#genome
stringclasses
121 values
asm_name
stringclasses
120 values
assembly_accession
stringclasses
120 values
bioproject
stringclasses
45 values
biosample
stringclasses
120 values
wgs_master
float64
seq_rel_date
stringclasses
98 values
submitter
stringclasses
76 values
ftp_path
stringclasses
120 values
img_id
float64
637M
2.51B
gtdb_id
stringclasses
120 values
scope
stringclasses
3 values
assembly_level
stringclasses
1 value
genome_rep
stringclasses
1 value
refseq_category
stringclasses
3 values
release_type
stringclasses
2 values
taxid
float64
1.15k
681k
species_taxid
float64
7
911k
organism_name
stringclasses
120 values
infraspecific_name
stringclasses
112 values
isolate
stringclasses
1 value
superkingdom
stringclasses
2 values
phylum
stringclasses
18 values
class
stringclasses
30 values
order
stringclasses
56 values
family
stringclasses
75 values
genus
stringclasses
89 values
species
stringclasses
117 values
classified
bool
1 class
lv1_group
stringclasses
2 values
lv2_group
stringclasses
13 values
score_faa
float64
0.93
1
score_fna
float64
0.88
1
score_rrna
float64
0.1
1
score_trna
float64
0.6
1
total_length
float64
618k
9.12M
contigs
float64
1
22
gc
float64
22.5
72.2
n50
float64
616k
9.03M
l50
float64
1
1
proteins
float64
525
7.92k
protein_length
float64
172k
2.68M
coding_density
float64
74
96.9
completeness
float64
76.3
100
contamination
float64
0
4.4
strain_heterogeneity
float64
0
100
markers
float64
124
383
5s_rrna
stringclasses
2 values
16s_rrna
stringclasses
1 value
23s_rrna
stringclasses
1 value
trnas
float64
14
20
draft_quality
stringclasses
2 values
start_position
int64
0
10M
human_label
int64
0
1
autotrain_text
stringlengths
150
150
autotrain_label
class label
121 classes
G000010305
ASM1030v1
GCF_000010305.1
PRJNA224116
SAMD00060909
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/305/GCF_000010305.1_ASM1030v1
643,692,024
RS_GCF_000010305.1
Monoisolate
Complete Genome
Full
representative genome
Major
379,066
173,480
Gemmatimonas aurantiaca T-27
strain=T-27
null
Bacteria
Gemmatimonadetes
Gemmatimonadetes
Gemmatimonadales
Gemmatimonadaceae
Gemmatimonas
Gemmatimonas aurantiaca
true
Eubacteria
FCB
1
1
1
1
4,636,964
1
64.27
4,636,964
1
4,004
1,466,180
93.177023
98.9
4.4
0
353
yes
yes
yes
20
high
4,254,250
0
GCGGTGATCGATCGCTGCCTGCGCAAACGCCCCGACGATCGGTTTGCGACAGGCGAAGAACTCGCCGATGCACTCGCCAAAGCGCTGGAGCATATCGAGCACGACGTGCGTGATGCCGGCGGCAAGGATACGCTGAACAGTGACGACGCG
42Gemmatimonas aurantiaca T-27
G000007985
ASM798v2
GCF_000007985.2
PRJNA57743
SAMN02603989
null
2012/07/31
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/985/GCF_000007985.2_ASM798v2
637,000,120
RS_GCF_000007985.2
Monoisolate
Complete Genome
Full
reference genome
Major
243,231
35,554
Geobacter sulfurreducens PCA
strain=PCA
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfuromonadales
Geobacteraceae
Geobacter
Geobacter sulfurreducens
true
Eubacteria
Proteobacteria
1
1
1
1
3,814,128
1
60.94
3,814,128
1
3,417
1,176,369
90.878544
99.35
0
0
363
yes
yes
yes
20
high
1,452,490
0
GGACCCTGAGTTGCGGGCCCCCGGCCACGAACCGCTCCGGGAGGAGCTGGCGCGGCGCTGGGGCGGCCGGCTGGAACTGGCCGGGGTGGCCTGAGGAGCGAGACCATGACTGACTATGTATCGTTTTCCGCGTTTCTGGCGGAGTCCCCC
43Geobacter sulfurreducens PCA
G000010625
ASM1062v1
GCF_000010625.1
PRJNA224116
SAMD00060936
null
2008/01/24
Kazusa DNA Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/625/GCF_000010625.1_ASM1062v1
641,522,640
RS_GCF_000010625.1
Monoisolate
Complete Genome
Full
representative genome
Major
449,447
1,126
Microcystis aeruginosa NIES-843
strain=NIES-843
null
Bacteria
Cyanobacteria
null
Chroococcales
Microcystaceae
Microcystis
Microcystis aeruginosa
true
Eubacteria
Cyanobacteria
1
1
0.9
1
5,842,795
1
42.33
5,842,795
1
5,605
1,591,543
80.239081
99.89
0.51
25
350
yes
yes
yes
20
high
2,119,650
0
TAGTCTAACCGGATTTGGTCTGATTTTTACAGGAGTCATTTCAGCCGACAGTAATCAGTCAAGGGAAAAGACAGCACTGTTACTCGCACCTAATACCTGTCACTTAACAATCTCGCCAATCTGTTGACTATCTAAATTACTCGTTAAGAC
64Microcystis aeruginosa NIES-843
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,329,150
1
TGTGCAATCTAGCAATGCATTGCTAGACGTTTACCTAAGAGAAATGAAAATGCATGTCCACAGAGATGTGCTCACAGATGCTCAATGCCGCTTTATTCATGATAGCACAAACTGGGAAAGAGCCAGATGTTCATCCTCAGGTGAAATAAT
120homo sapiens
G000009065
ASM906v1
GCF_000009065.1
PRJNA57621
SAMEA1705942
null
2003/05/06
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/065/GCF_000009065.1_ASM906v1
637,000,351
RS_GCF_000009065.1
Monoisolate
Complete Genome
Full
reference genome
Major
214,092
632
Yersinia pestis CO92
strain=CO92
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia pestis
true
Eubacteria
Proteobacteria
1
0.994
1
1
4,829,855
4
47.64
4,653,728
1
4,298
1,371,586
83.669593
99.82
0
0
372
yes
yes
yes
20
high
1,897,740
0
AGCATCAGGTGGTCGTGAAAAATCTGGAAAGTAACTATCGGAAAGTGCCGGGTATTTCTGCCGCCACCATTTTGGGTGATGGTAGCGTCGCGCTAATCGTTGATGTGTCAGCGTTGCAGGCCTTAAACCGTGAAAAACGCGTCGCGGCTG
116Yersinia pestis CO92 ASM906v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,694,100
1
GGGCAGGGGAGCCCCATGAGAGGAGCACCCAAGATCCAGATGCTGCACCAGCTGCAGACGCTCCCCTTGTTTGGAAGATAAGAAATTATAAAGACCATTTTCCCAAAGAATCAGTAGCTTCCGTCTTAATGAAGGCTGAAATCTAAATGA
120homo sapiens
G000010625
ASM1062v1
GCF_000010625.1
PRJNA224116
SAMD00060936
null
2008/01/24
Kazusa DNA Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/625/GCF_000010625.1_ASM1062v1
641,522,640
RS_GCF_000010625.1
Monoisolate
Complete Genome
Full
representative genome
Major
449,447
1,126
Microcystis aeruginosa NIES-843
strain=NIES-843
null
Bacteria
Cyanobacteria
null
Chroococcales
Microcystaceae
Microcystis
Microcystis aeruginosa
true
Eubacteria
Cyanobacteria
1
1
0.9
1
5,842,795
1
42.33
5,842,795
1
5,605
1,591,543
80.239081
99.89
0.51
25
350
yes
yes
yes
20
high
5,136,820
0
TGAACACGATAAAGAATGTAGCCAACTTCATCAACAACCTCTTCAGGAAATTCTAATAGCTCCTTTTTTGATGCTCCAATCCAGATAACAGTTTTCAGTTGTTTATCTACCATTTTTTTGAAAAAATGTGACAAATACAAATAAAAAGCT
64Microcystis aeruginosa NIES-843
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,139,950
1
CCGGGCCTCGCCTCCGCGTCCCCTCCGCGGACCTCCGCGTCCTCCCCGCGCCCTTTCCCCAGGGCCGTTGCGCCTATTTCTCTCCCCCGGGCCGCCCCTCTCCGGCCTCGCGTCGACCTGGGACCTGTCGGCGCCCCCAGCCCCTCCCCG
120homo sapiens
G000009765
ASM976v2
GCF_000009765.2
PRJNA224116
SAMD00061088
null
2016/03/24
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2
637,000,304
RS_GCF_000009765.2
Monoisolate
Complete Genome
Full
representative genome
Minor
227,882
33,903
Streptomyces avermitilis MA-4680 = NBRC 14893
strain=MA-4680
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces avermitilis
true
Eubacteria
Actinobacteria
1
0.999
1
1
9,119,895
2
70.7
9,025,608
1
7,915
2,675,970
86.456522
99.89
0.79
0
356
yes
yes
yes
20
high
4,887,610
0
TTCCTCATGGACGAGCCGCTGTCCAACCTCGACGCCAAGCTCCGCGTGTCGACGCGTACGCAGATCGCCTCGCTCCAGCGCCGCCTCGGCATCACCACCGTGTACGTCACCCACGACCAGGTCGAGGCCATGACCATGGGCGACCGCGTG
95Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,217,750
1
CTGACAGCCCGGAGCAGCACCCACACCCCCAGGGGAGCATCTGACCGCATGGAGCAGCACCCACACCCCCAGGGGAGCATCTGAAATCCTGGAGCTGCACCGACAACACCAGGTGAGCATCTGAGAGCCTGGAACAGCACCCGCACCCCC
120homo sapiens
G000006845
ASM684v1
GCF_000006845.1
PRJNA57611
SAMN02604088
null
2005/02/14
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/845/GCF_000006845.1_ASM684v1
637,000,188
RS_GCF_000006845.1
Monoisolate
Complete Genome
Full
reference genome
Major
242,231
485
Neisseria gonorrhoeae FA 1090
strain=FA 1090
null
Bacteria
Proteobacteria
Betaproteobacteria
Neisseriales
Neisseriaceae
Neisseria
Neisseria gonorrhoeae
true
Eubacteria
Proteobacteria
1
1
1
1
2,153,922
1
52.69
2,153,922
1
2,142
609,210
83.31778
99.82
0.21
0
323
yes
yes
yes
20
high
1,733,940
0
GACAATATGCCGACCAGTCAGGGGCACAAAGGGCAGTTCGGCGGACGCAACTCGCCTACCGCATTGAATGCTGCGCTGCTGGGCAGCCAGTTTTGGGACGGACGTGCCGCCGATGTTGAAGAACAGGCTGGCGGGCCTTTGGTGAATCCG
66Neisseria gonorrhoeae FA 1090
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,340,550
1
AAAATCTCTAGGGTGCATGAAATACCTGCCACGTTCTTGGAAAAAGTATAATATATAGTTAGTTTGTTCTCTGTATTCTAAACTGGGCATAAAGAACTAGAGTTTATTTTCCTGTTTTAAAAAATTAATTATACTATGGCTTTTTAACAA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,209,400
1
CAGCCGTCCTGGACCGCCTTCTCCACCTTTGGGCTCCTGCTCCAATGTCCGCTTATCACCGAGGGCCATCGGAGGTGGCACGCCCCGTGACTGCCTCCCCCTCCCTGTACCCTGCACTGCACGTGTCATAATTCAAGTTCTCGGCTCAGC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,906,800
1
TAATCCCTAAAGGAGCCTGGCACTGTCAGCGGGCTCTGCTGCTAATCGTTAAATATCACCTCTGTGGTCTCTGAGTGCAGCAGGGAGAATGATGATCTGCTTGAAGGCACACGCAGAGAAGTGGAATTCTGAAATCTCAGCCTCCTACGT
120homo sapiens
G000010165
ASM1016v1
GCF_000010165.1
PRJNA224116
SAMD00060942
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
643,692,011
RS_GCF_000010165.1
Monoisolate
Complete Genome
Full
representative genome
Major
358,681
1,393
Brevibacillus brevis NBRC 100599
strain=NBRC 100599 (= 47)
null
Bacteria
Firmicutes
Bacilli
Bacillales
Paenibacillaceae
Brevibacillus
Brevibacillus brevis
true
Eubacteria
Firmicutes
1
1
1
1
6,296,436
1
47.27
6,296,436
1
5,917
1,875,522
87.757979
99.73
0.27
0
381
yes
yes
yes
20
high
1,496,560
0
CACGCTCTGAGTACGTATCGCCGGTGTGAAAGACGACAGGCACCTGGTATTTGGCAGCGAGTGCATAGACGGGATCGTAGACGCTATCATAGGCGTAGAAGGGATAGTAGCCCAAATAGATTTTTAACCCGACCACGTTGGGTTTTTGCA
15Brevibacillus brevis NBRC 100599
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,662,350
1
TCAGGGGGCTCTGGGCGGCCCCTCGCCCCGGGAAGCTCTGGGGTCTGGCGGCCAGCGCCACCTACCTTGGACTGGTTGTTCTTGAGGCGGTGGGCCTCATCTACCACCAGGCAGGCCCACTCGATGGAGCCCAGGATGGCCTGGTCAATG
120homo sapiens
G000009765
ASM976v2
GCF_000009765.2
PRJNA224116
SAMD00061088
null
2016/03/24
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2
637,000,304
RS_GCF_000009765.2
Monoisolate
Complete Genome
Full
representative genome
Minor
227,882
33,903
Streptomyces avermitilis MA-4680 = NBRC 14893
strain=MA-4680
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces avermitilis
true
Eubacteria
Actinobacteria
1
0.999
1
1
9,119,895
2
70.7
9,025,608
1
7,915
2,675,970
86.456522
99.89
0.79
0
356
yes
yes
yes
20
high
4,781,010
0
CTCGATGTCGTCGGTGCCGGCTCGGGCGACGTCGTCCTCCGCCGCCGCTCGGGCCACCGCCACGGCCACGGCGAAAGAGGTCTCGCGGAGGTCGCGGACGGGTGGCAGCACGGGCGCGCCCGGGTCCGTCACGTCCGTCTGGTTCGCGAC
95Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,008,100
1
TTAAAAGCGCTCCGTCGTAGGACCACGGGAAAACGAGCAATGTCCTTGCAAGAGAAGCCGGGATTTGATTTTTGGGTCACTGTTTTCCCAGGTGGTTGCAGGGCAGGGGGACGGTTGACTCATTTTCCCTGCTCCCCCCACCCCGCCCTC
120homo sapiens
G000008745
ASM874v1
GCF_000008745.1
PRJNA57811
SAMN02603115
null
1999/12/22
ChGP
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/745/GCF_000008745.1_ASM874v1
637,000,069
RS_GCF_000008745.1
Monoisolate
Complete Genome
Full
reference genome
Major
115,713
83,558
Chlamydophila pneumoniae CWL029
strain=CWL029
null
Bacteria
Chlamydiae
Chlamydiia
Chlamydiales
Chlamydiaceae
Chlamydia
Chlamydia pneumoniae
true
Eubacteria
Chlamydiae
1
1
0.9
1
1,230,230
1
40.58
1,230,230
1
1,063
373,983
89.578859
99.49
0
0
219
yes
yes
yes
20
high
805,090
0
ATGACGATGGCAAACACTCCTACCTTCGAGGGTCCTGTAAAAACTCTTGATCAGCTACGCCGAGCTCTTATCGAGCAACGAGGAGCTGAGGAAGGGCAAAAAATGTATGATAATTTCATTCAGTCTATTTTAATTTCAACATTTGGGCTT
24Chlamydophila pneumoniae CWL029
G000007185
ASM718v1
GCA_000007185.1
PRJNA294
SAMN02603235
null
2002/04/03
Fidelity Systems
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/185/GCA_000007185.1_ASM718v1
638,154,507
GB_GCA_000007185.1
Monoisolate
Complete Genome
Full
na
Major
190,192
2,320
Methanopyrus kandleri AV19
strain=AV19
null
Archaea
Euryarchaeota
Methanopyri
Methanopyrales
Methanopyraceae
Methanopyrus
Methanopyrus kandleri
true
Archaea
Euryarchaeota
1
1
0.9
1
1,694,969
1
61.16
1,694,969
1
1,814
523,004
90.896353
96.74
1.6
0
146
yes
yes
yes
15
medium
1,118,520
0
AAACGAGATGAATCGGTGGGGACCGCGCCGTCCGGAGGAATCACCCCAGGAGCCCGCGGATCCCGTCCGCAAGGTCCCGAGGCAGTTAAGACCCCGTTTCATCGACCGTCGGGATGCTTCCGATGAAGAGTCACTCCCCTGCCGAGTGGT
60Methanopyrus kandleri AV19
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,580,500
1
AGCAGCTGAGCACCTACTGGCTGACCACGTGCAAAAATAAGGTCCTCCTTTTCCCCTCAAGCAACCTGTACGCTGGGGAAGAGGCTTCATGAATCCCAGCCACTGTAACACAACCTGGGTTGAAACGGTAATTAAATCTTCAAGGTGTTA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,049,900
1
CCTGGTGCTCAGCGGAGAAGCTGTCTCTACAGCAGCCACAACCACAGGTTGGGCCTGCAGACCCCCAAGTGGAGGAGTTAAACGGTGCTGGGCCGGGGGTGCTCCAAGCACGTGAATTCCTTTAATAGGAACTGAAACATGGATAATCTG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,580,250
1
GTGCAGGTTTGTTACCTATGTATACGTGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTACATTAGGTATATCTCCTAATGCTATCCCTCCCCCCTTCCCCCACCCCATGACAGGCCCCGGTGTGTGATGTTCCCCACCCTGT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,750,200
1
TCTCCTTTCTCCCTTGAAGACTCATTCCAGAGAGGTCCTGCCCCATACCCAGAGGAAGGACTAGTACACAGAGAGGCCATGAAGAACGTGAACAGGCAAGTCTTGCCGGGGTTCGTCCCTCAGTCTGTTACCACAAGATTCTACCCTTTC
120homo sapiens
G000008165
ASM816v1
GCF_000008165.1
PRJNA58091
SAMN02598266
null
2004/06/24
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/165/GCF_000008165.1_ASM816v1
637,000,015
RS_GCF_000008165.1
Monoisolate
Complete Genome
Full
reference genome
Major
260,799
1,392
Bacillus anthracis str. Sterne
strain=Sterne
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus anthracis
true
Eubacteria
Firmicutes
1
1
1
1
5,228,663
1
35.38
5,228,663
1
5,471
1,495,624
84.251844
99.23
0.15
0
381
yes
yes
yes
20
high
1,009,450
0
TCTCAAGAGAGTTTTAACAAGATAGATTCGTTTGATCAACCAACAGATAATTTTTTAACTTATTATTATTACTTTTTTAAAGCAATACATGCTAGTGAGTTAGGAAATTTTCATCTCGCTAAAGAACATTACGAAAAGGCTGAAAGTTTT
6Bacillus anthracis str. Sterne ASM816v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,357,700
1
AAATAAAGAAAAGGTGTAAGGAACATTAAAGGCATATTACCATGTGGAAGAAACCAATGTGAAAAGGCTACATACCATATGAATCCAACTATCTGACATTCTGGAAAAGGCAAAACTATGTCTAGGAAAGGCATATTCTGGGAAAGGCAG
120homo sapiens
G000010425
ASM1042v1
GCF_000010425.1
PRJNA224116
SAMD00061080
null
2006/12/05
Gifu University, Life Science Research Center, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/425/GCF_000010425.1_ASM1042v1
639,633,010
RS_GCF_000010425.1
Monoisolate
Complete Genome
Full
representative genome
Major
367,928
1,680
Bifidobacterium adolescentis ATCC 15703
strain=ATCC 15703
null
Bacteria
Actinobacteria
Actinobacteria
Bifidobacteriales
Bifidobacteriaceae
Bifidobacterium
Bifidobacterium adolescentis
true
Eubacteria
Actinobacteria
1
1
1
1
2,089,645
1
59.18
2,089,645
1
1,683
614,966
86.722338
100
0
0
284
yes
yes
yes
20
high
1,623,960
0
AATTTACGGCTTATTTCGCGGCGTTCAGTCCCATCGCGTCATCCACGTCCTGCGCGATGTCGGCGACGACGGGGACGATCATCGGCTTGCGGTGCAGCTGTCGTGCCACCCAGCCGCCGAGCGTGCGTCGCATGATCTGCTGCAGCTTGT
12Bifidobacterium adolescentis ATCC 15703
G000007825
ASM782v1
GCF_000007825.1
PRJNA57975
SAMN02603340
null
2004/07/06
INRA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/825/GCF_000007825.1_ASM782v1
637,000,017
RS_GCF_000007825.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,900
1,396
Bacillus cereus ATCC 14579
strain=ATCC 14579
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus cereus
true
Eubacteria
Firmicutes
1
0.998
1
1
5,427,083
2
35.29
5,411,809
1
5,541
1,546,426
83.933929
98.18
0.58
18.18
383
yes
yes
yes
20
high
2,377,960
0
TATCCATACATTTGGCAACTATGATTTGGTCATAGAGTGAATGGATAAAAAGATACATTACTAGATACTTTATACGTGTACGCAATGGAACAATAAAATTCACATTTCCGAAAGGGGAATTATAATGATAAAACTTGTACTTATTCGTCA
7Bacillus cereus ATCC 14579
G000010985
ASM1098v1
GCF_000010985.1
PRJNA224116
SAMD00060965
null
2010/03/05
Japan Agency for Marine-Earth Science and Technology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/985/GCF_000010985.1_ASM1098v1
646,564,525
RS_GCF_000010985.1
Monoisolate
Complete Genome
Full
representative genome
Major
639,282
197,162
Deferribacter desulfuricans SSM1
strain=SSM1
null
Bacteria
Deferribacteres
Deferribacteres
Deferribacterales
Deferribacteraceae
Deferribacter
Deferribacter desulfuricans
true
Eubacteria
Bacteria
1
0.996
1
1
2,542,933
2
30.31
2,234,389
1
2,468
805,380
93.314963
96.55
1.72
0
345
yes
yes
yes
20
high
2,452,450
0
CAAAAGGAGTACGGCACATATAAGATTCGGAATTTAAATAACTGTTTCTGATATCTTGAGGTGATATATAACCAAATTCTATTAAAAAATCTTTAAAGTTAATTTCTGTTTTTAAATAATCTAGTAATTTTTTATTATATTTCATGTCTA
33Deferribacter desulfuricans SSM1
G000008765
ASM876v1
GCF_000008765.1
PRJNA57677
SAMN02603243
null
2002/11/22
Genome Therapeutics
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/765/GCF_000008765.1_ASM876v1
637,000,076
RS_GCF_000008765.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,562
1,488
Clostridium acetobutylicum ATCC 824
strain=ATCC 824
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Clostridiaceae
Clostridium
Clostridium acetobutylicum
true
Eubacteria
Firmicutes
1
0.998
0.1
0.9
4,132,880
2
30.93
3,940,880
1
3,896
1,211,240
86.343567
100
0
0
345
yes
yes
yes
19
high
2,280,720
0
ACCATCATACTCATTTAATATATTAGGTGGGCTTATATCATAGAACGGAATAACACCTTTATAAGTAAGCATATCCTTAGTATTTATTAGTATAGCTCTTTTATTCATTGATTTTATTAATGTATAGCATCTGTCCAACGCCGTTTTTGT
29Clostridium acetobutylicum ATCC 824
G000007865
ASM786v1
GCF_000007865.1
PRJNA224116
SAMN02604086
null
2004/01/30
Univ. Minnesota
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/865/GCF_000007865.1_ASM786v1
637,000,168
RS_GCF_000007865.1
Monoisolate
Complete Genome
Full
representative genome
Major
262,316
1,764
Mycobacterium avium subsp. paratuberculosis K-10
strain=K-10
null
Bacteria
Actinobacteria
Actinobacteria
Corynebacteriales
Mycobacteriaceae
Mycobacterium
Mycobacterium avium
true
Eubacteria
Actinobacteria
1
1
1
1
4,829,781
1
69.3
4,829,781
1
4,544
1,497,326
91.345322
99.28
0.33
0
336
yes
yes
yes
20
high
1,544,920
0
GTTCGGTGATCTCAACGACCCCGACAGCCGCATCGGCACCCAGCTGGCCTACTGGGAGGACGCGCTGGCCGGCATGCCCGAGCGGCTGGCGCTGCCCACCGACCGGCCCTACCCGGCGGCGGCCGACCAGCGCGGCGACAGCGTGGCGGT
65Mycobacterium avium subsp. paratuberculosis K-10
G000006785
ASM678v2
GCF_000006785.2
PRJNA57845
SAMN02604089
null
2014/04/01
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/785/GCF_000006785.2_ASM678v2
637,000,291
RS_GCF_000006785.2
Monoisolate
Complete Genome
Full
reference genome
Major
160,490
1,314
Streptococcus pyogenes M1 GAS
strain=SF370
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus pyogenes
true
Eubacteria
Firmicutes
1
1
0.6
1
1,852,433
1
38.51
1,852,433
1
1,776
539,188
85.75128
100
0
0
277
yes
yes
yes
20
high
792,740
0
AGAGTATAGATTGATACTGATTGACAAGTATTTGCTCACATATCCAAAGACTGATTGTGATATTTATACAAAACTTGGTTATGAAAAAAGCCAGTATTACAACATGCTAGATAATGCTTTGTTGTCGTTCTCAGAGCTATATAAAGAGGG
93Streptococcus pyogenes M1 GAS SF370
G000010605
ASM1060v1
GCF_000010605.1
PRJNA224116
SAMD00060929
null
2008/04/08
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
641,522,653
RS_GCF_000010605.1
Monoisolate
Complete Genome
Full
representative genome
Major
455,632
1,911
Streptomyces griseus subsp. griseus NBRC 13350
strain=NBRC 13350
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces griseus
true
Eubacteria
Actinobacteria
1
1
1
1
8,545,929
1
72.23
8,545,929
1
7,113
2,547,362
87.837226
99.84
0
0
357
yes
yes
yes
20
high
5,657,730
0
CGAGGCCGTCGCGTCGGGCGGTGCGCCGGACGAAGTCCCGGAAGCGCTCCTTCGCGCCCTCGCCGCTCAACCGGCCCAGCCGCCGGGCCTCGTGCAACTCCGTGACGAGGGTGCGCGCCGCGATCCGGGACAGCCGGCGCGTCAGCTGCC
96Streptomyces griseus subsp. griseus NBRC 13350
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,588,050
1
ACCTCCCCGCCAACACCACACGGGCCTGTTTCTGCAGGTCCTCAGTGACGCGTGTGATTGTGATGATCGCCATCCTGGCAGGTGTGCAGTGGTGGCTTTGACTCCCATGTCTCTGATGACTGACAGTGTTCAGCATCTTTCATGCACCTG
120homo sapiens
G000008465
ASM846v1
GCF_000008465.1
PRJNA224116
SAMN02604184
null
2004/12/02
University of Hawaii at Manoa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/465/GCF_000008465.1_ASM846v1
637,000,136
RS_GCF_000008465.1
Monoisolate
Complete Genome
Full
representative genome
Major
283,942
135,577
Idiomarina loihiensis L2TR
strain=L2TR
null
Bacteria
Proteobacteria
Gammaproteobacteria
Alteromonadales
Idiomarinaceae
Idiomarina
Idiomarina loihiensis
true
Eubacteria
Proteobacteria
1
1
1
1
2,839,318
1
47.04
2,839,318
1
2,658
892,961
92.667007
100
0.17
0
344
yes
yes
yes
20
high
1,596,530
0
CTCATCATCAGACCAGAACACTACTTTCCAGTCATTTAACTTGGAAATATAAAACTGGTTTCGGCGATATATATTTGCTTTAGTCAAAGCTAAAAATGTGGATATCAGCATGCTCGATACCATTAAGGAAGCAAGTGAAGTCAACGTATT
50Idiomarina loihiensis L2TR
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
569,550
1
CCACCCGGCTTTGTTCTTCGCGGCGCTGAGGCGGTTAGTTTAGCCTCCCACCCACCAGACAAAGGTGCGGGAAATGGGACCGGTTTGACTTGTTCAGGTGGGCACTCGGGGGTCCCGGCAAACCGTCTCCTCAAAAGCCCCCCGTGCACT
120homo sapiens
G000007625
ASM762v1
GCF_000007625.1
PRJNA224116
SAMN02603289
null
2003/02/05
Gottingen Genomics Laboratory
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/625/GCF_000007625.1_ASM762v1
637,000,080
RS_GCF_000007625.1
Monoisolate
Complete Genome
Full
representative genome
Major
212,717
1,513
Clostridium tetani E88
strain=Massachusetts substr. E88
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Clostridiaceae
Clostridium
Clostridium tetani
true
Eubacteria
Firmicutes
1
0.997
1
1
2,873,333
2
28.64
2,799,251
1
2,799
856,294
87.797934
98.28
0.14
0
315
yes
yes
yes
20
high
2,271,490
0
CTTTAAGTTGTTCTTCTAAGTAAGCTTTTATTTTTATCATAGCTTCATTTCTCCATGCTCCTCCATCTGCTTCAAATAGTGCCGCCCTTGGACCACTTTGCATTCTAAATATAAACTTTGATTCTGGTTGTTCTATTTCTGGAAAAGTTC
30Clostridium tetani E88 Massachusetts substr. E88
G000009545
ASM954v1
GCF_000009545.1
PRJNA224116
SAMEA3138207
null
2009/01/28
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/545/GCF_000009545.1_ASM954v1
643,348,578
RS_GCF_000009545.1
Monoisolate
Complete Genome
Full
representative genome
Major
218,495
1,349
Streptococcus uberis 0140J
strain=0140J
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus uberis
true
Eubacteria
Firmicutes
1
1
1
1
1,852,352
1
36.63
1,852,352
1
1,807
559,733
89.025412
100
0
0
291
yes
yes
yes
20
high
342,810
0
TGCGGCATTTGGGAATTTCGGCTGCGGTTAGAGCCAGTTTCTACATCTACAATACCAAGGAAGATTGTGATCGTTTAGTTGAGGCGATCCTTAAAACAAAGGAGTTTTTTAGTGGCACTCTCTAAATTAACGAGTTTATATATGGCAGTG
94Streptococcus uberis 0140J
G000007785
ASM778v1
GCF_000007785.1
PRJNA57669
SAMN02603978
null
2003/03/28
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/785/GCF_000007785.1_ASM778v1
637,000,101
RS_GCF_000007785.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,185
1,351
Enterococcus faecalis V583
strain=V583
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Enterococcaceae
Enterococcus
Enterococcus faecalis
true
Eubacteria
Firmicutes
0.99
0.991
1
1
3,359,974
4
37.38
3,218,031
1
3,271
1,000,353
87.714339
99.53
0.31
0
309
yes
yes
yes
20
high
27,300
0
GCTAGCCACAATAAGCTTCCCACGATACCGACAACGGCACTAAAGAGTGAACCGACAACTAAAAATAAAAGGACCACTAAAAGAATATTTATAAACATTGGTCGTTGATTATTCATACGTACTACCTCCAAATTTTTCCTGTTTTCTATA
37Enterococcus faecalis V583 ASM778v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
877,200
1
TCTATAGTGACGGTAATAAACCAAGTCAATTTTCTATAGTGACGGTGATAAACCAAGTCAATTTTCTATAGTGACGGTGATAAACCAAGTCAATTTTCTATAGTGACGGTGATAAACCAAGTCAATTTTCTTTTCTTTTCTTTTCTTTTT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
929,100
1
CAGAGGGGACGGGCACCACGTGGTCATCCCCATGACAGGTTCTGTCATGGTGACAGTGTTGTGGGAGGATGGTGTGCTGCTGCCCCTGCACCCCGTGAGATGAATCCTGCCTCTGGGAGGTACAGCTGGGACGGGGCGAGGGACCCACTC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,444,250
1
GTCTGGCTCTGATGCCCAGGCTAGAGTACAGTGACGTGATCATAGTTCACTGCAGCCTCGAATTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGAGACTACAGGCACATGCTACCACACCCAGCTACTGCATGCAT
120homo sapiens
G000010645
ASM1064v1
GCF_000010645.1
PRJNA224116
SAMD00060940
null
2008/11/12
RIKEN Genomic Sciences Center (GSC)
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/645/GCF_000010645.1_ASM1064v1
643,348,524
RS_GCF_000010645.1
Monoisolate
Complete Genome
Full
representative genome
Major
511,995
511,435
Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2
null
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
null
Candidatus Azobacteroides
Candidatus Azobacteroides pseudotrichonymphae
true
Eubacteria
Bacteroidetes
1
0.968
1
1
1,224,919
5
32.95
1,114,206
1
1,089
310,957
74.780128
89.51
1.09
0
252
yes
yes
yes
20
medium
177,710
0
TCTGCCTTTGCTCTTGCGTACAAAGAATTAGACCCAAATGCGAAGCTGTCTGTAATTTTTAGCACATATGAATTAAAGGGAAAAATTTGTTTACAGAGTACGAATGAGGAAGTCATAGCCGTTTTAAGAAATGAATTGAGGATCGCCTAT
19Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,005,350
1
ATACCACATCGGAAGTGATTTTCTAAATTGGATTTGAATTCGGCTCCTGTTTTCTATTTGTCATGAAACAGTGTATTTGGGGAGATGCTGTGGGAGGATGTAAATATCTTGTTTCTCCTCAAACTGTCACCTCCCGGTGTTTCTTGCTGA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,727,900
1
TTTGAGCCTATGAGGGATCCTGGGAGGGTAGTGGAGTGAGGACAGCAGAGGAGCACCAAAGACAAACTCAGCCCATTTCACAATTTTATCGTGAGCCAGCCCTATCTTAGCCCTCTCGTTTTGAAGAAAAGCCAAATTTGTATTTAAAAA
120homo sapiens
G000005825
ASM582v2
GCF_000005825.2
PRJNA224116
SAMN02603086
null
2010/12/15
Center for Genomic Sciences, Allegheny-Singer Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/825/GCF_000005825.2_ASM582v2
646,311,908
RS_GCF_000005825.2
Monoisolate
Complete Genome
Full
representative genome
Major
398,511
79,885
Bacillus pseudofirmus OF4
strain=OF4
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus pseudofirmus
true
Eubacteria
Firmicutes
1
0.995
1
1
4,249,248
3
39.86
3,858,997
1
4,260
1,228,222
85.144124
98.68
1.32
0
377
yes
yes
yes
20
high
1,613,430
0
ATTGGCAGAAGAGCTGAGCGAGTACTTCTCCTCATTAATCGCCCAAAAAAGAGCGGAGCCGGGCGACGATCTTATTAGTATGCTGATTAAAGAAAATGATTGTACGGAAAATGAATTAATCTCTACATTTATATTGCTTGTCATTGCTGG
9Bacillus pseudofirmus OF4
G000007265
ASM726v1
GCF_000007265.1
PRJNA57943
SAMN02604013
null
2002/08/28
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/265/GCF_000007265.1_ASM726v1
637,000,285
RS_GCF_000007265.1
Monoisolate
Complete Genome
Full
reference genome
Major
208,435
1,311
Streptococcus agalactiae 2603V/R
strain=2603V/R
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus agalactiae
true
Eubacteria
Firmicutes
1
1
1
1
2,160,267
1
35.65
2,160,267
1
2,106
643,747
87.791509
100
0.18
0
298
yes
yes
yes
20
high
1,680,640
0
TATGTTGCCAATCTCCACCATTACCCATAAATGGATCAAATGTATAACCTAACTCTTTAGCGCGGTTAAAGACATACCATGTACATTCACCCCATGGATAAGTTGATGCAATATAGCTAGCTGTGTTAACTGCTGTTGATAAGCTAAAAC
91Streptococcus agalactiae 2603V/R
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,519,700
1
TCAGACTCTAAGCCAGTCATCTTTCCATCATTCTATGACTCTTCCCTTTGCGATGAAGGAGGGGGACCCAGGCAATACTCCCATATGACTAATGGATCCAGAAAAATCATTACTTTCAGAACCTACAAAAAAACTTTGAGGACAAAAAGC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,373,450
1
CCAGCATCCCGCCAGGGAAGCCTCCCCTCACCATCCAGGGTTCTCCAGCCTGCACGAAGGCCAGCAGCATCCAGGGAGCAGGAAGGCAGAGGACACCTCCAGGAGCAGCCAGTTATGGAGCGAGCTGGAGGATAAGACCCAGCCTCCCCG
120homo sapiens
G000007825
ASM782v1
GCF_000007825.1
PRJNA57975
SAMN02603340
null
2004/07/06
INRA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/825/GCF_000007825.1_ASM782v1
637,000,017
RS_GCF_000007825.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,900
1,396
Bacillus cereus ATCC 14579
strain=ATCC 14579
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus cereus
true
Eubacteria
Firmicutes
1
0.998
1
1
5,427,083
2
35.29
5,411,809
1
5,541
1,546,426
83.933929
98.18
0.58
18.18
383
yes
yes
yes
20
high
4,002,960
0
CCCATCTCTTTTGCAAGTTGATTAGCATACTCTTTTGGCGAATCACCAAATATATCACTTACCGTTTTTCCTTCTTTCTCACCTTCAATTAAATGAAGTTCTGCATCTTCTAAAAAAGCGTCAACATCTTCTTCTTTAATTCCTTTCGTT
7Bacillus cereus ATCC 14579
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,332,700
1
CATTTCTGTTGGAAAGATACCTAGGAGTGGAATTGTGGTGTCGTAGTTAACTCTGTTTAACTTTTTGAGGAACTGTTTTCCAAACTTTTCCAAAGTGGTTAGATCATATTACATTCCCACCAGCAAGTATGAGAGTTGTAATTTCTCCAC
120homo sapiens
G000010325
ASM1032v1
GCF_000010325.1
PRJNA224116
SAMD00060914
null
2007/07/11
Japan Agency for Marine-Earth Science and Technology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/325/GCF_000010325.1_ASM1032v1
640,753,037
RS_GCF_000010325.1
Monoisolate
Complete Genome
Full
representative genome
Major
387,092
387,092
Nitratiruptor sp. SB155-2
strain=SB155-2
null
Bacteria
Proteobacteria
Epsilonproteobacteria
null
null
Nitratiruptor
Nitratiruptor sp. SB155-2
true
Eubacteria
Proteobacteria
1
1
1
1
1,877,931
1
39.69
1,877,931
1
1,933
610,396
95.761026
98.78
0
0
319
yes
yes
yes
20
high
235,040
0
TACCAAAATATGTAACGAGAGTAAAATTGATTGGGAGCAGTGTACAAGAGATCGTCTCTAAAATTAAAGACGATAACATCTCTTATAGTGGACAAAAATAATGAGTCGCTCACTCATAAACAAAATTCTTATTACGCTAGGATTTCTCTT
68Nitratiruptor sp. SB155-2 ASM1032v1
G000009065
ASM906v1
GCF_000009065.1
PRJNA57621
SAMEA1705942
null
2003/05/06
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/065/GCF_000009065.1_ASM906v1
637,000,351
RS_GCF_000009065.1
Monoisolate
Complete Genome
Full
reference genome
Major
214,092
632
Yersinia pestis CO92
strain=CO92
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia pestis
true
Eubacteria
Proteobacteria
1
0.994
1
1
4,829,855
4
47.64
4,653,728
1
4,298
1,371,586
83.669593
99.82
0
0
372
yes
yes
yes
20
high
170,560
0
ACTTTAGCTCAATTGGCTGCCAATGGTTTGCCAATAGGCCTCATTACCAATAAGCCAACACCGTTTGTTGCCCCTTTACTAACGTCATTGGGGATCTCAGACTATTTCTCAGTCATCATTGGGGGCGATGATGTGGTGGTGAAGAAACCG
116Yersinia pestis CO92 ASM906v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
788,250
1
GCCGAGGCAAGAAAATGACTTGAACCCGGGAGGTGGAGGTTGCAGTGAGCCGAGATCACGCCACTGCACTGCAGCCTCCTTGGCGAGAGAGAAACTGCCTCCAAAAAAATTCCCTGAGGGAAACCTGTATGCAGAACGCCCTGATCCCAA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
951,750
1
GGAGCGGCTGTCAGGCAGTGCCAGCCCTGAGCAAGTGCCAGCTGGTGAGTGCTGTGCTCTGCAGGAGTATGAGGCCGCCGTGGAGCAGCTCAAGAGCGAGCAGATCCGGGCGCAGGCTGAGGAGAGGAGGAAGACCCTGAGCGAGGAGAC
120homo sapiens
G000008625
ASM862v1
GCF_000008625.1
PRJNA57765
SAMN02603207
null
1999/12/22
DIVERSA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/625/GCF_000008625.1_ASM862v1
637,000,010
RS_GCF_000008625.1
Monoisolate
Complete Genome
Full
reference genome
Major
224,324
63,363
Aquifex aeolicus VF5
strain=VF5
null
Bacteria
Aquificae
Aquificae
Aquificales
Aquificaceae
Aquifex
Aquifex aeolicus
true
Eubacteria
Bacteria
1
0.994
0.9
1
1,590,791
2
43.3
1,551,335
1
1,776
514,666
95.304851
98.98
1.22
75
317
yes
yes
yes
20
high
680,550
0
CTTAACTTAATTCCCTTTTTACTGGAAAACAGTGTGTTCCCAGAAGAAATATTCGTGCAGGGAGGTTTTGCGGGGAAAAACATAACCGGTAAAACCCACGAAAAGTTCGGTGACAGATACTTTAAGGCGACTTTTAACTTCAACAAAGAC
2Aquifex aeolicus VF5
G000007465
ASM746v2
GCF_000007465.2
PRJNA57947
SAMN02604090
null
2011/09/01
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/465/GCF_000007465.2_ASM746v2
637,000,288
RS_GCF_000007465.2
Monoisolate
Complete Genome
Full
reference genome
Major
210,007
1,309
Streptococcus mutans UA159
strain=UA159
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus mutans
true
Eubacteria
Firmicutes
1
1
0.9
1
2,032,925
1
36.83
2,032,925
1
1,897
591,301
85.692487
100
0
0
308
yes
yes
yes
20
high
18,590
0
CGAATACTTCTGTAGAAGATTATCTATTTTTCTAAGAAGTCAGTCTGGAGTTCAACTTCATATCTTGTTTAAGACAAGGAAGTCTATAAAATCCACTTAGGATATGTTAAGTATCCTAGAGATGGTTCATTGACAATTGAATAGCTAGTA
92Streptococcus mutans UA159
G000007105
ASM710v1
GCF_000007105.1
PRJNA224116
SAMN02603579
null
2010/01/12
Macrogen Inc.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/105/GCF_000007105.1_ASM710v1
637,000,356
RS_GCF_000007105.1
Monoisolate
Complete Genome
Full
na
Major
264,203
542
Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
strain=ZM4
null
Bacteria
Proteobacteria
Alphaproteobacteria
Sphingomonadales
Sphingomonadaceae
Zymomonas
Zymomonas mobilis
true
Eubacteria
Proteobacteria
1
1
0.9
1
2,056,363
1
46.33
2,056,363
1
1,753
604,103
86.562441
100
0
0
320
yes
yes
yes
20
high
762,840
0
TTTCAATCTGGGCCCGATGACCTTTATTTTGGGTGGTTTTATTGATGCCTCTGGTCTGGTTTCAAACCGTCATATAGCCTCCGGCACCTTTAATTCATGGAAGTCGATGCCCTTTAAAAATAATCCTGACTATCATACCGCGAATACGGA
117Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 ZM4
G000010185
ASM1018v1
GCF_000010185.1
PRJNA224116
SAMD00060918
null
2008/02/14
Kitasato Institute for Life Sciences
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/185/GCF_000010185.1_ASM1018v1
641,522,627
RS_GCF_000010185.1
Monoisolate
Complete Genome
Full
representative genome
Major
334,413
1,260
Finegoldia magna ATCC 29328
strain=ATCC 29328
null
Bacteria
Firmicutes
Tissierellia
Tissierellales
Peptoniphilaceae
Finegoldia
Finegoldia magna
true
Eubacteria
Firmicutes
1
0.995
1
1
1,986,740
2
32.07
1,797,577
1
1,846
611,719
90.720879
99.39
0
0
282
yes
yes
yes
20
high
1,606,540
0
TTGATTATAAAAAAATACTTGATCTCCCAAAAATTCCAAATTATCTGGTAATTTTATAGTCTTTAAACTTAGATCTGCAAATGCATAATCACTAATTTTAATTATGCTGTTTGGTAAATTAACGCTTTTAATATTTTTATTTTCTCGAAA
39Finegoldia magna ATCC 29328
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,879,600
1
ACACAATCACCAGTGTTGAGTATATGGAAGTCTCCTCCACAAGTACAATATAATATTTTCAAATACTTGTTGGGTATTATTGACTATTATCTTGCCAGCATGGAGACAGTCAGGATTTCTAGGTATGACATTTGAACAATCTCAAGAATA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,089,300
1
GGATTCAATACCAACATGCTGCGGCGTCCCCCAGGCATGGCAGGAAGAGGGGGGTCAAGGCCGCCAGGGTTGAAGGCGGGGAGCATGGAGCCCCTCTGGATGGGACCCAGGAGCCAACACGCCGTGCCCCTCCAGCCATCCAGGACAGGG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,139,400
1
TCCCAGGCCTAGTTCCTGGGGAATGCTCAGGGCCAGGGAACCCTCCTCTGGAGCAGGCACATGTCCTTAGCACTCACCTTCCCTACTAAGAGCCAGGGCCTGAAAGGAGACAAAAAAGGCCTGAGAAAGAAGCTGGGGCCCAGGACTGCA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,287,600
1
TAACAGCACTGCCTGATTTATCTTTCTGAAGGACAGCTCTGACATGCGACTCCTCCGCTCAGAAGTCTTCAAATACTCCTCCTACGGAAAAAATCAAACTTTTTAGCCTGGCCTAATTTAAAGCTCTTACTGACTGTATTCCCAGGTACT
120homo sapiens
G000009545
ASM954v1
GCF_000009545.1
PRJNA224116
SAMEA3138207
null
2009/01/28
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/545/GCF_000009545.1_ASM954v1
643,348,578
RS_GCF_000009545.1
Monoisolate
Complete Genome
Full
representative genome
Major
218,495
1,349
Streptococcus uberis 0140J
strain=0140J
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus uberis
true
Eubacteria
Firmicutes
1
1
1
1
1,852,352
1
36.63
1,852,352
1
1,807
559,733
89.025412
100
0
0
291
yes
yes
yes
20
high
950,820
0
TCCTTCTATTATCTTGTGGTATTTAAATACTATCACTTTTTCATTCTAATAGCAAGATAAAAAGAAGTAAAAGTTGAAACTTTTACTTCTTTTTCTTTAATCAACCGATTTTAATGCCTCTAACATATTTAATTTCTTCAATTTAGTATG
94Streptococcus uberis 0140J
G000009345
ASM934v1
GCF_000009345.1
PRJNA57741
SAMEA1705958
null
2007/01/12
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/345/GCF_000009345.1_ASM934v1
640,069,335
RS_GCF_000009345.1
Monoisolate
Complete Genome
Full
reference genome
Major
393,305
630
Yersinia enterocolitica subsp. enterocolitica 8081
strain=8081
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia enterocolitica
true
Eubacteria
Proteobacteria
1
0.998
0.9
1
4,683,620
2
47.22
4,615,899
1
4,253
1,352,606
85.086813
99.95
0
0
373
yes
yes
yes
20
high
965,640
0
ACCTATGTTGCTGGGCTGAAGCGCGCAATTCAAACGCCATCAGAAGAATATGCGGCATTGGGACTAAAAGACGGTGATCGTCATCTGCAACTGAACACCAATGTGTTACAGATTGAAAATGAACTCTATGCTCCGATTCGACCTAAGCGG
115Yersinia enterocolitica subsp. enterocolitica 8081
G000007785
ASM778v1
GCF_000007785.1
PRJNA57669
SAMN02603978
null
2003/03/28
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/785/GCF_000007785.1_ASM778v1
637,000,101
RS_GCF_000007785.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,185
1,351
Enterococcus faecalis V583
strain=V583
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Enterococcaceae
Enterococcus
Enterococcus faecalis
true
Eubacteria
Firmicutes
0.99
0.991
1
1
3,359,974
4
37.38
3,218,031
1
3,271
1,000,353
87.714339
99.53
0.31
0
309
yes
yes
yes
20
high
1,850,290
0
TGATTGGAATAAAGTAGCTAGAACAGGTAAAAAGACAGTTGTCATTGCATAAGCCATGATTGCGCTAATACCAATTCCTAACGCTAAAAATCCGTAAATTTTGGCATAAAATTTATTCAAACCTGTGCCAGTTTGGATATACTCTTGATT
37Enterococcus faecalis V583 ASM778v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,672,600
1
TACAGGTAGCAGCCTCCATTCTCATCAGATATTATGTATTTGGAAAATGAATCTTATCCTCAAGTATTAGTCACTGCAAGAAGCAAAAACCTTCCTTGAGACACTTTGGAATGTTCCAGAGTCAATGTTGTTTGGAGTAAGATGTATGAA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,536,300
1
TTGCCTTTATTTTGCATTATTAGGGAGGATTTTCTGAACAAACACCTCCCAAGTATTTATTAATGAAACACCATGAGTTTCACAAAATTTCGCTTTCCCTGGTCCTAATCTAGCCCCTGCTTTATTCCCCCACTTCTTAACATGCTAAAG
120homo sapiens
G000008545
ASM854v1
GCF_000008545.1
PRJNA57723
SAMN02603986
null
2001/01/09
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/545/GCF_000008545.1_ASM854v1
637,000,321
RS_GCF_000008545.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,274
2,336
Thermotoga maritima MSB8
strain=MSB8
null
Bacteria
Thermotogae
Thermotogae
Thermotogales
Thermotogaceae
Thermotoga
Thermotoga maritima
true
Eubacteria
Bacteria
1
1
0.9
1
1,860,725
1
46.25
1,860,725
1
1,866
602,696
95.430706
100
1.79
100
312
yes
yes
yes
20
high
1,299,480
0
ACGTGGAAAGAGAGACGAGAGGCTGGGACATGGCCACGAAGATCACCGTTTCCATGAGAGGAAAAGAAGAAGAGAGCGACTACAGGTACTTCCCGGAGCCGGACATACCGCCCGTTGTTCTCTCCGACGAGTATCTCGAAGAGGTGAAAA
103Thermotoga maritima MSB8 ASM854v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,789,650
1
AATGCAAGTGAGGAATAATACACATAGAATTGCTTATGGGCCCTGGAATGGGGGCGGAGCAGGGGAGGAGGGAGAGTTTCCCAAACTTTTAGAGAATGCAGCCTTGAAGAGAGAAGATGGTGGCCTTTGACCACACCAAAGAGGCAACCA
120homo sapiens
G000006985
ASM698v1
GCF_000006985.1
PRJNA57897
SAMN02604006
null
2002/07/02
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/985/GCF_000006985.1_ASM698v1
637,000,073
RS_GCF_000006985.1
Monoisolate
Complete Genome
Full
reference genome
Major
194,439
1,097
Chlorobium tepidum TLS
strain=TLS
null
Bacteria
Chlorobi
Chlorobia
Chlorobiales
Chlorobiaceae
Chlorobaculum
Chlorobaculum tepidum
true
Eubacteria
FCB
1
1
0.8
1
2,154,946
1
56.53
2,154,946
1
2,009
639,065
87.375415
98.9
0.55
0
334
yes
yes
yes
20
high
1,508,260
0
TGTAACGATCAAGATTGAAAATGGCCAGTCCTCAGAATATCCCGAACAGTATCGATGCAAACCAGTCGAAAGGGGCTCCTGCGAAAACGAAGTAGAGAGCATAGCCGCCGGAAAGGGCGGCAAACAGGGCAGTAAAAAAGATCGTCGCAC
26Chlorobium tepidum TLS
G000008185
ASM818v1
GCF_000008185.1
PRJNA57583
SAMN02603967
null
2004/02/03
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/185/GCF_000008185.1_ASM818v1
637,000,327
RS_GCF_000008185.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,275
158
Treponema denticola ATCC 35405
strain=ATCC 35405
null
Bacteria
Spirochaetes
Spirochaetia
Spirochaetales
Spirochaetaceae
Treponema
Treponema denticola
true
Eubacteria
Spirochaetes
1
1
1
1
2,843,201
1
37.87
2,843,201
1
2,578
885,778
91.799314
100
0
0
281
yes
yes
yes
20
high
1,146,470
0
AATGTGTAAAGATATAAATCCTTACAAGGTGCTCTATGCTTCGATAGCTCCTGTTTGTGCAGCTTTTTTTTCGGGCGATACCAATTTAACCTTGCCTATCTTATTGCGCCATTCAAACGAGAGCTTGGGTGTCAGAAGGAGAATTTCTTC
104Treponema denticola ATCC 35405
G000008685
ASM868v2
GCF_000008685.2
PRJNA57581
SAMN02603966
null
2011/11/09
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/685/GCF_000008685.2_ASM868v2
637,000,036
RS_GCF_000008685.2
Monoisolate
Complete Genome
Full
reference genome
Major
224,326
139
Borrelia burgdorferi B31
strain=B31
null
Bacteria
Spirochaetes
Spirochaetia
Spirochaetales
Borreliaceae
Borreliella
Borreliella burgdorferi
true
Eubacteria
Spirochaetes
1
0.879
1
0.9
1,521,208
22
28.18
910,724
1
1,511
441,681
85.52361
100
0
0
178
yes
yes
yes
20
high
353,080
0
AGTATCCCAAATTGTAAAATTTGAATCGTAATTTTCGTTAAAATCCTTATAGTAAACTCTCAAAAGCCAAGACCCAAAAGAATGAAAAGTTTGAATATGAAGTTTTTTGTCAAATTTTAAAAGATCATTTATCCTATCATTCATTTCATT
14Borrelia burgdorferi B31
G000009205
ASM920v1
GCF_000009205.1
PRJNA57679
SAMEA1705932
null
2006/09/20
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/205/GCF_000009205.1_ASM920v1
640,069,308
RS_GCF_000009205.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,563
1,496
Clostridioides difficile 630
strain=630
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Peptostreptococcaceae
Clostridioides
Clostridioides difficile
true
Eubacteria
Firmicutes
1
0.998
0.9
1
4,298,133
2
29.06
4,290,252
1
3,829
1,209,268
82.891874
99.51
0.37
0
340
yes
yes
yes
20
high
2,799,810
0
TTCACGACTTCCATAAAATCTTTTCTTCTTTGTAAAGACCATGTTTTTCCTGTAGGGTTTTGAAATGTTGGTATTACATATATCACCTTTATGTTAGAATTTTCAGATAATAATTTGTCTAAATCATCTGTTACCATTCCTTCTTCATCT
28Clostridioides difficile 630 ASM920v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
266,550
1
TTTTTTTAAAACTAGAAATTATCCTAAAGGCATACAGCAGGTGGATAAATATTTACTCAAATAAATAATCAAATCTCAGTAAGAACGGTAAGGATCAGTGGTATCAGAGCCACAATCCACCGCTCCCCACCCTCAAAGCGCATTGTGATG
120homo sapiens
G000007985
ASM798v2
GCF_000007985.2
PRJNA57743
SAMN02603989
null
2012/07/31
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/985/GCF_000007985.2_ASM798v2
637,000,120
RS_GCF_000007985.2
Monoisolate
Complete Genome
Full
reference genome
Major
243,231
35,554
Geobacter sulfurreducens PCA
strain=PCA
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfuromonadales
Geobacteraceae
Geobacter
Geobacter sulfurreducens
true
Eubacteria
Proteobacteria
1
1
1
1
3,814,128
1
60.94
3,814,128
1
3,417
1,176,369
90.878544
99.35
0
0
363
yes
yes
yes
20
high
1,324,050
0
TTGTCCTTCTGCTTGATGGGAAACACCTGCTTCTGCACCGCGATGTCCTGGGGCACAAGAGCGAGCAGCTCGGGGGGGAACGCATAGTCCGCGAATCCTCTCACCGTCTTGAAGGCAAACTGTTTTGAAAGAGCATCGATCAATTCGTCG
43Geobacter sulfurreducens PCA
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,022,900
1
GTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCAGGTGTGGTGGTGCGCGCTTGTAGTCCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAGTGAGCTGATACTGTGCCACTGCACTCCAGC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,794,500
1
GGAGCGACGGGGTGGGAGGGATCTGCCTGCCAGCCCACAGGGCTCAGGGGTCCTCAGAGGTGTCGCCCCTTCCATGCTCAAAATGGCTGGAAGAGGAGAGCCTCTCAGTATCCCCACCTTATAGATGAGGAGGCACAGAGAGGGGGAAAT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
184,500
1
TGACTCATTATACTGCCTCCTCCAACTCCTGGCCTCAAGCAATCCTCCCACCTCAGCCTCCCAAAGTGCTGGAATTACAGGCTGACAGCCACCATGCCTGAAAGCTTTGCAATTTACATCGAGGGTAATAAGAATGCTCATGCCCTGTGA
120homo sapiens
G000006175
ASM617v2
GCF_000006175.1
PRJNA224116
SAMN00000040
null
2010/06/03
US DOE Joint Genome Institute (JGI-PGF)
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/175/GCF_000006175.1_ASM617v2
646,564,549
RS_GCF_000006175.1
Multispecies
Complete Genome
Full
representative genome
Major
456,320
2,188
Methanococcus voltae A3
strain=A3
null
Archaea
Euryarchaeota
Methanococci
Methanococcales
Methanococcaceae
Methanococcus
Methanococcus voltae
true
Archaea
Euryarchaeota
0.97
1
1
1
1,936,387
1
28.59
1,936,387
1
1,727
526,927
80.167033
99.05
0
0
165
no
yes
yes
19
medium
1,090,180
0
TCCTCAAAAACTACTAAAGATTTAGCAGAAATTAGGAAATCATTAAATTCATTAAGAAATTCTAAAAAATAATAGTAATAATAATAGTAATAATAGTAATAATAGGGTATAATATAATAAAAAAATATAGTATATTAAATACTTAAATTA
59Methanococcus voltae A3
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,130,000
1
ATTTCAAGTGCTCAGCAGCCAGATGTGCCCAGTGTCTCCCATACTGGAAAGCACAGATCGAACATGCCTGTCGTTACAGATGGGTATGTTCTGTGGAAGAGCATTTTTGTAGAAGTTTTACAATTTTAGGCTTTACATTTAGAAATCATA
120homo sapiens
G000008345
ASM834v1
GCF_000008345.1
PRJNA224116
SAMN02603281
null
2004/07/30
Goettingen Genomics Laboratory
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/345/GCF_000008345.1_ASM834v1
637,000,215
RS_GCF_000008345.1
Monoisolate
Complete Genome
Full
representative genome
Major
267,747
1,747
Propionibacterium acnes KPA171202
strain=KPA171202
null
Bacteria
Actinobacteria
Actinobacteria
Propionibacteriales
Propionibacteriaceae
Cutibacterium
Cutibacterium acnes
true
Eubacteria
Actinobacteria
1
1
1
1
2,560,265
1
60.01
2,560,265
1
2,373
780,330
89.799572
100
0
0
319
yes
yes
yes
20
high
696,930
0
AGCGCCGACAAGACGGTGAGGAGAAACGGAACTAAGAAAGCTGTGTGAAGGTCTTGTACACATGTATTACTTTGCGCTATTGTTGAAAACGTCGTGATGGTTCCTCAACGGTGAGGCAGGGGAGATCGATGAACACGCAGCAGTCCGCAG
77Propionibacterium acnes KPA171202
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,029,650
1
TTAAACCTGCCGTCTCCAACCTCAGCAAAAGCTGCCCCCTCCTTCTGAAAGCTCAGAGCTGGGGTGGGACGTATGCCAGGCCGAGAGGGTCTGCACACCCGCCCCCAGGAGTGTGCATCTCTCGGTGGCTAATTCACTCGCATTGATGGA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,607,600
1
GGTGCAAATGGTGGAGTCTCTTCTGCCTCACTCAGTACATGCTTCTGTACTGTGAGTTAGTTAGTTCATTTGCAGATGGTAAACAAGAGAATGCTGGCCGGGCGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAG
120homo sapiens
G000011065
ASM1106v1
GCF_000011065.1
PRJNA62913
SAMN02604314
null
2003/03/28
Washington University Department of Molecular Biology and Pharmacology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/065/GCF_000011065.1_ASM1106v1
637,000,026
RS_GCF_000011065.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,186
818
Bacteroides thetaiotaomicron VPI-5482
strain=VPI-5482
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Bacteroidaceae
Bacteroides
Bacteroides thetaiotaomicron
true
Eubacteria
Bacteroidetes
1
0.998
0.7
1
6,293,399
2
42.86
6,260,361
1
4,944
1,919,297
89.876027
99.41
0.4
0
348
yes
yes
yes
20
high
5,869,500
0
TGCTTTTCCTGTTTGCACAGTTACATGCCTTGTTCTACAACGGGGATATTCTTTTGCTTTATGCAGTAGTCGGCTTTGCCTTGATTCCTGTTTGCAAGCTCAAAGATAAGACAGTCTTTTGGATTGCTGCCATCTTACTTTTGCAACCTT
11Bacteroides thetaiotaomicron VPI-5482
G000010305
ASM1030v1
GCF_000010305.1
PRJNA224116
SAMD00060909
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/305/GCF_000010305.1_ASM1030v1
643,692,024
RS_GCF_000010305.1
Monoisolate
Complete Genome
Full
representative genome
Major
379,066
173,480
Gemmatimonas aurantiaca T-27
strain=T-27
null
Bacteria
Gemmatimonadetes
Gemmatimonadetes
Gemmatimonadales
Gemmatimonadaceae
Gemmatimonas
Gemmatimonas aurantiaca
true
Eubacteria
FCB
1
1
1
1
4,636,964
1
64.27
4,636,964
1
4,004
1,466,180
93.177023
98.9
4.4
0
353
yes
yes
yes
20
high
310,830
0
CCGTGCAGGTCATTGAACGACCAGCCCGTGGCGATGGCCGGCACGTTCGCGTTCACCCAGGTGCCACCCACCATGCGCATGAGTCCCTGTCGTCCCGCGGAAGACGACGCAGCGCCGGCACCCCACAGACCGTCGCTCGATGCACCCCAG
42Gemmatimonas aurantiaca T-27
G000009865
ASM986v1
GCF_000009865.1
PRJNA224116
SAMD00061066
null
2005/06/30
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/865/GCF_000009865.1_ASM986v1
642,555,160
RS_GCF_000009865.1
Monoisolate
Complete Genome
Full
representative genome
Major
279,808
1,283
Staphylococcus haemolyticus JCSC1435
null
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Staphylococcus
Staphylococcus haemolyticus
true
Eubacteria
Firmicutes
1
0.989
1
1
2,697,861
4
32.78
2,685,015
1
2,600
785,925
85.820989
99.62
0
0
341
yes
yes
yes
20
high
646,100
0
ATTTGATATTAGTGATGAATAATATATATGTGAGATTGGGAAGTGTTTTAAATTATCTCAATCTCACTAGCAGTTACTACTAATCATTGGTGTTTACTTTAAGATATATACATGTACGACCAGGGGCATTAAAGCTACGCTCTAATTTGG
89Staphylococcus haemolyticus JCSC1435
G000009065
ASM906v1
GCF_000009065.1
PRJNA57621
SAMEA1705942
null
2003/05/06
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/065/GCF_000009065.1_ASM906v1
637,000,351
RS_GCF_000009065.1
Monoisolate
Complete Genome
Full
reference genome
Major
214,092
632
Yersinia pestis CO92
strain=CO92
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia pestis
true
Eubacteria
Proteobacteria
1
0.994
1
1
4,829,855
4
47.64
4,653,728
1
4,298
1,371,586
83.669593
99.82
0
0
372
yes
yes
yes
20
high
3,643,770
0
ATTATCAATTACGGGAAGCGCAGCGCCCTGAACAACATTGTACTGTCGAAGTCGCCACCGCGCTGCTCCACCAAGCGGGTGATATACAAGCCGCAGAAGGGCTACGCGATCACTTTCACTACTTTCGTCAGCAATATTTAGCCGGAAAAC
116Yersinia pestis CO92 ASM906v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,723,600
1
TCCTCCAAAGATATGGCAAAGTTTTCTAGTTACTGTTTTTTAATACTTCCTGGTATTCTTAGAGTCCACAGCTTTGAGTGCAGCTGGAAAACATCTACACAGAGGATATGTTTGGACAGGTATTGAATATAATAAACTATATTTAAATAT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,814,400
1
AAAATCATGTGAAATAGCAGGGTGATTATTTTCATGGAAAATTTAAATGGTATTTCATTTGACTCTGAATTACTTCTATTAGAAGAAAAATTAACCAAAGGCACGTTTTGCTTCTGTTCACTCTCTGGCAGGAGCCAAGTGGGCTCCTGC
120homo sapiens
G000008645
ASM864v1
GCF_000008645.1
PRJNA224116
SAMN02603244
null
1999/12/22
Genome Therapeutics Corporation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/645/GCF_000008645.1_ASM864v1
638,154,510
RS_GCF_000008645.1
Monoisolate
Complete Genome
Full
representative genome
Major
187,420
145,262
Methanothermobacter thermautotrophicus str. Delta H
strain=Delta H
null
Archaea
Euryarchaeota
Methanobacteria
Methanobacteriales
Methanobacteriaceae
Methanothermobacter
Methanothermobacter thermautotrophicus
true
Archaea
Euryarchaeota
0.99
1
0.9
1
1,751,377
1
49.54
1,751,377
1
1,876
533,233
89.684117
100
0.31
16.67
182
no
yes
yes
19
medium
143,000
0
GGGGTGGCATACCCATAGAGTCTGCCGATGGAAGGGAGTATGAGGTTAGAAACAGGGTTACCCTCTGCCGCTGCGGATTATCTGAGAACAAACCCTTCTGTGATGGAAGCCACTGGATGACTGCAGAGGAAAAACTTGAGTTTAAAAGAA
62Methanothermobacter thermautotrophicus str. Delta H
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,421,000
1
TCTATACGTTGTTAGGCAAGATAAATAAGTAAATACATGATGAGAAACCATGATTTTCTGTGTAAGACACATACAAATAATAGAAGGAAATTTATGAGAAAAATTCTAAATCTGACTTAGGAAGATCAACATGAACTCACATTTTACATT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,600,900
1
GTGTCCTCCTGCCTGGGGGGCCATTATCCAAATGAGCAAAGAGGACGGAGGTGTTTGTCCAAGCTGTCTTTGAGGGATGAAGCAGAGGTTGGCTCTGCTGGTAGGATCAGGGTTTTGGGTGATTTCCCCAGTGGTGAAGATGGACTCGTA
120homo sapiens
G000007765
ASM776v1
GCF_000007765.1
PRJNA57631
SAMN02603970
null
2005/07/22
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/765/GCF_000007765.1_ASM776v1
637,000,086
RS_GCF_000007765.2
Monoisolate
Complete Genome
Full
reference genome
Major
227,377
777
Coxiella burnetii RSA 493
strain=RSA 493
null
Bacteria
Proteobacteria
Gammaproteobacteria
Legionellales
Coxiellaceae
Coxiella
Coxiella burnetii
true
Eubacteria
Proteobacteria
1
0.995
0.9
1
2,032,674
2
42.6
1,995,281
1
2,058
613,036
88.849515
100
0
0
308
yes
yes
yes
20
high
1,683,890
0
AATATTACGCAATCCTCTGACAACACGTTTAAATATACATTCTCTAACGGAATTATCCTAAGCAGAGAAACAATTATTGATGAAAATCGCCCCCCCAATGAAGACGGTAGCGAGGAGGTTAAATTTTCATTAACCATACCTAAAGCGGAT
32Coxiella burnetii RSA 493 ASM776v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,367,200
1
CCAATTCTCATGGAGCTTATCGTTTAGAGGGAAAACAATACAAAAGTAAACAAGTAGGTGAGGATTTCTGAGTGTGCTAAGAACAAAGTAGAGCAGGGTACTGAGGTGTGAGCACATCAGTAGATTTCGTAGGAAAGGCCTTTCTTAGGA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,249,650
1
TCTCCACGGTGATCTTCAGCCTTTGCCATTGCTGGTCAGATTGAGGGGAGCAGAGCTTAGAGGAAGAGGGTTGGCGCTGAGGTTCCTTAAGGCCCCAGATCAGCTCCCTACTTGCTACAGTGGCAAGCTGCCTTACCTGCGCCTTACTTT
120homo sapiens
G000008565
ASM856v1
GCF_000008565.1
PRJNA57665
SAMN02603976
null
2000/12/11
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/565/GCF_000008565.1_ASM856v1
637,000,092
RS_GCF_000008565.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,230
1,299
Deinococcus radiodurans R1
strain=R1
null
Bacteria
Deinococcus-Thermus
Deinococci
Deinococcales
Deinococcaceae
Deinococcus
Deinococcus radiodurans
true
Eubacteria
Terrabacteria
1
0.991
0.8
1
3,284,156
4
66.61
2,648,638
1
3,248
987,980
88.625967
98.72
0
0
359
yes
yes
yes
20
high
1,931,930
0
GAAAACTGAGATTGGCCGAGCGCCACAGCCCCGGCAGCGGGCGGCGAAAGTTGAGGGCTCCGTCAGGCGAGGTCACGGCAGACAAAGGGGCAGAAGGCACCCGCGCAGGATGCCCTGTTACCGCCTTGCTCCGGGGTGGGGCGAACCGCT
35Deinococcus radiodurans R1 ASM856v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,435,750
1
GAGCCAGGCTGGCCATTTTTTCTCCCTCAGACGTGCCAAGTAAGTTGCTGTCCCTTCTGCCTGGACCCCCAGACAGTGCCCACCCTGTGACTTGAGAACCCCTTCTTTGCTCGTCACCCTTTATGAAGAAGACATCCCATCCCCTTCTGC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,507,450
1
TCTCAAAAAGAAAAAATAAAAGTATTCTATACTTTTGTTTTTGTAAACCAAAAGTAGCATATAACTATTGATGTGTTTATTGTCATTTGCTATATTTCTATGTTAATTATAAAAATGCTTCAAGCGGCCAGGCACGGTGGCTCATGCCTC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,474,600
1
CCCATCTTGTATAATCCCTTTTGTGGGGACACATGTTTTCAGTTTTCTTGGGCATATACCTAAGAGTGAAATTGCTCGGTCACATGGCAACTCCATGTTTAACCTTTTGAGGAACTGCCAGCCTGTTTTCCAAAGCTGCTGCACCATCTG
120homo sapiens