#genome
stringclasses
121 values
asm_name
stringclasses
120 values
assembly_accession
stringclasses
120 values
bioproject
stringclasses
45 values
biosample
stringclasses
120 values
wgs_master
float64
seq_rel_date
stringclasses
98 values
submitter
stringclasses
76 values
ftp_path
stringclasses
120 values
img_id
float64
637M
2.51B
gtdb_id
stringclasses
120 values
scope
stringclasses
3 values
assembly_level
stringclasses
1 value
genome_rep
stringclasses
1 value
refseq_category
stringclasses
3 values
release_type
stringclasses
2 values
taxid
float64
1.15k
681k
species_taxid
float64
7
911k
organism_name
stringclasses
120 values
infraspecific_name
stringclasses
112 values
isolate
stringclasses
1 value
superkingdom
stringclasses
2 values
phylum
stringclasses
18 values
class
stringclasses
30 values
order
stringclasses
56 values
family
stringclasses
75 values
genus
stringclasses
89 values
species
stringclasses
117 values
classified
bool
1 class
unique_name
stringclasses
121 values
lv1_group
stringclasses
2 values
lv2_group
stringclasses
13 values
score_faa
float64
0.93
1
score_fna
float64
0.88
1
score_rrna
float64
0.1
1
score_trna
float64
0.6
1
total_length
float64
618k
9.12M
contigs
float64
1
22
gc
float64
22.5
72.2
n50
float64
616k
9.03M
l50
float64
1
1
proteins
float64
525
7.92k
protein_length
float64
172k
2.68M
coding_density
float64
74
96.9
completeness
float64
76.3
100
contamination
float64
0
4.4
strain_heterogeneity
float64
0
100
markers
float64
124
383
5s_rrna
stringclasses
2 values
16s_rrna
stringclasses
1 value
23s_rrna
stringclasses
1 value
trnas
float64
14
20
draft_quality
stringclasses
2 values
start_position
int64
0
10M
autotrain_text
stringlengths
150
150
autotrain_label
class label
2 classes
G000007565
ASM756v2
GCF_000007565.2
PRJNA57843
SAMN02603999
null
2016/02/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
637,000,222
RS_GCF_000007565.2
Multiisolate
Complete Genome
Full
reference genome
Major
160,488
303
Pseudomonas putida KT2440
strain=KT2440
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas putida
true
Pseudomonas putida KT2440
Eubacteria
Proteobacteria
1
1
0.9
1
6,181,873
1
61.52
6,181,873
1
5,584
1,861,131
88.706707
99.97
1.2
0
381
yes
yes
yes
20
high
6,060,080
TGATGAAGCTGTGGGACATGCCAGAAGAGCTGTCGACTGCCTTGCGCTTCCAGCACGATCCGGCCTACGACGGCGAATATTTCGCGTTCCCCAACTTGGTGTGCCTGGCCACCCGCCTGCTGCGCTCGCGAGGTATAGGCTCAGGGCCGC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,486,250
GTGAGTTATTGCAGTGCCCTGGTAGCGGGCCCCGGTGTGCTCATCTGAAAATGAGGCCCTGCCAGGATCTTCCCCCAATGCCGCCCGGTGGAATGAAGATGCGGCCCCCCACCCTGAGTGCTGGTGAGAGACACAGCCAGCTGCCGCCTT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,034,850
AAATCTGAAACCCATTTGTTGCAAGAACTTTAAACTTCTTTGTGAATCTTTTGACCATACCTAAACTCACCTGCCTTTGAATCATGCATTCCTGGAAGCCCACAAAAAGGGTTTCCTATTCTGGACCATTAGTATTCAGCCAGGTCTCTC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,301,100
ACTTTGGGAGGCCGAAATGGGCAGATCACGAGGTCAGGAGATCGAGACCATCTTGGCTAACACGGTGAAACCCCGTTTCTACTAAAAATACAAAAAATTAGCTGGGTGTGTTGGCAGGCGCCTGTAGTCCCAGGTACTCAGGAGGCTGAG
11
G000009985
ASM998v1
GCF_000009985.1
PRJNA224116
SAMD00061077
null
2005/12/01
Tokyo University of Agriculture and Technology, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/985/GCF_000009985.1_ASM998v1
637,000,155
RS_GCF_000009985.1
Monoisolate
Complete Genome
Full
representative genome
Major
342,108
84,159
Magnetospirillum magneticum AMB-1
strain=AMB-1
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhodospirillales
Rhodospirillaceae
Magnetospirillum
Magnetospirillum magneticum
true
Magnetospirillum magneticum AMB-1
Eubacteria
Proteobacteria
1
1
0.9
1
4,967,148
1
65.09
4,967,148
1
4,628
1,522,305
90.298759
99
0
0
360
yes
yes
yes
20
high
2,289,170
TGAGCCCAATCTCACCGAACTGGGCATCTTCTCGGTGATGTGGTCCGAGCACTGCTCGTACAAGTCGTCGAAGAAGTGGCTTAAGACCCTGCCGACCAAGGCGCCGTGGGTGATCTGCGGCCCGGGCGAGAATGCCGGCATCATCGATAT
0no label
G000007845
ASM784v1
GCF_000007845.1
PRJNA57909
SAMN02603432
null
2003/04/30
J. Craig Venter Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/845/GCF_000007845.1_ASM784v1
637,000,014
RS_GCF_000007845.1
Monoisolate
Complete Genome
Full
reference genome
Major
198,094
1,392
Bacillus anthracis str. Ames
strain=Ames
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus anthracis
true
Bacillus anthracis str. Ames
Eubacteria
Firmicutes
1
1
1
1
5,227,293
1
35.38
5,227,293
1
5,474
1,495,110
84.244541
99.23
0.15
0
381
yes
yes
yes
20
high
2,621,970
TTTTTCCGCTTAAGTCAGCACCAGCTTTTAACATTTCTAAGCCGTATTTGTCAGCATCTACACCAGCGATTTCCGCTAATTCACGAGCTGCTGCTACGTCTTGCTCTGTGCAAGTTGGAGATTTGAATAGTAAAGAATCTGAAATGATTG
0no label
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Sinorhizobium meliloti 1021
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
1,361,360
GCGGCTACGTGAAGTATCGCAAAGGGCTGCTTGACGGCGGTGTCGAGCTCTACGAGCTCAAGGAGCGCGGTGATTTCTTCGATCGTCACCGTATGTCGCTGTTCGGAGCGCGAAACGCGAGCCTCCACACCAAGGCCTTCGTCGTCGATG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,551,100
ATCTCAAAAAAAAAAAAAAAGCAGTAAGTAGGCTGTTGATTTTGCAAGGGTAACTTGGCATTCTACTTCGTAACACTTGAGGATCCTGCCAGGACAAGCTAACATTTTCTCCTCTCTTCATGCAGAGTTTGGTTATCTGGGACAATGACA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,505,500
AACCATGGGGACGGGTCTTTCCCATGCTGTTCTCGTGATAGTGAATAAGTCTCACAAAATCTGATGGTTTTATAAAGGGCAGTTCCCCTGCACATGATTTCTTGCCTGCTGCCATGTAAGACATGCCTTCTCTTCTCCTTTGCCTTTCAC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,514,700
CAAAGGCATATCGCACTTTTTCTCTGGGGTTATTCGTCCCGGCTGAGAAGCACCGCGGTATCATGTGGTGATTGAGCAGCACCCAGCACATTCATGGCTGCGAGGCTTCCCGCGTGTGAACTCATTTAATCTTCTCAGTTCCTTGTGGGC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,652,050
TACCTCTCTTTCTGGACTTCTAACACCCCAGCCTTGCCTCAGATCTAAATTCTCTCCCTACTAGGAGGAATAAAATGTACCAAGTGTATAAAAATAGCTGCAAATACTCATGGAGCATTGTGCGCCAGATGTGGTGTCAGCTCTGTCCAT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,016,500
CTTGAAGACGGGAGCTCGCCCATCCCGGAAGGGGGCTAGGGGGGACCAGGGCCCGCGACAGGAAGCCTCCGCGCGACAGAAAAGCCCCGGGGGACCAGGCAGAGAGACCCGCAGGCCTAGCCCGCCCCGGAATCGCCCTGAGCCAGGTTC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,216,900
CGCGACAGACCAGGAAGGAGGCTGCAGTGGTGCCGGAGAGGTGGGCAGGGCCCGTGCTGCAGGGGGTCCCCGTTCCACTGGTGGGTGGGCTCCCCAGGTTGACAGCTCACAGCCAGCTTAATGGTGCCAGATGATGGCAGCTTCAGCCGA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
757,650
GTGAATGCCAGCAGAATCCAAAGCAGGGCCTGGGCCACTCGTGGAAGGCTCCCTAGGGCTAGTACAAGAGCCTCGTGGCAATCTTCTGAGTGGTAAAACCCATCTGTGTGGGACATGGAGTTTCAGCAACAGGAGTGAAAACACGTGTCC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,741,650
CTCAGTTTTGGTGGAGGTCATGGATTTAACCCTTAGAGAAACCGTGGGGCAAGACTCAAGCTCATGAAGCCATGAGACGGCGAACCCCACATGTGAAGGCACCAGCTGGTAGTGAATATTCCCTGGGGAGGCGACCTTGGTGTTAATTCA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,773,250
CAAATAAAATGAGTTTTAAATATTGTGGTATAGGAAAAACAGGGTGGGAAGGTCAGGGACAGGGGTTCTTTTAAAAGGGCAAAAAGAAACCAGGCTTGGAAAGAGTTGGGAGCTGGCTAATACAATTAATTGAATTATTGAACTAGTGAT
11
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Sinorhizobium meliloti 1021
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
2,984,280
CATGAGGCGGCTGTAGCCCACGACATCGGCTGCGAGAATGGCGGTGAGACGACGTTCCAACAGAGCCTCGATCTTCATCTTGTGGCCGAGCACGGTAATTTAACCTTTTCCTGTCGTCATGTCGTGCGGAGATAGAGCGACTTGGTGACG
0no label
G000008185
ASM818v1
GCF_000008185.1
PRJNA57583
SAMN02603967
null
2004/02/03
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/185/GCF_000008185.1_ASM818v1
637,000,327
RS_GCF_000008185.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,275
158
Treponema denticola ATCC 35405
strain=ATCC 35405
null
Bacteria
Spirochaetes
Spirochaetia
Spirochaetales
Spirochaetaceae
Treponema
Treponema denticola
true
Treponema denticola ATCC 35405
Eubacteria
Spirochaetes
1
1
1
1
2,843,201
1
37.87
2,843,201
1
2,578
885,778
91.799314
100
0
0
281
yes
yes
yes
20
high
1,316,250
AAATTTTTCGGTCTCTTTTAGCGCCTCATTAAAATCTTTTATGTTTTCGATAAAAAAGCAGTGCAGATTGTTTTCTTCAAAATACTTGTGCGGCACGTCCTTCATAAAGTCCGAAACTTGTTCCGGCTCGGTCTTAAAAAACTCTTTTGC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,817,550
GCCGGCCAGACTCCCCACAGGCCATGCGTGCTCAAACACCCCAAATTATCTACATGATTCTCAGTGTTACATGCACCCCAGGAGTCCCCCACTGGCCCAGGCTTCCTGGACTGTGACCCCTGGGTCCAAGGGCAGTAGGCCCAAACGTGG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,542,650
CCAGGCCTTGCTTTCCCCGCAGGCCCTGGCCTCCTGCTCATTCCCTGAATCCCCCAGCTCTTTCCCACATGGAGCTCTCTGCACTCTCTGGTGGTTAAGGACAAGTCATTGCAGAGAGGGCAGCTTGGAAAAGAAGGAAAAGAGCAAAGA
11
G000009125
ASM912v1
GCF_000009125.1
PRJNA224116
SAMEA3138192
null
2003/05/06
Genoscope
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/125/GCF_000009125.1_ASM912v1
637,000,231
RS_GCF_000009125.1
Multiisolate
Complete Genome
Full
representative genome
Major
267,608
305
Ralstonia solanacearum GMI1000
strain=GMI1000
null
Bacteria
Proteobacteria
Betaproteobacteria
Burkholderiales
Burkholderiaceae
Ralstonia
Ralstonia solanacearum
true
Ralstonia solanacearum GMI1000
Eubacteria
Proteobacteria
1
0.998
0.9
1
5,810,922
2
66.98
3,716,413
1
5,062
1,725,241
87.482692
99.94
0
0
373
yes
yes
yes
20
high
3,798,470
GGCATCCCGACCGACACGCCGGTGCACCGTGCCCGCGAGCGCCATGCCGACGCCACCGTCTTCACGCTGGCCACGGTGCGCTCGCACGACCAGTACAACACGACCATCTACGGCATGGATGACCGCTACCGCGGCGTGTTCGGCCAGCGC
0no label
G000007145
ASM714v1
GCF_000007145.1
PRJNA57887
SAMN02603845
null
2002/05/24
Sao Paulo state (Brazil) Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/145/GCF_000007145.1_ASM714v1
637,000,344
RS_GCF_000007145.1
Monoisolate
Complete Genome
Full
reference genome
Major
190,485
339
Xanthomonas campestris pv. campestris str. ATCC 33913
strain=ATCC 33913
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xanthomonas
Xanthomonas campestris
true
Xanthomonas campestris pv. campestris str. ATCC 33913
Eubacteria
Proteobacteria
1
1
0.9
1
5,076,188
1
65.07
5,076,188
1
4,292
1,472,146
85.453159
99.64
0
0
358
yes
yes
yes
20
high
2,482,220
TTGTCGATAGCACAAGAGATAGATGATGATGGGCACAAGAGTAAAATGGTCGCCGATTTTATCGAGCGCCAACTATCATGGCTTGGCCCACAAACCGCACTTGACAGCAAGTCAACGCTTGAAAGGGTTTCAGCGGTGACCATACAAGAA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,250,600
CACCCCCAGGTGAGCATCTGACAGACTGGAACAGCACCCACATGCCCAGCTGAGCCTGTGACAGCCTCGAACAGCACCCTGCACCCCCAGGGGAGCATCTGACAGCCTGGAACAGCACGCACACACCCAGGTGAGCATCTGACCGCCTCG
11
G000008865
ASM886v1
GCF_000008865.1
PRJNA57781
SAMN01911278
null
2004/05/11
GIRC
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/865/GCF_000008865.1_ASM886v1
637,000,108
RS_GCF_000008865.1
Monoisolate
Complete Genome
Full
reference genome
Major
386,585
562
Escherichia coli O157:H7 str. Sakai
strain=Sakai substr. RIMD 0509952
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Enterobacteriaceae
Escherichia
Escherichia coli
true
Escherichia coli O157:H7 str. Sakai Sakai substr. RIMD 0509952
Eubacteria
Proteobacteria
1
0.996
0.9
1
5,594,477
3
50.48
5,498,450
1
5,399
1,663,868
87.620737
99.97
0.33
0
374
yes
yes
yes
20
high
2,845,440
AAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCGGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACGCAAT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
136,650
ATATATAAATATATATGTACATATTTTTAATATAAAATACTAAACAAAGTACACCAAAATATTAGCTCCTATGTTAGTGAGATAATGTTTTGTTTTTTTGTATTTTAAGTTTTACATAGTAGGTGTATTTTTCTGTTTTCATACTGCTAT
11
G000010145
ASM1014v1
GCF_000010145.1
PRJNA224116
SAMD00060917
null
2008/04/15
Kitasato Institute for Life Sciences
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/145/GCF_000010145.1_ASM1014v1
641,522,633
RS_GCF_000010145.1
Monoisolate
Complete Genome
Full
representative genome
Major
334,390
1,613
Lactobacillus fermentum IFO 3956
strain=IFO 3956
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Lactobacillaceae
Lactobacillus
Lactobacillus fermentum
true
Lactobacillus fermentum IFO 3956
Eubacteria
Firmicutes
1
1
1
1
2,098,685
1
51.47
2,098,685
1
2,094
609,422
85.544424
99.18
0.82
50
290
yes
yes
yes
20
high
926,250
TAAGAATTCGGCCAGCAATATTTAAAATGAGGAGCGATTTTTTTGGATAAGCGGATTTACATTGATAACGCCGGCACCACCAAGACGGCCCCGGAGGTCATTGAAACGATGACCGAAGCGCTGGAGACGACTTGGGGGAACGCCTCGACG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,803,000
GGGTGACAGTGAGACCTTGTCTCAAAAAAGAAAAAATCAGTTAGAAAAACAAACAAACAAACAAACAAACAAACAAAAAATATATATATATATAAAAAAAATCAGAGATGATAAAATGGAATCATAAAAAATGCCCAATTCAAAAAAGAT
11
G000008645
ASM864v1
GCF_000008645.1
PRJNA224116
SAMN02603244
null
1999/12/22
Genome Therapeutics Corporation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/645/GCF_000008645.1_ASM864v1
638,154,510
RS_GCF_000008645.1
Monoisolate
Complete Genome
Full
representative genome
Major
187,420
145,262
Methanothermobacter thermautotrophicus str. Delta H
strain=Delta H
null
Archaea
Euryarchaeota
Methanobacteria
Methanobacteriales
Methanobacteriaceae
Methanothermobacter
Methanothermobacter thermautotrophicus
true
Methanothermobacter thermautotrophicus str. Delta H
Archaea
Euryarchaeota
0.99
1
0.9
1
1,751,377
1
49.54
1,751,377
1
1,876
533,233
89.684117
100
0.31
16.67
182
no
yes
yes
19
medium
1,211,860
ATTCCTCAGGGGCGGAGCAGGAAAATAAACCCCAAAATTTTTTCTTTTTGATGCTGTACAGGAGCAGAGAATGTGAAATAACTGAGGGTAGAAATTAAGAGTCTTCGAAGCTTATCTGGAGTATCTCAATAAGTTCTATGGATATACAGA
0no label
G000007465
ASM746v2
GCF_000007465.2
PRJNA57947
SAMN02604090
null
2011/09/01
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/465/GCF_000007465.2_ASM746v2
637,000,288
RS_GCF_000007465.2
Monoisolate
Complete Genome
Full
reference genome
Major
210,007
1,309
Streptococcus mutans UA159
strain=UA159
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus mutans
true
Streptococcus mutans UA159
Eubacteria
Firmicutes
1
1
0.9
1
2,032,925
1
36.83
2,032,925
1
1,897
591,301
85.692487
100
0
0
308
yes
yes
yes
20
high
798,460
ACATTATTGATTTCTATTGGAAGAATGCAGTTCCGTCTGATTGGACCTACATGTTTGATCAGCCTTTTGAAACTGCTGAAGCTGTTCAAGAACGTCTCCAAGATTATGAAAAATCCGAAAACCCTTATTTTTTTGCCATTCGTGACAAAG
0no label
G000010165
ASM1016v1
GCF_000010165.1
PRJNA224116
SAMD00060942
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
643,692,011
RS_GCF_000010165.1
Monoisolate
Complete Genome
Full
representative genome
Major
358,681
1,393
Brevibacillus brevis NBRC 100599
strain=NBRC 100599 (= 47)
null
Bacteria
Firmicutes
Bacilli
Bacillales
Paenibacillaceae
Brevibacillus
Brevibacillus brevis
true
Brevibacillus brevis NBRC 100599
Eubacteria
Firmicutes
1
1
1
1
6,296,436
1
47.27
6,296,436
1
5,917
1,875,522
87.757979
99.73
0.27
0
381
yes
yes
yes
20
high
5,385,380
GTACAGCTTTTCCAGTGTTCTGATCGCCGCTTGGCTTAGCTCGCTTTCTGTTATTTCTGTCGAGGAGAAGGAGCGGGGAACCAAATGCGCTTGTGATTCAACCCGAGATTGCGTGAACATCTCCGGGGTTACACCCATCATCCATACTGC
0no label
G000007565
ASM756v2
GCF_000007565.2
PRJNA57843
SAMN02603999
null
2016/02/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
637,000,222
RS_GCF_000007565.2
Multiisolate
Complete Genome
Full
reference genome
Major
160,488
303
Pseudomonas putida KT2440
strain=KT2440
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas putida
true
Pseudomonas putida KT2440
Eubacteria
Proteobacteria
1
1
0.9
1
6,181,873
1
61.52
6,181,873
1
5,584
1,861,131
88.706707
99.97
1.2
0
381
yes
yes
yes
20
high
4,193,410
GGCCCACCCCCACATTGTGGAGAGGTTGGAGGCGCGGCTGGCGGGTCGGGAATCCATGTCCATGCGCAGCATTCAGATTGAAGGCTGAACTCTAGGGGAGTCTCTATATGGCAAGTGGTTGGTGAACATACCCTTCCGCCAATGCGGCTA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,514,550
CGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTTCTGACCTTGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCCGGGATTACAGGCGTGAGCCACTGCGCCCGGCCTGAAGGTGCCTTTTTAAGGCAGAGTGCCCTGCCCTTGTGT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,236,300
ACTGACTACATTAGTATCAGAAAAAGCAGCGGTTCCCAACAAAGAGCATTATGAGTGAGAAAGAACAGTTCATCATGAGAGCAGGGTCACAGGGTCAATTAATCACAAAGAGACAACAAATGTAAAGGCATCTACTAAAAGAGCTCAAGA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,215,500
AATCAGACTAAGGGCTTATTTTGATCATAATCTCCTTTACTCTGAACCCTACCTACCCTGTTTTGGCTAAGTGACAGATTTTGGCCTTCCTCTACCCAGGCTTACCACCCCCAACCTGTACTGAAGCTCTGTCGTATCATGAGATGAAGT
11
G000010185
ASM1018v1
GCF_000010185.1
PRJNA224116
SAMD00060918
null
2008/02/14
Kitasato Institute for Life Sciences
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/185/GCF_000010185.1_ASM1018v1
641,522,627
RS_GCF_000010185.1
Monoisolate
Complete Genome
Full
representative genome
Major
334,413
1,260
Finegoldia magna ATCC 29328
strain=ATCC 29328
null
Bacteria
Firmicutes
Tissierellia
Tissierellales
Peptoniphilaceae
Finegoldia
Finegoldia magna
true
Finegoldia magna ATCC 29328
Eubacteria
Firmicutes
1
0.995
1
1
1,986,740
2
32.07
1,797,577
1
1,846
611,719
90.720879
99.39
0
0
282
yes
yes
yes
20
high
1,472,250
TTTCAAATAATCATTGTTCTTTTTTACGATGTCACTCATTTTATTCCTCGTTTAGATATCGTTCAATTTCGTCGGTGTATATTTTTATTTGATATAAATATCTGTCGTACATTTCGTGGAGTTGCTTGTATCGTTCGGCAGTTTTTTGTT
0no label
G000006865
ASM686v1
GCF_000006865.1
PRJNA57671
SAMN02603339
null
2001/03/21
INRA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/865/GCF_000006865.1_ASM686v1
637,000,144
RS_GCF_000006865.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,623
1,358
Lactococcus lactis subsp. lactis Il1403
strain=IL1403
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Lactococcus
Lactococcus lactis
true
Lactococcus lactis subsp. lactis Il1403 IL1403
Eubacteria
Firmicutes
1
1
1
1
2,365,589
1
35.33
2,365,589
1
2,383
693,662
86.378488
100
0
0
310
yes
yes
yes
20
high
2,137,460
GCTTCTTGCCTGAAAATTATATGGTTAATTCTTTCCATCATCAAGTCATTAAAGATTTGGGCCAAGGCTTGACGGCCATTGCTCATGGAAACGATGGCTTAGTTGAAGCGATTGAAAATAAAGAAAAACATGTGCTTGCTGTCCAATGGC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,885,350
CAGCCCCACCCCCATCCTCCAGGAAGGAGAGAGGGGCTAGAAATTGTGTTAATAATTAATTATGCCTGCATGATGAAACCTCCATAAAAACCCCTGAACAACAGGGCTTAGAGACTTCCTGGGTTGATGAACACGTCGGAATGTCTAGAG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,631,400
TAAAAACCCAGCCCAGTTCATGGCTCCTTTGGCAGCAACCCTGACACGCTTTACAGCCCTAGACCCTAAAAGGTCAAAAGGCCGTCTTATTCTCAAAATACATTTTATTAACCAATCTGCTCCCGACATTAAATAAAACTCCAAAAATTA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,919,700
GAGGCCCTCACGCAAGAACGAGAAGGCCAAGAGTGAGTGGGAGCCCTGGGGTGGGGACAAATCAGAGTCCCTGGGGGGACACGACGGTAGGGACCCTCCCAGGGCAGCCACTGATGGCTGAGGAGCAGCGAGACCCTAGGCCTGGACACC
11
G000007465
ASM746v2
GCF_000007465.2
PRJNA57947
SAMN02604090
null
2011/09/01
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/465/GCF_000007465.2_ASM746v2
637,000,288
RS_GCF_000007465.2
Monoisolate
Complete Genome
Full
reference genome
Major
210,007
1,309
Streptococcus mutans UA159
strain=UA159
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus mutans
true
Streptococcus mutans UA159
Eubacteria
Firmicutes
1
1
0.9
1
2,032,925
1
36.83
2,032,925
1
1,897
591,301
85.692487
100
0
0
308
yes
yes
yes
20
high
739,960
GCAGTGTAAAAGTGAGCATTAAAACCGTATAACTATACGCCATACGGTTTTAATATGTTCTCCAAAGTGATTATTTTTGATAGTTTAATAATTGAAATTTAGAAAGGTTGTGATTTCCTTATCCAGATTGTTAGTCAGTCGGCGCTATCT
0no label
G000006725
ASM672v1
GCF_000006725.1
PRJNA224116
SAMN02603773
null
2004/06/04
Sao Paulo state (Brazil) Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/725/GCF_000006725.1_ASM672v1
637,000,348
RS_GCF_000006725.1
Monoisolate
Complete Genome
Full
representative genome
Major
160,492
2,371
Xylella fastidiosa 9a5c
null
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xylella
Xylella fastidiosa
true
Xylella fastidiosa 9a5c
Eubacteria
Proteobacteria
0.98
0.993
0.9
1
2,731,750
3
52.62
2,679,306
1
2,664
765,931
82.59299
99.59
0.18
0
325
yes
yes
yes
20
high
1,500,070
TGCTGTTATGAGGCTTATTGCTGAGTGGAGAGCGCTCATTTCATGAGTTTTCCTCCTGGGAGAGGAGTTGCCACAACGCTCTGCATTTCGGTTTTGGCCAATCTGTGCGTTCATTTTTCCTATCTCGATGGTGCTTGCCATGTGTCACCA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,552,850
ATGGAGGTGAGGAAGATCAGGTTTCTGCCCCTGGAGAGCTCCATCCTGGGTCAACAGCAGACATGGATCAGACCTGCTTGTCAAGGTGAAACTTACCACTACACACAGCTGGGCACAAGAACAGAGATCTGGGGTCTCAGGGCAGCTCTG
11
G000010605
ASM1060v1
GCF_000010605.1
PRJNA224116
SAMD00060929
null
2008/04/08
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
641,522,653
RS_GCF_000010605.1
Monoisolate
Complete Genome
Full
representative genome
Major
455,632
1,911
Streptomyces griseus subsp. griseus NBRC 13350
strain=NBRC 13350
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces griseus
true
Streptomyces griseus subsp. griseus NBRC 13350
Eubacteria
Actinobacteria
1
1
1
1
8,545,929
1
72.23
8,545,929
1
7,113
2,547,362
87.837226
99.84
0
0
357
yes
yes
yes
20
high
7,545,070
CGCACCGCTGCTCGCCGCGCTGCCGACCGGCGCGGACCTCGATCCGGCCGCCGCCTCCGGCGCCGCGGAGCCCAGGGTCACCGCCCCGAGGTGCGGCGCTCCCGGCGGTACCGGGACGGTCGACTCCCGGCCATGATCCAGGCAAAAGGC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,242,550
GTCCCACTGCACTCCGCCACCCCCCTACCACGCCGACCCCAGCCTCGTCAGGTGCGTGGGCTGCCGAGGGCCTGAGCATGTGCTGTCACCCTGTCTGTTCACCTCTGTCCTTCTGGCCATGTCAGCTGCCCTGCCCCACCCTGTGTGCTC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,079,750
CACCCAACAATTTTTTGTAGAGCTGGGGTTTCACCATACTGCCCAGGCTGGTCTCAGACTCCTGGGCTCAAGCAATCTGCCCAGCTTGGCCTCTCAAAATGTTGGGACTACAGGTGTGGGCCACCATGCCTGGACAAAAATAAATAAATA
11
G000009905
ASM990v1
GCF_000009905.1
PRJNA224116
SAMD00061067
null
2004/09/02
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/905/GCF_000009905.1_ASM990v1
637,000,306
RS_GCF_000009905.1
Monoisolate
Complete Genome
Full
representative genome
Major
292,459
2,734
Symbiobacterium thermophilum IAM 14863
strain=IAM14863
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Symbiobacteriaceae
Symbiobacterium
Symbiobacterium thermophilum
true
Symbiobacterium thermophilum IAM 14863 IAM14863
Eubacteria
Firmicutes
1
1
1
1
3,566,135
1
68.67
3,566,135
1
3,297
1,051,001
86.832243
98.02
0.03
0
347
yes
yes
yes
20
high
535,990
TGGCCACCCGCCAGGGCTGCGCCAGCCAGACCGCCAGCGCGATGACGGCAATCTGGAGCAGCGCGGGCAGAGGCGGCGGCAGCGGCTCCCCCTTCCCCGGCAGCTCCAGCGGCAGCAAGAGGGCCGCGCCGGCCACCAGCGCGAGCGACA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,974,400
GTCAGCTGGCCTAAAGGAGGCAGGAAGAGGGGGCGAGGAGGAGGCCGTGGGCACAGCCAGGCCAGTGACCCAGCAAGCACACAGGCACGGGGCCTACCGCCTTGCCACGGGTTTGCAAAACAGTTTGGGGGAAAAAATGGTTTTAAAATG
11
G000007985
ASM798v2
GCF_000007985.2
PRJNA57743
SAMN02603989
null
2012/07/31
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/985/GCF_000007985.2_ASM798v2
637,000,120
RS_GCF_000007985.2
Monoisolate
Complete Genome
Full
reference genome
Major
243,231
35,554
Geobacter sulfurreducens PCA
strain=PCA
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfuromonadales
Geobacteraceae
Geobacter
Geobacter sulfurreducens
true
Geobacter sulfurreducens PCA
Eubacteria
Proteobacteria
1
1
1
1
3,814,128
1
60.94
3,814,128
1
3,417
1,176,369
90.878544
99.35
0
0
363
yes
yes
yes
20
high
2,774,330
ATCGGGACACTACCTTGCTACCGGCAGCCCCGCCTCCTTCCACTCGACGAACAGCGACTGGAATATTGAGGGATAGGCGAGGCCGATCAGCTTCTTGTAGGCCATGTAGCTGCGGCTGCCCGTATTGCAGTAGACAATGATCTTCTTTTC
0no label
G000006605
ASM660v1
GCF_000006605.1
PRJNA224116
SAMEA3283089
null
2005/06/27
Bielefeld Univ
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/605/GCF_000006605.1_ASM660v1
637,000,085
RS_GCF_000006605.1
Monoisolate
Complete Genome
Full
representative genome
Major
306,537
38,289
Corynebacterium jeikeium K411
strain=K411 = NCTC 11915
null
Bacteria
Actinobacteria
Actinobacteria
Corynebacteriales
Corynebacteriaceae
Corynebacterium
Corynebacterium jeikeium
true
Corynebacterium jeikeium K411 K411 = NCTC 11915
Eubacteria
Actinobacteria
1
0.996
1
1
2,476,822
2
61.35
2,462,499
1
2,137
751,284
89.378688
100
0.68
0
319
yes
yes
yes
20
high
1,932,710
TCCACGTTGAAGCTCGGCTCGGCCTCGGCGACCTCATCCTTAGGTACGACGTTCCGATCGGTCTCCCGCAAAATCTTCGAGATACGATTGTGGATAGTCCGCGGTGAAAACACGTGCTGGTCGGGACGTGTGGGCGTCAATTCGCAAAGA
0no label
G000009185
ASM918v1
GCF_000009185.1
PRJNA224116
SAMEA3138195
null
2006/06/22
Max Planck Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/185/GCF_000009185.1_ASM918v1
637,000,129
RS_GCF_000009185.1
Monoisolate
Complete Genome
Full
na
Major
362,976
293,091
Haloquadratum walsbyi DSM 16790
strain=DSM 16790 = HBSQ001
null
Archaea
Euryarchaeota
Halobacteria
Haloferacales
Haloferacaceae
Haloquadratum
Haloquadratum walsbyi
true
Haloquadratum walsbyi DSM 16790 DSM 16790 = HBSQ001
Archaea
Euryarchaeota
1
0.997
0.9
1
3,179,361
2
47.86
3,132,494
1
3,071
845,315
78.317152
99.3
0
0
220
no
yes
yes
19
medium
984,750
GGAGTCAGGAGAGTATATTGAAAAAGGCTCATTCGTGATTCGAGGCGATAGGACATACATTCGAGATGTCGCCGCGGAAATAGCAGTTGGAATTCAGTGCGCGGATGAAACACAGGTAATCGGTGGTCCCCCATCGGCAATTGCGGATCG
0no label
G000010165
ASM1016v1
GCF_000010165.1
PRJNA224116
SAMD00060942
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
643,692,011
RS_GCF_000010165.1
Monoisolate
Complete Genome
Full
representative genome
Major
358,681
1,393
Brevibacillus brevis NBRC 100599
strain=NBRC 100599 (= 47)
null
Bacteria
Firmicutes
Bacilli
Bacillales
Paenibacillaceae
Brevibacillus
Brevibacillus brevis
true
Brevibacillus brevis NBRC 100599
Eubacteria
Firmicutes
1
1
1
1
6,296,436
1
47.27
6,296,436
1
5,917
1,875,522
87.757979
99.73
0.27
0
381
yes
yes
yes
20
high
664,170
GAGCGCGCTATCAATAATTGTACGATTGGATAAATCAGTTACTGTTAATTGGACTTGTGTGTTATCAAAGTCATTACTAAATTTACGCTGTTTATTGGATTGGAGTTTGAGATTACGGATTGCGATATAATATGGAATTTTATCTTTGCC
0no label
G000007305
ASM730v1
GCF_000007305.1
PRJNA224116
SAMN02604284
null
2002/02/27
Utah Genome Center
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/305/GCF_000007305.1_ASM730v1
638,154,515
RS_GCF_000007305.1
Monoisolate
Complete Genome
Full
representative genome
Major
186,497
2,261
Pyrococcus furiosus DSM 3638
strain=DSM 3638
null
Archaea
Euryarchaeota
Thermococci
Thermococcales
Thermococcaceae
Pyrococcus
Pyrococcus furiosus
true
Pyrococcus furiosus DSM 3638
Archaea
Euryarchaeota
1
1
0.9
0.9
1,908,256
1
40.77
1,908,256
1
2,102
594,193
91.722127
99.5
0
0
195
yes
yes
yes
19
high
654,290
GCTTTTCTAACGGTATTACGCACAACAAGAACTTTCTTCCCATTCTTTAGAATCTTCTTAATGTCATTAAGAACATCTGTAATATCCCCCTCAACTAATCTGACTTTTACATTTCCCCTTGAAGGTTTATTCTTGTCATTCTTATCCACA
0no label
G000007865
ASM786v1
GCF_000007865.1
PRJNA224116
SAMN02604086
null
2004/01/30
Univ. Minnesota
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/865/GCF_000007865.1_ASM786v1
637,000,168
RS_GCF_000007865.1
Monoisolate
Complete Genome
Full
representative genome
Major
262,316
1,764
Mycobacterium avium subsp. paratuberculosis K-10
strain=K-10
null
Bacteria
Actinobacteria
Actinobacteria
Corynebacteriales
Mycobacteriaceae
Mycobacterium
Mycobacterium avium
true
Mycobacterium avium subsp. paratuberculosis K-10
Eubacteria
Actinobacteria
1
1
1
1
4,829,781
1
69.3
4,829,781
1
4,544
1,497,326
91.345322
99.28
0.33
0
336
yes
yes
yes
20
high
2,787,330
GTACTCCGCCTTCGCTGACATCCGCACCCTCAGGATTGTGCCACCCGGAGCGGCGATTTCGATGCAGCCTGGCTGACCCGGCGGGCTACCCGCGTGATTCGAGCAGGTCGATCACCCGCTGCGCCTGCTCCTCGACGGTGCCGTCCGGGA
0no label
G000009745
ASM974v1
GCF_000009745.1
PRJNA224116
SAMD00061075
null
2003/10/03
NHRI, Taiwan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/745/GCF_000009745.1_ASM974v1
637,000,337
RS_GCF_000009745.1
Multiisolate
Complete Genome
Full
representative genome
Major
196,600
672
Vibrio vulnificus YJ016
strain=YJ016
null
Bacteria
Proteobacteria
Gammaproteobacteria
Vibrionales
Vibrionaceae
Vibrio
Vibrio vulnificus
true
Vibrio vulnificus YJ016
Eubacteria
Proteobacteria
1
0.996
1
1
5,260,086
3
46.68
3,354,505
1
4,639
1,553,759
87.03525
100
0.14
0
369
yes
yes
yes
20
high
4,083,560
CTTATTCATATCTTTATGGGATGAATTGGAGGTGAGTCATATCTATGACTCATTACTTATGGTATTTTTTAGCTTCTGTTGAGCCCTGATTACAAGTGGGGCTTTGCTGTTACAGGAGTTTTCTATGTCACACAAAATCGAATCACATGC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,471,450
GAATAAAGTACTGATACATGCTATAATGTTGGTTAAACTTGAAAATATGATGATGTCCCGGTGTGGTAGCTCACACCTATAATCCCAGCACTTTGGGAGGCCGAGGCAGTTGGATCACCTGAGGTCAGCTCAGGACCAGCTGGGCCAACA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,614,000
CCTGGGAGACAGAGGTTGCAGTGAGCTGAGATAGATCACGCCACTTCACTCCAGCCTGGGTGACAGAGTGAGACTCTGTCTTTAAATAAAAAAAAAAAAAAAAAAAAAGAGGACTAGTATGGTCCTGGCTGGAGCCGTGGCCCTGTTTGG
11
G000008505
ASM850v1
GCF_000008505.1
PRJNA58089
SAMN02598265
null
2004/12/27
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/505/GCF_000008505.1_ASM850v1
637,000,023
RS_GCF_000008505.1
Monoisolate
Complete Genome
Full
reference genome
Major
281,309
1,428
[Bacillus thuringiensis] serovar konkukian str. 97-27
strain=97-27
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus thuringiensis
true
[Bacillus thuringiensis] serovar konkukian str. 97-27
Eubacteria
Firmicutes
1
0.998
1
1
5,314,794
2
35.37
5,237,682
1
5,361
1,516,528
84.049767
99.07
0.31
0
381
yes
yes
yes
20
high
4,292,210
AATAAGTCTGCCATATCTGCTCCTTCTTCTTTAGATACATCTCCTAGGCTAAACGCATGACTGACCGCAACACGTCCGTCCCAACTAGCCTCCTCTGTATACTGAGCTAACTTTTTAATTGTATAAATACCTAAATGCCCTGCATCATGT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,360,250
AGTCTTGAACTTCTGGGCTCAAGCAATCCTCCCACTTCGGCCTCCCAAAAGGCTGGGATTATAGACATGAGCCACCGCACCCGGCCCACTCCTGTTTTTTCACAACACAGTTCATCTCCTCTACTCCCAAGAGTTTGATCAAGGCTTTGG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,444,600
AATCTTCTAGCTGAAACAGCGTCACTGCGGGCTCCAATCACACTTGAAGATGTCCAGGTGCACTGAGTGACCTGGCCTCCTCGCTGTGCAGGCCTTGCCTTCCTAATCAGATGCTGGATGCTGCTGCCCCGCCCCTCAGCTTGAAGGGCC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,597,000
TGATTTCTGTCTTCTGGACTTTGGAAAATGTGATGGTTATGGGAGGCCGCTATGGTCACCTTACAGCCATGTGGGTCCAGCCCAAGGTCATAGCATGGTTGAGCCGAGAGAAGGAACCCAGCTGACATCAACCCTACCTCCAGACTTCTT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,091,700
GCTCACCTGCGACATTTGGAAGTACAAAAGAACTTCACCGAAGAAGCGTTGTTCTAATGGAAAAATGAGGGCAAAGAAATTAAATCTCCTTTAAGAAAACCACTTACTTAAAAAATATGGCTTACATTTTTTAAGCGTTTTATCTCTGCT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,942,700
GAGTCGTAATTTAAAGCGTGTGTGTATATGGACTTTGTCCCTTAAGGTCGATATAAAGAATCCTCGCAGAATCACAGACCTGTGCCGCCCGCCACCTTCTGCCATTGTTACATTACAGATTTGGTTTAGTTTCGTTTTGTTTTGTTTTTT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,645,400
GCTGAGGACTTCGTCAGGTGTCAGGACTCGGGACAGCAGGACCCTCAGGCAGTAGGGCTCCAAGCACCAGCCCCTCGCCCCAGTCCCAGCAGGTGGCCTCCCCAACTTGAGCTGGGTTCATTTCCTCTCTCCACCCCTTCTTTCTTCTCA
11
G000010565
ASM1056v1
GCA_000010565.1
PRJDA19023
SAMD00060921
null
2007/05/07
Marine Biotechnology Institute Co., Ltd
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/565/GCA_000010565.1_ASM1056v1
640,427,128
GB_GCA_000010565.1
Monoisolate
Complete Genome
Full
na
Major
370,438
110,500
Pelotomaculum thermopropionicum SI
strain=SI
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Peptococcaceae
Pelotomaculum
Pelotomaculum thermopropionicum
true
Pelotomaculum thermopropionicum SI
Eubacteria
Firmicutes
0.98
1
1
1
3,025,375
1
52.96
3,025,375
1
3,001
887,464
86.415667
100
0.63
0
331
yes
yes
yes
20
high
1,964,170
TCCACAACCCTGGCCACAATCCTGTTCACCCTTTCCCGGCGGTTGCGGTAAAGGGCATCGCGTTCCTTGCCGGGCTGCACGCCGCAGCGCCTGCTTACCGCCGGGTCCCCTTCAAGAACTAAAAGGGCCTCTGCCCTGCTCAAAGGAGGG
0no label
G000009825
ASM982v1
GCF_000009825.1
PRJNA224116
SAMD00061074
null
2004/12/30
Kao Corporation, Biological Science Laboratories, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/825/GCF_000009825.1_ASM982v1
637,000,019
RS_GCF_000009825.1
Monoisolate
Complete Genome
Full
representative genome
Major
66,692
79,880
Bacillus clausii KSM-K16
strain=KSM-K16
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus clausii
true
Bacillus clausii KSM-K16
Eubacteria
Firmicutes
1
1
1
1
4,303,871
1
44.75
4,303,871
1
4,304
1,270,194
86.940919
98.67
0.33
0
373
yes
yes
yes
20
high
268,970
ATCAAACGTGTGGAAGAGGCAATGGCTGGAGAGGGACGGATCCTTGTACGCCCATCTGGCACCGAACCACTTGTGCGTGTGATGGTCGAAGCCAAAACCGACGAGTTGTGCCAACAGTACGCAAACCAAATTGTTGATGTCGTAAAAGAA
0no label
G000007805
ASM780v1
GCF_000007805.1
PRJNA57967
SAMN02604017
null
2003/03/05
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/805/GCF_000007805.1_ASM780v1
2,508,501,074
RS_GCF_000007805.1
Multiisolate
Complete Genome
Full
reference genome
Major
223,283
251,701
[Pseudomonas syringae] pv. tomato str. DC3000
strain=DC3000
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas syringae group genomosp. 3
true
[Pseudomonas syringae] pv. tomato str. DC3000
Eubacteria
Proteobacteria
1
0.997
0.9
1
6,538,260
3
58.34
6,397,126
1
5,862
1,948,843
87.825109
100
0.22
0
381
yes
yes
yes
20
high
5,971,810
TGATAGGAAGCCTTGTTGGCCTTGCCCAGGTTCAATGAAGAACCCACTGCATCGCGGAACGGGCCGTAATAGGCGCTGGCGTACTTGGCCGAGTAGGCCATGATCCGCACGTTGACATGCCCGGCCAGCTCCAGAGACTCGCGGATGGCC
0no label
G000009345
ASM934v1
GCF_000009345.1
PRJNA57741
SAMEA1705958
null
2007/01/12
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/345/GCF_000009345.1_ASM934v1
640,069,335
RS_GCF_000009345.1
Monoisolate
Complete Genome
Full
reference genome
Major
393,305
630
Yersinia enterocolitica subsp. enterocolitica 8081
strain=8081
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia enterocolitica
true
Yersinia enterocolitica subsp. enterocolitica 8081
Eubacteria
Proteobacteria
1
0.998
0.9
1
4,683,620
2
47.22
4,615,899
1
4,253
1,352,606
85.086813
99.95
0
0
373
yes
yes
yes
20
high
2,233,270
AACAGCTTGATAACCGCATTAATCAGGCCGAGTGTGAGTGCCACGGCCAGTGACAACAGCATCACGCACAGTGATAAGCCCGCCCCTTGTGCCAGTAACGGCAAATAGTCTGCGACCATTATCGACCTCCCAAGGCTAACCAACGGCAAC
0no label
G000010605
ASM1060v1
GCF_000010605.1
PRJNA224116
SAMD00060929
null
2008/04/08
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
641,522,653
RS_GCF_000010605.1
Monoisolate
Complete Genome
Full
representative genome
Major
455,632
1,911
Streptomyces griseus subsp. griseus NBRC 13350
strain=NBRC 13350
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces griseus
true
Streptomyces griseus subsp. griseus NBRC 13350
Eubacteria
Actinobacteria
1
1
1
1
8,545,929
1
72.23
8,545,929
1
7,113
2,547,362
87.837226
99.84
0
0
357
yes
yes
yes
20
high
168,220
TCCTCACCCTGCGATTCCGCGATGCCTCCGCCGCCGACCAGGCCCGGGAACTACTCGCCGCCAAGGGAGAACAGCTCCACACGGCCGAAACCGCTCCACACGCGGTGAGTATCCGGCTCGCCCGCCCCGGGGCCGATGGAGAGACGCTGC
0no label
G000006845
ASM684v1
GCF_000006845.1
PRJNA57611
SAMN02604088
null
2005/02/14
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/845/GCF_000006845.1_ASM684v1
637,000,188
RS_GCF_000006845.1
Monoisolate
Complete Genome
Full
reference genome
Major
242,231
485
Neisseria gonorrhoeae FA 1090
strain=FA 1090
null
Bacteria
Proteobacteria
Betaproteobacteria
Neisseriales
Neisseriaceae
Neisseria
Neisseria gonorrhoeae
true
Neisseria gonorrhoeae FA 1090
Eubacteria
Proteobacteria
1
1
1
1
2,153,922
1
52.69
2,153,922
1
2,142
609,210
83.31778
99.82
0.21
0
323
yes
yes
yes
20
high
1,162,460
TAAGGATCAAGCTTGAGCATGGTAACGTTCAAGCCGCGCGATTCGAGGATGGCGGCAATAGAAGCGGCGGCGATACCTTTACCCAGTGAGGAGACAACGCCGCCGGTTACGAAAATGAATTTGGTCATGATGGAATACCCATGTTGGAAT
0no label
G000007025
ASM702v1
GCF_000007025.1
PRJNA224116
SAMN02603141
null
2002/11/25
CNRS
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/025/GCF_000007025.1_ASM702v1
637,000,243
RS_GCF_000007025.1
Monoisolate
Complete Genome
Full
representative genome
Major
272,944
781
Rickettsia conorii str. Malish 7
strain=Malish 7
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rickettsiales
Rickettsiaceae
Rickettsia
Rickettsia conorii
true
Rickettsia conorii str. Malish 7
Eubacteria
Proteobacteria
1
1
0.9
1
1,268,755
1
32.44
1,268,755
1
1,435
347,621
80.686027
99.46
0.33
0
218
yes
yes
yes
20
high
241,280
CTCTAGAGTCATTTCCACGTCTTTTATCGGCATCCTTATATGGTTCAAATGCCATGATTAAAAGCTTCGCTATAAATATCCTTAGCATGGCTCGGAAGATGATTTTTAACTGAATCAGGTAAATCGTTATTATTCTTATAAGGCATAAAA
0no label
G000007785
ASM778v1
GCF_000007785.1
PRJNA57669
SAMN02603978
null
2003/03/28
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/785/GCF_000007785.1_ASM778v1
637,000,101
RS_GCF_000007785.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,185
1,351
Enterococcus faecalis V583
strain=V583
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Enterococcaceae
Enterococcus
Enterococcus faecalis
true
Enterococcus faecalis V583 ASM778v1
Eubacteria
Firmicutes
0.99
0.991
1
1
3,359,974
4
37.38
3,218,031
1
3,271
1,000,353
87.714339
99.53
0.31
0
309
yes
yes
yes
20
high
801,710
TCAACGTCATCCCAAATGGTTAGAGCAAGGAAGAATCGAGGGAAATGAATGAAAATTTTTGTCGATGGCGATGGTTCACCTGTGAAAGAGACGGTTATTGAAGTCGCTGTAGAGAAAGCTTTGGATGTGGTGATTGTTACTAGTGTAGAT
0no label
G000010565
ASM1056v1
GCA_000010565.1
PRJDA19023
SAMD00060921
null
2007/05/07
Marine Biotechnology Institute Co., Ltd
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/565/GCA_000010565.1_ASM1056v1
640,427,128
GB_GCA_000010565.1
Monoisolate
Complete Genome
Full
na
Major
370,438
110,500
Pelotomaculum thermopropionicum SI
strain=SI
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Peptococcaceae
Pelotomaculum
Pelotomaculum thermopropionicum
true
Pelotomaculum thermopropionicum SI
Eubacteria
Firmicutes
0.98
1
1
1
3,025,375
1
52.96
3,025,375
1
3,001
887,464
86.415667
100
0.63
0
331
yes
yes
yes
20
high
2,551,770
TTCCCTGCTTCACCATTACTACACCACCAGGCCCAACAACCCGTTGAAAGGCAAGCAGTCACTGGTGGCAATCTGCTGTAAACTGTTGCGCATCATCTTTGCTCTGAGCCAAAAGAAAATGGCCTACGATAAAAATATGGTTATTTCTCA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,240,650
ATAGGCCTGACACCTGAATCATTTTCCCAGACTGAGAATATTGGCCAGAAGCCCACTGTCTAGGGATGTGTGTAGGTAACAGCTGTTCTCTTTCATATAATACAGCAGGATGGGCACTGGGTGTTTCAGCTCTACCATTCACTCAGTGAG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,098,900
CTGGGTCTCAAAGGCTGGCTGGCAACAGGCTGCACCGGGCATGGGAATCCGCCAGCTGCGAGATTGGGGGTAAAGAGCTCAGACATGGTCAGAAGCCTCTGCCTAACACACGGCTCCAGTAGCCACTCCTCAGGCCTCCTGCGCCCTCGG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,190,850
CTTTTTTTGGGTATGCACAAAGTGCCAGGCACGTAGATCGTGTTTTCTCCTGGCCAGTTCTCCAGGCAGGAACTACTATATGCCCACTTTACAAGTGAGGAAACTGAGGCTCAGAGAGGCTAAGTGACTTGCCCAAATCCACACAGCAAG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
565,650
CCGAGAGCTGGGGGAGCCCAGGGCGGGGAGGGCGCGGCCGGAGCGAGCGCCGCCCGGGAAACCCGAGCCCCGCCAGGTGCGCGGGGACAAAGGCGGTGCCGGGAGGGCGGGTCCTGGGGGTCCCCCTGCCCCCTCTGCGGTGCGTTGGGA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,569,950
CTCGGTTTCCTTCCAATTCATTCTCGATTCCCAGATACTCAGATGAGAAATCCGCACTCAGGCCGTCAGGCTCCTGGGCCCGGGCCACCCTGCCTGCGCTCAGCCCGGCCCCTCCGCCGCAGCGCCTCGGAGTTTGGGGGCTACAGGGGA
11
G000006725
ASM672v1
GCF_000006725.1
PRJNA224116
SAMN02603773
null
2004/06/04
Sao Paulo state (Brazil) Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/725/GCF_000006725.1_ASM672v1
637,000,348
RS_GCF_000006725.1
Monoisolate
Complete Genome
Full
representative genome
Major
160,492
2,371
Xylella fastidiosa 9a5c
null
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xylella
Xylella fastidiosa
true
Xylella fastidiosa 9a5c
Eubacteria
Proteobacteria
0.98
0.993
0.9
1
2,731,750
3
52.62
2,679,306
1
2,664
765,931
82.59299
99.59
0.18
0
325
yes
yes
yes
20
high
324,740
GGGAACGTGGTCGATGTGTGCCCGGTCGGTGCATTGACGAACAAGGTATTTCAGTTCCGTGCTAGACCGTGGGAATTAATGGCCTACCAGTCGTTGGGGTATCACGATGCGATGGGTTCCAACTTATTTCTGCATGTGCGTCAGGGCGAA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,348,600
CACTTTATCTGTTCCCTCATACATATTTTTAGATTGAAAATGTAAATGTAGATAAACAGTGAGAAGTTTATTGAACCTGAGTTATGATTTGACCTAAGCCTGGACCCGAGATTTTGTAATATGATCAACAGGAAAAAGGTAAATCTGGGC
11
G000009765
ASM976v2
GCF_000009765.2
PRJNA224116
SAMD00061088
null
2016/03/24
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2
637,000,304
RS_GCF_000009765.2
Monoisolate
Complete Genome
Full
representative genome
Minor
227,882
33,903
Streptomyces avermitilis MA-4680 = NBRC 14893
strain=MA-4680
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces avermitilis
true
Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
Eubacteria
Actinobacteria
1
0.999
1
1
9,119,895
2
70.7
9,025,608
1
7,915
2,675,970
86.456522
99.89
0.79
0
356
yes
yes
yes
20
high
722,930
GGCGAGTCGGCGCTTCCACATCGCCCGCGAGCACGCGCGCACCTACCCTGCCTTCGACCAGCAGAACTTCGACCTCACCGCTTGATCACGAGCCTGCTTGCGGACAGACTGCGGCCCATGAAGTTCACGGGCGTGCCCGCCTGCGCGCAG
0no label
G000008545
ASM854v1
GCF_000008545.1
PRJNA57723
SAMN02603986
null
2001/01/09
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/545/GCF_000008545.1_ASM854v1
637,000,321
RS_GCF_000008545.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,274
2,336
Thermotoga maritima MSB8
strain=MSB8
null
Bacteria
Thermotogae
Thermotogae
Thermotogales
Thermotogaceae
Thermotoga
Thermotoga maritima
true
Thermotoga maritima MSB8 ASM854v1
Eubacteria
Bacteria
1
1
0.9
1
1,860,725
1
46.25
1,860,725
1
1,866
602,696
95.430706
100
1.79
100
312
yes
yes
yes
20
high
1,022,190
GATCGTCTTTTGGAAGAGAGAACATGCTGGAGGCGAGTAAACTCAAAGCTTCCGCATCTTTGAGTATCTGTTTGTTCTCTTCGTAGAGCGTTCTCAACGGGTGCCCATTCGGGAGCTTCTCTATTTCTCTTCCGGCTTCTGATACGGCTC
0no label
G000010425
ASM1042v1
GCF_000010425.1
PRJNA224116
SAMD00061080
null
2006/12/05
Gifu University, Life Science Research Center, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/425/GCF_000010425.1_ASM1042v1
639,633,010
RS_GCF_000010425.1
Monoisolate
Complete Genome
Full
representative genome
Major
367,928
1,680
Bifidobacterium adolescentis ATCC 15703
strain=ATCC 15703
null
Bacteria
Actinobacteria
Actinobacteria
Bifidobacteriales
Bifidobacteriaceae
Bifidobacterium
Bifidobacterium adolescentis
true
Bifidobacterium adolescentis ATCC 15703
Eubacteria
Actinobacteria
1
1
1
1
2,089,645
1
59.18
2,089,645
1
1,683
614,966
86.722338
100
0
0
284
yes
yes
yes
20
high
546,780
TCGGCTCCGCACTGAATCTGGTCGATGTCGATACCGTGCTGCTGGGCGGTTGGTGGACCGATTTCGGGCCGTTCTTCTACGAAACGCTCGAAAACCGTTTGGAATCGCAGGTCTTGGGGGCGTCGGACATGCAGGTGAGCGTGTCCATCC
0no label
G000009205
ASM920v1
GCF_000009205.1
PRJNA57679
SAMEA1705932
null
2006/09/20
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/205/GCF_000009205.1_ASM920v1
640,069,308
RS_GCF_000009205.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,563
1,496
Clostridioides difficile 630
strain=630
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Peptostreptococcaceae
Clostridioides
Clostridioides difficile
true
Clostridioides difficile 630 ASM920v1
Eubacteria
Firmicutes
1
0.998
0.9
1
4,298,133
2
29.06
4,290,252
1
3,829
1,209,268
82.891874
99.51
0.37
0
340
yes
yes
yes
20
high
3,569,150
ATGATAAATGTATATATTTTTTTAGGAGGTATTATAATTGGATACTAAAAAAGTCACATTTTCTTCAATGTGCATAGTTATTAATATTGTCTTAGGTATGGTTATATCTATGATAAATATACCATTATTATTTTTAGATACAGTTGGTAC
0no label
G000010605
ASM1060v1
GCF_000010605.1
PRJNA224116
SAMD00060929
null
2008/04/08
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
641,522,653
RS_GCF_000010605.1
Monoisolate
Complete Genome
Full
representative genome
Major
455,632
1,911
Streptomyces griseus subsp. griseus NBRC 13350
strain=NBRC 13350
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces griseus
true
Streptomyces griseus subsp. griseus NBRC 13350
Eubacteria
Actinobacteria
1
1
1
1
8,545,929
1
72.23
8,545,929
1
7,113
2,547,362
87.837226
99.84
0
0
357
yes
yes
yes
20
high
3,001,960
CGGCGGCGGCCACCGGCCCCGGGTGCGGCGGCAGGAACGCGTGGGTCATCGACAGGCCCGCCAGCAGCGGCATCGCGTAGAGCAGGATCGATTTGCCGGAGCGCTTGGCGGCGGCGTACACGATCGGCGCGAGGACGAAGATGCCGACGT
0no label
G000009205
ASM920v1
GCF_000009205.1
PRJNA57679
SAMEA1705932
null
2006/09/20
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/205/GCF_000009205.1_ASM920v1
640,069,308
RS_GCF_000009205.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,563
1,496
Clostridioides difficile 630
strain=630
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Peptostreptococcaceae
Clostridioides
Clostridioides difficile
true
Clostridioides difficile 630 ASM920v1
Eubacteria
Firmicutes
1
0.998
0.9
1
4,298,133
2
29.06
4,290,252
1
3,829
1,209,268
82.891874
99.51
0.37
0
340
yes
yes
yes
20
high
199,680
GTATGAGTGATTTAAGTATAAAAGATATGGATTTATTAGCTGTATGTATAGGTCCAGGTTCGTTTACAGGACTTAGAATAGGTATGGCTACAGTAAAAGCTATGGCCCATGTAAATAATATACCAATAATAGCAGTAAATTCTTTGGAAT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,823,150
GAGGCCGTTGATCCTCTGGCTGGGGACAGGGGCATCCTGAGATGAGGATGGAGCAGAGAAGCTGGACCTGTCGGTTTGGACTCTTTGTCAGGGTGTTGACCAAACACAGCAAGCCCTGTGGTGGGGAACAGGAGGGTGAGATGTATCCCT
11
G000008925
ASM892v1
GCF_000008925.1
PRJNA58233
SAMN02604111
null
2006/03/30
University College Cork
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/925/GCF_000008925.1_ASM892v1
637,000,143
RS_GCF_000008925.1
Monoisolate
Complete Genome
Full
reference genome
Major
362,948
1,624
Lactobacillus salivarius UCC118
strain=UCC118
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Lactobacillaceae
Lactobacillus
Lactobacillus salivarius
true
Lactobacillus salivarius UCC118
Eubacteria
Firmicutes
1
0.986
1
1
2,133,977
4
33.04
1,827,111
1
2,106
630,045
86.976336
99.48
0.52
0
292
yes
yes
yes
20
high
1,949,870
ATTAACATAAAAGGATACTTAGTCTTATTATAGGTCTGCTGGGCTAACAATTTTTATCTTAGCTTTCCTGTAATCTTTAATATTCCTTGTTAAGATAAAATCTACTTCATTAGAGATAGCTGTTTCAACCATAACGGCATCTTCATAATC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,250,250
CAGCGGTAATCTCTTCCTTCCTCAAATGTTCATGCTGCCTTCCTGGTTGTATTTATATGTATAAATAACTGCAAAATAGGATTAAAAGTGAGGCCCTGACTCCCCAGTGAACCTGCAAGCTCCTTCAGGCCCGAGCCTTGATGTGCTTTT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,928,000
CCGCCTCTACTAAAAATACAAAAAAAAAAAAAAAATTAGCCGGGCGTGGTGGCGGGCACCTGTAGTCCTAGCTACTCGGGAGGCTGAGGCTAGAGAATGGCATGAACCAGGGAGGCAGAGCTTGCAGTGAGCCGAGATCACACCATTGCA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,199,400
GACCCAAGACCAAGACCCTGCCCCAGGCGAAGGAGAGGCAAGCTCCACAAAGAAGGCTCCTTGGCGCCATGTTAGGGTGCACCGTTGGGGGGTCCATGGGGGACCTTCTTTCCAGGAGCTGTTTCTCACCACTTCTTAGACATTCTGAAG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,882,450
GATGAATGGTGGTGATGGTGATGTGATGATGATGGTGATGGGATGGTGATGGTGATAAAGATGACAATAACGGTGATGAAGATGATAATGGTGATGTCAGTGATGATGGTGATGGAAGTGATGGTGACTATGATGATGATAAGGACGGTC
11
G000010605
ASM1060v1
GCF_000010605.1
PRJNA224116
SAMD00060929
null
2008/04/08
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
641,522,653
RS_GCF_000010605.1
Monoisolate
Complete Genome
Full
representative genome
Major
455,632
1,911
Streptomyces griseus subsp. griseus NBRC 13350
strain=NBRC 13350
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces griseus
true
Streptomyces griseus subsp. griseus NBRC 13350
Eubacteria
Actinobacteria
1
1
1
1
8,545,929
1
72.23
8,545,929
1
7,113
2,547,362
87.837226
99.84
0
0
357
yes
yes
yes
20
high
3,273,790
TGACCCCATGAAGCTGCTGACCGTGAACATCGGGCAACCTCGCCCCTCCGACCGGACCGACGGCCCGGGGGGCGTCACCGGGATCGACAAGCGACCGGTGGAGGGCCCGGTCGAGGTCCTCGACCCCGGGCCCAGGGGCAGCGGCGGCAG
0no label
G000006865
ASM686v1
GCF_000006865.1
PRJNA57671
SAMN02603339
null
2001/03/21
INRA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/865/GCF_000006865.1_ASM686v1
637,000,144
RS_GCF_000006865.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,623
1,358
Lactococcus lactis subsp. lactis Il1403
strain=IL1403
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Lactococcus
Lactococcus lactis
true
Lactococcus lactis subsp. lactis Il1403 IL1403
Eubacteria
Firmicutes
1
1
1
1
2,365,589
1
35.33
2,365,589
1
2,383
693,662
86.378488
100
0
0
310
yes
yes
yes
20
high
1,596,140
CATTGGTTGGTTCGTCAAGCAAAAGCACATTGGGTTGTAATAATAAAATTTTAAGTAAATAGAGTCGTTTTTTCTCACCACCTGAAAGTTTAGAAATCAGTGTTCCATGACTACTTCTTGGGAAGAGAAACTGCTCTAATAAATTAACAA
0no label
G000009985
ASM998v1
GCF_000009985.1
PRJNA224116
SAMD00061077
null
2005/12/01
Tokyo University of Agriculture and Technology, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/985/GCF_000009985.1_ASM998v1
637,000,155
RS_GCF_000009985.1
Monoisolate
Complete Genome
Full
representative genome
Major
342,108
84,159
Magnetospirillum magneticum AMB-1
strain=AMB-1
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhodospirillales
Rhodospirillaceae
Magnetospirillum
Magnetospirillum magneticum
true
Magnetospirillum magneticum AMB-1
Eubacteria
Proteobacteria
1
1
0.9
1
4,967,148
1
65.09
4,967,148
1
4,628
1,522,305
90.298759
99
0
0
360
yes
yes
yes
20
high
3,419,390
GGGTGGCTACGCCCCCATGGTCGCGGCCGATTATGCCCGTTTCTCGCTGCCGGACTCCTTGCGGATGGACTACGACGAGCTTATCGAACTCATCGCCAACTCGGTGCGCATCCGCGTGGGAGGCGCGGCCGAACTGATCCTCCCCATCGA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,834,500
GAAATAGGAGCAGATACGTTACCTCCGCTTGCCAGATAAGAAACTGGGACGCAGATGGATGGACTACCTGAGAGTTGTAGATAACATTTTCCTGTTCATGGGGTGGAGGACCTGGCCCTGAGAGGACAGGATCCCTCCTGCTCCTGCCAG
11
G000008865
ASM886v1
GCF_000008865.1
PRJNA57781
SAMN01911278
null
2004/05/11
GIRC
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/865/GCF_000008865.1_ASM886v1
637,000,108
RS_GCF_000008865.1
Monoisolate
Complete Genome
Full
reference genome
Major
386,585
562
Escherichia coli O157:H7 str. Sakai
strain=Sakai substr. RIMD 0509952
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Enterobacteriaceae
Escherichia
Escherichia coli
true
Escherichia coli O157:H7 str. Sakai Sakai substr. RIMD 0509952
Eubacteria
Proteobacteria
1
0.996
0.9
1
5,594,477
3
50.48
5,498,450
1
5,399
1,663,868
87.620737
99.97
0.33
0
374
yes
yes
yes
20
high
5,222,750
CTTCTTCGATACGAATGTTGTTTGACATGTGAACCTTCTTTTTCAAGCTGCCAATGATTTGCTTTAAACACACAGAATATATGTGGTTTCGAATGTTTTTCGACCGACGATTATCCCCTGCATCGACCGAATATCCGAGATCATATGCTG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
730,200
CTTTGGACTCATCGTAGGAGAAGTCCTGGGGGGATGGAACCCGCCCCCTCAGTGCCCACCCCAGGGGCCCTGCTACCCTCCGTGCTTTCCCGGAGCACAGGTGGGGGTGAGGTCCTTGTCTGAGGCTGCCACACGGCCCACGGACCACAC
11
G000008645
ASM864v1
GCF_000008645.1
PRJNA224116
SAMN02603244
null
1999/12/22
Genome Therapeutics Corporation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/645/GCF_000008645.1_ASM864v1
638,154,510
RS_GCF_000008645.1
Monoisolate
Complete Genome
Full
representative genome
Major
187,420
145,262
Methanothermobacter thermautotrophicus str. Delta H
strain=Delta H
null
Archaea
Euryarchaeota
Methanobacteria
Methanobacteriales
Methanobacteriaceae
Methanothermobacter
Methanothermobacter thermautotrophicus
true
Methanothermobacter thermautotrophicus str. Delta H
Archaea
Euryarchaeota
0.99
1
0.9
1
1,751,377
1
49.54
1,751,377
1
1,876
533,233
89.684117
100
0.31
16.67
182
no
yes
yes
19
medium
314,080
GATTATGCGGGGAGACTTCAGAAGCCCTGCAATTTCCCTCGCATATCTGGTGCTGGCACCCACTGTTATCCCGGACGTCATGCCCCTTATGAGTTCGTCGGCGAAGTTGGGACCGGATATGCTGAATACTGTCCTGGACCCTGTTTCCTC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,373,100
ATTCAGTCACATGCTCACACATACATGCACTCACAGTCACATGCTCACACATACAAGCACTCACACTCAACCTTACACACCCACATACATGCACTCACACTCAACCTTACACACCCACATACATGCACTCACACACAAGGCACTCTCACA
11
G000007565
ASM756v2
GCF_000007565.2
PRJNA57843
SAMN02603999
null
2016/02/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
637,000,222
RS_GCF_000007565.2
Multiisolate
Complete Genome
Full
reference genome
Major
160,488
303
Pseudomonas putida KT2440
strain=KT2440
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas putida
true
Pseudomonas putida KT2440
Eubacteria
Proteobacteria
1
1
0.9
1
6,181,873
1
61.52
6,181,873
1
5,584
1,861,131
88.706707
99.97
1.2
0
381
yes
yes
yes
20
high
5,911,880
ACGGCACGAGGAACACAGCGTTCTCGTCAGGGCGGCAGATCATGTCGATGTCTGCCGGGTCGAGCAGTTCGTAATAGATGTCGTCGTCGACGTAGTCGCCGGTCACGGTCTGCAGCAGCACGCTCTCGGGCAGCCGCATGCCTTTTTCAG
0no label