public void set(String dna) {
		char bases[] = dna.toCharArray();
		for (int i = 0; i < bases.length; i++) {
			// Fake count
			for (int j = 0; j < BASES.length; j++)
				countMatrix[j][i] = 1;

			countMatrix[base2int(bases[i])][i] = SCALE;
		}
	}