import statistics import string import sys from dataclasses import dataclass, field from typing import List, Union, Tuple import nltk import torch from numpy.typing import NDArray from .type_aliases import DEVICE_TYPE, ENCODER_DEVICE_TYPE, NumSentencesType, EmbeddingSlicesType def get_gpu(gpu: DEVICE_TYPE) -> ENCODER_DEVICE_TYPE: """ Determine the correct GPU device based on the provided input. In the following, output 0 means CUDA device 0. Args: gpu (Union[bool, str, int, List[Union[str, int]]]): Input specifying the GPU device(s): - bool: If True, returns 0 if CUDA is available, otherwise returns "cpu". - str: Can be "cpu", "gpu", or "cuda" (case-insensitive). Returns 0 if CUDA is available and the input is not "cpu", otherwise returns "cpu". - int: Should be a valid GPU index. Returns the index if CUDA is available and valid, otherwise returns "cpu". - List[Union[str, int]]: List containing combinations of the str/int. Processes each element and returns a list of corresponding results. Returns: Union[str, int, List[Union[str, int]]]: Depending on the input type: - str: Returns "cpu" if no GPU is available or the input is "cpu". - int: Returns the GPU index if valid and CUDA is available. - List[Union[str, int]]: Returns a list of strings and/or integers based on the input list. Raises: ValueError: If the input gpu type is not recognized or invalid. ValueError: If a string input is not one of ["cpu", "gpu", "cuda"]. ValueError: If an integer input is outside the valid range of GPU indices. Notes: - This function checks CUDA availability using torch.cuda.is_available() and counts available GPUs using torch.cuda.device_count(). - Case insensitivity is maintained for string inputs ("cpu", "gpu", "cuda"). - The function ensures robust error handling for invalid input types or out-of-range indices. """ # Ensure gpu index is within the range of total available gpus gpu_available = torch.cuda.is_available() gpu_count = torch.cuda.device_count() correct_strs = ["cpu", "gpu", "cuda"] def _get_single_device(gpu_item): if isinstance(gpu_item, bool): return 0 if gpu_item and gpu_available else "cpu" elif isinstance(gpu_item, str): if gpu_item.lower() not in correct_strs: raise ValueError(f"Wrong gpu type: {gpu_item}. Should be one of {correct_strs}") return 0 if (gpu_item.lower() != "cpu") and gpu_available else "cpu" elif isinstance(gpu_item, int): if gpu_item >= gpu_count: raise ValueError( f"There are {gpu_count} GPUs available. Provide a valid GPU index. You provided: {gpu_item}" ) return gpu_item if gpu_available else "cpu" else: raise ValueError(f"Invalid gpu type: {type(gpu_item)}. Must be bool, str, or int.") if isinstance(gpu, list): seen_indices = set() result = [] for item in gpu: device = _get_single_device(item) if isinstance(device, int): if device not in seen_indices: seen_indices.add(device) result.append(device) else: result.append(device) return result[0] if len(result) == 1 else result else: return _get_single_device(gpu) def slice_embeddings(embeddings: NDArray, num_sentences: NumSentencesType) -> EmbeddingSlicesType: """ Slice embeddings into segments based on the provided number of sentences per segment. Args: - embeddings (np.ndarray): The array of embeddings to be sliced. - num_sentences (Union[List[int], List[List[int]]]): - If a list of integers: Specifies the number of embeddings to take in each slice. - If a list of lists of integers: Specifies multiple nested levels of slicing. Returns: - List[np.ndarray]: A list of numpy arrays where each array represents a slice of embeddings. Raises: - TypeError: If `num_sentences` is not of type List[int] or List[List[int]]. Example Usage: ```python embeddings = np.random.rand(10, 5) num_sentences = [3, 2, 5] result = slice_embeddings(embeddings, num_sentences) # `result` will be a list of numpy arrays: # [embeddings[:3], embeddings[3:5], embeddings[5:]] num_sentences_nested = [[2, 1], [3, 4]] result_nested = slice_embeddings(embeddings, num_sentences_nested) # `result_nested` will be a nested list of numpy arrays: # [[embeddings[:2], embeddings[2:3]], [embeddings[3:6], embeddings[6:]]] slice_embeddings(embeddings, "invalid") # Raises a TypeError ``` """ def _slice_embeddings(s_idx: int, n_sentences: List[int]): """ Helper function to slice embeddings starting from index `s_idx`. Args: - s_idx (int): Starting index for slicing. - n_sentences (List[int]): List specifying number of sentences in each slice. Returns: - Tuple[List[np.ndarray], int]: A tuple containing a list of sliced embeddings and the next starting index. """ _result = [] for count in n_sentences: _result.append(embeddings[s_idx:s_idx + count]) s_idx += count return _result, s_idx if isinstance(num_sentences, list) and all(isinstance(item, int) for item in num_sentences): result, _ = _slice_embeddings(0, num_sentences) return result elif isinstance(num_sentences, list) and all( isinstance(sublist, list) and all( isinstance(item, int) for item in sublist ) for sublist in num_sentences ): nested_result = [] start_idx = 0 for nested_num_sentences in num_sentences: embedding_slice, start_idx = _slice_embeddings(start_idx, nested_num_sentences) nested_result.append(embedding_slice) return nested_result else: raise TypeError(f"Incorrect Type for {num_sentences=}") def is_nested_list_of_type(lst_obj, element_type, depth: int) -> Tuple[bool, str]: """ Check if the given object is a nested list of a specific type up to a specified depth. Args: - lst_obj: The object to check, expected to be a list or a single element. - element_type: The type that each element in the nested list should match. - depth (int): The depth of nesting to check. Must be non-negative. Returns: - Tuple[bool, str]: A tuple containing: - A boolean indicating if lst_obj is a nested list of the specified type up to the given depth. - A string containing an error message if the check fails, or an empty string if the check passes. Raises: - ValueError: If depth is negative. Example: ```python # Test cases is_nested_list_of_type("test", str, 0) # Returns (True, "") is_nested_list_of_type([1, 2, 3], str, 0) # Returns (False, "Element is of type int, expected type str.") is_nested_list_of_type(["apple", "banana"], str, 1) # Returns (True, "") is_nested_list_of_type([[1, 2], [3, 4]], int, 2) # Returns (True, "") is_nested_list_of_type([[1, 2], ["a", "b"]], int, 2) # Returns (False, "Element at index 1 is of incorrect type.") is_nested_list_of_type([[[1], [2]], [[3], [4]]], int, 3) # Returns (True, "") ``` Explanation: - The function checks if `lst_obj` is a nested list of elements of type `element_type` up to `depth` levels deep. - If `depth` is 0, it checks if `lst_obj` itself is of type `element_type`. - If `depth` is greater than 0, it recursively checks each level of nesting to ensure all elements match `element_type`. - Returns a tuple containing a boolean and an error message. The boolean is `True` if `lst_obj` matches the criteria, `False` otherwise. The error message provides details if the check fails. - Raises a `ValueError` if `depth` is negative, as depth must be a non-negative integer. """ orig_depth = depth def _is_nested_list_of_type(lst_o, e_type, d) -> Tuple[bool, str]: if d == 0: if isinstance(lst_o, e_type): return True, "" else: return False, f"Element is of type {type(lst_o).__name__}, expected type {e_type.__name__}." elif d > 0: if isinstance(lst_o, list): for i, item in enumerate(lst_o): is_valid, err = _is_nested_list_of_type(item, e_type, d - 1) if not is_valid: msg = f"Element at index {i} has incorrect type.\n{err}" if d == orig_depth else err return False, msg return True, "" else: return False, f"Object is not a list but {type(lst_o)}." else: raise ValueError("Depth can't be negative") return _is_nested_list_of_type(lst_obj, element_type, depth) def flatten_list(nested_list: list) -> list: """ Recursively flattens a nested list of any depth. Parameters: nested_list (list): The nested list to flatten. Returns: list: A flat list containing all the elements of the nested list. """ flat_list = [] for item in nested_list: if isinstance(item, list): flat_list.extend(flatten_list(item)) else: flat_list.append(item) return flat_list def compute_f1(p: float, r: float, eps=sys.float_info.epsilon) -> float: """ Computes F1 value :param p: Precision Value :param r: Recall Value :param eps: Epsilon Value :return: """ f1 = 2 * p * r / (p + r + eps) return f1 def sent_tokenize(text: str) -> List[str]: """ Tokenizes the input text into a list of sentences. This function uses the NLTK library's sentence tokenizer to split the input text into individual sentences. Leading and trailing whitespace is removed from the input text before tokenization. If the input text is empty or consists only of whitespace, a list containing an empty string is returned. Args: text (str): The input text to be tokenized into sentences. Returns: List[str]: A list of sentences tokenized from the input text. """ text = text.strip() if text == "": return [""] return [sent.strip() for sent in nltk.tokenize.sent_tokenize(text)] @dataclass class Scores: """ Data class representing evaluation scores including precision, recall, and computed F1 score. Attributes: - precision (float): The precision score for the evaluation. - recall (List[float]): List of recall scores for each reference - f1 (float): Computed F1 score based on the precision and mean recall values. """ precision: float recall: List[float] f1: float = field(init=False) def __post_init__(self): self.f1 = compute_f1(self.precision, statistics.fmean(self.recall))