Module ImportFrom alias alias ImportFrom alias alias ImportFrom alias ImportFrom alias ImportFrom alias ImportFrom alias ImportFrom alias ImportFrom alias ImportFrom alias ClassDef bases NameLoad AttributeLoad NameLoad attr body Assign NameStore Str Assign NameStore Num Assign NameStore Str FunctionDef arguments args NameParam NameParam defaults NameLoad body Expr Call AttributeLoad NameLoad attr NameLoad NameLoad Expr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad NameLoad Expr Call AttributeLoad NameLoad attr Expr Call AttributeLoad NameLoad attr decorator_list FunctionDef arguments args NameParam defaults body If CompareIs AttributeLoad AttributeLoad NameLoad attr attr NameLoad body Return Assign NameStore Call AttributeLoad SubscriptLoad AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr Index AttributeLoad AttributeLoad NameLoad attr attr attr If CompareEq Call NameLoad NameLoad Num body Assign NameStore SubscriptLoad AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr Index Str If CompareIsNot NameLoad NameLoad body Expr Call AttributeLoad NameLoad attr Call AttributeLoad NameLoad attr Assign AttributeStore AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr attr AttributeLoad AttributeLoad NameLoad attr attr Assign NameStore Call NameLoad AttributeLoad AttributeLoad NameLoad attr attr AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr Expr Call AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr NameLoad Assign AttributeStore NameLoad attr Call NameLoad AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr AttributeLoad AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr attr AttributeLoad AttributeLoad NameLoad attr attr Expr Call AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr AttributeLoad NameLoad attr Assign NameStore Call NameLoad AttributeLoad NameLoad attr AttributeLoad AttributeLoad AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr attr attr keyword Num keyword Num keyword NameLoad keyword NameLoad keyword NameLoad Assign SubscriptStore AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr Index Str NameLoad Assign NameStore SubscriptLoad AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr Index Str Expr Call AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr AttributeLoad NameLoad attr decorator_list FunctionDef arguments args NameParam defaults body If CompareIs AttributeLoad AttributeLoad NameLoad attr attr NameLoad body Return Assign AttributeStore AttributeLoad AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr attr attr AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr If CompareIsNot AttributeLoad AttributeLoad AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr attr attr NameLoad body Assign AttributeStore AttributeLoad AttributeLoad NameLoad attr attr attr AttributeLoad AttributeLoad AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr attr attr decorator_list FunctionDef arguments args NameParam defaults body Assign NameStore Call AttributeLoad NameLoad attr Expr Call AttributeLoad NameLoad attr Num Assign AttributeStore NameLoad attr Call NameLoad Str AttributeLoad NameLoad attr Assign AttributeStore NameLoad attr Call NameLoad Str AttributeLoad NameLoad attr Assign AttributeStore NameLoad attr Call NameLoad Str AttributeLoad NameLoad attr Assign AttributeStore NameLoad attr Call NameLoad Str AttributeLoad NameLoad attr Expr Call AttributeLoad AttributeLoad NameLoad attr attr Str Expr Call AttributeLoad AttributeLoad NameLoad attr attr Str Expr Call AttributeLoad AttributeLoad NameLoad attr attr Str Expr Call AttributeLoad AttributeLoad NameLoad attr attr Str Expr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad Expr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad Expr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad Expr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad Expr Call AttributeLoad NameLoad attr AttributeLoad NameLoad attr Expr Call AttributeLoad NameLoad attr AttributeLoad NameLoad attr Expr Call AttributeLoad NameLoad attr AttributeLoad NameLoad attr Expr Call AttributeLoad NameLoad attr Expr Call AttributeLoad NameLoad attr AttributeLoad NameLoad attr Expr Call AttributeLoad NameLoad attr NameLoad decorator_list FunctionDef arguments args NameParam defaults body Expr Call AttributeLoad NameLoad attr AttributeLoad NameLoad attr Call AttributeLoad NameLoad attr Str AttributeLoad NameLoad attr Expr Call AttributeLoad NameLoad attr AttributeLoad NameLoad attr Call AttributeLoad NameLoad attr Str AttributeLoad NameLoad attr Expr Call AttributeLoad NameLoad attr AttributeLoad NameLoad attr Call AttributeLoad NameLoad attr Str AttributeLoad NameLoad attr Expr Call AttributeLoad NameLoad attr AttributeLoad NameLoad attr Call AttributeLoad NameLoad attr Str AttributeLoad NameLoad attr decorator_list FunctionDef arguments args NameParam defaults body Assign NameStore Call NameLoad AttributeLoad NameLoad attr keyword NameLoad Assign NameStore Call AttributeLoad NameLoad attr If CompareGt Call NameLoad NameLoad Num body Assign NameStore Call AttributeLoad SubscriptLoad NameLoad Index Num attr Expr Call AttributeLoad NameLoad attr Num Assign AttributeStore NameLoad attr SubscriptLoad NameLoad Index Num Expr Call AttributeLoad AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr attr NameLoad Expr Call AttributeLoad AttributeLoad SubscriptLoad AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr Index AttributeLoad AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr attr attr attr AttributeLoad SubscriptLoad NameLoad Index Num attr Expr Call AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr Expr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad Expr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad decorator_list FunctionDef arguments args NameParam defaults body Assign AttributeStore NameLoad attr Call NameLoad AttributeLoad NameLoad attr Expr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad decorator_list FunctionDef arguments args NameParam defaults body Assign AttributeStore NameLoad attr Call NameLoad AttributeLoad NameLoad attr Expr Call AttributeLoad AttributeLoad NameLoad attr attr AttributeLoad AttributeLoad SubscriptLoad AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr Index AttributeLoad AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr attr attr attr Expr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad decorator_list FunctionDef arguments args NameParam defaults body Assign NameStore SubscriptLoad SubscriptLoad AttributeLoad AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr attr Index Str Index Str Assign NameStore ListLoad For TupleStore NameStore NameStore Call NameLoad NameLoad body Assign NameStore BinOpAdd BinOpAdd Call NameLoad NameLoad Str AttributeLoad NameLoad attr Expr Call AttributeLoad NameLoad attr NameLoad Assign NameStore Call NameLoad AttributeLoad NameLoad attr NameLoad Assign TupleStore NameStore NameStore NameStore Call AttributeLoad NameLoad attr Print NameLoad NameLoad NameLoad Expr Call AttributeLoad AttributeLoad AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr attr attr AttributeLoad NameLoad attr NameLoad NameLoad NameLoad Expr Call AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr decorator_list decorator_list
N/A ilastik.gui.ribbons.ilastikTabBase IlastikTabBase TabButton PyQt4 QtGui QtCore ilastik.gui.iconMgr ilastikIcons ilastik.gui.overlaySelectionDlg OverlaySelectionDialog ilastik.gui.overlayWidget OverlayWidget ilastik.modules.connected_components.core.connectedComponentsMgr BackgroundOverlayItem backgroundWidget BackgroundWidget guiThread CC labelSelectionForm LabelSelectionForm ConnectedComponentsTab N/A IlastikTabBase N/A QtGui QWidget N/A N/A name Connected Components N/A position 2 N/A moduleName Connected_Components __init__ N/A N/A self parent N/A None N/A N/A N/A N/A IlastikTabBase __init__ self parent N/A N/A N/A N/A QtGui QWidget __init__ self parent N/A N/A N/A self _initContent N/A N/A N/A self _initConnects N/A on_activation N/A N/A self N/A N/A N/A N/A N/A N/A self ilastik project None N/A N/A N/A ovs N/A N/A N/A N/A N/A N/A self ilastik _activeImage module N/A N/A N/A self __class__ moduleName getOverlayRefs N/A N/A N/A len ovs 0 N/A N/A raw N/A N/A N/A N/A self ilastik _activeImage overlayMgr N/A Raw Data N/A N/A raw None N/A N/A N/A N/A ovs append N/A N/A raw getRef N/A N/A N/A N/A N/A self ilastik labelWidget _history volumeEditor N/A N/A self ilastik labelWidget N/A overlayWidget N/A OverlayWidget N/A N/A self ilastik labelWidget N/A N/A N/A self ilastik project dataMgr N/A N/A N/A N/A N/A self ilastik labelWidget setOverlayWidget overlayWidget N/A N/A self backgroundLabels N/A BackgroundWidget N/A N/A N/A self ilastik _activeImage Connected_Components N/A N/A N/A N/A self ilastik _activeImage Connected_Components background N/A N/A self ilastik labelWidget N/A N/A N/A N/A N/A self ilastik labelWidget setLabelWidget N/A self backgroundLabels N/A ov N/A BackgroundOverlayItem N/A self backgroundLabels N/A N/A N/A N/A N/A self ilastik _activeImage Connected_Components background _data color 0 alpha 1.0 autoAdd True autoVisible True linkColorTable True N/A N/A N/A N/A N/A self ilastik _activeImage overlayMgr N/A Connected Components/Background ov N/A ov N/A N/A N/A N/A self ilastik _activeImage overlayMgr N/A Connected Components/Background N/A N/A N/A N/A N/A self ilastik labelWidget setLabelWidget N/A self backgroundLabels N/A on_deActivation N/A N/A self N/A N/A N/A N/A N/A N/A self ilastik project None N/A N/A N/A N/A N/A N/A N/A N/A self ilastik _activeImage Connected_Components background _history N/A N/A N/A self ilastik labelWidget _history N/A N/A N/A N/A N/A N/A N/A self ilastik _activeImage Connected_Components background _history None N/A N/A N/A N/A N/A self ilastik labelWidget _history N/A N/A N/A N/A N/A self ilastik _activeImage Connected_Components background _history N/A _initContent N/A N/A self N/A N/A N/A tl N/A N/A QtGui QHBoxLayout N/A N/A N/A tl setMargin 0 N/A N/A self btnInputOverlay N/A TabButton Select Overlay N/A ilastikIcons Select N/A N/A self btnCC N/A TabButton CC N/A ilastikIcons System N/A N/A self btnCCBack N/A TabButton CC with background N/A ilastikIcons System N/A N/A self btnFilter N/A TabButton Filter synapses N/A ilastikIcons System N/A N/A N/A N/A self btnInputOverlay setToolTip Select an overlay for connected components search N/A N/A N/A N/A self btnCC setToolTip Run connected components on the selected overlay N/A N/A N/A N/A self btnCCBack setToolTip Run connected components with background N/A N/A N/A N/A self btnFilter setToolTip Perform synapse filtering and dilation N/A N/A N/A N/A self btnInputOverlay setEnabled True N/A N/A N/A N/A self btnCC setEnabled False N/A N/A N/A N/A self btnCCBack setEnabled False N/A N/A N/A N/A self btnFilter setEnabled True N/A N/A N/A tl addWidget N/A self btnInputOverlay N/A N/A N/A tl addWidget N/A self btnCC N/A N/A N/A tl addWidget N/A self btnCCBack N/A N/A N/A tl addStretch N/A N/A N/A tl addWidget N/A self btnFilter N/A N/A N/A self setLayout tl N/A _initConnects N/A N/A self N/A N/A N/A N/A N/A self connect N/A self btnInputOverlay N/A N/A QtCore SIGNAL clicked() N/A self on_btnInputOverlay_clicked N/A N/A N/A self connect N/A self btnCC N/A N/A QtCore SIGNAL clicked() N/A self on_btnCC_clicked N/A N/A N/A self connect N/A self btnCCBack N/A N/A QtCore SIGNAL clicked() N/A self on_btnCCBack_clicked N/A N/A N/A self connect N/A self btnFilter N/A N/A QtCore SIGNAL clicked() N/A self on_btnFilter_clicked N/A on_btnInputOverlay_clicked N/A N/A self N/A N/A N/A dlg N/A OverlaySelectionDialog N/A self ilastik singleSelection True N/A answer N/A N/A dlg exec_ N/A N/A N/A len answer 0 N/A N/A ref N/A N/A N/A answer N/A 0 getRef N/A N/A N/A ref setAlpha 0.4 N/A N/A self inputOverlay N/A answer N/A 0 N/A N/A N/A N/A N/A N/A self parent labelWidget overlayWidget addOverlayRef ref N/A N/A N/A N/A N/A N/A N/A N/A self parent project dataMgr N/A N/A N/A N/A N/A self parent project dataMgr _activeImageNumber Connected_Components setInputData N/A N/A answer N/A 0 _data N/A N/A N/A N/A N/A self parent labelWidget repaint N/A N/A N/A N/A self btnCC setEnabled True N/A N/A N/A N/A self btnCCBack setEnabled True N/A on_btnCC_clicked N/A N/A self N/A N/A N/A N/A self connComp N/A CC N/A self ilastik N/A N/A N/A N/A self connComp start None N/A on_btnCCBack_clicked N/A N/A self N/A N/A N/A N/A self connComp N/A CC N/A self ilastik N/A N/A N/A N/A self connComp start N/A N/A N/A N/A N/A N/A self parent project dataMgr N/A N/A N/A N/A N/A self parent project dataMgr _activeImageNumber Connected_Components connCompBackgroundClasses N/A N/A N/A N/A self btnFilter setEnabled True N/A on_btnFilter_clicked N/A N/A self N/A N/A N/A descriptions N/A N/A N/A N/A N/A N/A self parent project dataMgr module N/A Classification N/A labelDescriptions N/A desc_names N/A N/A N/A i d N/A enumerate descriptions N/A N/A tempstr N/A N/A N/A str i N/A d name N/A N/A N/A desc_names append tempstr N/A dlg N/A LabelSelectionForm N/A self ilastik desc_names N/A N/A label minsize maxsize N/A N/A dlg exec_ N/A label minsize maxsize N/A N/A N/A N/A N/A N/A N/A self parent project dataMgr Connected_Components filterSynapses N/A self inputOverlay label minsize maxsize N/A N/A N/A N/A N/A self ilastik labelWidget repaint N/A N/A