) Non-structural polyprotein alignment of all 00 Alphaviruses in our dataset. (B) Non-structural polyproteins of 'New world' Alphaviruses. (C) Non-structural polyproteins of 'SFV Complex' Alphaviruses. Non-structural polyprotein sequences were aligned with MAFFT using the default settings at <http://www.ebi.ac.uk/Tools/msa/mafft/>. Codon alignment was generated with pal0nal (<http://www.bork.embl.de/pal0nal/>).  ######   Click here for additional data file.  00.0000/peerj.0000/supp-0  ###### Synplot0 analysis of non-structural polyproteins of alphaviruses using 0