public void copySummaries(String base){
        File F = new File(base);
        for(File filter : F.listFiles())
        {
            if(filter.isDirectory())
            {
                String filterName = filter.getName();
                System.out.println(filterName);
                for(File threshold : filter.listFiles())
                {
                    if(threshold.isDirectory())
                    {
                        String thresholdName = threshold.getName();
                        System.out.println("\t" + thresholdName);
                        for(File f : threshold.listFiles())
                        {
                            if(f.isFile() && f.getName().contains("summary"))
                            {
                                copyFile(f,new File(filter.getAbsolutePath() + File.separator + filterName+thresholdName + "summary.txt"));
                            }
                        }
                    }
                }
                combineFilterSummaries(filter.getAbsolutePath());
            }
        }
    }