Module ImportFrom alias ImportFrom alias alias ImportFrom alias ImportFrom alias ClassDef bases NameLoad body FunctionDef arguments args NameParam NameParam defaults body If CompareEq Call NameLoad NameLoad NameLoad body Assign NameStore Call NameLoad NameLoad Assign AttributeStore NameLoad attr NameLoad decorator_list FunctionDef arguments args NameParam NameParam NameParam defaults body Assign NameStore BinOpMod Str Call AttributeLoad NameLoad attr NameLoad AttributeLoad NameLoad attr Assign NameStore Call AttributeLoad Call NameLoad NameLoad attr NameLoad Assign NameStore CompareIsNot NameLoad NameLoad If NameLoad body For NameStore Call AttributeLoad NameLoad attr body If BoolOpAnd UnaryOpNot Call NameLoad NameLoad Call NameLoad AttributeLoad NameLoad attr Str UnaryOpNot Call NameLoad NameLoad Call NameLoad AttributeLoad NameLoad attr Str body Assign NameStore NameLoad Break Return NameLoad decorator_list FunctionDef arguments args NameParam NameParam NameParam NameParam defaults Str body Assign NameStore Call AttributeLoad NameLoad attr Str NameLoad If CompareEq NameLoad Str body Assign NameStore Str orelse If CompareEq NameLoad Str body Assign NameStore Str orelse Assign NameStore Call NameLoad NameLoad Return Call AttributeLoad NameLoad attr ListComp Call AttributeLoad NameLoad attr NameLoad NameLoad NameLoad comprehension NameStore Call NameLoad NameLoad decorator_list FunctionDef arguments args NameParam NameParam NameParam NameParam defaults body Assign NameStore AttributeLoad NameLoad attr Assign NameStore BinOpMod Str NameLoad TryExcept body Assign NameStore Call NameLoad NameLoad NameLoad handlers ExceptHandler type NameLoad body Raise Call NameLoad BinOpMod Str NameLoad Assign NameStore Call NameLoad NameLoad NameLoad If Call AttributeLoad NameLoad attr Call AttributeLoad NameLoad attr Str Str body Assign NameStore BinOpMod Str NameLoad If Call AttributeLoad NameLoad attr Call AttributeLoad NameLoad attr Str Str body Assign NameStore BinOpMod Str NameLoad Assign NameStore Call NameLoad Call AttributeLoad NameLoad attr Str Str Assign NameStore Call NameLoad Call AttributeLoad NameLoad attr Str Str Assert CompareGt NameLoad Num If BoolOpOr CompareNotEq NameLoad Num CompareNotEq NameLoad Num body Assign NameStore BinOpMod Str NameLoad Assign NameStore BinOpMod Str TupleLoad NameLoad IfExp CompareEq NameLoad Num Str Str Assign NameStore BinOpMod Str TupleLoad NameLoad NameLoad Call NameLoad BinOpSub NameLoad Num Num BinOpSub NameLoad Num Assign NameStore BinOpMod Str TupleLoad NameLoad NameLoad Return NameLoad decorator_list FunctionDef arguments args NameParam NameParam defaults body Return BoolOpAnd NameLoad CompareEq Call AttributeLoad NameLoad attr Str decorator_list FunctionDef arguments args NameParam NameParam NameParam defaults body Return Call NameLoad Call AttributeLoad NameLoad attr NameLoad decorator_list FunctionDef arguments args NameParam NameParam NameParam defaults body Return Call AttributeLoad NameLoad attr NameLoad decorator_list FunctionDef arguments args NameParam NameParam NameParam defaults body Assign NameStore Call AttributeLoad NameLoad attr Str Assign NameStore Call AttributeLoad NameLoad attr NameLoad NameLoad Return BinOpMod Str TupleLoad NameLoad NameLoad decorator_list FunctionDef arguments args NameParam NameParam NameParam defaults body Return Str decorator_list FunctionDef arguments args NameParam NameParam NameParam defaults body Return Str decorator_list FunctionDef arguments args NameParam NameParam NameParam defaults body Assign NameStore Call AttributeLoad NameLoad attr NameLoad Str If UnaryOpNot NameLoad body Raise Call NameLoad Str Assign NameStore Call NameLoad AttributeLoad NameLoad attr Str NameLoad Return Call NameLoad NameLoad decorator_list FunctionDef arguments args NameParam NameParam NameParam defaults body Assign NameStore Call AttributeLoad NameLoad attr NameLoad Str Assign NameStore Call NameLoad AttributeLoad NameLoad attr Str NameLoad Return Call NameLoad NameLoad decorator_list FunctionDef arguments args NameParam NameParam NameParam defaults body Return BinOpMod Str Call NameLoad Call NameLoad AttributeLoad NameLoad attr Str decorator_list FunctionDef arguments args NameParam NameParam NameParam defaults body Assign NameStore Call AttributeLoad NameLoad attr Str NameLoad Assign NameStore BinOpMod Str Call NameLoad Call NameLoad AttributeLoad NameLoad attr Str If NameLoad body Assign NameStore BinOpMod Str Call NameLoad Call NameLoad AttributeLoad NameLoad attr Str NameLoad Return NameLoad decorator_list FunctionDef arguments args NameParam NameParam NameParam defaults body Return Call AttributeLoad NameLoad attr NameLoad NameLoad keyword Str decorator_list FunctionDef arguments args NameParam NameParam NameParam defaults Str body Assign NameStore Call AttributeLoad NameLoad attr NameLoad NameLoad If CompareIs NameLoad NameLoad body Assign NameStore AttributeLoad NameLoad attr Return NameLoad decorator_list decorator_list
N/A xml.etree.ElementTree fromstring re escape compile os.path join galaxy.util in_directory ExpressionValidator N/A object N/A __init__ N/A N/A self xml_el N/A N/A N/A N/A N/A type xml_el str N/A N/A xml_el N/A fromstring xml_el N/A N/A self xml_el xml_el N/A validate N/A N/A self job_directory string N/A N/A N/A regex N/A ^%s$ N/A N/A self _expression_to_regex job_directory N/A self xml_el N/A match N/A N/A N/A compile regex match string N/A validated N/A match None N/A validated N/A N/A group N/A N/A match groups N/A N/A N/A N/A N/A in_directory group N/A join N/A job_directory path inputs N/A N/A in_directory group N/A join N/A job_directory path outputs N/A N/A validated False N/A N/A validated N/A _expression_to_regex N/A N/A self job_directory element default_sep N/A *spaces* N/A N/A sep N/A N/A element get separate_by default_sep N/A N/A sep *spaces* N/A N/A join_on  + N/A N/A N/A sep *whitespace* N/A N/A join_on \s+ N/A N/A join_on N/A escape sep N/A N/A N/A join_on join N/A N/A N/A self _element_to_regex child job_directory join_on N/A child N/A list element N/A _element_to_regex N/A N/A self element job_directory join_on N/A N/A N/A tag N/A element tag N/A method_name N/A _%s_to_regex tag N/A N/A N/A method N/A getattr self method_name N/A N/A N/A NameError N/A N/A N/A NameError N/A Unknown XML validation tag [%s] tag N/A regex N/A method element job_directory N/A N/A N/A self __is_true N/A N/A element get single_quote false N/A N/A regex N/A '%s' regex N/A N/A N/A self __is_true N/A N/A element get double_quote false N/A N/A regex N/A "%s" regex N/A min_count N/A int N/A N/A element get min 1 N/A max_count N/A int N/A N/A element get max 1 N/A N/A max_count 0 N/A N/A N/A min_count 1 N/A max_count 1 N/A N/A single_regex N/A (?:%s) regex N/A first N/A %s%s N/A single_regex N/A N/A min_count 0 ? N/A rest N/A (?:%s%s){%d,%d} N/A join_on regex N/A max N/A min_count 1 0 N/A max_count 1 N/A regex N/A %s%s N/A first rest N/A regex N/A __is_true N/A N/A self str N/A N/A N/A N/A str N/A N/A N/A str lower true N/A _literal_to_regex N/A N/A self element job_directory N/A N/A N/A N/A escape N/A N/A self __value_or_text element N/A _regex_to_regex N/A N/A self element job_directory N/A N/A N/A N/A N/A self __value_or_text element N/A _parameter_to_regex N/A N/A self element job_directory N/A N/A N/A parameter_name N/A N/A element get name N/A value_regex N/A N/A self _expression_to_regex job_directory element N/A N/A %s(?:=|\s+)%s N/A parameter_name value_regex N/A _integer_to_regex N/A N/A self element job_directory N/A N/A N/A \d+ N/A _float_to_regex N/A N/A self element job_directory N/A N/A N/A [-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)? N/A _tool_wrapper_to_regex N/A N/A self element job_directory N/A N/A N/A wrapper_name N/A N/A self __value_or_text element name N/A N/A wrapper_name N/A N/A N/A Exception Invalid validator - found tool_wrapper element without name. N/A path N/A join N/A job_directory path tool_files wrapper_name N/A N/A escape path N/A _configfile_to_regex N/A N/A self element job_directory N/A N/A N/A wrapper_name N/A N/A self __value_or_text element name N/A path N/A join N/A job_directory path configs wrapper_name N/A N/A escape path N/A _input_to_regex N/A N/A self element job_directory N/A N/A N/A N/A (%s.*) N/A escape N/A join N/A job_directory path inputs N/A _output_to_regex N/A N/A self element job_directory N/A N/A N/A work_dir_file N/A N/A element get from_work_dir None N/A regex N/A (%s.*) N/A escape N/A join N/A job_directory path outputs N/A work_dir_file N/A N/A regex N/A %s N/A escape N/A join N/A job_directory path working work_dir_file N/A regex N/A _group_to_regex N/A N/A self element job_directory N/A N/A N/A N/A N/A self _expression_to_regex job_directory element default_sep N/A __value_or_text N/A N/A self element attribute N/A value N/A N/A value N/A N/A element get attribute None N/A N/A value None N/A N/A value N/A element text N/A value N/A N/A