sequence
stringlengths 557
12.7k
| docstring
stringlengths 4
15.2k
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|---|---|
(module
(function_definition
(function_name_relation_completions) function_name_relation_completions
(parameters
(typed_parameter
(identifier_completion_text) identifier_completion_text
(type
(identifier_str) identifier_str
)type
)typed_parameter
(typed_parameter
(identifier_bel_spec) identifier_bel_spec
(type
(identifier_BELSpec) identifier_BELSpec
)type
)typed_parameter
(typed_parameter
(identifier_bel_fmt) identifier_bel_fmt
(type
(identifier_str) identifier_str
)type
)typed_parameter
(typed_parameter
(identifier_size) identifier_size
(type
(identifier_int) identifier_int
)type
)typed_parameter
)parameters
(type
(identifier_list) identifier_list
)type
(block
(if_statement
(comparison_operator
(identifier_bel_fmt) identifier_bel_fmt
(string_"short") string_"short"
)comparison_operator
(block
(expression_statement
(assignment
(identifier_relation_list) identifier_relation_list
(subscript
(subscript
(identifier_bel_spec) identifier_bel_spec
(string_"relations") string_"relations"
)subscript
(string_"list_short") string_"list_short"
)subscript
)assignment
)expression_statement
)block
(else_clause
(block
(expression_statement
(assignment
(identifier_relation_list) identifier_relation_list
(subscript
(subscript
(identifier_bel_spec) identifier_bel_spec
(string_"relations") string_"relations"
)subscript
(string_"list_long") string_"list_long"
)subscript
)assignment
)expression_statement
)block
)else_clause
)if_statement
(expression_statement
(assignment
(identifier_matches) identifier_matches
(list
)list
)assignment
)expression_statement
(for_statement
(identifier_r) identifier_r
(identifier_relation_list) identifier_relation_list
(block
(if_statement
(call
(attribute
(identifier_re) identifier_re
(identifier_match) identifier_match
)attribute
(argument_list
(identifier_completion_text) identifier_completion_text
(identifier_r) identifier_r
)argument_list
)call
(block
(expression_statement
(call
(attribute
(identifier_matches) identifier_matches
(identifier_append) identifier_append
)attribute
(argument_list
(identifier_r) identifier_r
)argument_list
)call
)expression_statement
)block
)if_statement
)block
)for_statement
(expression_statement
(assignment
(identifier_replace_list) identifier_replace_list
(list
)list
)assignment
)expression_statement
(for_statement
(identifier_match) identifier_match
(identifier_matches) identifier_matches
(block
(expression_statement
(assignment
(identifier_highlight) identifier_highlight
(call
(attribute
(identifier_match) identifier_match
(identifier_replace) identifier_replace
)attribute
(argument_list
(identifier_completion_text) identifier_completion_text
(string_f"<em>{completion_text}</em>") string_f"<em>{completion_text}</em>"
)argument_list
)call
)assignment
)expression_statement
(expression_statement
(call
(attribute
(identifier_replace_list) identifier_replace_list
(identifier_append) identifier_append
)attribute
(argument_list
(dictionary
(pair
(string_"replacement") string_"replacement"
(identifier_match) identifier_match
)pair
(pair
(string_"label") string_"label"
(identifier_match) identifier_match
)pair
(pair
(string_"highlight") string_"highlight"
(identifier_highlight) identifier_highlight
)pair
(pair
(string_"type") string_"type"
(string_"Relation") string_"Relation"
)pair
)dictionary
)argument_list
)call
)expression_statement
)block
)for_statement
(return_statement
(subscript
(identifier_replace_list) identifier_replace_list
(slice
(colon) colon
(identifier_size) identifier_size
)slice
)subscript
)return_statement
)block
)function_definition
)module
|
Filter BEL relations by prefix
Args:
prefix: completion string
bel_fmt: short, medium, long BEL formats
spec: BEL specification
Returns:
list: list of BEL relations that match prefix
|
(module
(function_definition
(function_name_msg_debug) function_name_msg_debug
(parameters
(identifier_message) identifier_message
)parameters
(block
(if_statement
(comparison_operator
(identifier__log_lvl) identifier__log_lvl
(attribute
(identifier_logging) identifier_logging
(identifier_DEBUG) identifier_DEBUG
)attribute
)comparison_operator
(block
(expression_statement
(call
(identifier_to_stdout) identifier_to_stdout
(argument_list
(call
(attribute
(string_" (*) {message}") string_" (*) {message}"
(identifier_format) identifier_format
)attribute
(argument_list
(keyword_argument
(identifier_message) identifier_message
(identifier_message) identifier_message
)keyword_argument
)argument_list
)call
(keyword_argument
(identifier_colorf) identifier_colorf
(identifier_cyan) identifier_cyan
)keyword_argument
)argument_list
)call
)expression_statement
(if_statement
(identifier__logger) identifier__logger
(block
(expression_statement
(call
(attribute
(identifier__logger) identifier__logger
(identifier_debug) identifier_debug
)attribute
(argument_list
(identifier_message) identifier_message
)argument_list
)call
)expression_statement
)block
)if_statement
)block
)if_statement
)block
)function_definition
)module
|
Log a debug message
:param message: the message to be logged
|
(module
(function_definition
(function_name_load_session) function_name_load_session
(parameters
(default_parameter
(identifier_fname) identifier_fname
(None) None
)default_parameter
)parameters
(block
(if_statement
(comparison_operator
(identifier_fname) identifier_fname
(None) None
)comparison_operator
(block
(expression_statement
(assignment
(identifier_fname) identifier_fname
(attribute
(identifier_conf) identifier_conf
(identifier_session) identifier_session
)attribute
)assignment
)expression_statement
)block
)if_statement
(try_statement
(block
(expression_statement
(assignment
(identifier_s) identifier_s
(call
(attribute
(attribute
(attribute
(identifier_six) identifier_six
(identifier_moves) identifier_moves
)attribute
(identifier_cPickle) identifier_cPickle
)attribute
(identifier_load) identifier_load
)attribute
(argument_list
(call
(attribute
(identifier_gzip) identifier_gzip
(identifier_open) identifier_open
)attribute
(argument_list
(identifier_fname) identifier_fname
(string_"rb") string_"rb"
)argument_list
)call
)argument_list
)call
)assignment
)expression_statement
)block
(except_clause
(identifier_IOError) identifier_IOError
(block
(try_statement
(block
(expression_statement
(assignment
(identifier_s) identifier_s
(call
(attribute
(attribute
(attribute
(identifier_six) identifier_six
(identifier_moves) identifier_moves
)attribute
(identifier_cPickle) identifier_cPickle
)attribute
(identifier_load) identifier_load
)attribute
(argument_list
(call
(identifier_open) identifier_open
(argument_list
(identifier_fname) identifier_fname
(string_"rb") string_"rb"
)argument_list
)call
)argument_list
)call
)assignment
)expression_statement
)block
(except_clause
(identifier_IOError) identifier_IOError
(block
(raise_statement
)raise_statement
)block
)except_clause
)try_statement
)block
)except_clause
)try_statement
(expression_statement
(assignment
(identifier_scapy_session) identifier_scapy_session
(subscript
(attribute
(attribute
(attribute
(identifier_six) identifier_six
(identifier_moves) identifier_moves
)attribute
(identifier_builtins) identifier_builtins
)attribute
(identifier___dict__) identifier___dict__
)attribute
(string_"scapy_session") string_"scapy_session"
)subscript
)assignment
)expression_statement
(expression_statement
(call
(attribute
(identifier_scapy_session) identifier_scapy_session
(identifier_clear) identifier_clear
)attribute
(argument_list
)argument_list
)call
)expression_statement
(expression_statement
(call
(attribute
(identifier_scapy_session) identifier_scapy_session
(identifier_update) identifier_update
)attribute
(argument_list
(identifier_s) identifier_s
)argument_list
)call
)expression_statement
(expression_statement
(call
(identifier_update_ipython_session) identifier_update_ipython_session
(argument_list
(identifier_scapy_session) identifier_scapy_session
)argument_list
)call
)expression_statement
(expression_statement
(call
(attribute
(identifier_log_loading) identifier_log_loading
(identifier_info) identifier_info
)attribute
(argument_list
(binary_operator
(string_"Loaded session [%s]") string_"Loaded session [%s]"
(identifier_fname) identifier_fname
)binary_operator
)argument_list
)call
)expression_statement
)block
)function_definition
)module
|
Load current Scapy session from the file specified in the fname arg.
This will erase any existing session.
params:
- fname: file to load the scapy session from
|
(module
(function_definition
(function_name__convert_data) function_name__convert_data
(parameters
(identifier_self) identifier_self
(identifier_data) identifier_data
(identifier_data_type) identifier_data_type
(identifier_num_recs) identifier_num_recs
(identifier_num_values) identifier_num_values
(identifier_num_elems) identifier_num_elems
)parameters
(block
(if_statement
(parenthesized_expression
(boolean_operator
(comparison_operator
(identifier_data_type) identifier_data_type
(integer_51) integer_51
)comparison_operator
(comparison_operator
(identifier_data_type) identifier_data_type
(integer_52) integer_52
)comparison_operator
)boolean_operator
)parenthesized_expression
(block
(return_statement
(list_comprehension
(call
(attribute
(subscript
(identifier_data) identifier_data
(slice
(identifier_i) identifier_i
(colon) colon
(binary_operator
(identifier_i) identifier_i
(identifier_num_elems) identifier_num_elems
)binary_operator
)slice
)subscript
(identifier_decode) identifier_decode
)attribute
(argument_list
(string_'utf-8') string_'utf-8'
)argument_list
)call
(for_in_clause
(identifier_i) identifier_i
(call
(identifier_range) identifier_range
(argument_list
(integer_0) integer_0
(binary_operator
(binary_operator
(identifier_num_recs) identifier_num_recs
(identifier_num_values) identifier_num_values
)binary_operator
(identifier_num_elems) identifier_num_elems
)binary_operator
(identifier_num_elems) identifier_num_elems
)argument_list
)call
)for_in_clause
)list_comprehension
)return_statement
)block
(else_clause
(block
(expression_statement
(assignment
(identifier_tofrom) identifier_tofrom
(call
(attribute
(identifier_self) identifier_self
(identifier__convert_option) identifier__convert_option
)attribute
(argument_list
)argument_list
)call
)assignment
)expression_statement
(expression_statement
(assignment
(identifier_dt_string) identifier_dt_string
(call
(attribute
(identifier_self) identifier_self
(identifier__convert_type) identifier__convert_type
)attribute
(argument_list
(identifier_data_type) identifier_data_type
)argument_list
)call
)assignment
)expression_statement
(expression_statement
(assignment
(identifier_form) identifier_form
(binary_operator
(binary_operator
(identifier_tofrom) identifier_tofrom
(call
(identifier_str) identifier_str
(argument_list
(binary_operator
(binary_operator
(identifier_num_recs) identifier_num_recs
(identifier_num_values) identifier_num_values
)binary_operator
(identifier_num_elems) identifier_num_elems
)binary_operator
)argument_list
)call
)binary_operator
(identifier_dt_string) identifier_dt_string
)binary_operator
)assignment
)expression_statement
(expression_statement
(assignment
(identifier_value_len) identifier_value_len
(call
(attribute
(identifier_CDF) identifier_CDF
(identifier__type_size) identifier__type_size
)attribute
(argument_list
(identifier_data_type) identifier_data_type
(identifier_num_elems) identifier_num_elems
)argument_list
)call
)assignment
)expression_statement
(return_statement
(call
(identifier_list) identifier_list
(argument_list
(call
(attribute
(identifier_struct) identifier_struct
(identifier_unpack_from) identifier_unpack_from
)attribute
(argument_list
(identifier_form) identifier_form
(subscript
(identifier_data) identifier_data
(slice
(integer_0) integer_0
(colon) colon
(binary_operator
(binary_operator
(identifier_num_recs) identifier_num_recs
(identifier_num_values) identifier_num_values
)binary_operator
(identifier_value_len) identifier_value_len
)binary_operator
)slice
)subscript
)argument_list
)call
)argument_list
)call
)return_statement
)block
)else_clause
)if_statement
)block
)function_definition
)module
|
Converts data to the appropriate type using the struct.unpack method,
rather than using numpy.
|
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