Het(\>0) Variant in Q000000000000000000000000000000000Comparison between the pipelines have been done for unfiltered sets (CASAVA ALL, GATK ALL), and subset of variants fulfilling the criteria of Homozygous Recessive Conditions (HRC).Table 0**GATK and CASAVA comparison in diseased Family 0**PipelinesCASAVA allGATK allHRCHRC