Module ImportFrom alias Import alias identifier FunctionDef arguments args NameParam defaults body Return BinOpAdd BinOpAdd Str Call NameLoad NameLoad Str decorator_list ClassDef bases body FunctionDef arguments args NameParam NameParam defaults body Assign AttributeStore NameLoad attr Call NameLoad Assign NameStore Call NameLoad Num Expr Call AttributeLoad AttributeLoad NameLoad attr attr Call NameLoad ListLoad Str Call NameLoad NameLoad Call NameLoad Call NameLoad Num For NameStore Call NameLoad Num Num body Expr Call AttributeLoad AttributeLoad NameLoad attr attr Call NameLoad ListLoad Str Call NameLoad Call NameLoad BinOpSub NameLoad Num Call NameLoad Call NameLoad NameLoad Expr Call AttributeLoad AttributeLoad NameLoad attr attr Expr Call AttributeLoad NameLoad attr AttributeLoad AttributeLoad NameLoad attr attr Str decorator_list FunctionDef arguments args NameParam defaults body Expr Str Assign NameStore Call AttributeLoad AttributeLoad NameLoad attr attr Assert CompareEq NameLoad Num decorator_list FunctionDef arguments args NameParam defaults body Expr Str Assign NameStore Call AttributeLoad AttributeLoad AttributeLoad NameLoad attr attr attr Num Print BinOpAdd Str Call NameLoad NameLoad Assert CompareEq SubscriptLoad NameLoad Index Num Num decorator_list FunctionDef arguments args NameParam defaults body Expr Str Assign NameStore Call AttributeLoad AttributeLoad NameLoad attr attr Expr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad Assign NameStore Call AttributeLoad AttributeLoad NameLoad attr attr Assert CompareEq NameLoad Num decorator_list FunctionDef arguments args NameParam defaults body Expr Str For NameStore Call NameLoad Num body Assign NameStore Call AttributeLoad AttributeLoad NameLoad attr attr Expr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad Assign NameStore Call AttributeLoad AttributeLoad NameLoad attr attr Expr Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad Assign NameStore Call AttributeLoad AttributeLoad NameLoad attr attr Assert CompareEq NameLoad NameLoad Assert CompareEq Call AttributeLoad AttributeLoad NameLoad attr attr NameLoad decorator_list FunctionDef arguments args NameParam defaults body Expr Str Assert CompareEq Call AttributeLoad AttributeLoad NameLoad attr attr Call NameLoad ListLoad Str Call NameLoad Call NameLoad Num Call NameLoad Call NameLoad Num NameLoad decorator_list decorator_list
N/A pydpiper.pipeline * N/A networkx nx generateFile N/A N/A i N/A N/A N/A N/A N/A filename_ N/A str i .mnc N/A TestSimplePipeline N/A N/A setup_method N/A N/A self method N/A N/A N/A N/A self p N/A Pipeline N/A startFile N/A generateFile 0 N/A N/A N/A N/A self p addStage N/A CmdStage N/A somecommand N/A InputFile startFile N/A OutputFile N/A generateFile 1 N/A i N/A range 2 100 N/A N/A N/A N/A N/A self p addStage N/A CmdStage N/A somecommand N/A InputFile N/A generateFile N/A i 1 N/A OutputFile N/A generateFile i N/A N/A N/A N/A self p initialize N/A N/A N/A nx write_dot N/A N/A self p G simple-test-pipeline.dot N/A test_graph_head N/A N/A self N/A N/A N/A make sure that it finds the graph head correctly N/A runnableStage N/A N/A N/A self p getRunnableStageIndex N/A N/A runnableStage 0 N/A test_dependency N/A N/A self N/A N/A N/A make sure that random dependency is correct N/A s N/A N/A N/A N/A self p G predecessors 10 N/A N/A S:  N/A str s N/A N/A N/A s N/A 0 9 N/A test_set_runnable N/A N/A self N/A N/A N/A make sure that it correctly updates runnable class N/A s N/A N/A N/A self p getRunnableStageIndex N/A N/A N/A N/A self p setStageFinished s N/A s N/A N/A N/A self p getRunnableStageIndex N/A N/A s 1 N/A test_stage_failure_pipe_finish N/A N/A self N/A N/A N/A make sure that pipeline finishes when stage fails and no successors can run N/A i N/A range 10 N/A N/A s N/A N/A N/A self p getRunnableStageIndex N/A N/A N/A N/A self p setStageFinished s N/A s N/A N/A N/A self p getRunnableStageIndex N/A N/A N/A N/A self p setStageFailed s N/A s N/A N/A N/A self p getRunnableStageIndex N/A N/A s None N/A N/A N/A N/A N/A self p continueLoop False N/A test_stage_already_exists N/A N/A self N/A N/A N/A make sure that if a stage already exists it is not recreated N/A N/A N/A N/A N/A self p addStage N/A CmdStage N/A somecommand N/A InputFile N/A generateFile 15 N/A OutputFile N/A generateFile 16 None N/A N/A