CoreBiome | Full-stack Software Engineers | Minneapolis/St. Paul, MN | Full-Time | ONSITE or REMOTE | <a href="
Our company specializes in fast, reliable microbiome analysis using cutting-edge genomics and informatics. Our unit ensures quick, accurate, and reproducible data analysis in a secure environment for ever-increasing dynamic workloads. By facilitating fast and easy data access for our clients, we expedite advances in scientific knowledge.
You would be working in a few key areas of our code base:
- Building internal tools to help automate and record laboratory processes
- Building the API that unifies different portions of our pipeline, internal tools, and customer portal. This is currently written in Flask.
- Optimizing the pipeline for speed and reproducibility. The pipeline is comprised of Python, R, Nextflow, optimized executables and tools, with pytest in CircleCI and Jenkins for testing.
- Ensuring data security. Genomic data is personal data, so security is a top concern with regulatory requirements. Data is stored in S3, with some metadata in PostgreSQL and MongoDB databases.
Interested? We accept two forms of applications:
1. Standard HR application at <a href="
2. Via POST request to <a href=", with a JSON body containing the string fields "first_name", "last_name", "email", "phone", "role", and a "urls" list containing any relevant links (e.g. LinkedIn, resume)
Credit to Phil Freo for the POST request idea.
Feel free to reach out at REDACTED_EMAIL!