from os import write import time import pandas as pd import base64 from typing import Sequence import streamlit as st from sklearn.metrics import classification_report # from models import create_nest_sentences, load_summary_model, summarizer_gen, load_model, classifier_zero import models as md from utils import plot_result, plot_dual_bar_chart, examples_load, example_long_text_load import json ex_text, ex_license, ex_labels, ex_glabels = examples_load() ex_long_text = example_long_text_load() # if __name__ == '__main__': st.markdown("### Long Text Summarization & Multi-Label Classification") st.write("This app summarizes and then classifies your long text with multiple labels using [BART Large MNLI](https://huggingface.co/facebook/bart-large-mnli). The keywords are generated using [KeyBERT](https://github.com/MaartenGr/KeyBERT).") st.write("__Inputs__: User enters their own custom text and labels.") st.write("__Outputs__: A summary of the text, likelihood percentages for each label and a downloadable csv of the results. \ Includes additional options to generate a list of keywords and/or evaluate results against a list of ground truth labels, if available.") example_button = st.button(label='See Example') if example_button: example_text = ex_long_text #ex_text display_text = 'Excerpt from Frankenstein:' + example_text + '"\n\n' + "[This is an excerpt from Project Gutenberg's Frankenstein. " + ex_license + "]" input_labels = ex_labels input_glabels = ex_glabels else: display_text = '' input_labels = '' input_glabels = '' with st.form(key='my_form'): st.markdown("##### Step 1: Upload Text") text_input = st.text_area("Input any text you want to summarize & classify here (keep in mind very long text will take a while to process):", display_text) text_csv_expander = st.expander(label=f'Want to upload multiple texts at once? Expand to upload your text files below.', expanded=False) with text_csv_expander: st.markdown('##### Choose one of the options below:') st.write("__Option A:__") uploaded_text_files = st.file_uploader(label="Upload file(s) that end with the .txt suffix", accept_multiple_files=True, key = 'text_uploader', type = 'txt') st.write("__Option B:__") uploaded_csv_text_files = st.file_uploader(label='Upload a CSV file with columns: "title" and "text"', accept_multiple_files=False, key = 'csv_text_uploader', type = 'csv') if text_input == display_text and display_text != '': text_input = example_text st.text("\n\n\n") st.markdown("##### Step 2: Enter Labels") labels = st.text_input('Enter possible topic labels, which can be either keywords and/or general themes (comma-separated):',input_labels, max_chars=2000) labels = list(set([x.strip() for x in labels.strip().split(',') if len(x.strip()) > 0])) labels_csv_expander = st.expander(label=f'Prefer to upload a list of labels instead? Click here to upload your CSV file.',expanded=False) with labels_csv_expander: uploaded_labels_file = st.file_uploader("Choose a CSV file with one column and no header, where each cell is a separate label", key='labels_uploader') gen_keywords = st.radio( "Generate keywords from text (independent from the above labels)?", ('Yes', 'No') ) st.text("\n\n\n") st.markdown("##### Step 3: Provide Ground Truth Labels (_Optional_)") glabels = st.text_input('If available, enter ground truth topic labels to evaluate results, otherwise leave blank (comma-separated):',input_glabels, max_chars=2000) glabels = list(set([x.strip() for x in glabels.strip().split(',') if len(x.strip()) > 0])) glabels_csv_expander = st.expander(label=f'Have a file with labels for the text? Click here to upload your CSV file.', expanded=False) with glabels_csv_expander: st.markdown('##### Choose one of the options below:') st.write("__Option A:__") uploaded_onetext_glabels_file = st.file_uploader("Choose a CSV file with one column and no header, where each cell is a separate label", key = 'onetext_glabels_uploader') st.write("__Option B:__") uploaded_multitext_glabels_file = st.file_uploader('Or Choose a CSV file with two columns "title" and "label", with the cells in the title column matching the name of the files uploaded in step #1.', key = 'multitext_glabels_uploader') threshold_value = st.slider( 'Select a threshold cutoff for matching percentage (used for ground truth label evaluation)', 0.0, 1.0, (0.5)) submit_button = st.form_submit_button(label='Submit') st.write("_For improvments/suggestions, please file an issue here: https://github.com/pleonova/multi-label-summary-text_") with st.spinner('Loading pretrained models...'): start = time.time() summarizer = md.load_summary_model() s_time = round(time.time() - start,4) start = time.time() classifier = md.load_model() c_time = round(time.time() - start,4) start = time.time() kw_model = md.load_keyword_model() k_time = round(time.time() - start,4) st.success(f'Time taken to load various models: {k_time}s for KeyBERT model & {s_time}s for BART summarizer mnli model & {c_time}s for BART classifier mnli model.') if submit_button or example_button: if len(text_input) == 0 and uploaded_text_files is None and uploaded_csv_text_files is None: st.error("Enter some text to generate a summary") else: # OPTION A: if uploaded_text_files is not None: st.markdown("### Text Inputs") st.write('Files concatenated into a dataframe:') file_names = [] raw_texts = [] for uploaded_file in uploaded_text_files: text = str(uploaded_file.read(), "utf-8") raw_texts.append(text) title_file_name = uploaded_file.name.replace('.txt','') file_names.append(title_file_name) text_df = pd.DataFrame({'title': file_names, 'text': raw_texts}) st.dataframe(text_df.head()) st.download_button( label="Download data as CSV", data=text_df.to_csv().encode('utf-8'), file_name='title_text.csv', mime='title_text/csv', ) # OPTION B: [TO DO: DIRECT CSV UPLOAD INSTEAD] with st.spinner('Breaking up text into more reasonable chunks (transformers cannot exceed a 1024 token max)...'): # For each body of text, create text chunks of a certain token size required for the transformer text_chunks_lib = dict() for i in range(0, len(text_df)): nested_sentences = md.create_nest_sentences(document=text_df['text'][i], token_max_length=1024) # For each chunk of sentences (within the token max) text_chunks = [] for n in range(0, len(nested_sentences)): tc = " ".join(map(str, nested_sentences[n])) text_chunks.append(tc) title_entry = text_df['title'][i] text_chunks_lib[title_entry] = text_chunks if gen_keywords == 'Yes': st.markdown("### Top Keywords") with st.spinner("Generating keywords from text..."): kw_dict = dict() for key in text_chunks_lib: for text_chunk in text_chunks_lib[key]: keywords_list = md.keyword_gen(kw_model, text_chunk) kw_dict[key] = dict(keywords_list) kw_df0 = pd.DataFrame.from_dict(kw_dict).reset_index() kw_df0.rename(columns={'index': 'keyword'}, inplace=True) kw_df = pd.melt(kw_df0, id_vars=['keyword'], var_name='title', value_name='score').dropna() kw_df = kw_df[kw_df['score'] > 0.1][['title', 'keyword', 'score']].reset_index().drop(columns='index').sort_values(['title', 'score'], ascending=False) st.dataframe(kw_df) st.download_button( label="Download data as CSV", data=kw_df.to_csv().encode('utf-8'), file_name='title_kewyords.csv', mime='title_kewyords/csv', ) st.markdown("### Summary") with st.spinner(f'Generating summaries for {len(text_chunks)} text chunks (this may take a minute)...'): my_expander = st.expander(label=f'Expand to see intermediate summary generation details for {len(text_chunks)} text chunks') with my_expander: summary = [] st.markdown("_Once the original text is broken into smaller chunks (totaling no more than 1024 tokens, \ with complete sentences), each block of text is then summarized separately using BART NLI \ and then combined at the very end to generate the final summary._") for num_chunk, text_chunk in enumerate(text_chunks): st.markdown(f"###### Original Text Chunk {num_chunk+1}/{len(text_chunks)}" ) st.markdown(text_chunk) chunk_summary = md.summarizer_gen(summarizer, sequence=text_chunk, maximum_tokens = 300, minimum_tokens = 20) summary.append(chunk_summary) st.markdown(f"###### Partial Summary {num_chunk+1}/{len(text_chunks)}") st.markdown(chunk_summary) # Combine all the summaries into a list and compress into one document, again final_summary = " \n\n".join(list(summary)) st.markdown(final_summary) if len(text_input) == 0 or len(labels) == 0: st.error('Enter some text and at least one possible topic to see label predictions.') else: st.markdown("### Top Label Predictions on Summary vs Full Text") with st.spinner('Matching labels...'): topics, scores = md.classifier_zero(classifier, sequence=final_summary, labels=labels, multi_class=True) # st.markdown("### Top Label Predictions: Combined Summary") # plot_result(topics[::-1][:], scores[::-1][:]) # st.markdown("### Download Data") data = pd.DataFrame({'label': topics, 'scores_from_summary': scores}) # st.dataframe(data) # coded_data = base64.b64encode(data.to_csv(index = False). encode ()).decode() # st.markdown( # f'Download Data', # unsafe_allow_html = True # ) topics_ex_text, scores_ex_text = md.classifier_zero(classifier, sequence=text_input, labels=labels, multi_class=True) plot_dual_bar_chart(topics, scores, topics_ex_text, scores_ex_text) data_ex_text = pd.DataFrame({'label': topics_ex_text, 'scores_from_full_text': scores_ex_text}) data2 = pd.merge(data, data_ex_text, on = ['label']) if len(glabels) > 0: gdata = pd.DataFrame({'label': glabels}) gdata['is_true_label'] = int(1) data2 = pd.merge(data2, gdata, how = 'left', on = ['label']) data2['is_true_label'].fillna(0, inplace = True) st.markdown("### Data Table") with st.spinner('Generating a table of results and a download link...'): st.dataframe(data2) @st.cache def convert_df(df): # IMPORTANT: Cache the conversion to prevent computation on every rerun return df.to_csv().encode('utf-8') csv = convert_df(data2) st.download_button( label="Download data as CSV", data=csv, file_name='text_labels.csv', mime='text/csv', ) # coded_data = base64.b64encode(data2.to_csv(index = False). encode ()).decode() # st.markdown( # f'Click here to download the data', # unsafe_allow_html = True # ) if len(glabels) > 0: st.markdown("### Evaluation Metrics") with st.spinner('Evaluating output against ground truth...'): section_header_description = ['Summary Label Performance', 'Original Full Text Label Performance'] data_headers = ['scores_from_summary', 'scores_from_full_text'] for i in range(0,2): st.markdown(f"###### {section_header_description[i]}") report = classification_report(y_true = data2[['is_true_label']], y_pred = (data2[[data_headers[i]]] >= threshold_value) * 1.0, output_dict=True) df_report = pd.DataFrame(report).transpose() st.markdown(f"Threshold set for: {threshold_value}") st.dataframe(df_report) st.success('All done!') st.balloons()