#genome
stringclasses
121 values
asm_name
stringclasses
120 values
assembly_accession
stringclasses
120 values
bioproject
stringclasses
45 values
biosample
stringclasses
120 values
wgs_master
float64
seq_rel_date
stringclasses
98 values
submitter
stringclasses
76 values
ftp_path
stringclasses
120 values
img_id
float64
637M
2.51B
gtdb_id
stringclasses
120 values
scope
stringclasses
3 values
assembly_level
stringclasses
1 value
genome_rep
stringclasses
1 value
refseq_category
stringclasses
3 values
release_type
stringclasses
2 values
taxid
float64
1.15k
681k
species_taxid
float64
7
911k
organism_name
stringclasses
120 values
infraspecific_name
stringclasses
112 values
isolate
stringclasses
1 value
superkingdom
stringclasses
2 values
phylum
stringclasses
18 values
class
stringclasses
30 values
order
stringclasses
56 values
family
stringclasses
75 values
genus
stringclasses
89 values
species
stringclasses
117 values
classified
bool
1 class
lv1_group
stringclasses
2 values
lv2_group
stringclasses
13 values
score_faa
float64
0.93
1
score_fna
float64
0.88
1
score_rrna
float64
0.1
1
score_trna
float64
0.6
1
total_length
float64
618k
9.12M
contigs
float64
1
22
gc
float64
22.5
72.2
n50
float64
616k
9.03M
l50
float64
1
1
proteins
float64
525
7.92k
protein_length
float64
172k
2.68M
coding_density
float64
74
96.9
completeness
float64
76.3
100
contamination
float64
0
4.4
strain_heterogeneity
float64
0
100
markers
float64
124
383
5s_rrna
stringclasses
2 values
16s_rrna
stringclasses
1 value
23s_rrna
stringclasses
1 value
trnas
float64
14
20
draft_quality
stringclasses
2 values
start_position
int64
0
10M
human_label
int64
0
1
autotrain_text
stringlengths
150
150
autotrain_label
class label
121 classes
G000008165
ASM816v1
GCF_000008165.1
PRJNA58091
SAMN02598266
null
2004/06/24
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/165/GCF_000008165.1_ASM816v1
637,000,015
RS_GCF_000008165.1
Monoisolate
Complete Genome
Full
reference genome
Major
260,799
1,392
Bacillus anthracis str. Sterne
strain=Sterne
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus anthracis
true
Eubacteria
Firmicutes
1
1
1
1
5,228,663
1
35.38
5,228,663
1
5,471
1,495,624
84.251844
99.23
0.15
0
381
yes
yes
yes
20
high
286,650
0
AACAGATAAGCAACAACTACTCCGTATAAAGGGAATCCTATAACTAAAGTAGTATATAAGTTAACTTCAGTGAATAACTGGTGGAACCAAATAGTCGGAGTTGGCTGTTTTGTTTTTATATGTATATAAGAGGCTACTACGACTAAGAAA
6Bacillus anthracis str. Sterne ASM816v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,180,150
1
GATAAAGCAGCACAAATTATGAACAAATGGGAGACTTTAAAATTAATCCACCTTCTCAAATTAATGAGAATTAAGTTTGAGAAACAGAACACTGTATTTGCTCAAGGAATTCTAAGCTAAAATTTTGCTGATAAAAATGCTTGTTACTCA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
995,550
1
CTGAACAAGCAGCATTTTCCTCCCAAGTCACACTGTCCTTCCTTTTTTATTTTTTTGAGACAGAGTCTCACTCTGTCACCCAGGCTGGAGTGCCGTAGCGCGATCTCGGCTCACTGCAGGCTCTGCCTCCCAGGTTCAAGCAACTCTCCT
120homo sapiens
G000009905
ASM990v1
GCF_000009905.1
PRJNA224116
SAMD00061067
null
2004/09/02
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/905/GCF_000009905.1_ASM990v1
637,000,306
RS_GCF_000009905.1
Monoisolate
Complete Genome
Full
representative genome
Major
292,459
2,734
Symbiobacterium thermophilum IAM 14863
strain=IAM14863
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Symbiobacteriaceae
Symbiobacterium
Symbiobacterium thermophilum
true
Eubacteria
Firmicutes
1
1
1
1
3,566,135
1
68.67
3,566,135
1
3,297
1,051,001
86.832243
98.02
0.03
0
347
yes
yes
yes
20
high
1,894,230
0
GGCACCAGGCGGAACCCATCCCCGCTGCAGGGCCGCTTTCTCCTCCGCCCGGTCCGGCACCCGGACCTCCCCGTCGGCCGTGACCTCGGTGCCCGGAATCAGCAGGGCGGCGCCGAGGGCGTGCCGGGCCGCCTGGTAGACGGCCGCCCG
99Symbiobacterium thermophilum IAM 14863 IAM14863
G000006605
ASM660v1
GCF_000006605.1
PRJNA224116
SAMEA3283089
null
2005/06/27
Bielefeld Univ
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/605/GCF_000006605.1_ASM660v1
637,000,085
RS_GCF_000006605.1
Monoisolate
Complete Genome
Full
representative genome
Major
306,537
38,289
Corynebacterium jeikeium K411
strain=K411 = NCTC 11915
null
Bacteria
Actinobacteria
Actinobacteria
Corynebacteriales
Corynebacteriaceae
Corynebacterium
Corynebacterium jeikeium
true
Eubacteria
Actinobacteria
1
0.996
1
1
2,476,822
2
61.35
2,462,499
1
2,137
751,284
89.378688
100
0.68
0
319
yes
yes
yes
20
high
936,000
0
CGCCCGATCGGGGAAGCAGCGCAGGTCCTCTTCATTACGCTCGTAAGCTTCCTGCTGCTAGGCGTGCTCTGGGGCGTGATTCACCCGACCTCCGAACTAGTGGTGGCCACTGATGGCGGGGCAGACATGGCTCCGGGAACCGAGGATGCC
31Corynebacterium jeikeium K411 K411 = NCTC 11915
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,721,500
1
AAAAGTGCATACTTTTATGAGGCTATAAATGCATAAAGACGGATATATAAAATATATAAGTGTATATATAATTTTAGGGCTTTTTTAGTGGGGGAAAATCCACAAATGGATAATACTTTGGATATTTTCTGCAGCTCGCTTTTTTCCACC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,147,000
1
GATCTACTTCACTCGATCCCTCCACAGTCAGCAGGACAACTTTATTCCAGTCTGGGGGACGCCTTACCCGCAGGAGCTGCCAATCACTGCAGACGAAGATGCTCACGTAATCTTTGCAGTCGCGCCGTTCTGCCAGCGCCATGTAGCGGC
120homo sapiens
G000008765
ASM876v1
GCF_000008765.1
PRJNA57677
SAMN02603243
null
2002/11/22
Genome Therapeutics
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/765/GCF_000008765.1_ASM876v1
637,000,076
RS_GCF_000008765.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,562
1,488
Clostridium acetobutylicum ATCC 824
strain=ATCC 824
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Clostridiaceae
Clostridium
Clostridium acetobutylicum
true
Eubacteria
Firmicutes
1
0.998
0.1
0.9
4,132,880
2
30.93
3,940,880
1
3,896
1,211,240
86.343567
100
0
0
345
yes
yes
yes
19
high
154,440
0
AACGTTATCATAACGTGGTAATAAAAAATAAAATGATATAATAGGCTAAAATAGCAAAAAATCGCTAGATATTAAGATTGATGAAAAATTATGAAGATGATATAATGTAAACGTAATCAAGAATGATTGCACAAAGTAATTGTTTTAAAT
29Clostridium acetobutylicum ATCC 824
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,427,950
1
GAGGTGGTGTGTGGAAGGGATAACTTTGAAACTGTGTGTAAGTTATCATAGCCACCAGAGTTTCTTGATGGTGGCCTCCCGTTCCCGTGCAATGAGACAGCCTCCTGTCATCCCTTGTAAGATGGTGTTAATCTGACAAGAAAGGGAAGT
120homo sapiens
G000009825
ASM982v1
GCF_000009825.1
PRJNA224116
SAMD00061074
null
2004/12/30
Kao Corporation, Biological Science Laboratories, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/825/GCF_000009825.1_ASM982v1
637,000,019
RS_GCF_000009825.1
Monoisolate
Complete Genome
Full
representative genome
Major
66,692
79,880
Bacillus clausii KSM-K16
strain=KSM-K16
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus clausii
true
Eubacteria
Firmicutes
1
1
1
1
4,303,871
1
44.75
4,303,871
1
4,304
1,270,194
86.940919
98.67
0.33
0
373
yes
yes
yes
20
high
3,197,220
0
TGCCTCATATTCGTCAATGCTGTTTGCAATAAAGGATCTCTCCTTAGCAGACCACTTTGCGCTTTTTCTTCCCAACGTTTTGCCTCACTTTCCGTTAGCTGATCGCGCTCTTCATCAGTCAGCGGGTCATAGTCACGGTAGTATTTTTCG
8Bacillus clausii KSM-K16
G000009965
ASM996v1
GCF_000009965.1
PRJNA224116
SAMD00061071
null
2005/01/05
Kyoto University, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/965/GCF_000009965.1_ASM996v1
638,154,520
RS_GCF_000009965.1
Monoisolate
Complete Genome
Full
representative genome
Major
69,014
311,400
Thermococcus kodakarensis KOD1
strain=KOD1
null
Archaea
Euryarchaeota
Thermococci
Thermococcales
Thermococcaceae
Thermococcus
Thermococcus kodakarensis
true
Archaea
Euryarchaeota
1
1
0.9
0.9
2,088,737
1
52
2,088,737
1
2,314
650,473
91.73242
100
0
0
190
no
yes
yes
19
medium
580,580
0
TTTCTATCTAGGACATATAATGGACAGGGAGTTTAAGGATACATTACAGAGACAATTCAAAAACGCAGTGGATAATTTTGCGATGTCTAATCTTCATACAAATAATAACGAACAATGGATATTTAGTGTCTGTAGCTTTTGTAAAGCCCA
102Thermococcus kodakarensis KOD1
G000007645
ASM764v1
GCF_000007645.1
PRJNA57861
SAMN02603126
null
2002/12/20
Chinese National HGC, Shanghai
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/645/GCF_000007645.1_ASM764v1
637,000,281
RS_GCF_000007645.1
Monoisolate
Complete Genome
Full
reference genome
Major
176,280
1,282
Staphylococcus epidermidis ATCC 12228
strain=ATCC 12228
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Staphylococcus
Staphylococcus epidermidis
true
Eubacteria
Firmicutes
1
0.977
0.9
1
2,564,615
7
32.05
2,499,279
1
2,354
721,937
82.93198
99.81
0
0
345
yes
yes
yes
20
high
1,684,020
0
TGATAACAGCTACGCCGCCAGCTAGTTTTGCCAAACGTTCCTGTAATTTTTCTTTATCAAACTCTGAATCAGTTTCTTCAATTTGTGCTTTAATTTGACCTACACGAGCATCAATATTATTTTCATCACCATTACCATCTACGACTGTTG
88Staphylococcus epidermidis ATCC 12228 ASM764v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
79,650
1
AAAAAGAGAACATCTATGTGTCCACCATACAGGATATGAAATAGAACATTTGCCGGCCATGGTGGCTCACACCTGTAATCCCAGTACTTTGGGAGGCCGAGGTGGGAGGATCACTTAAGCCCAGGACACAGGTTGCAGTGAGCCAAGATC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,795,800
1
TAGTCTTGTTACTTTCTGTCATCCAGTTGTCCAGCTACTGCTACTTTCTATAGCCTGCAATTCACTTTGGTTTTGTTGTTGTTGTTGTTTGTTTTGTTTTTTGTTGTTGTTGTTGTTTTGAGACAGTCTCGCTCTGTCACCCAGGCTGGA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,523,150
1
CGGCTGAGGATGCAGGGCTCCCGGGCACGGTGCTAGCCCTGCCTTGAGACACCCCGAGAGCTGTGGGAAGAGCTGTGGGATCCCCTATTGCATCACAAAGCGGCCCTGGAGGGCTGGTCTTTATTTTGATGAGGCTGAGAAGGGAAGGCT
120homo sapiens
G000006175
ASM617v2
GCF_000006175.1
PRJNA224116
SAMN00000040
null
2010/06/03
US DOE Joint Genome Institute (JGI-PGF)
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/175/GCF_000006175.1_ASM617v2
646,564,549
RS_GCF_000006175.1
Multispecies
Complete Genome
Full
representative genome
Major
456,320
2,188
Methanococcus voltae A3
strain=A3
null
Archaea
Euryarchaeota
Methanococci
Methanococcales
Methanococcaceae
Methanococcus
Methanococcus voltae
true
Archaea
Euryarchaeota
0.97
1
1
1
1,936,387
1
28.59
1,936,387
1
1,727
526,927
80.167033
99.05
0
0
165
no
yes
yes
19
medium
1,128,010
0
CTCTTGATACATATTCGTCTAAAGCTTTATCGCCCTCTTCTTCAAATTTCTTAGCCCATTTTTCATTTCCAAAGTCTTTTGCTCCACAAGCTATTAATTCTTTTACCCGGTGACTTTCAATAACGTGGGGATAACCCACCTTTAAATCAT
59Methanococcus voltae A3
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,180,550
1
AAAATGGATGGCAATCATTATCTTTTTTTATTGCAACAGAGTCCGCCCTCTGCCCTTCAGGGGAAATTCTTTTTCTTCTGTCTCCACCCCCTCAGGATCTTCAAGGGGGTGTAGGAGCCTTCAATGGGCTGATGCACAGAGCAACTGCCA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,462,900
1
GATTGCTTGCACCCAGGAGGTCAAGGCTGCAGTGAGCCGAGATCCTGCCACTGCACTCCAGCCTGGGCCACAGAGTGAGACTGTCTCAAAAAAAAAAAAGTTAGATCCATGATCATTTTCCTGAAGAGATTCGAGGACAGCTTAGTGCTA
120homo sapiens
G000008765
ASM876v1
GCF_000008765.1
PRJNA57677
SAMN02603243
null
2002/11/22
Genome Therapeutics
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/765/GCF_000008765.1_ASM876v1
637,000,076
RS_GCF_000008765.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,562
1,488
Clostridium acetobutylicum ATCC 824
strain=ATCC 824
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Clostridiaceae
Clostridium
Clostridium acetobutylicum
true
Eubacteria
Firmicutes
1
0.998
0.1
0.9
4,132,880
2
30.93
3,940,880
1
3,896
1,211,240
86.343567
100
0
0
345
yes
yes
yes
19
high
1,231,750
0
TTGCATAACTCCATTTTCATTAAAATAATATTTATTTCCATTTACATCTTTTAAACCAGTAAGCATCATGCCGTTAGAATCAAAATAATGTTGAGAGGAAGAAGAATCCTTAAACCACCCAGTAAACATGGTACCATCAGAGTTAAAGTA
29Clostridium acetobutylicum ATCC 824
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,242,250
1
TTGTCCTATTTATTATTACTTATTGTTAATTGCTTACTGTGCCTAATATATAAATTAAACTTTATCATAGGCATGTAGTCTGTAGGAAAAAACAATATACATAGGGATGGGTACTATCTGAGGCTTCAGGCATCCGCTGGGGATCTTGGA
120homo sapiens
G000008605
ASM860v1
GCF_000008605.1
PRJNA224116
SAMN02604348
null
1999/12/22
US DOE Joint Genome Institute (JGI-PGF)
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/605/GCF_000008605.1_ASM860v1
637,000,328
GB_GCA_000008605.1
Monoisolate
Complete Genome
Full
representative genome
Major
243,276
160
Treponema pallidum subsp. pallidum str. Nichols
strain=Nichols
null
Bacteria
Spirochaetes
Spirochaetia
Spirochaetales
Spirochaetaceae
Treponema
Treponema pallidum
true
Eubacteria
Spirochaetes
0.99
1
1
1
1,138,011
1
52.78
1,138,011
1
1,009
357,124
92.473447
100
0
0
190
yes
yes
yes
20
high
879,060
0
TAAAGCAGGTCAATTCAATGTGCCTCTCGGACGCGCTGCACCTGCGTCTCCTTTTCTAAATACCACCGCGCCTACCCCTCGCAGTACACAGCCTGCGGCGCAGGTCGGACACCTTGCAATACGCATTGATGAGGAGAATTTACGCAGCTG
105Treponema pallidum subsp. pallidum str. Nichols ASM860v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,989,900
1
TCACTGCTGTATCACCTGGCAGAGTGTCAATGCTCTACCAATATTTCCAGAATGAAAGAATGAATGAATTTCAACTAGTGAGCTAAAATCAGAACTGAATGAGAAACTTGGTAAGTAGGAAGGAATCATTCTATCTTCATGTTCACACAG
120homo sapiens
G000010125
ASM1012v1
GCF_000010125.1
PRJNA224116
SAMD00061076
null
2005/08/12
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/125/GCF_000010125.1_ASM1012v1
637,000,284
RS_GCF_000010125.1
Monoisolate
Complete Genome
Full
representative genome
Major
342,451
29,385
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
strain=ATCC 15305
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Staphylococcus
Staphylococcus saprophyticus
true
Eubacteria
Firmicutes
1
0.992
1
1
2,577,899
3
33.19
2,516,575
1
2,502
730,892
83.519176
99.44
0
0
348
yes
yes
yes
20
high
2,277,990
0
TCTTGATAATGATAGTGCTCTTTGGTTAATATCAACCATTGTCACTTCGTGATGTGGGGAAACTTTTGCAATCATTAAACCGATAGGGCCATAGCCACAACCAACGTCTATAATTTTCTTCGTGGGACCAGGAGGATATGCTTTCAAAAA
90Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 ASM1012v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
701,700
1
CCTGGCTCACCTGCCTGTCACTCACGCACATCCCTGCCGAGAGTGGAACTGCTAAGGAGGTCAGCGGTGCCAGGCCGTGCAGATGACGGACTGCAAGTTCCGGGCACCCAGACCCAACCACGCCCTAGGCTCAGGTGCTAGACTAAGCGA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,821,500
1
TTGCACAACTCTGTGCAAATACAAAAAAAAAAAATCAACAACTTGTACACTTTATTTTTGTTTTTGAGACAGGGTCTCACTTTGTCACCCAGGCTGGAGTACAGTGATGTGATCTCAGCTCATCGCAGCCTCAACCTCCCCAGGCTCAGG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,241,850
1
CTGAGCTACAGGCTTATCGTCTGCCAAATTACCAGATGTTTCCAGGAAGACAGCTCTTATTTCCCTGTAGTTCCAGGAAATGTCTCATCTCTTATTGGCCCATCTTGAGTCACGTGTCTAATCTCTTGAATAAGGGGACATGGTCCTCTC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,071,050
1
GCCCCCCCTCCAGGAACCCCGGGCGCTTCTGCCCTGCACGGCCAGCGCTCTCCACCATCCCCACGGGGCCTTCGGACTTCCCCATCAGCAGGGCTCTGGACGGGAGAGCACCGCGGAGGAACCTGCAGGCCCAGGGCAGGGGAGAGGGGA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,909,050
1
GCAAAGTTGATCAGGAAAGGAAATGTAATCATAGAACTACTTTGTGGCTCAGCTGTGAATAATAATTACATAATTATGTAAATGTTGAATATTGATCTAACCACAAATTATGATACTGGGAGGAGCGGGGCAGGGAGCTGCACGTGTGTG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,535,450
1
TCAACTTCCTGTAATGGGAGGAACTCTGACACACTTCACAAAAGGGTGTCAAATTAGTTTTAAAGGGAAAAAGAACTGCAGCATGATCTGGAATTCGCTTTCTGCCCTGCGGTTCCACTGTGAAGGCAACACGCCTTCGAGGAGTTGGGG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,679,500
1
TCGCAACTCACGCCCAAGCTGCTCCGAGTGCCTAGCTTGGTGGGGAAAGGTGTGGAGTCACCACCTCCACTCTGCTCCTTCTCCAGGTGTCTGTCTGTCTTTGCTGCTGTCTTGGTGACTGTCCTCTGCCCCCCTGGCCTGGGCCTGACC
120homo sapiens
G000009705
ASM970v1
GCF_000009705.1
PRJNA224116
SAMD00061094
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1
637,000,199
RS_GCF_000009705.1
Monoisolate
Complete Genome
Full
representative genome
Major
103,690
103,690
Nostoc sp. PCC 7120
null
null
Bacteria
Cyanobacteria
null
Nostocales
Nostocaceae
Nostoc
Nostoc sp. PCC 7120
true
Eubacteria
Cyanobacteria
1
0.992
0.9
1
7,211,789
7
41.27
6,413,771
1
6,159
2,024,679
82.716938
99.19
0
0
360
yes
yes
yes
20
high
622,180
0
CACGTTTTGGGCAATGATTACATACTGGCATCAGAACGCCTTGTAAGTGCAGAGTCTCTATTGAGAGATGGCAATCTGACAGTGCGTGAATTTGTGCGTAGCGTTGCTAAATCAGAACTCTACAAAAAGAAATTTTTCTACAACAGCTTC
70Nostoc sp. PCC 7120 ASM970v1
G000011065
ASM1106v1
GCF_000011065.1
PRJNA62913
SAMN02604314
null
2003/03/28
Washington University Department of Molecular Biology and Pharmacology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/065/GCF_000011065.1_ASM1106v1
637,000,026
RS_GCF_000011065.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,186
818
Bacteroides thetaiotaomicron VPI-5482
strain=VPI-5482
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Bacteroidaceae
Bacteroides
Bacteroides thetaiotaomicron
true
Eubacteria
Bacteroidetes
1
0.998
0.7
1
6,293,399
2
42.86
6,260,361
1
4,944
1,919,297
89.876027
99.41
0.4
0
348
yes
yes
yes
20
high
2,086,890
0
TGTTGATTGTTTCAACTTCTTCTTCAGGAACTGAAGATGATCCGTGAAGTACGATAGGGAATCCCGGAAGTTTTTCCATTACAGCATCCAATACTTCGAAAGCCAATGGAGGAGGAACCATACGACCGGTAGCCGGATCGATGTGGCACT
11Bacteroides thetaiotaomicron VPI-5482
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,703,100
1
GCTCTGGATGCCGGAGCAGCAAACAAGACCCTTTCAGTTCCTGCTCCACTACATTCTAGAGATGAAAGGCAGACTGGCAAATAGCTAGATCTTGCAGGGTACAGTTACTTTAGACGAAAGGCAGAGGTATCTCTCCGTCGCTCAAAGTAT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,472,100
1
TGAGCACAGCCGATGTGCCAGGCATCAGAGATGCACTGCGGTGAATACACACTATCCTCGAAAGAACCCTAGAACTTGGTATGACTGCTGTTGTTACTGGGAGAACACTATGCAAATGAGGAAAGTGGGGCTGCAAGTGGAATTAGAGCG
120homo sapiens
G000008345
ASM834v1
GCF_000008345.1
PRJNA224116
SAMN02603281
null
2004/07/30
Goettingen Genomics Laboratory
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/345/GCF_000008345.1_ASM834v1
637,000,215
RS_GCF_000008345.1
Monoisolate
Complete Genome
Full
representative genome
Major
267,747
1,747
Propionibacterium acnes KPA171202
strain=KPA171202
null
Bacteria
Actinobacteria
Actinobacteria
Propionibacteriales
Propionibacteriaceae
Cutibacterium
Cutibacterium acnes
true
Eubacteria
Actinobacteria
1
1
1
1
2,560,265
1
60.01
2,560,265
1
2,373
780,330
89.799572
100
0
0
319
yes
yes
yes
20
high
699,660
0
TTGTTGCCTCGTTTCTCGGGAACTTCGTGGAGTGGTTCGACTATGCCACGTATTCATATTTGGCAGTGATAATCTCCAGAGTGTTCTTCCCCCAAGGAACAAGTAGGGACGCTCTTGTTCAGACATTCGCCATATTCGCCCTGTCCTTCC
77Propionibacterium acnes KPA171202
G000007805
ASM780v1
GCF_000007805.1
PRJNA57967
SAMN02604017
null
2003/03/05
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/805/GCF_000007805.1_ASM780v1
2,508,501,074
RS_GCF_000007805.1
Multiisolate
Complete Genome
Full
reference genome
Major
223,283
251,701
[Pseudomonas syringae] pv. tomato str. DC3000
strain=DC3000
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas syringae group genomosp. 3
true
Eubacteria
Proteobacteria
1
0.997
0.9
1
6,538,260
3
58.34
6,397,126
1
5,862
1,948,843
87.825109
100
0.22
0
381
yes
yes
yes
20
high
1,612,260
0
CAGCTCGGCGCTGAGCATCCCGCTGGATACTTTTATCTTCTTCGGCATGATCGACGCCCTGACAGCGCCTGTCGTCGTGACCGCGCTGGCCTCGAAGTTCGCCGGTGTGAGCATTGTGTGGATGATCATGGCCTGGCGTGCGCGCAACAA
119[Pseudomonas syringae] pv. tomato str. DC3000
G000009825
ASM982v1
GCF_000009825.1
PRJNA224116
SAMD00061074
null
2004/12/30
Kao Corporation, Biological Science Laboratories, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/825/GCF_000009825.1_ASM982v1
637,000,019
RS_GCF_000009825.1
Monoisolate
Complete Genome
Full
representative genome
Major
66,692
79,880
Bacillus clausii KSM-K16
strain=KSM-K16
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus clausii
true
Eubacteria
Firmicutes
1
1
1
1
4,303,871
1
44.75
4,303,871
1
4,304
1,270,194
86.940919
98.67
0.33
0
373
yes
yes
yes
20
high
340,210
0
GTGTATTTTGCGCATCGTTTTCCCTCCATCATGCAACTGCCCTGCAAAGCCGTTATCTTTTAGAAAGTACCACGATCAATTAAGGAAAACAATAATAGCTACAAGGATAGCTTGTATGAAATTTTATTTCGTAATAAATTAAAATTATAT
8Bacillus clausii KSM-K16
G000011065
ASM1106v1
GCF_000011065.1
PRJNA62913
SAMN02604314
null
2003/03/28
Washington University Department of Molecular Biology and Pharmacology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/065/GCF_000011065.1_ASM1106v1
637,000,026
RS_GCF_000011065.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,186
818
Bacteroides thetaiotaomicron VPI-5482
strain=VPI-5482
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Bacteroidaceae
Bacteroides
Bacteroides thetaiotaomicron
true
Eubacteria
Bacteroidetes
1
0.998
0.7
1
6,293,399
2
42.86
6,260,361
1
4,944
1,919,297
89.876027
99.41
0.4
0
348
yes
yes
yes
20
high
467,480
0
AGCGTATCAAGGCAAAGGGGGCTACTATTGTGATTTTCGAGCCCACTATGCAAGATGGTGAAACTTTCTTTGGAAGTCAAGTGATCAATAATCTGGTCGAGTTTAAGGAAATAAGTCAGGCCATAATTGCCAACCGTTACGATGCTTGTC
11Bacteroides thetaiotaomicron VPI-5482
G000008765
ASM876v1
GCF_000008765.1
PRJNA57677
SAMN02603243
null
2002/11/22
Genome Therapeutics
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/765/GCF_000008765.1_ASM876v1
637,000,076
RS_GCF_000008765.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,562
1,488
Clostridium acetobutylicum ATCC 824
strain=ATCC 824
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Clostridiaceae
Clostridium
Clostridium acetobutylicum
true
Eubacteria
Firmicutes
1
0.998
0.1
0.9
4,132,880
2
30.93
3,940,880
1
3,896
1,211,240
86.343567
100
0
0
345
yes
yes
yes
19
high
811,330
0
ATTTAGCAACAATTGCAAAAAAGTATCCTGATAAAAAATTTGCGATAATAGATGATGCATATGATAAGCAGCCTAAGAATATAATGTCATTAGTATTTAAAGAACAAGAAGGTTCATTTTTAATGGGTGTTATAGCAGGAAAGATGACAA
29Clostridium acetobutylicum ATCC 824
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,044,000
1
AGAGAGATCCTTTTGCATAGAAACAACTCATTTGGGAAATGCAAGCAGGGAGAGCCCTGTGCCCAGACTGCAGGGTAAGGCCCCAAGGGGCAGAGACCTGTGGCAGGGTGCTTCTGGCCAACCAGCCAAGGGGCATGAGCAGACAGTGGG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,872,750
1
TCCTCCTGCCTCAGCCTCCCGAGTAACTGGGACTACAGGCACGCACCACCATGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCTCAATCTCTTGACCTCATGATCCGCCCGCCTCAGCC
120homo sapiens
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
3,594,890
0
CGGCTTCAGATCGAGAAAATCGTCGCGCACGATGGAGGCGATGCCGGCATTGTTGACGAGGCAGTCGATCCGGCCGAATTCCGCGACGACCGCGTCGACGGTCGCCTGATGGCTCGAAAGGTCGGCAAGATCGGCGCGCAGGAAGATCAC
86Sinorhizobium meliloti 1021
G000007385
ASM738v1
GCF_000007385.1
PRJNA224116
SAMN02603680
null
2005/02/02
NIAB, Rural Development Administration
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/385/GCF_000007385.1_ASM738v1
637,000,346
GB_GCA_000007385.1
Multiisolate
Complete Genome
Full
representative genome
Major
291,331
347
Xanthomonas oryzae pv. oryzae KACC 10331
null
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xanthomonas
Xanthomonas oryzae
true
Eubacteria
Proteobacteria
1
1
0.9
1
4,941,439
1
63.69
4,941,439
1
4,831
1,427,680
85.113992
99.82
0
0
355
yes
yes
yes
20
high
733,850
0
CTGGGCGATGTGGCCTACCGCGAAGGCTATCTGCGCTCGCATTCGGACGTGGCGCTGATCACCGTGATCGCCTTGCTGGTGCTGGTGCAGGTGCTGCAGATGCTGGGAGACCGCCTGGTGGCGTACTACAGCCGGCGGTGAGCGGCGCTG
113Xanthomonas oryzae pv. oryzae KACC 10331
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,604,400
1
ATAGAAACTATAGACACCGGGAACTCCAAAAAAGGGAAGAGGGAAAGGGCTGAAAAACTACCTATTGGGTGGTGCTATGTTCATTATATGGGTGACAGGTTTTCAATAGAAGCCCAATGCTTAGCATCATGCAATATACCCTTGTAACAG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,491,900
1
GTGTGAGTCCCCGAGGTGTTCCCGCTTTTCCGTCATCTCGGAGGGACCTGCCTATGCTGACTGGTGGGTCATCAAGATTAATAAAGACAAAGGCTTTGGCGGATGCTCAGCTCAGGAAAAGCACCTGGAGCTGCTCTTTCCTGACTGATT
120homo sapiens
G000007805
ASM780v1
GCF_000007805.1
PRJNA57967
SAMN02604017
null
2003/03/05
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/805/GCF_000007805.1_ASM780v1
2,508,501,074
RS_GCF_000007805.1
Multiisolate
Complete Genome
Full
reference genome
Major
223,283
251,701
[Pseudomonas syringae] pv. tomato str. DC3000
strain=DC3000
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas syringae group genomosp. 3
true
Eubacteria
Proteobacteria
1
0.997
0.9
1
6,538,260
3
58.34
6,397,126
1
5,862
1,948,843
87.825109
100
0.22
0
381
yes
yes
yes
20
high
556,920
0
TGCCAGGGTGCAGACGCATGATCGGCGGAGGCGGCAGGAAGCGCAGCAAACCCGGACGGTGTTTCGCCCCACGGCTGCCAGAACCCGGCGCGGTCGGTCAGGCAATACAAGCGACTCCGGGCATCAAAACGAGGTTGCTGCAGGGATTCT
119[Pseudomonas syringae] pv. tomato str. DC3000
G000006865
ASM686v1
GCF_000006865.1
PRJNA57671
SAMN02603339
null
2001/03/21
INRA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/865/GCF_000006865.1_ASM686v1
637,000,144
RS_GCF_000006865.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,623
1,358
Lactococcus lactis subsp. lactis Il1403
strain=IL1403
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Lactococcus
Lactococcus lactis
true
Eubacteria
Firmicutes
1
1
1
1
2,365,589
1
35.33
2,365,589
1
2,383
693,662
86.378488
100
0
0
310
yes
yes
yes
20
high
198,120
0
TAAAATGTCATGCACCAGGTTGTCATCAAATTGGACTTCATCGCACAGCTGACGGACTTTATGTTCTTTGTCGAAAACATCATCCAGATGTACCTAATAACCTAACGCTCAAACACATTCAAAAATCACACGTCAATGCAAAAGCGAAAA
54Lactococcus lactis subsp. lactis Il1403 IL1403
G000008185
ASM818v1
GCF_000008185.1
PRJNA57583
SAMN02603967
null
2004/02/03
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/185/GCF_000008185.1_ASM818v1
637,000,327
RS_GCF_000008185.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,275
158
Treponema denticola ATCC 35405
strain=ATCC 35405
null
Bacteria
Spirochaetes
Spirochaetia
Spirochaetales
Spirochaetaceae
Treponema
Treponema denticola
true
Eubacteria
Spirochaetes
1
1
1
1
2,843,201
1
37.87
2,843,201
1
2,578
885,778
91.799314
100
0
0
281
yes
yes
yes
20
high
2,311,400
0
GGATTCAGGTGTACACGCAGCCCGCCAGGCCGTAAACTTTTTTTGCGATATAAAAAGCATGAGGGCCTCAAATTTTTTACCGGCACTTAACTCAATCCTGCCTAAGGATATAAGGGTGATGGATGCAGCTGAAGTGTCCCCCCTCCTGCA
104Treponema denticola ATCC 35405
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,544,950
1
GTCATGCAGCCACACCCTGCCCCATCCTAACCCCCCAAAATCACTCATCTCTGCTCTGCCACCATGGGTTGGTCTTTTTGAGAATGTCAGATGCAGGCTGGCTTCTTTCCCTCAGCCTGACACCCGTGAGAGCCGTCTGAGTTGGTGTAT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,933,350
1
ACCTCCAGCTGCGCAAGGCATGTGCATTATCTTCAGCACCTGTCACTTTCACAGGGACATGAGCCATTGAAGGATTGATTTGGAAACCAAAATCAGCTTGGGGAAAGGGCAATTAAACTGTGGATGACGGTTTGTTGCATGTTTTCTTGC
120homo sapiens
G000007345
ASM734v1
GCF_000007345.1
PRJNA224116
SAMN03081414
null
2002/04/03
Broad Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/345/GCF_000007345.1_ASM734v1
638,154,508
RS_GCF_000007345.1
Monoisolate
Complete Genome
Full
representative genome
Major
188,937
2,214
Methanosarcina acetivorans C2A
strain=C2A
null
Archaea
Euryarchaeota
Methanomicrobia
Methanosarcinales
Methanosarcinaceae
Methanosarcina
Methanosarcina acetivorans
true
Archaea
Euryarchaeota
0.98
1
0.8
0.9
5,751,492
1
42.68
5,751,492
1
4,884
1,470,904
75.340086
99.84
0.03
0
229
no
yes
yes
18
medium
248,950
0
CCGGGCAAAAGTCCTGGAAATAGGTTTGTTGTCCTGAGACTAATCGTCCTGTATCTATGTTATTCTGATGCCTATATCAGTCCAATGTCTACGTCAGTTTGATGTCTATGCCAGTTTGATCTTTATGTAATAATCCGTGTATTTGCTATA
61Methanosarcina acetivorans C2A
G000010405
ASM1040v1
GCF_000010405.1
PRJNA224116
SAMD00060908
null
2007/05/08
Japan Agency for Maine-Earth Science and Technology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/405/GCF_000010405.1_ASM1040v1
640,427,107
RS_GCF_000010405.1
Monoisolate
Complete Genome
Full
representative genome
Major
412,965
410,330
Candidatus Vesicomyosocius okutanii HA
strain=HA
null
Bacteria
Proteobacteria
Gammaproteobacteria
null
null
null
Calyptogena okutanii thioautotrophic gill symbiont
true
Eubacteria
Proteobacteria
1
1
1
1
1,022,154
1
31.59
1,022,154
1
976
297,702
85.803803
93.54
0
0
271
yes
yes
yes
20
high
592,670
0
AATTTTTCACTTCTGTCGGTTATATAATCAGCATCAAAAATAAGAGTTTGTTTTGGTAAATATTGCAAAACTAATTCACGCAATACACAAATATCATTTTTTTTAAATGCTGACAATGGAAATAAATCTGTTGGTTGATATTTTTGAAAA
20Candidatus Vesicomyosocius okutanii HA
G000009765
ASM976v2
GCF_000009765.2
PRJNA224116
SAMD00061088
null
2016/03/24
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2
637,000,304
RS_GCF_000009765.2
Monoisolate
Complete Genome
Full
representative genome
Minor
227,882
33,903
Streptomyces avermitilis MA-4680 = NBRC 14893
strain=MA-4680
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces avermitilis
true
Eubacteria
Actinobacteria
1
0.999
1
1
9,119,895
2
70.7
9,025,608
1
7,915
2,675,970
86.456522
99.89
0.79
0
356
yes
yes
yes
20
high
1,138,280
0
CGGCGCGCTCGTCTCCGTCGCCGCCACGCCGGATGAGCTCCTGCCCCGAATCGCTCCGTGGACCGAGGACAACCCGGCGCGGCTCGCCGTCGCAGCCGTCAACGGACCCCGGAGCACAGTCGTTTCCGGTGCCCGCGAGGCCGTCGCGGA
95Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,646,100
1
TTCTCTATCCAAGTATCCAAGGAGCATTGGCCCAGCAGTGAGGGGAAGATGCTGTTTTGAATAGGAGCAAGTTCAAGTGCCAAGTTCAGCAAGGCTGAGGATTGAGCACCAGTTTCTGCTCTATCAGTGTTCTGGCAAGTGCAGTGTCAG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,853,700
1
CTACCTGCTCTCTGTTTATTCACAGAGTTGTTGGGAGAAGGCAGGGAGGAAATGCACGTAAAGCTACTTTGAGAAAGATAAGGGGCTCTAGCTGAATGAGTGTTTGTCTCGTCCTGTCCATCTCATGGAAGTCCATCAGCTGCAAGTCAA
120homo sapiens
G000006745
ASM674v1
GCF_000006745.1
PRJNA57623
SAMN02603969
null
2001/01/09
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/745/GCF_000006745.1_ASM674v1
637,000,333
RS_GCF_000006745.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,277
666
Vibrio cholerae O1 biovar El Tor str. N16961
strain=N16961
null
Bacteria
Proteobacteria
Gammaproteobacteria
Vibrionales
Vibrionaceae
Vibrio
Vibrio cholerae
true
Eubacteria
Proteobacteria
1
0.998
0.9
1
4,033,464
2
47.49
2,961,149
1
3,594
1,184,587
86.533164
99.86
0.03
0
360
yes
yes
yes
20
high
36,010
0
ACTTGAAGCTGCAGCGGTGTTTGCTACGCTCGTTCACCCCAATCACATAGTTTGCCTATGCTCATGGGGATTCACTTACTTGCCGCCTACCTGCAACTCCAAGTTGTTTGGGTATATCAGCAGAATTATTTGTCAGCAGAATTATTTGAT
107Vibrio cholerae O1 biovar El Tor str. N16961
G000011025
ASM1102v1
GCF_000011025.1
PRJNA224116
SAMD00060968
null
2010/01/05
Department of Bacteriology, Osaka Dental University
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/025/GCF_000011025.1_ASM1102v1
646,311,951
RS_GCF_000011025.1
Monoisolate
Complete Genome
Full
representative genome
Major
680,646
43,675
Rothia mucilaginosa DY-18
strain=DY-18
null
Bacteria
Actinobacteria
Actinobacteria
Micrococcales
Micrococcaceae
Rothia
Rothia mucilaginosa
true
Eubacteria
Actinobacteria
1
1
1
1
2,264,603
1
59.62
2,264,603
1
1,722
637,843
83.000906
99.33
0
0
293
yes
yes
yes
20
high
844,350
0
TGGTGCGTTACGGCGGGTTCCTCTGGGTGTACCATTCCTTCTCCCACGTGGTTGCCGACGGGTTCGCCGCGTTTAACGGCCTATCCCGCGTGGCGGCGATATACCGTGCCCTGTTCGCCGGTCAGCCGGTTCCGGCAACCCGCCGCATGA
84Rothia mucilaginosa DY-18
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,098,950
1
CAACAAAATGAAATTTTAAAAATGAAATTAGATAGGAAATATCTTGTAATATTTCAAGCCTCTACCCTATTTAACATAAGACTCTAAGAATGCCCGGGCACCGTGGCGCATGCCTGGAATCCCAGCACTTTGGGAGGCAGAGGCAGGTGG
120homo sapiens
G000010345
ASM1034v1
GCF_000010345.1
PRJNA224116
SAMD00060915
null
2007/07/11
Japan Agency for Marine-Earth Science and Technology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/345/GCF_000010345.1_ASM1034v1
640,753,056
RS_GCF_000010345.1
Monoisolate
Complete Genome
Full
na
Major
387,093
387,093
Sulfurovum sp. NBC37-1
strain=NBC37-1
null
Bacteria
Proteobacteria
Epsilonproteobacteria
null
null
Sulfurovum
Sulfurovum sp. NBC37-1
true
Eubacteria
Proteobacteria
1
1
0.9
1
2,562,277
1
43.87
2,562,277
1
2,552
795,482
91.463999
99.59
0.61
0
334
yes
yes
yes
20
high
646,100
0
TGGAACCGAAACTGTACGTTCCCCAGCCTACGAAACCCGCACCTATAAATGCGATGGTTGCTACCCATATGGTCCATACGAGATATTTATTGTGTTTTTGCATCCAGCTAATCATACTTCATCTACCTTCTATCGAAAAATTTGTATAAT
98Sulfurovum sp. NBC37-1 ASM1034v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,864,900
1
GTTTCTCCATGTTGGCCAGGCTGGCCTCAAACCCCTGACCTCAGGTGATCCGCCTACCTCTGCCTTCCAAAGTGCTGGGATTATAGACGTGAGCCACTGTGCCTAGCCAGGAGTATTTTTTTTTATTGTGGCCACATGTTATACCTTTTT
120homo sapiens
G000010565
ASM1056v1
GCA_000010565.1
PRJDA19023
SAMD00060921
null
2007/05/07
Marine Biotechnology Institute Co., Ltd
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/565/GCA_000010565.1_ASM1056v1
640,427,128
GB_GCA_000010565.1
Monoisolate
Complete Genome
Full
na
Major
370,438
110,500
Pelotomaculum thermopropionicum SI
strain=SI
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Peptococcaceae
Pelotomaculum
Pelotomaculum thermopropionicum
true
Eubacteria
Firmicutes
0.98
1
1
1
3,025,375
1
52.96
3,025,375
1
3,001
887,464
86.415667
100
0.63
0
331
yes
yes
yes
20
high
190,580
0
TTTTTTATACAAGCAGAAAATAGCTACTTGATGTAGAATAAACAACTGATAATGTAGAATAATTATAGATGTTGAATAACAATAGATTGAATAATTGACCAATTTCACATCCTCCGCCTACGGCCAGGTCCGGTTACGGCGGCTCATTTT
73Pelotomaculum thermopropionicum SI
G000010665
ASM1066v1
GCF_000010665.1
PRJNA224116
SAMD00060954
null
2009/06/11
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/665/GCF_000010665.1_ASM1066v1
644,736,352
RS_GCF_000010665.1
Monoisolate
Complete Genome
Full
representative genome
Major
573,370
184,917
Desulfovibrio magneticus RS-1
strain=RS-1
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfovibrionales
Desulfovibrionaceae
Desulfovibrio
Desulfovibrio magneticus
true
Eubacteria
Proteobacteria
0.99
0.996
1
1
5,315,620
3
62.67
5,248,049
1
4,555
1,546,858
85.744052
100
0
0
357
yes
yes
yes
20
high
4,545,450
0
CACCCTGCTCACCTTTCTCAAGTTCTGGCGCGAGGAGCGGCAAAAGCGTTTCCTGCACGGGGCCTTTTCGCGCTATGTGGCCCCGGCCGTGGTGGCCCGCATCGTGGCCCGGCCCAAAGACCTGCGCCTGACCGGCGAAGAGCGCGACGT
36Desulfovibrio magneticus RS-1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,999,500
1
TCCAAATCCAGGATCCGCATTCGAACCCTTGCTTCAGGCTCTGCTTTCCAGGTGATGCAAAGACTCATGTAAATGGTTTGATGGATGTTGCAGAGACAAATGCAAGTGCTCAGCCAGGTCTCCAGCTCAAGAAACATCTCAGGAAGGAGT
120homo sapiens
G000010085
ASM1008v1
GCF_000010085.1
PRJNA224116
SAMD00061079
null
2006/01/10
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/085/GCF_000010085.1_ASM1008v1
637,000,270
RS_GCF_000010085.1
Monoisolate
Complete Genome
Full
representative genome
Major
343,509
63,612
Sodalis glossinidius str. 'morsitans'
strain=morsitans
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Pectobacteriaceae
Sodalis
Sodalis glossinidius
true
Eubacteria
Proteobacteria
1
0.993
1
1
4,292,502
4
54.5
4,171,146
1
5,742
1,142,020
78.310831
100
0
0
357
yes
yes
yes
20
high
2,094,950
0
GCTGCAAGATTTCGCGCCGAGTGAAATCCGGCGCATGCACCGCATCCAGTGCCTGTAGCGAAGGCAATAGCGCATCATCGCGGCGTTGGGAGAGTAAACAGTACAAATAGAGAGGGCCGCCGGCTTTGGGACCCGTTCCCGATAACCCTT
87Sodalis glossinidius str. 'morsitans' morsitans
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,231,250
1
TCACTTTACTAAGCAAATGAACAGTAGTGTCTGTGGCCAAAAATAATAAGACTTAAAATTTTGAGTCCTTCCAAAAGAACTTGTATTAAATCTTTGGAATAGAAAAAAAAAGTTCATATTAGGGAGTAGATCTGGGTATTGAAAGGCCTG
120homo sapiens
G000010165
ASM1016v1
GCF_000010165.1
PRJNA224116
SAMD00060942
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
643,692,011
RS_GCF_000010165.1
Monoisolate
Complete Genome
Full
representative genome
Major
358,681
1,393
Brevibacillus brevis NBRC 100599
strain=NBRC 100599 (= 47)
null
Bacteria
Firmicutes
Bacilli
Bacillales
Paenibacillaceae
Brevibacillus
Brevibacillus brevis
true
Eubacteria
Firmicutes
1
1
1
1
6,296,436
1
47.27
6,296,436
1
5,917
1,875,522
87.757979
99.73
0.27
0
381
yes
yes
yes
20
high
2,377,310
0
TCATCAGTTCTACCTTTGCTGCATCGGTTTTGGCTGGCTCACTTGCTTGTGGTGCGGTTTGTGTTGTCGAGCAAGCCGTTAGCATTAAGCAAAATACTGTCAATATGGCAAACCAGTGCTTCTTCATAAAAAAAGACCTCCATAATTATA
15Brevibacillus brevis NBRC 100599
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,207,150
1
AAGAAATATCCGTTTAATAGGTCAGGTTTGCATTGCCCTCCTGTCTAAATGTATGGCCAGGCTGTTGACCACCACCCACAAGGGGAGGGTGAACTGGCACCCAAAGCCCTGCACAGATACAGGGGGTTTTACCACTGTTCAAGTCTCCCA
120homo sapiens
G000009205
ASM920v1
GCF_000009205.1
PRJNA57679
SAMEA1705932
null
2006/09/20
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/205/GCF_000009205.1_ASM920v1
640,069,308
RS_GCF_000009205.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,563
1,496
Clostridioides difficile 630
strain=630
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Peptostreptococcaceae
Clostridioides
Clostridioides difficile
true
Eubacteria
Firmicutes
1
0.998
0.9
1
4,298,133
2
29.06
4,290,252
1
3,829
1,209,268
82.891874
99.51
0.37
0
340
yes
yes
yes
20
high
2,560,870
0
CAATAATTGTTTTTGACCTTGAGAAACATTACTTGCTTCTTCATTTAATTTCATCTTATATCCATCTGGTAATGTCTTAATAAATCTATGAACATGTGCAGATTTAGCAGCCTCTATAACTTCTTCATCTGTAGCATTCAACTTACCATA
28Clostridioides difficile 630 ASM920v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,690,350
1
TGCAGACAGAGAAACAGGATTAGGACCAGGTAAGGTTTCTCTTGAGGAAGCTTGAGGTTGGGTATGTAGGCTGTCACGACAGGCCAAGAGTGAGACCAGTGACACCACAGTACTTCAAGCTCTCTGCAGATATTCTGTTCCGAAGCTGGA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,762,300
1
GTATCTGTGGGCCCATATCAAGACAACAAAATGGATGCTGAGACAGCAGAGTAATATTAAGTCTCAATGTTGTTTCTTCTCTCTGTTTCTCTCAGTTAGGCTGGCTAGAGATTTTTGTGTATTGATCTTGTATCTGGCAACTTTGCTGAA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,766,900
1
AATCCCACAGGACACACATGTGCTCTTTAGTGGGGGAGGCAGTTCAGTGACGATGACAGCAGTAATGACAACACACAGAAAACATGAGGGTGTGCGAGCATGGGGTCCCAGGGACGACACCTGCGGGGTGCTGCCACGATGGTGCTGGGA
120homo sapiens
G000007705
ASM770v1
GCF_000007705.1
PRJNA224116
SAMN02603528
null
2003/08/22
LNCC, Brazil
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/705/GCF_000007705.1_ASM770v1
637,000,074
RS_GCF_000007705.1
Monoisolate
Complete Genome
Full
representative genome
Major
243,365
536
Chromobacterium violaceum ATCC 12472
strain=ATCC 12472
null
Bacteria
Proteobacteria
Betaproteobacteria
Neisseriales
Chromobacteriaceae
Chromobacterium
Chromobacterium violaceum
true
Eubacteria
Proteobacteria
1
1
0.9
1
4,751,080
1
64.83
4,751,080
1
4,298
1,428,392
88.582238
99.04
0.45
0
372
yes
yes
yes
20
high
565,760
0
TGGATGTCCCAGGTGCGGCGGTTGGGCAGCTGGGTCAGCTCGTCGGTGCCTGCCAGGGCTTCCAGCTTTTGCATCAGGCTGCGCATTTGCCCCAGCCATTTGTGCAGCAGCCGCACCAGCAGGATGGCCATCGCGCTGGCGATGATCCAC
27Chromobacterium violaceum ATCC 12472
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,626,850
1
TTCCCAGTGAGCCCCTGAGCTTCTCCATAGAAGAGGTAGGGGCACCAAAAATGGAATTGTCTTAGAGTGCCAAGGGCAGCCGTCAGAACACCTGCAACATTAAAAGTCTGCAGCCACTACCCGCCAGTCATAACCCGAGACTGAAACTGC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,078,400
1
GTAGCCATATGGTAATGATTCATAATCTTGCCAGTTAGCCAGCCCTCAAACACTGAGTATTGAGCAGAGCTGAAGAAAGGGTTTCCATAACCAGGTAAGGCCACCAGGATTGGCTCTGACTGGGTGGCACCCATTTGAAGTATTTTACAA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,284,200
1
CTTTTATGGATTATGCTTCTTGAAACAAAGTCTAAGAGCTCTTTGCCTGGCCCTATATCTCAAAGCTTTTGTCCTAGGTTTTTTCCTAAGTTTCATAGTTTACATCTAGGTTCATGATCCATTTTTAGCTAATTTTTGCATAAGGTGTGA
120homo sapiens
G000007565
ASM756v2
GCF_000007565.2
PRJNA57843
SAMN02603999
null
2016/02/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
637,000,222
RS_GCF_000007565.2
Multiisolate
Complete Genome
Full
reference genome
Major
160,488
303
Pseudomonas putida KT2440
strain=KT2440
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas putida
true
Eubacteria
Proteobacteria
1
1
0.9
1
6,181,873
1
61.52
6,181,873
1
5,584
1,861,131
88.706707
99.97
1.2
0
381
yes
yes
yes
20
high
279,630
0
GTGCGCAAGGATGCTGCACAGCACCCAGTAGATGACCGCGACCGCCACGTACATGGTGAACACTTCGAACGTGCGCGCGGTAATCAGCTGGGCTTGGCGGAACAGCTCGGGCACCTGGATGGTCGCCGCCAGGGCGGTGTCCTTTACCAG
78Pseudomonas putida KT2440
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,262,000
1
ATCCTCAGCTTTCCTGGAAGTTCATCCATTTGTCCATTCAACACACAGACAGTGTGCGCGTCCTCTGTGCCCAGCTCTGCCAGCAGCTGGGGATGTTTCGTGAAGATGGGAGGATTCAGTCCTGTTGGGGAAACAGCAGTGAAAACCCAG
120homo sapiens
G000008345
ASM834v1
GCF_000008345.1
PRJNA224116
SAMN02603281
null
2004/07/30
Goettingen Genomics Laboratory
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/345/GCF_000008345.1_ASM834v1
637,000,215
RS_GCF_000008345.1
Monoisolate
Complete Genome
Full
representative genome
Major
267,747
1,747
Propionibacterium acnes KPA171202
strain=KPA171202
null
Bacteria
Actinobacteria
Actinobacteria
Propionibacteriales
Propionibacteriaceae
Cutibacterium
Cutibacterium acnes
true
Eubacteria
Actinobacteria
1
1
1
1
2,560,265
1
60.01
2,560,265
1
2,373
780,330
89.799572
100
0
0
319
yes
yes
yes
20
high
71,240
0
CCGAGTAGGAGGCGATCGGGACGACGAAGATGCTCAACACCGGGAAAGGCACGAAGAAGAACTGGATCGCAGCCCCGATAGCGACCAAGGTCATCATGAGAAGAGGATGCTCGCGACGCATCGGCAGAGAGGCCACCATGACCATCGATG
77Propionibacterium acnes KPA171202
G000008505
ASM850v1
GCF_000008505.1
PRJNA58089
SAMN02598265
null
2004/12/27
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/505/GCF_000008505.1_ASM850v1
637,000,023
RS_GCF_000008505.1
Monoisolate
Complete Genome
Full
reference genome
Major
281,309
1,428
[Bacillus thuringiensis] serovar konkukian str. 97-27
strain=97-27
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus thuringiensis
true
Eubacteria
Firmicutes
1
0.998
1
1
5,314,794
2
35.37
5,237,682
1
5,361
1,516,528
84.049767
99.07
0.31
0
381
yes
yes
yes
20
high
2,258,620
0
TTTCAATATCGATATAATGACAAAGACTCAAAGAGAAAGGATGATGAATTTTGCCAACAACAAGAAAGGAAAACCTCCAATTTGGTATGATGATGTGCCTTGGGATGGTTATCGTAATGACGTTTTACAATTTACTAATGAATGGATCAG
118[Bacillus thuringiensis] serovar konkukian str. 97-27
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
6,569,940
0
GCCGAGCACCATGGCGAGAACCAGCGGCGCCAGCGGGTAGTCGAGCTTCTTGAACACATAGCCGAGGAGACCGAAGCCGATCACCATGAAGATGTCCGAGACGGAGTTCGCGACCTGGTAGGCCCCCGAGAAGATCACCGCGACGATGAT
86Sinorhizobium meliloti 1021
G000007565
ASM756v2
GCF_000007565.2
PRJNA57843
SAMN02603999
null
2016/02/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
637,000,222
RS_GCF_000007565.2
Multiisolate
Complete Genome
Full
reference genome
Major
160,488
303
Pseudomonas putida KT2440
strain=KT2440
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas putida
true
Eubacteria
Proteobacteria
1
1
0.9
1
6,181,873
1
61.52
6,181,873
1
5,584
1,861,131
88.706707
99.97
1.2
0
381
yes
yes
yes
20
high
5,490,810
0
GACCTGGCTGCGGTACTGCAATTGCTTGACCTTGATAGCGTCATGCAAGCCCGGACTTATCGAACTGATCACTTTTTCATGGGTGAAATAATTGGCATCGAACTGCTGAGTGGCCTGGGCACTTGAAAGATTCAGCGGCTGCCACAGCCA
78Pseudomonas putida KT2440
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,992,000
1
AGGGTTTGGTTCAAAGGCCGATGGGAATTAACCATAGGAAAAATAGTCCAATTTTATTAATAGTTGGAACTTCAGGCAAATCTCACTTGAATCTACATTTTTCTTTTTTAATATTAAGGGCTAATTCTCACTATAGGTCACATTAAGAAT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,284,150
1
TAATGTGCCTAGGTGTTGAGGGTTTTTTGTTTATATTTATGGTGCTTGGAGTCCTCTGAACTTCACAGACCTCTGGTTTGTTGTCTTTTACTAATGAAAAAATTCTCAACCATTAGCTCTTTGAATATTTCTTCTGCCCCATTTTCTTCC
120homo sapiens
G000008805
ASM880v1
GCF_000008805.1
PRJNA57817
SAMN02603997
null
2005/05/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/805/GCF_000008805.1_ASM880v1
637,000,189
RS_GCF_000008805.1
Monoisolate
Complete Genome
Full
reference genome
Major
122,586
487
Neisseria meningitidis MC58
strain=MC58
null
Bacteria
Proteobacteria
Betaproteobacteria
Neisseriales
Neisseriaceae
Neisseria
Neisseria meningitidis
true
Eubacteria
Proteobacteria
1
1
0.9
1
2,272,360
1
51.53
2,272,360
1
2,107
632,964
82.059313
99.75
1.9
80
322
yes
yes
yes
20
high
2,149,550
0
CGCCATCGGCTACGTCGGCCTGGCGGCAACCGTCTGGACAGGCATCATCCCCGCCATGCTGCTCTACCGTTCGCGCAAAAAATTCGGCGCAGGCAAAACCTATAAAGTTTACGGCGGCTTGTGGCTGATGGTTTGGGTCTTCCTTTTCGG
67Neisseria meningitidis MC58
G000007465
ASM746v2
GCF_000007465.2
PRJNA57947
SAMN02604090
null
2011/09/01
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/465/GCF_000007465.2_ASM746v2
637,000,288
RS_GCF_000007465.2
Monoisolate
Complete Genome
Full
reference genome
Major
210,007
1,309
Streptococcus mutans UA159
strain=UA159
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus mutans
true
Eubacteria
Firmicutes
1
1
0.9
1
2,032,925
1
36.83
2,032,925
1
1,897
591,301
85.692487
100
0
0
308
yes
yes
yes
20
high
988,780
0
ATTTTCTTGCAACCATATCAGGCAAAATTTGACGGGTTAAATAAGTCAGACCAATGATATTAGTCGCAATCATGGTTTCCCAATCCTTGAAATTAGCCTCATAAGCCTTATCAAGACCTAAAGCCAGTCCTGCATTGTTAACAAGGAGTT
92Streptococcus mutans UA159
G000006865
ASM686v1
GCF_000006865.1
PRJNA57671
SAMN02603339
null
2001/03/21
INRA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/865/GCF_000006865.1_ASM686v1
637,000,144
RS_GCF_000006865.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,623
1,358
Lactococcus lactis subsp. lactis Il1403
strain=IL1403
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Lactococcus
Lactococcus lactis
true
Eubacteria
Firmicutes
1
1
1
1
2,365,589
1
35.33
2,365,589
1
2,383
693,662
86.378488
100
0
0
310
yes
yes
yes
20
high
201,760
0
AAAATCCATAAACTTGGTGGAAAATTATTTGTCAATCCTGATGGATTGGAATGGAAAAGAACCAAGTGGGCAGCACCAATTCGTTCTTATTTGAAATTTGCTGAGAAAAAAATGGTGCGATATGCTGATTTGATTATTTCAGATAACGCA
54Lactococcus lactis subsp. lactis Il1403 IL1403
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,607,000
1
GGGATGTCAGTTGCTCCATCTACAAAAATAACAATTCAGTCCTCATGTGCAGGTGCTGGGAAAGATTCAATGAGGTACAACTGAATACACCGCCCTGGCTTTAAGGACATAGACTCATCCCAGCAACATCCACAGAGCCCCTGCTGGGGA
120homo sapiens
G000009705
ASM970v1
GCF_000009705.1
PRJNA224116
SAMD00061094
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1
637,000,199
RS_GCF_000009705.1
Monoisolate
Complete Genome
Full
representative genome
Major
103,690
103,690
Nostoc sp. PCC 7120
null
null
Bacteria
Cyanobacteria
null
Nostocales
Nostocaceae
Nostoc
Nostoc sp. PCC 7120
true
Eubacteria
Cyanobacteria
1
0.992
0.9
1
7,211,789
7
41.27
6,413,771
1
6,159
2,024,679
82.716938
99.19
0
0
360
yes
yes
yes
20
high
3,619,590
0
ATTAAAATTTCTGTCAAAAGCTTCTTCATCTTGGGCTAAATACCAAACCCCTTCAATAGCACTAGCTACCTTAGGAATAGGTGTCCAAGAAAGTAAAACATACAACAACCCCCAAAGTGGCTGTCCTAAATAAAACTTATGTAATCCAGA
70Nostoc sp. PCC 7120 ASM970v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,252,650
1
TATGAGAGAACCCTAGAAACGTAGCCTGGGATGGTTGGTAAAGAACAGTCCATTCTGTGTCACAACAAAGAGTTTACATTTTATTTTGTATGTTCAGGAGGAGGGATTTATTTTACCTTATTTTTATTTATTTATTTTTTTGAGACAGAG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,477,500
1
TGCAGGTGTGTGCCACCACACCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGCATTGGCCAGGATGGTCTCAAACTCCTGAACTCAGGTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGGCTTACAGGCGTGAGTCA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,803,700
1
TACTTACACAAACCCTGGAAGGTGTAAACTGCTCCACACCTAGACTGCGTTGTATAGCCTGTTGCTCCAAGGCTATAAACTTGTGTAGCATGCTACTGTACTGAATACTACAGGCAATTATAATAGGATGGTAAGTATTTGTATATCTAA
120homo sapiens
G000010605
ASM1060v1
GCF_000010605.1
PRJNA224116
SAMD00060929
null
2008/04/08
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
641,522,653
RS_GCF_000010605.1
Monoisolate
Complete Genome
Full
representative genome
Major
455,632
1,911
Streptomyces griseus subsp. griseus NBRC 13350
strain=NBRC 13350
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces griseus
true
Eubacteria
Actinobacteria
1
1
1
1
8,545,929
1
72.23
8,545,929
1
7,113
2,547,362
87.837226
99.84
0
0
357
yes
yes
yes
20
high
8,027,240
0
TCATCGAGGTGGTGCCCCTGCTGATCAGCTCCCTGGTCGCCGTCGCGGTCGCGGCGGTCGCCCTCGGTCTCGCGGACCTCCGGCTGGGCCTGCTGGTGATCGTGGGGACCGTCGCGATCCTGTCGGTCCTCGCCGTCATGTCCAAGCGGA
96Streptomyces griseus subsp. griseus NBRC 13350
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,637,400
1
TCCCATCTATCCATTCATGTATCATCCACCCATATATCCACCTATCTATCCCCCCTTTTGTCCATTTTTTATTAAATGTTATTCTGTGGACCAGAAATTGTGGTAGGCACACAGCAAGATGAGCAAGAAAGACACCATCTCTGCCCTCAG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,543,000
1
TGGTCTGGGTGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGGATGCTGAGGCAGGTGGATCATGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAGCCCCACCTCTACTAAAAATACAAAAAATTAGCTGGGCATGATG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,855,100
1
AGCATTGTTCTAGGCAGGGGGTTGCAGCTCGACCAAGACAGACTGCAGGGCGGTCATCAGCCATTATTGCCTCTTGGGCCGGGACTGTCCTCTGTGTCTGTGTCGCCTCCTCCATCCCAGCCAGATGGCTGAAAGCTCCCGGGGACTTTG
120homo sapiens
G000007565
ASM756v2
GCF_000007565.2
PRJNA57843
SAMN02603999
null
2016/02/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
637,000,222
RS_GCF_000007565.2
Multiisolate
Complete Genome
Full
reference genome
Major
160,488
303
Pseudomonas putida KT2440
strain=KT2440
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas putida
true
Eubacteria
Proteobacteria
1
1
0.9
1
6,181,873
1
61.52
6,181,873
1
5,584
1,861,131
88.706707
99.97
1.2
0
381
yes
yes
yes
20
high
3,397,680
0
AGGCGGGAAGGGCATGAACATCACCGCCCCGTTCAAGCTGCGTGCCTTCGAGCTGGCCGACCGGCGCAGCGAGCGGGCGCAATTGGCACGGGCGGCCAATGCGCTGAAGTTCGAGGATGGCCGCATCGTCGCCGAAAACTTCGATGGCAT
78Pseudomonas putida KT2440
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,566,600
1
CGTAAGAGGAATCTCAAAGCACTCACTCATTTATTCAACCAGTACTGACAAACTGCACCTGCATGCCAGGCACTGTCCTACCACTCACTGAGTGTGCATTGGTGAACAAAATGGGTCTAACCCTTGCCTCTGTGAAACTTACAGTCTAAT
120homo sapiens
G000006605
ASM660v1
GCF_000006605.1
PRJNA224116
SAMEA3283089
null
2005/06/27
Bielefeld Univ
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/605/GCF_000006605.1_ASM660v1
637,000,085
RS_GCF_000006605.1
Monoisolate
Complete Genome
Full
representative genome
Major
306,537
38,289
Corynebacterium jeikeium K411
strain=K411 = NCTC 11915
null
Bacteria
Actinobacteria
Actinobacteria
Corynebacteriales
Corynebacteriaceae
Corynebacterium
Corynebacterium jeikeium
true
Eubacteria
Actinobacteria
1
0.996
1
1
2,476,822
2
61.35
2,462,499
1
2,137
751,284
89.378688
100
0.68
0
319
yes
yes
yes
20
high
293,670
0
CCTCCCGCGGCGTGGACGTTTCCACCTTGGGTGCGAAGTGCCGCATGATCCTGCCGCTGATCGTCGGCATGGTGGACGATGCTGCCACCCGCGCCCGCCCGCTGCAGCGCACCGGCATCGGCGAGCCCGGCCCGCGTACCGTACTGCGCC
31Corynebacterium jeikeium K411 K411 = NCTC 11915
G000007565
ASM756v2
GCF_000007565.2
PRJNA57843
SAMN02603999
null
2016/02/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
637,000,222
RS_GCF_000007565.2
Multiisolate
Complete Genome
Full
reference genome
Major
160,488
303
Pseudomonas putida KT2440
strain=KT2440
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas putida
true
Eubacteria
Proteobacteria
1
1
0.9
1
6,181,873
1
61.52
6,181,873
1
5,584
1,861,131
88.706707
99.97
1.2
0
381
yes
yes
yes
20
high
3,643,120
0
CCCGACATGGCGCGCGGCGCCGCCGCGCAGGCCAGTGAGGATGGCGCTGGCGTTACGGATCAGCCAGCTGTTGGTGTGATTCATGTTCGTCTCCATAGCCAGTACGGCGTTTCGCATGGAAGTCAGCCCAGTTCGCTTTCGTGCCAGTGG
78Pseudomonas putida KT2440
G000010525
ASM1052v1
GCF_000010525.1
PRJNA224116
SAMD00060925
null
2007/10/16
University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/525/GCF_000010525.1_ASM1052v1
641,228,476
RS_GCF_000010525.1
Monoisolate
Complete Genome
Full
representative genome
Major
438,753
7
Azorhizobium caulinodans ORS 571
strain=ORS 571
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Xanthobacteraceae
Azorhizobium
Azorhizobium caulinodans
true
Eubacteria
Proteobacteria
1
1
0.9
1
5,369,772
1
67.32
5,369,772
1
4,810
1,620,542
88.922714
100
0
0
358
yes
yes
yes
20
high
114,790
0
AGCCGCTCTCGCGGGTGGTGGGCATGGGCACCACTTCGCAGCCGGCGAGTTCCGCACCGGCGCGGTAGGCGGCATAGAGCGGGTTCGGCACGAGGACGATGGGCGCGCCCTTGCGCTCCGGCCCCCGGCGGCGGGCGATGAAGGTGGCGC
4Azorhizobium caulinodans ORS 571