as_pattern_target identifier block expression_statement assignment identifier call attribute identifier identifier argument_list return_statement identifier
Read entire contents of file into a string.