file_name
stringlengths 12
12
| question
stringclasses 621
values | answer
stringlengths 4
163
|
---|---|---|
TCGA-E9-A1RB | What histology annotations were found in the breast cancer sample? | Invasive carcinoma with medullary features |
TCGA-E9-A1RB | What is the PAM50 and Claudin-low molecular subtype of the breast cancer? | LumB |
TCGA-E9-A1RB | What is the percentage of epithelial area in the breast cancer sample? | 25-75% (Moderate) |
TCGA-E9-A1RB | Is inflammation present in the breast cancer sample? | Yes, inflammation is present |
TCGA-E9-A1RB | Is LCIS (Lobular Carcinoma In Situ) present in the breast cancer sample? | No, LCIS is absent |
TCGA-E9-A1RB | Are apocrine features present in the breast cancer sample? | No, apocrine features are absent |
TCGA-E9-A1RB | Is DCIS (Ductal Carcinoma In Situ) present in the breast cancer sample? | Yes, DCIS is present |
TCGA-E9-A1RB | What is the score for epithelial tubule formation in the breast cancer sample? | (score = 3) <10% |
TCGA-E9-A1RB | Is lymphovascular invasion (LVI) present in the breast cancer sample? | No, lymphovascular invasion (LVI) is absent |
TCGA-E9-A1RB | Is necrosis present in the breast cancer sample? | Yes, necrosis is present |
TCGA-E9-A1RB | What is the description of nuclear pleomorphism in the breast cancer sample? | (score = 3) Marked variation in size, prominent nucleoli, chromatin clumping |
TCGA-E9-A1RB | What is the nature of fibrous focus in the breast cancer sample? | Multiple fibrotic foci |
TCGA-E9-A1RB | What is the score for mitosis in the breast cancer sample? | (score = 3) >10 per 10 HPF |
TCGA-E9-A3QA | What is the histology annotation for the breast cancer? | Invasive carcinoma with medullary features |
TCGA-E9-A3QA | What is the PAM50 and Claudin-low molecular subtype of the breast cancer? | Basal |
TCGA-E9-A3QA | What is the percentage of epithelial area in the breast cancer? | 25-75% (Moderate) |
TCGA-E9-A3QA | Is inflammation present in the breast cancer? | Yes, inflammation is present |
TCGA-E9-A3QA | Is LCIS present in the breast cancer? | No, LCIS is absent |
TCGA-E9-A3QA | Are apocrine features present in the breast cancer? | No, apocrine features are absent |
TCGA-E9-A3QA | Is DCIS present in the breast cancer? | Yes, DCIS is present |
TCGA-E9-A3QA | What is the score for epithelial tubule formation in the breast cancer? | (score = 3) <10% |
TCGA-E9-A3QA | Is lymphovascular invasion (LVI) present in the breast cancer? | No, LVI is absent |
TCGA-E9-A3QA | Is necrosis present in the breast cancer? | Yes, necrosis is present |
TCGA-E9-A3QA | What is the description of nuclear pleomorphism in the breast cancer? | (score = 3) Marked variation in size, prominent nucleoli, chromatin clumping |
TCGA-E9-A3QA | Is fibrous focus present in the breast cancer? | No, fibrous focus is absent |
TCGA-E9-A3QA | What is the score for mitosis in the breast cancer? | (score = 3) >10 per 10 HPF |
TCGA-EW-A1P4 | What are the histology annotations for the breast cancer? | Invasive carcinoma with medullary features. |
TCGA-EW-A1P4 | What is the PAM50 and Claudin-low molecular subtype of the breast cancer? | Basal. |
TCGA-EW-A1P4 | What is the percentage of epithelial area in the breast cancer? | 25-75% (Moderate). |
TCGA-EW-A1P4 | Is inflammation present in the breast cancer? | Yes, inflammation is present. |
TCGA-EW-A1P4 | Is LCIS present in the breast cancer? | No, LCIS is absent. |
TCGA-EW-A1P4 | Are there any apocrine features in the breast cancer? | No, apocrine features are absent. |
TCGA-EW-A1P4 | Is DCIS present in the breast cancer? | No, DCIS is absent. |
TCGA-EW-A1P4 | What is the percentage of epithelial tubule formation in the breast cancer? | (score = 3) <10%. |
TCGA-EW-A1P4 | Is lymphovascular invasion present in the breast cancer? | No, lymphovascular invasion is absent. |
TCGA-EW-A1P4 | Is necrosis present in the breast cancer? | No, necrosis is absent. |
TCGA-EW-A1P4 | What is the nuclear pleomorphism score in the breast cancer? | (score = 3) Marked variation in size, prominent nucleoli, chromatin clumping. |
TCGA-EW-A1P4 | Is there a fibrous focus in the breast cancer? | No, fibrous focus is absent. |
TCGA-EW-A1P4 | What is the mitosis score in the breast cancer? | (score = 3) >10 per 10 HPF. |
TCGA-AO-A03M | What are the histology annotations for the breast cancer? | Invasive carcinoma with medullary features |
TCGA-AO-A03M | What is the PAM50 and Claudin-low molecular subtype of the breast cancer? | LumA |
TCGA-AO-A03M | What is the percentage of epithelial area in the breast cancer? | >75% (High) |
TCGA-AO-A03M | Is inflammation present in the breast cancer? | Yes, inflammation is present |
TCGA-AO-A03M | Is LCIS present in the breast cancer? | No, LCIS is absent |
TCGA-AO-A03M | Are there any apocrine features in the breast cancer? | No, apocrine features are absent |
TCGA-AO-A03M | Is DCIS present in the breast cancer? | No, DCIS is absent |
TCGA-AO-A03M | What is the score for epithelial tubule formation in the breast cancer? | (score = 3) <10% |
TCGA-AO-A03M | Is there lymphovascular invasion (LVI) in the breast cancer? | No, LVI is absent |
TCGA-AO-A03M | Is necrosis present in the breast cancer? | No, necrosis is absent |
TCGA-AO-A03M | What is the description of nuclear pleomorphism in the breast cancer? | (score = 3) Marked variation in size, prominent nucleoli, chromatin clumping |
TCGA-AO-A03M | Is there a fibrous focus in the breast cancer? | No, fibrous focus is absent |
TCGA-AO-A03M | What is the score for mitosis in the breast cancer? | (score = 3) >10 per 10 HPF |
TCGA-AO-A03O | What is the PAM50 and Claudin-low molecular subtype of the breast cancer? | The PAM50 and Claudin-low molecular subtype of the breast cancer is LumB. |
TCGA-AO-A03O | What is the percentage of epithelial area in the breast cancer? | The percentage of epithelial area in the breast cancer is greater than 75% (High). |
TCGA-AO-A03O | Is inflammation present in the breast cancer? | Yes, inflammation is present in the breast cancer. |
TCGA-AO-A03O | Is LCIS present in the breast cancer? | No, LCIS is absent in the breast cancer. |
TCGA-AO-A03O | Are apocrine features present in the breast cancer? | No, apocrine features are absent in the breast cancer. |
TCGA-AO-A03O | Is DCIS present in the breast cancer? | No, DCIS is absent in the breast cancer. |
TCGA-AO-A03O | What is the score for epithelial tubule formation in the breast cancer? | The score for epithelial tubule formation in the breast cancer is 3, with less than 10% tubule formation. |
TCGA-AO-A03O | Is lymphovascular invasion present in the breast cancer? | No, lymphovascular invasion is absent in the breast cancer. |
TCGA-AO-A03O | Is necrosis present in the breast cancer? | Yes, necrosis is present in the breast cancer. |
TCGA-AO-A03O | What is the nuclear pleomorphism like in the breast cancer? | The nuclear pleomorphism in the breast cancer is marked variation in size, prominent nucleoli, and chromatin clumping with a score of 3. |
TCGA-AO-A03O | Is fibrous focus present in the breast cancer? | No, fibrous focus is absent in the breast cancer. |
TCGA-AO-A03O | What is the mitotic rate in the breast cancer? | The mitotic rate in the breast cancer is scored as 3, with more than 10 mitoses per 10 high-power fields. |
TCGA-AO-A03R | What is the PAM50 and Claudin-low molecular subtype of the breast cancer? | The PAM50 and Claudin-low molecular subtype of the breast cancer is normal-like. |
TCGA-AO-A03R | What is the percentage of epithelial area in the breast cancer? | The percentage of epithelial area in the breast cancer is greater than 75% (High). |
TCGA-AO-A03R | Is inflammation present in the breast cancer? | Yes, inflammation is present in the breast cancer. |
TCGA-AO-A03R | Is LCIS (Lobular Carcinoma In Situ) present in the breast cancer? | No, LCIS is absent in the breast cancer. |
TCGA-AO-A03R | Are there any apocrine features present in the breast cancer? | No, apocrine features are absent in the breast cancer. |
TCGA-AO-A03R | Is DCIS (Ductal Carcinoma In Situ) present in the breast cancer? | No, DCIS is absent in the breast cancer. |
TCGA-AO-A03R | What is the score for epithelial tubule formation in the breast cancer? | The score for epithelial tubule formation in the breast cancer is 3, with less than 10% tubule formation. |
TCGA-AO-A03R | Is lymphovascular invasion (LVI) present in the breast cancer? | Yes, lymphovascular invasion (LVI) is present in the breast cancer. |
TCGA-AO-A03R | Is necrosis present in the breast cancer? | No, necrosis is absent in the breast cancer. |
TCGA-AO-A03R | What is the description of nuclear pleomorphism in the breast cancer? | The nuclear pleomorphism in the breast cancer is scored as 3, indicating marked variation in size, prominent nucleoli, and chromatin clumping. |
TCGA-AO-A03R | Are there any fibrous foci present in the breast cancer? | No, fibrous foci are absent in the breast cancer. |
TCGA-AO-A03R | What is the score for mitosis in the breast cancer? | The score for mitosis in the breast cancer is 3, with more than 10 mitotic figures per 10 high-power fields (HPF). |
TCGA-AR-A24H | What is the PAM50 and Claudin-low molecular subtype of the breast cancer? | The PAM50 and Claudin-low molecular subtype of the breast cancer is LumB. |
TCGA-AR-A24H | What is the percentage of epithelial area in the breast cancer? | The epithelial area in the breast cancer is greater than 75%, which is classified as high. |
TCGA-AR-A24H | Is inflammation present in the breast cancer? | No, inflammation is absent in the breast cancer. |
TCGA-AR-A24H | Is LCIS (Lobular Carcinoma In Situ) present in the breast cancer? | No, LCIS is absent in the breast cancer. |
TCGA-AR-A24H | Are apocrine features observed in the breast cancer? | No, apocrine features are absent in the breast cancer. |
TCGA-AR-A24H | Is DCIS (Ductal Carcinoma In Situ) present in the breast cancer? | No, DCIS is absent in the breast cancer. |
TCGA-AR-A24H | What is the score and percentage of epithelial tubule formation in the breast cancer? | The score for epithelial tubule formation is 3, with less than 10% tubule formation. |
TCGA-AR-A24H | Is lymphovascular invasion (LVI) present in the breast cancer? | No, lymphovascular invasion (LVI) is absent in the breast cancer. |
TCGA-AR-A24H | Is necrosis observed in the breast cancer? | No, necrosis is absent in the breast cancer. |
TCGA-AR-A24H | What is the nuclear pleomorphism score and description in the breast cancer? | The nuclear pleomorphism score is 3, indicating marked variation in size, prominent nucleoli, and chromatin clumping. |
TCGA-AR-A24H | Is fibrous focus present in the breast cancer? | No, fibrous focus is absent in the breast cancer. |
TCGA-AR-A24H | What is the mitosis score and count in the breast cancer? | The mitosis score is 2, with 6 to 10 mitotic figures per 10 high-power fields (HPF). |
TCGA-A1-A0SD | What is the PAM50 and Claudin-low molecular subtype of the breast cancer? | The PAM50 and Claudin-low molecular subtype of the breast cancer is LumA. |
TCGA-A1-A0SD | What is the percentage of epithelial area in the breast cancer? | The percentage of epithelial area in the breast cancer is 25-75% (Moderate). |
TCGA-A1-A0SD | Is inflammation present in the breast cancer? | No, inflammation is absent in the breast cancer. |
TCGA-A1-A0SD | Is LCIS (Lobular Carcinoma In Situ) present in the breast cancer? | No, LCIS is absent in the breast cancer. |
TCGA-A1-A0SD | What is the percentage of apocrine features in the breast cancer? | The percentage of apocrine features in the breast cancer is greater than 50% (Marked). |
TCGA-A1-A0SD | Is DCIS (Ductal Carcinoma In Situ) present in the breast cancer? | Yes, DCIS is present in the breast cancer. |
TCGA-A1-A0SD | What is the range of epithelial tubule formation in the breast cancer? | The range of epithelial tubule formation in the breast cancer is 10% to 75% with a score of 2. |
TCGA-A1-A0SD | Is lymphovascular invasion present in the breast cancer? | No, lymphovascular invasion (LVI) is absent in the breast cancer. |
TCGA-A1-A0SD | Is necrosis present in the breast cancer? | Yes, necrosis is present in the breast cancer. |
TCGA-A1-A0SD | What is the nuclear pleomorphism score in the breast cancer? | The nuclear pleomorphism score in the breast cancer is 3, indicating marked variation in size, prominent nucleoli, and chromatin clumping. |
TCGA-A1-A0SD | What type of fibrous focus is observed in the breast cancer? | Multiple fibrotic foci are observed in the breast cancer. |
TCGA-A1-A0SD | What is the mitotic score in the breast cancer? | The mitotic score in the breast cancer is 2, indicating 6 to 10 mitoses per 10 high-power fields (HPF). |