void checkMotif(String genomeVer, String vcfFile, String effectDetails, EffectImpact impact) {
		String args[] = { "-classic", "-v", "-motif", "-ud", "0", genomeVer, vcfFile };
		SnpEff cmd = new SnpEff(args);

		// Run
		SnpEffCmdEff cmdEff = (SnpEffCmdEff) cmd.snpEffCmd();
		List<VcfEntry> vcfEntries = cmdEff.run(true);

		// Check results
		int numNextProt = 0;
		for (VcfEntry ve : vcfEntries) {
			for (VcfEffect veff : ve.parseEffects()) {
				System.out.println("\t" + veff);
				if ((veff.getEffect() == EffectType.MOTIF) // Is it motif?
						&& effectDetails.equals(veff.getEffectDetails()) // Are details OK? 					
						&& (impact == veff.getImpact())) // Is impact OK?
					numNextProt++;
			}
		}

		Assert.assertEquals(1, numNextProt);
	}