# Copyright (c) 2022, salesforce.com, inc. # All rights reserved. # SPDX-License-Identifier: BSD-3-Clause # For full license text, see the LICENSE file in the repo root or https://opensource.org/licenses/BSD-3-Clause model: arch: blip2_protein_mistral model_type: pretrain_protein_mistral7b load_pretrained: True # intialize stage 2 pretraining from stage 1 pretrained model pretrained: "/cluster/home/wenkai/LAVIS/lavis/output/BLIP2/Pretrain_stage2/20240423090/checkpoint_1.pth" freeze_vit: True max_protein_len: 1000 max_txt_len: 150 num_query_token: 32 get_eval: True esm_size: "3b" datasets: GO_protein_function: text_processor: train: name: "blip_caption" run: task: image_text_pretrain # optimizer lr_sched: "linear_warmup_cosine_lr" init_lr: 0 min_lr: 0 warmup_lr: 0 weight_decay: 0.05 max_epoch: 1 batch_size_train: 1 batch_size_eval: 1 num_workers: 8 warmup_steps: 1000 seed: 42 output_dir: "output/BLIP2/pretrain_test_eval" amp: True resume_ckpt_path: null evaluate: False train_splits: ["train"] valid_splits: ['val'] device: "cuda" world_size: 1 dist_url: "env://" distributed: True