import numpy as np def create_grid(resX, resY, resZ, b_min=np.array([0, 0, 0]), b_max=np.array([1, 1, 1]), transform=None): ''' Create a dense grid of given resolution and bounding box :param resX: resolution along X axis :param resY: resolution along Y axis :param resZ: resolution along Z axis :param b_min: vec3 (x_min, y_min, z_min) bounding box corner :param b_max: vec3 (x_max, y_max, z_max) bounding box corner :return: [3, resX, resY, resZ] coordinates of the grid, and transform matrix from mesh index ''' coords = np.mgrid[:resX, :resY, :resZ] coords = coords.reshape(3, -1) coords_matrix = np.eye(4) length = b_max - b_min coords_matrix[0, 0] = length[0] / resX coords_matrix[1, 1] = length[1] / resY coords_matrix[2, 2] = length[2] / resZ coords_matrix[0:3, 3] = b_min coords = np.matmul(coords_matrix[:3, :3], coords) + coords_matrix[:3, 3:4] if transform is not None: coords = np.matmul(transform[:3, :3], coords) + transform[:3, 3:4] coords_matrix = np.matmul(transform, coords_matrix) coords = coords.reshape(3, resX, resY, resZ) return coords, coords_matrix def batch_eval(points, eval_func, num_samples=512 * 512 * 512): num_pts = points.shape[1] sdf = np.zeros(num_pts) num_batches = num_pts // num_samples for i in range(num_batches): sdf[i * num_samples:i * num_samples + num_samples] = eval_func( points[:, i * num_samples:i * num_samples + num_samples]) if num_pts % num_samples: sdf[num_batches * num_samples:] = eval_func(points[:, num_batches * num_samples:]) return sdf def eval_grid(coords, eval_func, num_samples=512 * 512 * 512): resolution = coords.shape[1:4] coords = coords.reshape([3, -1]) sdf = batch_eval(coords, eval_func, num_samples=num_samples) return sdf.reshape(resolution) def eval_grid_octree(coords, eval_func, init_resolution=64, threshold=0.01, num_samples=512 * 512 * 512): resolution = coords.shape[1:4] sdf = np.zeros(resolution) dirty = np.ones(resolution, dtype=np.bool) grid_mask = np.zeros(resolution, dtype=np.bool) reso = resolution[0] // init_resolution while reso > 0: # subdivide the grid grid_mask[0:resolution[0]:reso, 0:resolution[1]:reso, 0:resolution[2]:reso] = True # test samples in this iteration test_mask = np.logical_and(grid_mask, dirty) #print('step size:', reso, 'test sample size:', test_mask.sum()) points = coords[:, test_mask] sdf[test_mask] = batch_eval(points, eval_func, num_samples=num_samples) dirty[test_mask] = False # do interpolation if reso <= 1: break for x in range(0, resolution[0] - reso, reso): for y in range(0, resolution[1] - reso, reso): for z in range(0, resolution[2] - reso, reso): # if center marked, return if not dirty[x + reso // 2, y + reso // 2, z + reso // 2]: continue v0 = sdf[x, y, z] v1 = sdf[x, y, z + reso] v2 = sdf[x, y + reso, z] v3 = sdf[x, y + reso, z + reso] v4 = sdf[x + reso, y, z] v5 = sdf[x + reso, y, z + reso] v6 = sdf[x + reso, y + reso, z] v7 = sdf[x + reso, y + reso, z + reso] v = np.array([v0, v1, v2, v3, v4, v5, v6, v7]) v_min = v.min() v_max = v.max() # this cell is all the same if (v_max - v_min) < threshold: sdf[x:x + reso, y:y + reso, z:z + reso] = (v_max + v_min) / 2 dirty[x:x + reso, y:y + reso, z:z + reso] = False reso //= 2 return sdf.reshape(resolution)