Module Expr Str Import alias Import alias Import alias Import alias identifier ImportFrom alias Import alias identifier ImportFrom alias ImportFrom alias FunctionDef arguments args NameParam NameParam defaults body Expr Str Assign NameStore Call AttributeLoad NameLoad attr keyword Str Expr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad NameLoad NameLoad Assign TupleStore NameStore NameStore Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad Expr Call AttributeLoad NameLoad attr NameLoad Expr Call NameLoad NameLoad NameLoad Assert CompareEq NameLoad NameLoad decorator_list FunctionDef arguments args NameParam NameParam defaults body Expr Str Assign NameStore Call AttributeLoad NameLoad attr keyword Str Expr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad NameLoad NameLoad Assign TupleStore NameStore NameStore Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad Assign NameStore Call NameLoad Call NameLoad AttributeLoad NameLoad attr Assert CompareEq SubscriptLoad NameLoad Index NameLoad SubscriptLoad NameLoad Index NameLoad Assert CompareEq NameLoad NameLoad Expr Call AttributeLoad NameLoad attr NameLoad decorator_list FunctionDef arguments args NameParam NameParam NameParam NameParam defaults body Expr Str Assign NameStore Call AttributeLoad NameLoad attr keyword Str Expr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad NameLoad NameLoad keyword NameLoad Assign TupleStore NameStore NameStore Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad keyword NameLoad keyword NameLoad Expr Call AttributeLoad NameLoad attr NameLoad Expr Call NameLoad NameLoad NameLoad Assert CompareEq NameLoad NameLoad decorator_list FunctionDef arguments args NameParam NameParam NameParam NameParam defaults body Expr Str Assign NameStore Call AttributeLoad NameLoad attr keyword Str Expr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad NameLoad NameLoad keyword NameLoad Assign TupleStore NameStore NameStore Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad keyword NameLoad keyword NameLoad Assign NameStore Call NameLoad Call NameLoad AttributeLoad NameLoad attr Assert CompareEq SubscriptLoad NameLoad Index NameLoad SubscriptLoad NameLoad Index NameLoad Assert CompareEq NameLoad NameLoad Expr Call AttributeLoad NameLoad attr NameLoad decorator_list FunctionDef arguments args defaults body Expr Str Assign TupleStore NameStore NameStore Call AttributeLoad AttributeLoad NameLoad attr attr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad Str Assert CompareEq AttributeLoad NameLoad attr TupleLoad Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index Num attr Num Num Expr Call NameLoad NameLoad NameLoad decorator_list Call NameLoad keyword Str FunctionDef arguments args defaults body Expr Str Assign TupleStore NameStore NameStore Call AttributeLoad AttributeLoad NameLoad attr attr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad Str Assert CompareEq AttributeLoad NameLoad attr TupleLoad Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num attr Num Num Expr Call NameLoad NameLoad NameLoad decorator_list Call NameLoad keyword Str FunctionDef arguments args defaults body Expr Str Assign TupleStore NameStore NameStore Call AttributeLoad AttributeLoad NameLoad attr attr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad Str Assert CompareEq AttributeLoad NameLoad attr TupleLoad Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num attr Num Num Expr Call NameLoad NameLoad NameLoad decorator_list Call NameLoad keyword Str FunctionDef arguments args defaults body Expr Str Assign TupleStore NameStore NameStore Call AttributeLoad AttributeLoad NameLoad attr attr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad Str Assert CompareEq AttributeLoad NameLoad attr TupleLoad Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num attr Num Num Expr Call NameLoad NameLoad NameLoad decorator_list Call NameLoad keyword Str FunctionDef arguments args defaults body Expr Str Assign TupleStore NameStore NameStore Call AttributeLoad AttributeLoad NameLoad attr attr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad Str Assert CompareEq AttributeLoad NameLoad attr TupleLoad Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num attr Num Num Expr Call NameLoad NameLoad NameLoad decorator_list Call NameLoad keyword Str FunctionDef arguments args defaults body Expr Str Assign TupleStore NameStore NameStore Call AttributeLoad AttributeLoad NameLoad attr attr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad Str Assert CompareEq AttributeLoad NameLoad attr TupleLoad Num Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num Num attr Num Num Expr Call NameLoad NameLoad NameLoad decorator_list Call NameLoad keyword Str FunctionDef arguments args defaults body Expr Str Assign TupleStore NameStore NameStore Call AttributeLoad AttributeLoad NameLoad attr attr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad Str Assert CompareEq AttributeLoad NameLoad attr TupleLoad Num Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num Num attr Num Num Expr Call NameLoad NameLoad NameLoad decorator_list Call NameLoad keyword Str FunctionDef arguments args defaults body Expr Str Assign TupleStore NameStore NameStore Call AttributeLoad AttributeLoad NameLoad attr attr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad Str keyword TupleLoad Num Num Num Num keyword Str Assert CompareEq AttributeLoad NameLoad attr TupleLoad Num Num Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num Num Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num Num Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num Num Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num Num Num attr Num Num Expr Call NameLoad NameLoad NameLoad TupleLoad Num Num Num Num Str decorator_list Call NameLoad keyword Str FunctionDef arguments args defaults body Expr Str Assign TupleStore NameStore NameStore Call AttributeLoad AttributeLoad NameLoad attr attr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad Str keyword TupleLoad Num Num Num Num keyword Str Assert CompareEq AttributeLoad NameLoad attr TupleLoad Num Num Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num Num Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num Num Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num Num Num attr Num Num Assert CompareLtE Call AttributeLoad NameLoad attr BinOpSub AttributeLoad SubscriptLoad NameLoad Index TupleLoad Num Num Num Num attr Num Num Expr Call NameLoad NameLoad NameLoad TupleLoad Num Num Num Num Str decorator_list Call NameLoad keyword Str
N/A N/A  Tests for the fileio.varian submodule  N/A tempfile N/A os N/A shutil N/A numpy np numpy.testing assert_array_equal N/A nmrglue ng nose.plugins.attrib attr setup DATA_DIR write_readback N/A N/A dic data N/A N/A N/A  write out and readback a Agilent/varian file directory.  N/A td N/A N/A tempfile mkdtemp dir . N/A N/A N/A N/A ng varian write td dic data N/A N/A rdic rdata N/A N/A N/A ng varian read td N/A N/A N/A shutil rmtree td N/A N/A assert_array_equal data rdata N/A N/A dic rdic N/A lowmem_write_readback N/A N/A dic data N/A N/A N/A  lowmemory write out and readback a Agilent/Varian directory.  N/A td N/A N/A tempfile mkdtemp dir . N/A N/A N/A N/A ng varian write_lowmem td dic data N/A N/A rdic rdata N/A N/A N/A ng varian read_lowmem td N/A s N/A tuple N/A range N/A data ndim N/A N/A N/A data N/A s N/A rdata N/A s N/A N/A dic rdic N/A N/A N/A shutil rmtree td N/A write_fid_readback N/A N/A dic data shape torder N/A N/A N/A  Writeout and readback a Agilent/Varian fid file  N/A tf N/A N/A tempfile mktemp dir . N/A N/A N/A N/A ng varian write_fid tf dic data torder torder N/A N/A rdic rdata N/A N/A N/A ng varian read_fid tf shape shape torder torder N/A N/A N/A os remove tf N/A N/A assert_array_equal data rdata N/A N/A dic rdic N/A lowmem_fid_write_readback N/A N/A dic data shape torder N/A N/A N/A  Lowmemory writeout and readback a Agilent/Varian fid file  N/A tf N/A N/A tempfile mktemp dir . N/A N/A N/A N/A ng varian write_fid_lowmem tf dic data torder torder N/A N/A rdic rdata N/A N/A N/A ng varian read_fid_lowmem tf shape shape torder torder N/A s N/A tuple N/A range N/A data ndim N/A N/A N/A data N/A s N/A rdata N/A s N/A N/A dic rdic N/A N/A N/A os remove tf N/A test_1d N/A N/A N/A N/A N/A  reading/writing of 1D Varian file  N/A N/A dic data N/A N/A N/A ng varian read N/A N/A N/A os path join DATA_DIR agilent_1d N/A N/A N/A data shape N/A 1500 N/A N/A N/A N/A np abs N/A N/A N/A data N/A 0 real 91899.24 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A 0 imag -1964.7 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A 1 real 168844.25 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A 1 imag -49503.41 0.01 N/A N/A write_readback dic data N/A N/A attr speed fast test_2d N/A N/A N/A N/A N/A  reading/writing of 2D Varian file  N/A N/A dic data N/A N/A N/A ng varian read N/A N/A N/A os path join DATA_DIR agilent_2d N/A N/A N/A data shape N/A 332 1500 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 0 1 real 360.07 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 0 1 imag -223.2 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 10 18 real 17.93 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 10 18 imag -67.2 0.01 N/A N/A write_readback dic data N/A N/A attr speed fast test_2d_lowmem N/A N/A N/A N/A N/A  low memory reading/writing of 2D Varian file  N/A N/A dic data N/A N/A N/A ng varian read_lowmem N/A N/A N/A os path join DATA_DIR agilent_2d N/A N/A N/A data shape N/A 332 1500 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 0 1 real 360.07 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 0 1 imag -223.2 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 10 18 real 17.93 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 10 18 imag -67.2 0.01 N/A N/A lowmem_write_readback dic data N/A N/A attr speed fast test_2d_tppi N/A N/A N/A N/A N/A  reading/writing of 2D Varian file with TPPI encoding  N/A N/A dic data N/A N/A N/A ng varian read N/A N/A N/A os path join DATA_DIR agilent_2d_tppi N/A N/A N/A data shape N/A 600 1400 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 0 1 real -4589.29 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 0 1 imag -1691.82 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 10 18 real -166.62 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 10 18 imag -594.73 0.01 N/A N/A write_readback dic data N/A N/A attr speed fast test_2d_tppi_lowmem N/A N/A N/A N/A N/A  low memory reading/writing of 2D Varian file with TPPI encoding  N/A N/A dic data N/A N/A N/A ng varian read_lowmem N/A N/A N/A os path join DATA_DIR agilent_2d_tppi N/A N/A N/A data shape N/A 600 1400 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 0 1 real -4589.29 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 0 1 imag -1691.82 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 10 18 real -166.62 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 10 18 imag -594.73 0.01 N/A N/A lowmem_write_readback dic data N/A N/A attr speed fast test_3d N/A N/A N/A N/A N/A  reading/writing of 3D Varian file  N/A N/A dic data N/A N/A N/A ng varian read N/A N/A N/A os path join DATA_DIR agilent_3d N/A N/A N/A data shape N/A 128 88 1250 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 0 1 2 real 7.98 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 0 1 2 imag 33.82 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 10 11 18 real -9.36 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 10 11 18 imag -7.75 0.01 N/A N/A write_readback dic data N/A N/A attr speed slow test_3d_lowmem N/A N/A N/A N/A N/A  low memory reading/writing of 3D Varian file  N/A N/A dic data N/A N/A N/A ng varian read_lowmem N/A N/A N/A os path join DATA_DIR agilent_3d N/A N/A N/A data shape N/A 128 88 1250 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 0 1 2 real 7.98 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 0 1 2 imag 33.82 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 10 11 18 real -9.36 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 10 11 18 imag -7.75 0.01 N/A N/A lowmem_write_readback dic data N/A N/A attr speed slow test_4d N/A N/A N/A N/A N/A  reading/writing of 4D Varian fid file  N/A N/A dic data N/A N/A N/A ng varian read_fid N/A N/A N/A os path join DATA_DIR agilent_4d/fid shape N/A 8 12 16 1400 torder r N/A N/A N/A data shape N/A 8 12 16 1400 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 0 1 2 3 real 395.11 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 0 1 2 3 imag 52.72 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 3 10 11 18 real 51.81 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 3 10 11 18 imag 16.01 0.01 N/A N/A write_fid_readback dic data N/A 8 12 16 1400 r N/A N/A attr speed slow test_4d_lowmem N/A N/A N/A N/A N/A  low memory reading/writing of 4D Varian fid file  N/A N/A dic data N/A N/A N/A ng varian read_fid_lowmem N/A N/A N/A os path join DATA_DIR agilent_4d/fid shape N/A 8 12 16 1400 torder r N/A N/A N/A data shape N/A 8 12 16 1400 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 0 1 2 3 real 395.11 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 0 1 2 3 imag 52.72 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 3 10 11 18 real 51.81 0.01 N/A N/A N/A N/A np abs N/A N/A N/A data N/A N/A 3 10 11 18 imag 16.01 0.01 N/A N/A lowmem_fid_write_readback dic data N/A 8 12 16 1400 r N/A N/A attr speed slow