Module Import alias alias alias Assign TupleStore NameStore NameStore Call AttributeLoad NameLoad attr Str Expr Call AttributeLoad AttributeLoad NameLoad attr attr BinOpAdd NameLoad Str ImportFrom alias ImportFrom alias Expr Call AttributeLoad NameLoad attr Str Assign TupleStore NameStore NameStore Call NameLoad Str Str keyword Str keyword Str keyword Str Print BinOpAdd BinOpAdd BinOpAdd Str Call NameLoad SubscriptLoad SubscriptLoad NameLoad Index Num Index Num Str Call NameLoad SubscriptLoad SubscriptLoad NameLoad Index Num Index Num
N/A N/A os sys commands N/A N/A status path_sct N/A N/A commands getstatusoutput echo $SCT_DIR N/A N/A N/A N/A sys path append N/A path_sct /scripts msct_register_landmarks getRigidTransformFromImages msct_register_regularized generate_warping_field N/A N/A N/A os chdir /Users/tamag/data/work_on_registration N/A N/A rotation_matrix translation_array N/A getRigidTransformFromImages pad_carre.nii.gz pad_carre_after_rotation.nii.gz constraints xy metric MeanSquares center_rotation BarycenterImage N/A N/A N/A N/A 
The cosine and the sine are:  N/A str N/A N/A rotation_matrix N/A 0 N/A 0 ,  N/A str N/A N/A rotation_matrix N/A 1 N/A 0