# Copyright (c) 2022, salesforce.com, inc. # All rights reserved. # SPDX-License-Identifier: BSD-3-Clause # For full license text, see the LICENSE file in the repo root or https://opensource.org/licenses/BSD-3-Clause model: arch: blip2_protein model_type: pretrain load_pretrained: False #pretrain from scratch #pretrained: 'lavis/output/BLIP2/Pretrain_stage1/20231118115/checkpoint_4.pth' freeze_vit: True max_protein_len: 1000 max_txt_len: 150 num_query_token: 32 esm_size: "3b" datasets: GO_protein_function: text_processor: train: name: "blip_caption" run: task: image_text_pretrain # optimizer lr_sched: "linear_warmup_cosine_lr" init_lr: 1e-4 min_lr: 1e-5 warmup_lr: 1e-6 weight_decay: 0.05 max_epoch: 5 batch_size_train: 64 batch_size_eval: 64 num_workers: 8 warmup_steps: 1000 seed: 42 output_dir: "output/BLIP2/Pretrain_stage1" amp: True resume_ckpt_path: null evaluate: False train_splits: ["train"] device: "cuda" world_size: 1 dist_url: "env://" distributed: True